Carg18976 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18976
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein of unknown function (DUF1677)
Location	Carg_Chr17: 5999243 .. 6000364 (+)
RNA-Seq Expression	Carg18976
Synteny	Carg18976

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTTCATCTGTGAAATTTCGTCATCCGATGAAGATGAAGGAATCGGTGAGAAGGAGAGATAGCAATAAAAGAAGCCGCGAAATTAGGCGGAGGGAGAAGGAAATCTTTTAATATCTGTTTTATCTGCTTTCTTGGTAAGATGTCTTCTCGATTTTCTCTTTTCGTATTCGAATTAGGAATTTCGAAATTTCTAGGGTTCTTCGTTGTTTATAGACAATATTGCAATCGTTTCGTAATATGGAACTCTGTTTTGAACATATAGTTCCAGATTCTGTTTGCAGAGTCGTGATTTCTGCAATCCTTCTCATCGTTACCTAAAGCGAAATATCGAAATTTCTAGGGTTTTTTCGATGTTATAGATAAGTAATACGGTCGTTTGGTTTGTGGAACGCGGTTTTGATATCACGATTTCAGTTTCTGTCTGCAGAATCGCCATGTCTGCCACCGTTCTTAGCGATACAATCCTAGAACCTCAAGCAGCATCGACGAAGCTAATCGCTCATATGGAGGTGGAGTTCGTTAAATGCTATTGCTGCGGACTCATAGAGGAATGCACACCAGCATACATACAACGTGTTCGTGAACGTTACAATGAACATTGGATCTGCGGCCTCTGTTCCGAGGCAATCAACTACGAAATCCTCCGTTCTCGAAGCCTAATCACGGCGGAGGAAGCCATGGAAATACACATGAACCTCTGCAAAAAATTCACAGCGTTGAAACCACCTCCAAATCCTGCGGTGCATTTGATATCAGCGATGCGACAGATTTTGAAGCGCAGTTTAGATTCTCCCTCAAGGGCCGTGAGGTCGATGCCAACAAGTCCGATGAAGAAAGCCTCTCGCCCGCCGCCACTCGCTCGCACGGGAAGCTGCCTATCTTCCCTCTCTGGTTCGTGAATCATCAAAGGTACAGGATTCCATGGACCAACAAAACTCAATCAAAACTAAACATATTGGGATCCAATAATACTTTATATTCCATAAACATAGACCTTATCATAGGCTGAATTATACAATACGCTTCGTGATGCCTGGTTTTTTTGTTTTTGTCATAATTGGCAAAATTCTAACCATTTTCCTTGTGTAATTTAGCTTGAATATTAATAAAAGTTGAAT

mRNA sequence

ATGGTTTTCATCTGTGAAATTTCGTCATCCGATGAAGATGAAGGAATCGTTTCTGTCTGCAGAATCGCCATGTCTGCCACCGTTCTTAGCGATACAATCCTAGAACCTCAAGCAGCATCGACGAAGCTAATCGCTCATATGGAGGTGGAGTTCGTTAAATGCTATTGCTGCGGACTCATAGAGGAATGCACACCAGCATACATACAACGTGTTCGTGAACGTTACAATGAACATTGGATCTGCGGCCTCTGTTCCGAGGCAATCAACTACGAAATCCTCCGTTCTCGAAGCCTAATCACGGCGGAGGAAGCCATGGAAATACACATGAACCTCTGCAAAAAATTCACAGCGTTGAAACCACCTCCAAATCCTGCGGTGCATTTGATATCAGCGATGCGACAGATTTTGAAGCGCAGTTTAGATTCTCCCTCAAGGGCCGTGAGGTCGATGCCAACAAGTCCGATGAAGAAAGCCTCTCGCCCGCCGCCACTCGCTCGCACGGGAAGCTGCCTATCTTCCCTCTCTGGTTCGTGAATCATCAAAGGTACAGGATTCCATGGACCAACAAAACTCAATCAAAACTAAACATATTGGGATCCAATAATACTTTATATTCCATAAACATAGACCTTATCATAGGCTGAATTATACAATACGCTTCGTGATGCCTGGTTTTTTTGTTTTTGTCATAATTGGCAAAATTCTAACCATTTTCCTTGTGTAATTTAGCTTGAATATTAATAAAAGTTGAAT

Coding sequence (CDS)

