Carg19064 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg19064
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description50S ribosomal protein L15, chloroplastic-like
LocationCarg_Chr18: 10066756 .. 10069928 (+)
RNA-Seq ExpressionCarg19064
SyntenyCarg19064
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGGAGGGGAACGGGACGACAACTGTTAAGAGTCTGTAAGCACTGGCTTTCATCCATGGCGGCTTTTCTTTCCTTATCTTCAATTTCTTTGACCAGAACGGCCACTGTTCTTCCTCATTCAACCACTTCCTTCAAGGTAGTTCTCGATTACTTTATTGAAAATTGCAGATGTTAGTTCAGTTCAAATTTCAAGTGATTTGATGCTTTTATCATTCACGAAACTCTAATTCTTTACATTTCCAGGGAAATGTGAGGCTATTGAACTCAAATCCGTTTAATATTTGTTCATCTAGACTCAAATTCACGGTCGCAGATGGGAAACGATTGGTTGTTCGCAGCCAGGCTGCTGCGGCTTCCCTGTCTGCTTCGTCCGGTGAGAGTGTGCGGTTCCGTCTCGATAATCTTGGACCGCAGGTAGGTTCGAGGAAGAAGGCGAAGAGGAAGGGGAGAGGTATATCGGCGGGACAGGGAGGTAGCTGTGGGTTTGGAATGAGAGGACAGAAATCAAGGTCTGGACCGGGTGTGAGAAGAGGATTTGAAGGTGGACAAATGCCTCTTTATCGGAGAATCCCTAAACTTCGAGGAATTGCTGGAGGTAATCTCCAACCTTTGTAATTCTTATCATTCTACTGGTTGCTTTATGTGTATGAATTGTAGAGCTCTACGTATCTGGCTGTTAGGCGTCTGCAATGGCTAATTCTGCTATAGGTTGTTGTTTCTTCATTGAGAGACAGTTCAAATTTATTTTAAGCTGTTTAGTGTTTAGAGGTTGTTTTGACAATGTCTGCCTCTTTGTGAGATTCCTTGTCTGTTGGGGAGGAGAACGAAACATTCTTTATAAGAGTGTGGAAGCCTCATCCTAGCACACGCGTTTAAAAACATGAGGGGAAGTCCGAAAGGGAAATCCCAAAGAGGACAATATCTACTAACGGTGGGCTTTGGCTGTTATAAATGATATCAAATCCAGACACCGAGTAGTGTGCCAACGAGGATGTATAGCCCTGAAGGGGGGTGGACACCGAGTGGTGTGCCAGCGAGGACCCTGGGTCCCGAAGGAGGGTGGATTGTGAGATCCTACTTCGATTGGAGAGAGAGGAACGAGTGCCAGCGAGGATGCTGGGCCCTGAAGGAGGTGGATTGTGAGATCCCATATTGTTTGGAGTGGAGAACAAAACATTATTTAGAAGGGTGTGGAAATTTTTCCTAGCAGACGCATTTTAAAAACCTTGAGGGGAAACCCGAAAGGGAAGGCTAAAAAAAGACAATATTTGCTAGCGGTGGGCTTGGAGACCATTTGCTATTAGTTGTTTGGACTTGTTCTACTCGTAATATTGTGTAATTCCTTCGACCTGGAACGAAGAACATTCAGCCCTGTTAGATTTTTAGGAGTGTAGGACTAGTGAGACAAGCTTTCACTCTCCAAGTGGACGTCCTTCTCCCTGTTACACCATAATTATAGTGTTTGGGCTGAGTGATTAGGAAGCTGTAATGGTTTATGATGATGCTTCTTCCAGTATTCTACTAAGTGGGAGAGAGTTTATCTCCAAACTGGATATGAGAGGTTGTTAATTTTATGTGAGATCTCACATCGATTGGAGAGGGGAACAAAGCACTCCTTATAAGGGTGTGGAAACCCCTAGTAGACGCGTTTTAAAACCGTGAGGCTGACGGCGATACATAATGAGCCGAAGCAAACAATATTTGCTAGCGGTGAACTTTAGCTGTTACAGATTGAGAAATAGATAATCAATTAACACGAAAGAATGACGAAATATCTAATAGGATTAAATGCGAATAAAATGTACTTATGAAAGCGTCTAGATGGAATACACCATCCATGGACCCAATAAATGAACTCCCGAACATAATGTCTTGTATAGTATTAGTATACTTGCCTTGTCCTTGTTACTAAGGTCAGAATGTTTAGTTTATCATCACAGGTTGAGAGGTACTTCAATCTAATGTATGAACGTATTTTGTGATTTCCTCGACGTGTTTCTCTTCTCATTTCTTACTCTTTCTTTTCACTAAAAAACGTTCTAAGACGATACGTTGTGTATTACATTTGTCTTTTTCGTGGTTTCGTTTATATCAACTAATGATATTCGAGCTAAACAATTGTTTTTTCTTTCAAGGTATGCATGCTGGGTTACCTAAATATGTGCCGGTGAATTTGAAAGACATTGAAGCGGCAGGATTTCAGGAAGGGGAACAGGTCACCTTGGAAACTTTGAAGGAGAAGGGTCTAATCAACCCTTCGGGAAGAGAAAGGAAACTCCCATTAAAGGTACTAATGTCACGTGTATCTACATTGTGAGGATAGCAAATATCAAAATGGACCTTATGGTGCACTTTCCTAAATTTTTTGCCTAATTCTTCTTTTGTCGATCGACTCAAATAGATAAATCTGGTTATATTTCATCTCCTCGACAAGTTTAGTGTAACAGCCCAAACTCACTGCAAACAAATAGCCAAATATTGTCTTCTTTGGACTTTTCCTTTCGGGCTTCCCTTCAAAGTTTTAAAACGCGTCTACTAAGAAGAGATTTTCGCATCCTTATAAGGAATGATTCGTTTCGCATCCTTATAAGGAATTATTCGTTTCCCTCTCCAACCAATGCGGGACCTCACATTTAGTAATAGGTATGTGCAATCAACATGAATTCAGGACAGCTATTCAAAATCCTAGTGGAAGATTGGATCTGTTATCTCATATTTGCTTTTTTCGTGAAAAAATATACCAATTGAAGTGGACTTCTTGAGTTGGGTCACTATTCAATCTCACTAAGTCATGGTAACTGATTGATAATTGCTGGGCTTTGTATTTCCTTCAGATTTTAGCTGATGGGGAGCTGAGTGTGAAGCTAAATATTAAAGCTCGGGCTTTTTCATCAGCAGCAAAAGAGAAGCTTGAGGCTGCTGGCTGCACCCTTACTGTATTACCTGGACGAAAGAAGTGGGTCAAGCCATCAGTGGCTAAGAACCTCGCTCGAGCAGAAGAATATTTTGCAAAGAAAAGGGCTGCAGCAGCTGCTGCAGAACAAGCTACCGCATGAATGCTTGTGTAAAGTTGCAGTTTGGTGACAAATTCCAGGTTAAATCTCTTCCATTGTAATTTGATTGTATTATTGGTTAACTTCAAGAGCAAATTTTGCTTCTCTGAAAATGTTGATG

