Carg18995 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCATAATAGCATCTTCTCTGCAAGAAATCTTGCCAACAGGTTAGTACACCAATTTTTCTCTCATTATATGCTCATATTTTTGTGACACAAATTTTCTGCTTAAATAAGACGGGATTTATAAGTTCATTTATTGTATTTATTCTTTTTAAAATAAATTATGTAAAAGGAAGTTATTAAAAAGTAAAATGAGATAAACCATAAAAGTCTGTAAAGACAAAGTTGCATAATGAGTCAAAAAAAGACCTGAAATAAAGTGTGCAGTCCGTAAACGACATTCGGATGAATGAAGATAGAATAATAAAAAGATGAATAGAAGAATACAGGTATCTTTTAATGTCAAAATAATGAATATATAAATCAAATAAAGTTTAATATTCTATGGAAAGATATATAGATAACGTTTAATAAAGAAAATAAATATATAAATCATGTTAAATAAAGAAAATAAATATACAAATCAAGTTTAATAGAGAAAATAAATCTATAAATAAATTTTAATAAAGAAAATAAATATATAAATAAAGTTTAGTAAAGAAAATAAAAATAAAAATAAAAATAAAGAAAATAAATATACATGTAAATTTTAATAGAGAAAATAAATCTATAAATAAACTTTAATATAATCGTTTTGAGTTTTTTTTTTTTTTTAAATAAAAGTTGTTATTATTACGATTACTATTATATCTATTTTAATTAGAATAAACTCCAAATCGATAATAAAAATTAATATTAATATTCAAATATAAAAATTAAAATTAAATATTTTAATGTACAAAACACCAAAAATATAATGGGTCTCGAGACGGAGATCATCAGAATAATATTTTAAAATGAAGAAACTTACGCTGAAATGTAAACTTTAAAAAATGAAGGGAAAAAAAGTAATAAAACGAAATTTATTATATCCTCATTCCTAAACCAGATTCCATATGCATGCAGAGTCCAATTGCCACCAGAAAACTAACACAGAAAAACATGGCGAAGATGGGGCTACTAACCAGATTGGCAGAAGAAACAGTGCATGTGCGATCACCGTTTCTCAGGCGGTTGCTCATGGAGGTGGTGCAAGGGGAGGTGGTGCCAGGGGAGGTGGTGCCAGCAGAGGTGGTGCCAGGGGAGGTGGTGGTGTTAGTAGTCCTCATACAGGAGGTAGTGCCGTAATCCCCATTTACGTAGCTGGTTCAGCGCAAGCACAACGCCGCCGAGGTCGACCAGTCAATGCAGGAACTCGCCATGAGAACAACATGTGGCTTCTGGTAGCTGCAGCTTTGGCTGCCATTGCACATCTGTAA ATGGCCATAATAGCATCTTCTCTGCAAGAAATCTTGCCAACAGAGTCCAATTGCCACCAGAAAACTAACACAGAAAAACATGGCGAAGATGGGGCTACTAACCAGATTGGCAGAAGAAACAGTGCATGTGCGATCACCGTTTCTCAGGCGGTTGCTCATGGAGGTGGTGCAAGGGGAGGTGGTGCCAGGGGAGGTGGTGCCAGCAGAGGTGGTGCCAGGGGAGGTGGTGGTGTTAGTAGTCCTCATACAGGAGGTAGTGCCGTAATCCCCATTTACGTAGCTGGTTCAGCGCAAGCACAACGCCGCCGAGGTCGACCAGTCAATGCAGGAACTCGCCATGAGAACAACATGTGGCTTCTGGTAGCTGCAGCTTTGGCTGCCATTGCACATCTGTAA ATGGCCATAATAGCATCTTCTCTGCAAGAAATCTTGCCAACAGAGTCCAATTGCCACCAGAAAACTAACACAGAAAAACATGGCGAAGATGGGGCTACTAACCAGATTGGCAGAAGAAACAGTGCATGTGCGATCACCGTTTCTCAGGCGGTTGCTCATGGAGGTGGTGCAAGGGGAGGTGGTGCCAGGGGAGGTGGTGCCAGCAGAGGTGGTGCCAGGGGAGGTGGTGGTGTTAGTAGTCCTCATACAGGAGGTAGTGCCGTAATCCCCATTTACGTAGCTGGTTCAGCGCAAGCACAACGCCGCCGAGGTCGACCAGTCAATGCAGGAACTCGCCATGAGAACAACATGTGGCTTCTGGTAGCTGCAGCTTTGGCTGCCATTGCACATCTGTAA MAIIASSLQEILPTESNCHQKTNTEKHGEDGATNQIGRRNSACAITVSQAVAHGGGARGGGARGGGASRGGARGGGGVSSPHTGGSAVIPIYVAGSAQAQRRRGRPVNAGTRHENNMWLLVAAALAAIAHL Homology
BLAST of Carg18995 vs. NCBI nr
Match: KAG7012953.1 (hypothetical protein SDJN02_25707, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 241.1 bits (614), Expect = 5.3e-60 Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0