ATGGTTTTCATCTGTGAAATTTCGTCATCCGATGAAGATGAAGGAATCGTTTCTGTCTGCAGAATCGCCATGTCTGCCACCGTTCTTAGCGATACAATCCTAGAACCTCAAGCAGCATCGACGAAGCTAATCGCTCATATGGAGGTGGAGTTCGTTAAATGCTATTGCTGCGGACTCATAGAGGAATGCACACCAGCATACATACAACGTGTTCGTGAACGTTACAATGAACATTGGATCTGCGGCCTCTGTTCCGAGGCAATCAACTACGAAATCCTCCGTTCTCGAAGCCTAATCACGGCGGAGGAAGCCATGGAAATACACATGAACCTCTGCAAAAAATTCACAGCGTTGAAACCACCTCCAAATCCTGCGGTGCATTTGATATCAGCGATGCGACAGATTTTGAAGCGCAGTTTAGATTCTCCCTCAAGGGCCGTGAGGTCGATGCCAACAAGTCCGATGAAGAAAGCCTCTCGCCCGCCGCCACTCGCTCGCACGGGAAGCTGCCTATCTTCCCTCTCTGGTTCGTGA

Protein sequence

MVFICEISSSDEDEGIVSVCRIAMSATVLSDTILEPQAASTKLIAHMEVEFVKCYCCGLIEECTPAYIQRVRERYNEHWICGLCSEAINYEILRSRSLITAEEAMEIHMNLCKKFTALKPPPNPAVHLISAMRQILKRSLDSPSRAVRSMPTSPMKKASRPPPLARTGSCLSSLSGS

Homology

[Close]

BLAST of Carg18976 vs. NCBI nr
Match: KAG7013981.1 (hypothetical protein SDJN02_24151, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 349.4 bits (895), Expect = 1.9e-92
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MVFICEISSSDEDEGIVSVCRIAMSATVLSDTILEPQAASTKLIAHMEVEFVKCYCCGLI 60
           MVFICEISSSDEDEGIVSVCRIAMSATVLSDTILEPQAASTKLIAHMEVEFVKCYCCGLI
Sbjct: 1   MVFICEISSSDEDEGIVSVCRIAMSATVLSDTILEPQAASTKLIAHMEVEFVKCYCCGLI 60

Query: 61  EECTPAYIQRVRERYNEHWICGLCSEAINYEILRSRSLITAEEAMEIHMNLCKKFTALKP 120
           EECTPAYIQRVRERYNEHWICGLCSEAINYEILRSRSLITAEEAMEIHMNLCKKFTALKP
Sbjct: 61  EECTPAYIQRVRERYNEHWICGLCSEAINYEILRSRSLITAEEAMEIHMNLCKKFTALKP 120

Query: 121 PPNPAVHLISAMRQILKRSLDSPSRAVRSMPTSPMKKASRPPPLARTGSCLSSLSGS 178
           PPNPAVHLISAMRQILKRSLDSPSRAVRSMPTSPMKKASRPPPLARTGSCLSSLSGS
Sbjct: 121 PPNPAVHLISAMRQILKRSLDSPSRAVRSMPTSPMKKASRPPPLARTGSCLSSLSGS 177

[Close]

BLAST of Carg18976 vs. NCBI nr
Match: KAG6575437.1 (hypothetical protein SDJN03_26076, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 306.6 bits (784), Expect = 1.4e-79
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 24  MSATVLSDTILEPQAASTKLIAHMEVEFVKCYCCGLIEECTPAYIQRVRERYNEHWICGL 83
           MSATVLSDTILEPQAASTKLIAHMEVEFVKCYCCGLIEECTPAYIQRVRERYNEHWICGL
Sbjct: 1   MSATVLSDTILEPQAASTKLIAHMEVEFVKCYCCGLIEECTPAYIQRVRERYNEHWICGL 60

Query: 84  CSEAINYEILRSRSLITAEEAMEIHMNLCKKFTALKPPPNPAVHLISAMRQILKRSLDSP 143
           CSEAINYEILRSRSLITAEEAMEIHMNLCKKFTALKPPPNPAVHLISAMRQILKRSLDSP
Sbjct: 61  CSEAINYEILRSRSLITAEEAMEIHMNLCKKFTALKPPPNPAVHLISAMRQILKRSLDSP 120