mRNA sequence

CGGAGGGGAACGGGACGACAACTGTTAAGAGTCTGTAAGCACTGGCTTTCATCCATGGCGGCTTTTCTTTCCTTATCTTCAATTTCTTTGACCAGAACGGCCACTGTTCTTCCTCATTCAACCACTTCCTTCAAGGGAAATGTGAGGCTATTGAACTCAAATCCGTTTAATATTTGTTCATCTAGACTCAAATTCACGGTCGCAGATGGGAAACGATTGGTTGTTCGCAGCCAGGCTGCTGCGGCTTCCCTGTCTGCTTCGTCCGGTGAGAGTGTGCGGTTCCGTCTCGATAATCTTGGACCGCAGGTAGGTTCGAGGAAGAAGGCGAAGAGGAAGGGGAGAGGTATATCGGCGGGACAGGGAGGTAGCTGTGGGTTTGGAATGAGAGGACAGAAATCAAGGTCTGGACCGGGTGTGAGAAGAGGATTTGAAGGTGGACAAATGCCTCTTTATCGGAGAATCCCTAAACTTCGAGGAATTGCTGGAGGTATGCATGCTGGGTTACCTAAATATGTGCCGGTGAATTTGAAAGACATTGAAGCGGCAGGATTTCAGGAAGGGGAACAGGTCACCTTGGAAACTTTGAAGGAGAAGGGTCTAATCAACCCTTCGGGAAGAGAAAGGAAACTCCCATTAAAGATTTTAGCTGATGGGGAGCTGAGTGTGAAGCTAAATATTAAAGCTCGGGCTTTTTCATCAGCAGCAAAAGAGAAGCTTGAGGCTGCTGGCTGCACCCTTACTGTATTACCTGGACGAAAGAAGTGGGTCAAGCCATCAGTGGCTAAGAACCTCGCTCGAGCAGAAGAATATTTTGCAAAGAAAAGGGCTGCAGCAGCTGCTGCAGAACAAGCTACCGCATGAATGCTTGTGTAAAGTTGCAGTTTGGTGACAAATTCCAGGTTAAATCTCTTCCATTGTAATTTGATTGTATTATTGGTTAACTTCAAGAGCAAATTTTGCTTCTCTGAAAATGTTGATG

Coding sequence (CDS)

ATGGCGGCTTTTCTTTCCTTATCTTCAATTTCTTTGACCAGAACGGCCACTGTTCTTCCTCATTCAACCACTTCCTTCAAGGGAAATGTGAGGCTATTGAACTCAAATCCGTTTAATATTTGTTCATCTAGACTCAAATTCACGGTCGCAGATGGGAAACGATTGGTTGTTCGCAGCCAGGCTGCTGCGGCTTCCCTGTCTGCTTCGTCCGGTGAGAGTGTGCGGTTCCGTCTCGATAATCTTGGACCGCAGGTAGGTTCGAGGAAGAAGGCGAAGAGGAAGGGGAGAGGTATATCGGCGGGACAGGGAGGTAGCTGTGGGTTTGGAATGAGAGGACAGAAATCAAGGTCTGGACCGGGTGTGAGAAGAGGATTTGAAGGTGGACAAATGCCTCTTTATCGGAGAATCCCTAAACTTCGAGGAATTGCTGGAGGTATGCATGCTGGGTTACCTAAATATGTGCCGGTGAATTTGAAAGACATTGAAGCGGCAGGATTTCAGGAAGGGGAACAGGTCACCTTGGAAACTTTGAAGGAGAAGGGTCTAATCAACCCTTCGGGAAGAGAAAGGAAACTCCCATTAAAGATTTTAGCTGATGGGGAGCTGAGTGTGAAGCTAAATATTAAAGCTCGGGCTTTTTCATCAGCAGCAAAAGAGAAGCTTGAGGCTGCTGGCTGCACCCTTACTGTATTACCTGGACGAAAGAAGTGGGTCAAGCCATCAGTGGCTAAGAACCTCGCTCGAGCAGAAGAATATTTTGCAAAGAAAAGGGCTGCAGCAGCTGCTGCAGAACAAGCTACCGCATGA