BLAST of Carg18995 vs. NCBI nr
Match: XP_022945097.1 (uncharacterized protein LOC111449437 isoform X1 [Cucurbita moschata]) HSP 1 Score: 219.2 bits (557), Expect = 2.2e-53 Identity = 121/131 (92.37%), Postives = 121/131 (92.37%), Query Frame = 0
BLAST of Carg18995 vs. NCBI nr
Match: XP_022945098.1 (uncharacterized protein LOC111449437 isoform X2 [Cucurbita moschata]) HSP 1 Score: 210.7 bits (535), Expect = 7.7e-51 Identity = 116/131 (88.55%), Postives = 116/131 (88.55%), Query Frame = 0
BLAST of Carg18995 vs. NCBI nr
Match: KAG6573889.1 (hypothetical protein SDJN03_27776, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 198.4 bits (503), Expect = 3.9e-47 Identity = 110/117 (94.02%), Postives = 110/117 (94.02%), Query Frame = 0
BLAST of Carg18995 vs. NCBI nr
Match: XP_022968347.1 (uncharacterized protein LOC111467612 isoform X2 [Cucurbita maxima]) HSP 1 Score: 193.4 bits (490), Expect = 1.3e-45 Identity = 111/129 (86.05%), Postives = 112/129 (86.82%), Query Frame = 0
BLAST of Carg18995 vs. ExPASy TrEMBL
Match: A0A6J1G000 (uncharacterized protein LOC111449437 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449437 PE=4 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 1.0e-53 Identity = 121/131 (92.37%), Postives = 121/131 (92.37%), Query Frame = 0
BLAST of Carg18995 vs. ExPASy TrEMBL
Match: A0A6J1FZV5 (uncharacterized protein LOC111449437 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111449437 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 3.7e-51 Identity = 116/131 (88.55%), Postives = 116/131 (88.55%), Query Frame = 0
BLAST of Carg18995 vs. ExPASy TrEMBL
Match: A0A6J1HTB9 (uncharacterized protein LOC111467612 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467612 PE=4 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 6.1e-46 Identity = 111/129 (86.05%), Postives = 112/129 (86.82%), Query Frame = 0
BLAST of Carg18995 vs. ExPASy TrEMBL
Match: A0A6J1HUL7 (uncharacterized protein LOC111467612 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467612 PE=4 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 1.8e-45 Identity = 113/130 (86.92%), Postives = 114/130 (87.69%), Query Frame = 0
BLAST of Carg18995 vs. ExPASy TrEMBL
Match: A0A6J1JB47 (uncharacterized protein LOC111485159 OS=Cucurbita maxima OX=3661 GN=LOC111485159 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 2.5e-23 Identity = 78/130 (60.00%), Postives = 90/130 (69.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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