Query: 144 SRAVRSMPTSPMKKASRPPPLARTGSCLSSLSGS 178
           SRAVRSMPTSPMKKASRPPPLARTGSCLSSLSGS
Sbjct: 121 SRAVRSMPTSPMKKASRPPPLARTGSCLSSLSGS 154

[Close]

BLAST of Carg18976 vs. NCBI nr
Match: KAG7025898.1 (hypothetical protein SDJN02_12396, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 274.6 bits (701), Expect = 5.8e-70
Identity = 141/177 (79.66%), Postives = 154/177 (87.01%), Query Frame = 0


Query: 1   MVFICEISSSDEDEGIVSVCRIAMSATVLSDTILEPQAASTKLIAHMEVEFVKCYCCGLI 60
           MVF+CEISS+D++EG   + R  MSATVLSD+I+EPQ AST LI HME EFVKCYCCGL 
Sbjct: 1   MVFLCEISSTDDEEGKFCL-RNHMSATVLSDSIIEPQTASTTLIVHMEAEFVKCYCCGLT 60

Query: 61  EECTPAYIQRVRERYNEHWICGLCSEAINYEILRSRSLITAEEAMEIHMNLCKKFTALKP 120
           EECTPAYI+RVRERYN +WICGLCSEAINYEILRS  LITAEEAME HMNLCKKFTALKP
Sbjct: 61  EECTPAYIERVRERYNGNWICGLCSEAINYEILRSGRLITAEEAMENHMNLCKKFTALKP 120

Query: 121 PPNPAVHLISAMRQILKRSLDSPSRAVRSMPTSPMKKASRPPPLARTGSCLSSLSGS 178
           PPNP VHLI+AMRQILKRSLDSPSR +RSMP SP KK SR P L+R+ SCLSSLSGS
Sbjct: 121 PPNPTVHLITAMRQILKRSLDSPSRGLRSMPASPTKKNSRLPSLSRSESCLSSLSGS 176

[Close]

BLAST of Carg18976 vs. NCBI nr
Match: XP_038896664.1 (uncharacterized protein LOC120084928 [Benincasa hispida] >XP_038896665.1 uncharacterized protein LOC120084928 [Benincasa hispida] >XP_038896666.1 uncharacterized protein LOC120084928 [Benincasa hispida])

HSP 1 Score: 260.4 bits (664), Expect = 1.1e-65
Identity = 133/155 (85.81%), Postives = 140/155 (90.32%), Query Frame = 0


Query: 24  MSATVLSDTILEPQAASTKLIAHMEVEFVKCYCCGLIEECTPAYIQRVRERYNEHWICGL 83
           MSATVLSDTILEPQ ASTKLIAHME EFV+C CCGL EECTPAYI+RVRERY+ +WICGL
Sbjct: 1   MSATVLSDTILEPQTASTKLIAHMEAEFVRCDCCGLKEECTPAYIERVRERYSGNWICGL 60

Query: 84  CSEAINYEILRSRSLITAEEAMEIHMNLCKKFTALKPPPNPAVHLISAMRQILKRSLDSP 143
           CSEAINYEILRS SLITAEEAME HM LCKKFTALKPPPNP VHLI+AMRQILKRSLDSP
Sbjct: 61  CSEAINYEILRSDSLITAEEAMENHMKLCKKFTALKPPPNPTVHLITAMRQILKRSLDSP 120

Query: 144 -SRAVRSMPTSPMKKASRPPPLARTGSCLSSLSGS 178
            SRA+RSMPTSP KK SRPP L RTGSC SS+SGS
Sbjct: 121 SSRALRSMPTSPTKKGSRPPALTRTGSCFSSISGS 155

[Close]

BLAST of Carg18976 vs. NCBI nr
Match: XP_004141709.1 (uncharacterized protein LOC101205671 [Cucumis sativus] >KGN45478.1 hypothetical protein Csa_016282 [Cucumis sativus])

HSP 1 Score: 260.4 bits (664), Expect = 1.1e-65
Identity = 133/155 (85.81%), Postives = 139/155 (89.68%), Query Frame = 0


Query: 24  MSATVLSDTILEPQAASTKLIAHMEVEFVKCYCCGLIEECTPAYIQRVRERYNEHWICGL 83
           MSATVLSDTILEPQ ASTKLI HME EFVKC CCGL EECTPAYI+RVRERY+ +WICGL
Sbjct: 1   MSATVLSDTILEPQTASTKLIVHMEAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGL 60