Protein sequence

MAAFLSLSSISLTRTATVLPHSTTSFKGNVRLLNSNPFNICSSRLKFTVADGKRLVVRSQAAAASLSASSGESVRFRLDNLGPQVGSRKKAKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRRGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEQVTLETLKEKGLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCTLTVLPGRKKWVKPSVAKNLARAEEYFAKKRAAAAAAEQATA
Homology
[Close]
BLAST of Carg19064 vs. NCBI nr
Match: XP_022945908.1 (50S ribosomal protein L15, chloroplastic-like [Cucurbita moschata] >XP_022945909.1 50S ribosomal protein L15, chloroplastic-like [Cucurbita moschata] >KAG6573957.1 50S ribosomal protein L15, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013021.1 50S ribosomal protein L15, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 497.7 bits (1280), Expect = 6.4e-137
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0 

Query: 1   MAAFLSLSSISLTRTATVLPHSTTSFKGNVRLLNSNPFNICSSRLKFTVADGKRLVVRSQ 60
           MAAFLSLSSISLTRTATVLPHSTTSFKGNVRLLNSNPFNICSSRLKFTVADGKRLVVRSQ
Sbjct: 1   MAAFLSLSSISLTRTATVLPHSTTSFKGNVRLLNSNPFNICSSRLKFTVADGKRLVVRSQ 60

Query: 61  AAAASLSASSGESVRFRLDNLGPQVGSRKKAKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAAASLSASSGESVRFRLDNLGPQVGSRKKAKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAAASLSASSGESVRFRLDNLGPQVGSRKKAKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRRGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEQVTLETLKEK 180
           VRRGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEQVTLETLKEK
Sbjct: 121 VRRGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEQVTLETLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCTLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCTLTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCTLTVLPGRKKWVKP 240

Query: 241 SVAKNLARAEEYFAKKRAAAAAAEQATA 269
           SVAKNLARAEEYFAKKRAAAAAAEQATA
Sbjct: 241 SVAKNLARAEEYFAKKRAAAAAAEQATA 268

[Close]
BLAST of Carg19064 vs. NCBI nr
Match: XP_022968128.1 (50S ribosomal protein L15, chloroplastic-like [Cucurbita maxima] >XP_022968129.1 50S ribosomal protein L15, chloroplastic-like [Cucurbita maxima] >XP_022968130.1 50S ribosomal protein L15, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 495.4 bits (1274), Expect = 3.2e-136
Identity = 267/268 (99.63%), Postives = 267/268 (99.63%), Query Frame = 0 

Query: 1   MAAFLSLSSISLTRTATVLPHSTTSFKGNVRLLNSNPFNICSSRLKFTVADGKRLVVRSQ 60
           MAAFLSLSSISLTRTATVLPHSTTSFKGNVRLLNSNPFNICSSRLKFTVADGKRLVVRSQ
Sbjct: 1   MAAFLSLSSISLTRTATVLPHSTTSFKGNVRLLNSNPFNICSSRLKFTVADGKRLVVRSQ 60

Query: 61  AAAASLSASSGESVRFRLDNLGPQVGSRKKAKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAAASLSASSGESVRFRLDNLGPQ GSRKKAKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAAASLSASSGESVRFRLDNLGPQSGSRKKAKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRRGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEQVTLETLKEK 180
           VRRGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEQVTLETLKEK
Sbjct: 121 VRRGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEQVTLETLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCTLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCTLTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCTLTVLPGRKKWVKP 240

Query: 241 SVAKNLARAEEYFAKKRAAAAAAEQATA 269
           SVAKNLARAEEYFAKKRAAAAAAEQATA
Sbjct: 241 SVAKNLARAEEYFAKKRAAAAAAEQATA 268

[Close]
BLAST of Carg19064 vs. NCBI nr
Match: XP_023541041.1 (50S ribosomal protein L15, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023541042.1 50S ribosomal protein L15, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 490.7 bits (1262), Expect = 7.9e-135
Identity = 264/268 (98.51%), Postives = 266/268 (99.25%), Query Frame = 0 

Query: 1   MAAFLSLSSISLTRTATVLPHSTTSFKGNVRLLNSNPFNICSSRLKFTVADGKRLVVRSQ 60
           MAAFLSLSSISLTRTATVLPHSTTSFKGNVRLLNSNPFNICSSRLKFTVADGKRLVV SQ
Sbjct: 1   MAAFLSLSSISLTRTATVLPHSTTSFKGNVRLLNSNPFNICSSRLKFTVADGKRLVVCSQ 60

Query: 61  AAAASLSASSGESVRFRLDNLGPQVGSRKKAKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAAASLS SSGESVRFRLDNLGPQVGSRKKAKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAAASLSGSSGESVRFRLDNLGPQVGSRKKAKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRRGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEQVTLETLKEK 180
           VR+GFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEQVTLETLKEK
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEQVTLETLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCTLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCTLTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCTLTVLPGRKKWVKP 240

Query: 241 SVAKNLARAEEYFAKKRAAAAAAEQATA 269
           SVAKNLARAEEYFAKKRAAAAAAEQAT+
Sbjct: 241 SVAKNLARAEEYFAKKRAAAAAAEQATS 268

[Close]
BLAST of Carg19064 vs. NCBI nr
Match: XP_022984826.1 (50S ribosomal protein L15, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 439.9 bits (1130), Expect = 1.6e-119
Identity = 237/266 (89.10%), Postives = 248/266 (93.23%), Query Frame = 0 

Query: 1   MAAFLSLSSISLTRTATVLPHSTTSFKGNVRLLNSNPFNICSSRLKFTVADGKRLVVRSQ 60
           MAA LSLSS SLTRTA  LPH TTSFKGNV++LNS  F+  S +LKF V DGK LVVRSQ
Sbjct: 1   MAALLSLSSSSLTRTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFKVGDGKPLVVRSQ 60

Query: 61  AAAASLSASSGESVRFRLDNLGPQVGSRKKAKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAA+SLSAS  ESVRFRLDNLGPQ GSRKK KRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRRGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEQVTLETLKEK 180
           VR+GFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGE+V+LE+LKEK
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCTLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEA GC+LTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 240

Query: 241 SVAKNLARAEEYFAKKRAAAAAAEQA 267
           SVAKNLARA+EYFAKKRAAAAAAEQA
Sbjct: 241 SVAKNLARADEYFAKKRAAAAAAEQA 266

[Close]
BLAST of Carg19064 vs. NCBI nr
Match: XP_022956924.1 (50S ribosomal protein L15, chloroplastic-like [Cucurbita moschata] >KAG6601285.1 50S ribosomal protein L15, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032073.1 50S ribosomal protein L15, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 436.0 bits (1120), Expect = 2.3e-118
Identity = 235/266 (88.35%), Postives = 246/266 (92.48%), Query Frame = 0 

Query: 1   MAAFLSLSSISLTRTATVLPHSTTSFKGNVRLLNSNPFNICSSRLKFTVADGKRLVVRSQ 60
           MAA LSLSS SLTRTA  LPH TT FKGNV++LNS  F+    +LKF V DGK LVVRSQ
Sbjct: 1   MAALLSLSSSSLTRTAIALPHPTTPFKGNVKILNSKQFSFSPLKLKFKVGDGKPLVVRSQ 60

Query: 61  AAAASLSASSGESVRFRLDNLGPQVGSRKKAKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAA+SLSAS  ESVRFRLDNLGPQ GSRKK KRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRRGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEQVTLETLKEK 180
           VR+GFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGE+V+LE+LKEK
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCTLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEA GC+LTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 240

Query: 241 SVAKNLARAEEYFAKKRAAAAAAEQA 267
           SVAKNLARA+EYFAKKRAAAAAAEQA
Sbjct: 241 SVAKNLARADEYFAKKRAAAAAAEQA 266

[Close]
BLAST of Carg19064 vs. ExPASy Swiss-Prot
Match: P25873 (50S ribosomal protein L15, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL15 PE=1 SV=2)

HSP 1 Score: 339.7 bits (870), Expect = 2.9e-92
Identity = 195/270 (72.22%), Postives = 217/270 (80.37%), Query Frame = 0 

Query: 1   MAAFLSLSSISLT-RTATVLPHSTTSFKGNVRLLNSNPFNICSSRLKFTVAD------GK 60
           MA  LS+SS  LT R    L  S+TSFKGNV +L +NP  I S +L  T+         +
Sbjct: 1   MATPLSISSNPLTSRHCYRLHLSSTSFKGNVSVLGANPSQILSLKLNQTLKTRNQQQFAR 60

Query: 61  RLVVRSQAAAASLSASSGESVRFRLDNLGPQVGSRKKAKRKGRGISAGQGGSCGFGMRGQ 120
            LVV SQ AA S +  + E  RFRLDNLGPQ GSRKK KRKGRGISAGQG SCGFGMRGQ
Sbjct: 61  PLVVVSQTAATSSAVVAPE--RFRLDNLGPQPGSRKKQKRKGRGISAGQGASCGFGMRGQ 120

Query: 121 KSRSGPGVRRGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEQVT 180
           KSRSGPG+ RGFEGGQ  LYRR+PKLRGIAGGM +GLPKY+PVN+KDIE AGFQEG++V+
Sbjct: 121 KSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEVS 180

Query: 181 LETLKEKGLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCTLTVLPG 240
           LETLK+KGLINPSGRERKLPLKIL  GELS+KL  KARAFS+ AKEKLEA+GCTLTVLPG
Sbjct: 181 LETLKQKGLINPSGRERKLPLKILGTGELSMKLTFKARAFSTQAKEKLEASGCTLTVLPG 240