Query: 84  CSEAINYEILRSRSLITAEEAMEIHMNLCKKFTALKPPPNPAVHLISAMRQILKRSLDSP 143
           CSEAI YEILRS SLITAEEAME HMNLCKKFT+LKPPPNP VHLI+AMRQILKRSLDSP
Sbjct: 61  CSEAIKYEILRSDSLITAEEAMENHMNLCKKFTSLKPPPNPTVHLITAMRQILKRSLDSP 120

Query: 144 -SRAVRSMPTSPMKKASRPPPLARTGSCLSSLSGS 178
            SRA+RSMPTSP KK SRPP L RTGSC SSLSGS
Sbjct: 121 SSRALRSMPTSPTKKGSRPPALTRTGSCFSSLSGS 155

[Close]

BLAST of Carg18976 vs. ExPASy TrEMBL
Match: A0A0A0K7Q6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448890 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 5.5e-66
Identity = 133/155 (85.81%), Postives = 139/155 (89.68%), Query Frame = 0


Query: 24  MSATVLSDTILEPQAASTKLIAHMEVEFVKCYCCGLIEECTPAYIQRVRERYNEHWICGL 83
           MSATVLSDTILEPQ ASTKLI HME EFVKC CCGL EECTPAYI+RVRERY+ +WICGL
Sbjct: 1   MSATVLSDTILEPQTASTKLIVHMEAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGL 60

Query: 84  CSEAINYEILRSRSLITAEEAMEIHMNLCKKFTALKPPPNPAVHLISAMRQILKRSLDSP 143
           CSEAI YEILRS SLITAEEAME HMNLCKKFT+LKPPPNP VHLI+AMRQILKRSLDSP
Sbjct: 61  CSEAIKYEILRSDSLITAEEAMENHMNLCKKFTSLKPPPNPTVHLITAMRQILKRSLDSP 120

Query: 144 -SRAVRSMPTSPMKKASRPPPLARTGSCLSSLSGS 178
            SRA+RSMPTSP KK SRPP L RTGSC SSLSGS
Sbjct: 121 SSRALRSMPTSPTKKGSRPPALTRTGSCFSSLSGS 155

[Close]

BLAST of Carg18976 vs. ExPASy TrEMBL
Match: A0A6J1DKE6 (uncharacterized protein LOC111021346 OS=Momordica charantia OX=3673 GN=LOC111021346 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.6e-65
Identity = 132/155 (85.16%), Postives = 142/155 (91.61%), Query Frame = 0


Query: 24  MSATVLSDTILEPQAASTKLIAHMEVEFVKCYCCGLIEECTPAYIQRVRERYNEHWICGL 83
           MSATVLSDTILE   AS KLIAHMEVEFVKC CCGL EECTPAYI+RVRERYN +WICGL
Sbjct: 1   MSATVLSDTILESATASAKLIAHMEVEFVKCDCCGLSEECTPAYIERVRERYNGNWICGL 60

Query: 84  CSEAINYEILRSRSLITAEEAMEIHMNLCKKFTALKPPPNPAVHLISAMRQILKRSLDSP 143
           CSEAINYEILRS SLITAEEAME HM LCKKFT+LKPPPNPAVHLI+AMRQILKRS+DSP
Sbjct: 61  CSEAINYEILRSDSLITAEEAMESHMKLCKKFTSLKPPPNPAVHLIAAMRQILKRSMDSP 120

Query: 144 -SRAVRSMPTSPMKKASRPPPLARTGSCLSSLSGS 178
            +RA+RSMP+SP KK+SRPPPLAR+GSCLSSLS S
Sbjct: 121 QTRALRSMPSSPTKKSSRPPPLARSGSCLSSLSAS 155

[Close]

BLAST of Carg18976 vs. ExPASy TrEMBL
Match: A0A6J1HLD2 (uncharacterized protein LOC111464570 OS=Cucurbita moschata OX=3662 GN=LOC111464570 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 3.6e-65
Identity = 129/154 (83.77%), Postives = 137/154 (88.96%), Query Frame = 0


Query: 24  MSATVLSDTILEPQAASTKLIAHMEVEFVKCYCCGLIEECTPAYIQRVRERYNEHWICGL 83
           MSATVLSD+I+EPQ AST LI HME EFVKCYCCGL EECTPAYI+RVRERYN +WICGL
Sbjct: 1   MSATVLSDSIIEPQTASTTLIVHMEAEFVKCYCCGLTEECTPAYIERVRERYNRNWICGL 60

Query: 84  CSEAINYEILRSRSLITAEEAMEIHMNLCKKFTALKPPPNPAVHLISAMRQILKRSLDSP 143
           CSEAINYEILRS  LITAEEAME HMNLCKKFTALKPPPNP VHLI+AMRQILKRSLDSP
Sbjct: 61  CSEAINYEILRSGRLITAEEAMENHMNLCKKFTALKPPPNPTVHLITAMRQILKRSLDSP 120

Query: 144 SRAVRSMPTSPMKKASRPPPLARTGSCLSSLSGS 178
           SR +RSMP SP KK SR P L+R+ SCLSSLSGS
Sbjct: 121 SRGLRSMPASPTKKNSRLPSLSRSESCLSSLSGS 154

[Close]

BLAST of Carg18976 vs. ExPASy TrEMBL
Match: A0A5D3BWR1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001340 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.3e-64
Identity = 134/156 (85.90%), Postives = 139/156 (89.10%), Query Frame = 0


Query: 24  MSATVLSDTILEPQAASTKLIAHMEVEFVKCYCCGLIEECTPAYIQRVRERYNEHWICGL 83
           MSATVLSDTILEPQ ASTKLI HME EFVKC CCGL EECTPAYI+RVRERY+ +WICGL
Sbjct: 1   MSATVLSDTILEPQTASTKLIVHMEAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGL 60

Query: 84  CSEAINYEILRSRSLITAEEAMEIHMNLCKKFTALKPPPNPAVHLISAMRQILKRSLDSP 143
           CSEAINYEILRS SLITAEEAME HMNLCKKFTALKPPPNP VHLI+AMRQILKRSLDSP
Sbjct: 61  CSEAINYEILRSDSLITAEEAMENHMNLCKKFTALKPPPNPTVHLITAMRQILKRSLDSP 120

Query: 144 -SRAVRSMPTSPMKKASR-PPPLARTGSCLSSLSGS 178
            SRA+RSMPTSP KK SR PP L RTGS  SSLSGS
Sbjct: 121 SSRALRSMPTSPTKKGSRVPPALTRTGSFFSSLSGS 156

[Close]

BLAST of Carg18976 vs. ExPASy TrEMBL
Match: A0A1S3CGK0 (uncharacterized protein LOC103500683 OS=Cucumis melo OX=3656 GN=LOC103500683 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.3e-64
Identity = 134/156 (85.90%), Postives = 139/156 (89.10%), Query Frame = 0


Query: 24  MSATVLSDTILEPQAASTKLIAHMEVEFVKCYCCGLIEECTPAYIQRVRERYNEHWICGL 83
           MSATVLSDTILEPQ ASTKLI HME EFVKC CCGL EECTPAYI+RVRERY+ +WICGL
Sbjct: 1   MSATVLSDTILEPQTASTKLIVHMEAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGL 60

Query: 84  CSEAINYEILRSRSLITAEEAMEIHMNLCKKFTALKPPPNPAVHLISAMRQILKRSLDSP 143
           CSEAINYEILRS SLITAEEAME HMNLCKKFTALKPPPNP VHLI+AMRQILKRSLDSP
Sbjct: 61  CSEAINYEILRSDSLITAEEAMENHMNLCKKFTALKPPPNPTVHLITAMRQILKRSLDSP 120

Query: 144 -SRAVRSMPTSPMKKASR-PPPLARTGSCLSSLSGS 178
            SRA+RSMPTSP KK SR PP L RTGS  SSLSGS
Sbjct: 121 SSRALRSMPTSPTKKGSRVPPALTRTGSFFSSLSGS 156

[Close]

BLAST of Carg18976 vs. TAIR 10
Match: AT1G72510.1 (Protein of unknown function (DUF1677) )

HSP 1 Score: 152.1 bits (383), Expect = 4.1e-37
Identity = 85/166 (51.20%), Postives = 107/166 (64.46%), Query Frame = 0


Query: 24  MSATVLSD--------TILEPQAASTKLIAHMEVEFVKCYCCGLIEECTPAYIQRVRERY 83
           MSA+VLSD         ++     S   I+  E + V C CCGL EECT +YI+ VRERY
Sbjct: 1   MSASVLSDPTMLISTPEVILVSPVSVTQISGDEPDSVTCDCCGLTEECTQSYIEMVRERY 60