Query: 241 RKKWVKPSVAKNLARAEEYFAKKRAAAAAA 264
           RKKWVKPSVAKN ARA+EYFAKKRAAAA A
Sbjct: 241 RKKWVKPSVAKNQARADEYFAKKRAAAAEA 268

[Close]
BLAST of Carg19064 vs. ExPASy Swiss-Prot
Match: P22798 (50S ribosomal protein L15, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL15 PE=1 SV=3)

HSP 1 Score: 332.8 bits (852), Expect = 3.6e-90
Identity = 183/271 (67.53%), Postives = 219/271 (80.81%), Query Frame = 0 

Query: 1   MAAFLSLSSISLTRTATVLPHSTTSFKGNVRLLNSNPFNICSSRL---KFTVADGKRLVV 60
           MA+ LSLSS +   TA    + +++FKGN+     NPFN    +L        +  RLVV
Sbjct: 1   MASLLSLSS-TPPSTANSNNYPSSTFKGNINNFRINPFNFAPLKLHLRNIVKKESTRLVV 60

Query: 61  RSQAAAASLSAS--SGESVRFRLDNLGPQVGSRKKAKRKGRGISAGQGGSCGFGMRGQKS 120
            + A+++++S S  SG   RFRLDNLGPQ GSRKK KRKGRG +AGQGGSCGFGMRGQKS
Sbjct: 61  VASASSSNVSPSIGSGSETRFRLDNLGPQPGSRKKGKRKGRGHAAGQGGSCGFGMRGQKS 120

Query: 121 RSGPGVRRGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEQVTLE 180
           RSGPG+ RGFEGGQMPLYRRIPKLRGIAGGM AGLPKYVP+NL+DIE AGF+EGE+V+LE
Sbjct: 121 RSGPGIMRGFEGGQMPLYRRIPKLRGIAGGMRAGLPKYVPINLRDIEVAGFKEGEEVSLE 180

Query: 181 TLKEKGLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCTLTVLPGRK 240
           +LK KG+INPSGRER+LPLKIL +GELS KL IKARAFS +AKEKLEAAGC++TVLPGRK
Sbjct: 181 SLKAKGIINPSGRERRLPLKILGEGELSTKLQIKARAFSGSAKEKLEAAGCSVTVLPGRK 240

Query: 241 KWVKPSVAKNLARAEEYFAKKRAAAAAAEQA 267
           K++K SV KNLARA+EYFAKKRAA+A+  ++
Sbjct: 241 KYIKESVRKNLARADEYFAKKRAASASEAES 270

[Close]
BLAST of Carg19064 vs. ExPASy Swiss-Prot
Match: P31165 (50S ribosomal protein L15, chloroplastic (Fragment) OS=Pisum sativum OX=3888 GN=RPL15 PE=2 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 2.6e-88
Identity = 184/260 (70.77%), Postives = 211/260 (81.15%), Query Frame = 0 

Query: 7   LSSISLTRTATVLPHSTTSFKGNVRLLNSNPFNICSSRLKFTVADGKRLVVRSQAAAASL 66
           +S+ SL   ++ LP   + FKGNV+ L + P      +++ T     R+ V ++AA+A  
Sbjct: 1   MSAASLIPVSS-LPSLASPFKGNVKTLVAKPCLCPCLKIQRTKL---RVSVVNKAASAYN 60

Query: 67  SASSGESVRFRLDNLGPQVGSRKKAKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRRGFE 126
             SSGE+VRFRLDNLGPQ GSRK+ KRKGRGI+AGQG SCGFGMRGQKSRSGPG+ RGFE
Sbjct: 61  VKSSGENVRFRLDNLGPQPGSRKRPKRKGRGIAAGQGASCGFGMRGQKSRSGPGIMRGFE 120

Query: 127 GGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEQVTLETLKEKGLINPS 186
           GGQMPLYRR+PKLRGIAGGMHAGLPKYV VNL DIE AGFQ+GE+V+LETLK K +INPS
Sbjct: 121 GGQMPLYRRLPKLRGIAGGMHAGLPKYVNVNLTDIENAGFQDGEEVSLETLKAKRVINPS 180

Query: 187 GRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCTLTVLPGRKKWVKPSVAKNL 246
           GRERKLPLKILADGELS KL IKA AFS++AKEKLE AGC+L VLPGRKKWVKPSVAKNL
Sbjct: 181 GRERKLPLKILADGELSKKLTIKAGAFSTSAKEKLEYAGCSLIVLPGRKKWVKPSVAKNL 240

Query: 247 ARAEEYFAKKRAAAAAAEQA 267
           ARAEEYFAKKR    A+E A
Sbjct: 241 ARAEEYFAKKRGGETASEPA 256

[Close]
BLAST of Carg19064 vs. ExPASy Swiss-Prot
Match: P31160 (50S ribosomal protein L15 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=rplO PE=3 SV=2)

HSP 1 Score: 139.0 bits (349), Expect = 7.6e-32
Identity = 82/158 (51.90%), Postives = 108/158 (68.35%), Query Frame = 0 