Query: 84  NEHWICGLCSEAINYEILRSRSLITAEEAMEIHMNLCKKFTALKPPPNPAVHLISAMRQI 143
              WICGLCSEA+ YE++R++ L+T EEAM  HMN+C KF +  PPPNP  HLISAMRQI
Sbjct: 61  MGKWICGLCSEAVKYEVMRTKRLLTTEEAMARHMNMCNKFKSSSPPPNPTGHLISAMRQI 120

Query: 144 LKRSLDSPSRAVRSMPTSPMKKASR------PPPLARTGSCLSSLS 176
           L++SLDSP R +RSMP SP K             L+R+ SC +SL+
Sbjct: 121 LRKSLDSP-RMLRSMPNSPSKDDQDHHHDCVSNVLSRSDSCFASLT 165

[Close]

BLAST of Carg18976 vs. TAIR 10
Match: AT1G72510.2 (Protein of unknown function (DUF1677) )

HSP 1 Score: 152.1 bits (383), Expect = 4.1e-37
Identity = 85/166 (51.20%), Postives = 107/166 (64.46%), Query Frame = 0


Query: 24  MSATVLSD--------TILEPQAASTKLIAHMEVEFVKCYCCGLIEECTPAYIQRVRERY 83
           MSA+VLSD         ++     S   I+  E + V C CCGL EECT +YI+ VRERY
Sbjct: 1   MSASVLSDPTMLISTPEVILVSPVSVTQISGDEPDSVTCDCCGLTEECTQSYIEMVRERY 60

Query: 84  NEHWICGLCSEAINYEILRSRSLITAEEAMEIHMNLCKKFTALKPPPNPAVHLISAMRQI 143
              WICGLCSEA+ YE++R++ L+T EEAM  HMN+C KF +  PPPNP  HLISAMRQI
Sbjct: 61  MGKWICGLCSEAVKYEVMRTKRLLTTEEAMARHMNMCNKFKSSSPPPNPTGHLISAMRQI 120

Query: 144 LKRSLDSPSRAVRSMPTSPMKKASR------PPPLARTGSCLSSLS 176
           L++SLDSP R +RSMP SP K             L+R+ SC +SL+
Sbjct: 121 LRKSLDSP-RMLRSMPNSPSKDDQDHHHDCVSNVLSRSDSCFASLT 165

[Close]

BLAST of Carg18976 vs. TAIR 10
Match: AT2G09970.1 (Protein of unknown function (DUF1677) )

HSP 1 Score: 125.2 bits (313), Expect = 5.3e-29
Identity = 76/167 (45.51%), Postives = 100/167 (59.88%), Query Frame = 0


Query: 24  MSATVLSDTILEPQAASTKLIAHM--------EVEFVKCYCCGLIEECTPAYIQRVRERY 83
           MS +VLSD  +        +I+ +        E++ V C CCGL +ECT +Y + +RERY
Sbjct: 1   MSDSVLSDPTMLISTPDVIIISTVPVTQISSDELDSVTCDCCGLTDECTESYTEMIRERY 60

Query: 84  NEHWICGLCSEAINYEILRS-RSLITAEEAMEIHMNLCKKFTALKPPPNPAVHLISAMRQ 143
              WI G CSEA+ Y+++R+ R L T EEAM  HMN C KF +  PP N   HLISAMRQ
Sbjct: 61  IGKWISGFCSEAVKYKVMRTKRFLTTEEEAMARHMNKCNKFKSSSPPSNLTRHLISAMRQ 120

Query: 144 ILKRSLDSPSRAVRSMPTSPMKKASR------PPPLARTGSCLSSLS 176
           IL++SLDSP R +RSMP SP K             L+R+ SC +SL+
Sbjct: 121 ILRKSLDSP-RMLRSMPNSPSKDDQDNHHDCVSNVLSRSDSCFASLT 166

[Close]

BLAST of Carg18976 vs. TAIR 10
Match: AT5G20670.1 (Protein of unknown function (DUF1677) )

HSP 1 Score: 97.1 bits (240), Expect = 1.6e-20
Identity = 62/156 (39.74%), Postives = 87/156 (55.77%), Query Frame = 0