Query: 77  RLDNLGPQVGSRKKAKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRRGFEGGQMPLYRRI 136
           +LDNL PQ G++K+ +R GRGI+AGQG SCGFGMRGQKSRSG   R GFEGGQMPLYRR+
Sbjct: 2   KLDNLAPQPGAKKRKRRVGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRV 61

Query: 137 PKLRGIAGGMHAGLPK---YVPVNLKDIEAAGFQEGEQVTLETLKEKGLINPSGRERKLP 196
           PKL+      H  L     Y  VN+  +  AG   G +VTLE+L   G++     +   P
Sbjct: 62  PKLK------HFPLINRKFYTVVNVGAL--AGLAAGTEVTLESLMAVGIVT----QNDGP 121

Query: 197 LKILADGELSVKLNIKARAFSSAAKEKLEAAGCTLTVL 232
           LKIL DGELSV L++ A AF++ A++K+EAAG ++ ++
Sbjct: 122 LKILGDGELSVSLSVSAAAFTATAQQKIEAAGGSIALV 147

[Close]
BLAST of Carg19064 vs. ExPASy Swiss-Prot
Match: Q5N0U8 (50S ribosomal protein L15 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=rplO PE=3 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 7.6e-32
Identity = 82/158 (51.90%), Postives = 108/158 (68.35%), Query Frame = 0 

Query: 77  RLDNLGPQVGSRKKAKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRRGFEGGQMPLYRRI 136
           +LDNL PQ G++K+ +R GRGI+AGQG SCGFGMRGQKSRSG   R GFEGGQMPLYRR+
Sbjct: 2   KLDNLAPQPGAKKRKRRVGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRV 61

Query: 137 PKLRGIAGGMHAGLPK---YVPVNLKDIEAAGFQEGEQVTLETLKEKGLINPSGRERKLP 196
           PKL+      H  L     Y  VN+  +  AG   G +VTLE+L   G++     +   P
Sbjct: 62  PKLK------HFPLINRKFYTVVNVGAL--AGLAAGTEVTLESLMAVGIVT----QNDGP 121

Query: 197 LKILADGELSVKLNIKARAFSSAAKEKLEAAGCTLTVL 232
           LKIL DGELSV L++ A AF++ A++K+EAAG ++ ++
Sbjct: 122 LKILGDGELSVSLSVSAAAFTATAQQKIEAAGGSIALV 147

[Close]
BLAST of Carg19064 vs. ExPASy TrEMBL
Match: A0A6J1G297 (50S ribosomal protein L15, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111450012 PE=3 SV=1)

HSP 1 Score: 497.7 bits (1280), Expect = 3.1e-137
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0 

Query: 1   MAAFLSLSSISLTRTATVLPHSTTSFKGNVRLLNSNPFNICSSRLKFTVADGKRLVVRSQ 60
           MAAFLSLSSISLTRTATVLPHSTTSFKGNVRLLNSNPFNICSSRLKFTVADGKRLVVRSQ
Sbjct: 1   MAAFLSLSSISLTRTATVLPHSTTSFKGNVRLLNSNPFNICSSRLKFTVADGKRLVVRSQ 60

Query: 61  AAAASLSASSGESVRFRLDNLGPQVGSRKKAKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAAASLSASSGESVRFRLDNLGPQVGSRKKAKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAAASLSASSGESVRFRLDNLGPQVGSRKKAKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRRGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEQVTLETLKEK 180
           VRRGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEQVTLETLKEK
Sbjct: 121 VRRGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEQVTLETLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCTLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCTLTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCTLTVLPGRKKWVKP 240

Query: 241 SVAKNLARAEEYFAKKRAAAAAAEQATA 269
           SVAKNLARAEEYFAKKRAAAAAAEQATA
Sbjct: 241 SVAKNLARAEEYFAKKRAAAAAAEQATA 268

[Close]
BLAST of Carg19064 vs. ExPASy TrEMBL
Match: A0A6J1HWB7 (50S ribosomal protein L15, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111467457 PE=3 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 1.5e-136
Identity = 267/268 (99.63%), Postives = 267/268 (99.63%), Query Frame = 0 

Query: 1   MAAFLSLSSISLTRTATVLPHSTTSFKGNVRLLNSNPFNICSSRLKFTVADGKRLVVRSQ 60
           MAAFLSLSSISLTRTATVLPHSTTSFKGNVRLLNSNPFNICSSRLKFTVADGKRLVVRSQ
Sbjct: 1   MAAFLSLSSISLTRTATVLPHSTTSFKGNVRLLNSNPFNICSSRLKFTVADGKRLVVRSQ 60

Query: 61  AAAASLSASSGESVRFRLDNLGPQVGSRKKAKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAAASLSASSGESVRFRLDNLGPQ GSRKKAKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAAASLSASSGESVRFRLDNLGPQSGSRKKAKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRRGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEQVTLETLKEK 180
           VRRGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEQVTLETLKEK
Sbjct: 121 VRRGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEQVTLETLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCTLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCTLTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCTLTVLPGRKKWVKP 240

Query: 241 SVAKNLARAEEYFAKKRAAAAAAEQATA 269
           SVAKNLARAEEYFAKKRAAAAAAEQATA
Sbjct: 241 SVAKNLARAEEYFAKKRAAAAAAEQATA 268

[Close]
BLAST of Carg19064 vs. ExPASy TrEMBL
Match: A0A6J1J6D0 (50S ribosomal protein L15, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111482969 PE=3 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 7.7e-120
Identity = 237/266 (89.10%), Postives = 248/266 (93.23%), Query Frame = 0 

Query: 1   MAAFLSLSSISLTRTATVLPHSTTSFKGNVRLLNSNPFNICSSRLKFTVADGKRLVVRSQ 60
           MAA LSLSS SLTRTA  LPH TTSFKGNV++LNS  F+  S +LKF V DGK LVVRSQ
Sbjct: 1   MAALLSLSSSSLTRTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFKVGDGKPLVVRSQ 60

Query: 61  AAAASLSASSGESVRFRLDNLGPQVGSRKKAKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAA+SLSAS  ESVRFRLDNLGPQ GSRKK KRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRRGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEQVTLETLKEK 180
           VR+GFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGE+V+LE+LKEK
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCTLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEA GC+LTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 240

Query: 241 SVAKNLARAEEYFAKKRAAAAAAEQA 267
           SVAKNLARA+EYFAKKRAAAAAAEQA
Sbjct: 241 SVAKNLARADEYFAKKRAAAAAAEQA 266

[Close]
BLAST of Carg19064 vs. ExPASy TrEMBL
Match: A0A6J1H0G5 (50S ribosomal protein L15, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111458464 PE=3 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 1.1e-118
Identity = 235/266 (88.35%), Postives = 246/266 (92.48%), Query Frame = 0 

Query: 1   MAAFLSLSSISLTRTATVLPHSTTSFKGNVRLLNSNPFNICSSRLKFTVADGKRLVVRSQ 60
           MAA LSLSS SLTRTA  LPH TT FKGNV++LNS  F+    +LKF V DGK LVVRSQ
Sbjct: 1   MAALLSLSSSSLTRTAIALPHPTTPFKGNVKILNSKQFSFSPLKLKFKVGDGKPLVVRSQ 60

Query: 61  AAAASLSASSGESVRFRLDNLGPQVGSRKKAKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAA+SLSAS  ESVRFRLDNLGPQ GSRKK KRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRRGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEQVTLETLKEK 180
           VR+GFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGE+V+LE+LKEK
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCTLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEA GC+LTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 240

Query: 241 SVAKNLARAEEYFAKKRAAAAAAEQA 267
           SVAKNLARA+EYFAKKRAAAAAAEQA
Sbjct: 241 SVAKNLARADEYFAKKRAAAAAAEQA 266

[Close]
BLAST of Carg19064 vs. ExPASy TrEMBL
Match: A0A1S3BFG1 (50S ribosomal protein L15, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489288 PE=3 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 2.7e-117
Identity = 231/268 (86.19%), Postives = 247/268 (92.16%), Query Frame = 0 

Query: 1   MAAFLSLSSISLTRTATVLPHSTTSFKGNVRLLNSNPFNICSSRLKFTVADGKRLVVRSQ 60
           MAA  SLSS SLTRTAT LP+ TTSFKGNV +LNS   +I S +LKF   DGK LVVR+Q
Sbjct: 1   MAALFSLSSTSLTRTATALPYPTTSFKGNVSILNSKHLSISSPKLKFKAVDGKHLVVRNQ 60

Query: 61  AAAASLSASSGESVRFRLDNLGPQVGSRKKAKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAA+SL AS  ++VRFRLDNLGPQ GSRK+ KRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLYASPADNVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRRGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEQVTLETLKEK 180
           VR+GFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIE AGFQEGE+V+LETLKEK
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEK 180

Query: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCTLTVLPGRKKWVKP 240
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGC+LTVLPGRKKWVKP
Sbjct: 181 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 240

Query: 241 SVAKNLARAEEYFAKKRAAAAAAEQATA 269
           SVAKNLARAEEYFAKK+AAAAAAEQ++A
Sbjct: 241 SVAKNLARAEEYFAKKKAAAAAAEQSSA 268

[Close]
BLAST of Carg19064 vs. TAIR 10
Match: AT3G25920.1 (ribosomal protein L15 )

HSP 1 Score: 339.7 bits (870), Expect = 2.1e-93
Identity = 195/270 (72.22%), Postives = 217/270 (80.37%), Query Frame = 0 

Query: 1   MAAFLSLSSISLT-RTATVLPHSTTSFKGNVRLLNSNPFNICSSRLKFTVAD------GK 60
           MA  LS+SS  LT R    L  S+TSFKGNV +L +NP  I S +L  T+         +
Sbjct: 1   MATPLSISSNPLTSRHCYRLHLSSTSFKGNVSVLGANPSQILSLKLNQTLKTRNQQQFAR 60

Query: 61  RLVVRSQAAAASLSASSGESVRFRLDNLGPQVGSRKKAKRKGRGISAGQGGSCGFGMRGQ 120
            LVV SQ AA S +  + E  RFRLDNLGPQ GSRKK KRKGRGISAGQG SCGFGMRGQ
Sbjct: 61  PLVVVSQTAATSSAVVAPE--RFRLDNLGPQPGSRKKQKRKGRGISAGQGASCGFGMRGQ 120