Query: 25  SATVLSDTILEPQAASTKLIAHMEVEFVKCYCCGLIEECTPAYIQRVRERYNEHWICGLC 84
           S++  +DT  +P   S+ L A   VE V C  CG  EECTPAYI RV+ER+  HW+CGLC
Sbjct: 5   SSSSATDTNTKP---SSSLPA---VESVTCDTCGFAEECTPAYINRVKERHKGHWLCGLC 64

Query: 85  SEAINYEILRSRSLITAEEAMEIHMNLCKKFTALKPPPNPAVHLISAMRQILKRSLDSPS 144
           +EA+  E++RS + I+ EEA+  H   C +F +    P+     IS + +IL+RSLD   
Sbjct: 65  AEAVKDEVVRSSTRISVEEALRRHTTFCHRFRSWS--PDEEEDPISVIGRILRRSLDGSP 124

Query: 145 RAVRSMPTSP-----MKKASRPPPLARTGSCLSSLS 176
           R   +  +S      +        L R+GSC  SLS
Sbjct: 125 RRTNTRTSSSGALPGIDGVESRRSLLRSGSCFPSLS 152

[Close]

BLAST of Carg18976 vs. TAIR 10
Match: AT3G22540.1 (Protein of unknown function (DUF1677) )

HSP 1 Score: 96.3 bits (238), Expect = 2.7e-20
Identity = 43/92 (46.74%), Postives = 62/92 (67.39%), Query Frame = 0


Query: 47  MEVEFVKCYCCGLIEECTPAYIQRVRERYNEHWICGLCSEAINYEILRSRSLITAEEAME 106
           ME+E V+C CCGL+E+CT  YI  V+  ++  W+CGLCSEA+  E+ R R + T +EA++
Sbjct: 1   MEIESVRCECCGLMEDCTQDYISEVKSNFDNKWLCGLCSEAVRDEVSR-RKMTTVDEAVK 60

Query: 107 IHMNLCKKFTALKPPPNPAVHLISAMRQILKR 139
            H++ C KF       NPAVH+   MRQ+L+R
Sbjct: 61  AHVSFCGKF----KKDNPAVHVADGMRQMLRR 87

The following BLAST results are available for this feature:

BLAST of Carg18976 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7013981.1	1.9e-92	100.00	hypothetical protein SDJN02_24151, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6575437.1	1.4e-79	100.00	hypothetical protein SDJN03_26076, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7025898.1	5.8e-70	79.66	hypothetical protein SDJN02_12396, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_038896664.1	1.1e-65	85.81	uncharacterized protein LOC120084928 [Benincasa hispida] >XP_038896665.1 unchara...	[more]
XP_004141709.1	1.1e-65	85.81	uncharacterized protein LOC101205671 [Cucumis sativus] >KGN45478.1 hypothetical ...	[more]

BLAST of Carg18976 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg18976 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7Q6	5.5e-66	85.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448890 PE=4 SV=1	[more]
A0A6J1DKE6	1.6e-65	85.16	uncharacterized protein LOC111021346 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A6J1HLD2	3.6e-65	83.77	uncharacterized protein LOC111464570 OS=Cucurbita moschata OX=3662 GN=LOC1114645...	[more]
A0A5D3BWR1	2.3e-64	85.90	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CGK0	2.3e-64	85.90	uncharacterized protein LOC103500683 OS=Cucumis melo OX=3656 GN=LOC103500683 PE=...	[more]

BLAST of Carg18976 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G72510.1	4.1e-37	51.20	Protein of unknown function (DUF1677)	[more]
AT1G72510.2	4.1e-37	51.20	Protein of unknown function (DUF1677)	[more]
AT2G09970.1	5.3e-29	45.51	Protein of unknown function (DUF1677)	[more]
AT5G20670.1	1.6e-20	39.74	Protein of unknown function (DUF1677)	[more]
AT3G22540.1	2.7e-20	46.74	Protein of unknown function (DUF1677)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012876	Protein of unknown function DUF1677, plant	PFAM	PF07911	DUF1677	coord: 49..138 e-value: 9.8E-36 score: 122.0
IPR012876	Protein of unknown function DUF1677, plant	PANTHER	PTHR33108	OS01G0745000 PROTEIN	coord: 29..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..177
None	No IPR available	PANTHER	PTHR33108:SF32	DUF1677 FAMILY PROTEIN (DUF1677)	coord: 29..174

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18976-RA	Carg18976-RA	mRNA