Query: 121 KSRSGPGVRRGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEQVT 180
           KSRSGPG+ RGFEGGQ  LYRR+PKLRGIAGGM +GLPKY+PVN+KDIE AGFQEG++V+
Sbjct: 121 KSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEVS 180

Query: 181 LETLKEKGLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCTLTVLPG 240
           LETLK+KGLINPSGRERKLPLKIL  GELS+KL  KARAFS+ AKEKLEA+GCTLTVLPG
Sbjct: 181 LETLKQKGLINPSGRERKLPLKILGTGELSMKLTFKARAFSTQAKEKLEASGCTLTVLPG 240

Query: 241 RKKWVKPSVAKNLARAEEYFAKKRAAAAAA 264
           RKKWVKPSVAKN ARA+EYFAKKRAAAA A
Sbjct: 241 RKKWVKPSVAKNQARADEYFAKKRAAAAEA 268

[Close]
BLAST of Carg19064 vs. TAIR 10
Match: AT5G64670.1 (Ribosomal protein L18e/L15 superfamily protein )

HSP 1 Score: 64.3 bits (155), Expect = 1.7e-10
Identity = 54/144 (37.50%), Postives = 79/144 (54.86%), Query Frame = 0 

Query: 88  RKKAKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRRGFEGGQMPLYRRIPKLRGIAGGMH 147
           RK   RKGRGI +G+G + G G +GQK+R    ++ GFEGGQ PL RR+PK RG      
Sbjct: 75  RKLKTRKGRGIGSGKGKTAGRGHKGQKARG--TMKFGFEGGQTPLRRRLPK-RGFKNKFK 134

Query: 148 AGLPKYVPVNL----KDIEAAGFQEGEQVTLETLKEKGLINPSGRERKLPLKILADGELS 207
                + PV L    K I A      E +T++TLK+ G I   G++ +  ++++  G   
Sbjct: 135 L---HFQPVGLGKIAKLINAGKIDSHELITMKTLKDVGAI---GKQIEDGVRLMGRGADD 194

Query: 208 VK--LNIKARAFSSAAKEKLEAAG 226
           +K  L+ +    +  AKE +EAAG
Sbjct: 195 IKWPLHFEVSRVTVRAKEVVEAAG 209

The following BLAST results are available for this feature:
BLAST of Carg19064 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022945908.16.4e-137100.0050S ribosomal protein L15, chloroplastic-like [Cucurbita moschata] >XP_022945909... [more]
XP_022968128.13.2e-13699.6350S ribosomal protein L15, chloroplastic-like [Cucurbita maxima] >XP_022968129.1... [more]
XP_023541041.17.9e-13598.5150S ribosomal protein L15, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_0... [more]
XP_022984826.11.6e-11989.1050S ribosomal protein L15, chloroplastic-like [Cucurbita maxima][more]
XP_022956924.12.3e-11888.3550S ribosomal protein L15, chloroplastic-like [Cucurbita moschata] >KAG6601285.1... [more]
BLAST of Carg19064 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P258732.9e-9272.2250S ribosomal protein L15, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL1... [more]
P227983.6e-9067.5350S ribosomal protein L15, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL15 P... [more]
P311652.6e-8870.7750S ribosomal protein L15, chloroplastic (Fragment) OS=Pisum sativum OX=3888 GN=... [more]
P311607.6e-3251.9050S ribosomal protein L15 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-80... [more]
Q5N0U87.6e-3251.9050S ribosomal protein L15 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / S... [more]
BLAST of Carg19064 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1G2973.1e-137100.0050S ribosomal protein L15, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=L... [more]
A0A6J1HWB71.5e-13699.6350S ribosomal protein L15, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A6J1J6D07.7e-12089.1050S ribosomal protein L15, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A6J1H0G51.1e-11888.3550S ribosomal protein L15, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=L... [more]
A0A1S3BFG12.7e-11786.1950S ribosomal protein L15, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489288... [more]
BLAST of Carg19064 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G25920.12.1e-9372.22ribosomal protein L15 [more]
AT5G64670.11.7e-1037.50Ribosomal protein L18e/L15 superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005749Ribosomal protein L15, bacterial-typeTIGRFAMTIGR01071TIGR01071coord: 78..228
e-value: 2.6E-39
score: 132.3
IPR005749Ribosomal protein L15, bacterial-typePANTHERPTHR1293450S RIBOSOMAL PROTEIN L15coord: 13..263
NoneNo IPR availableGENE3D3.100.10.10coord: 153..230
e-value: 3.4E-20
score: 73.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..126
NoneNo IPR availablePANTHERPTHR12934:SF13BNAA06G33230D PROTEINcoord: 13..263
IPR021131Ribosomal protein L18e/L15PPFAMPF00828Ribosomal_L27Acoord: 102..229
e-value: 4.0E-31
score: 108.4
IPR001196Ribosomal protein L15, conserved sitePROSITEPS00475RIBOSOMAL_L15coord: 195..225
IPR030878Ribosomal protein L15HAMAPMF_01341Ribosomal_L15coord: 78..231
score: 18.389219
IPR036227Ribosomal L18e/L15P superfamilySUPERFAMILY52080Ribosomal proteins L15p and L18ecoord: 80..230

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg19064-RACarg19064-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003729 mRNA binding
molecular_function GO:0003735 structural constituent of ribosome