Carg18950 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18950
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	FLZ-type domain-containing protein
Location	Carg_Chr17: 5811700 .. 5812544 (+)
RNA-Seq Expression	Carg18950
Synteny	Carg18950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCACAGGAATCCAACCAATTTGAAGGCTGTCGGGTTAGGAATCCTTGTTCATCGATCCCCAGAACCAAATCTAGTGGTTAAACAATCCAGAAAGCTTGTTTTTTCACTCACTTCATCTTCTAATAACCCATCTTTTCTCAAATCATGTGTTCTTTGCAACAAGAATCTTGACCCCCATGAAGATATTTACATGTACAGGTACTCAATTTTTGCTAAATTCATTAGCTGTTCATCATGGGTTATGAAATAGATCGGGAGTTCTTGTGTTTGGTGATCGAATCATGGAATTTGGTCATGAATTTTGCCGTTTTGTTGTTGGGTTTGTTTGATGATGTTTGGTCGTGTGAAACAGGGGAGATCAAGGTTACTGTAGTGTGAAGTGTCGGAACCAGCAGATTGAAATGGATGAAAAGAAGGAATTAGAAGCTTCTACAAGGAAAATGGTGGAAGCTTACAGGCAATGTCAGAGAAATGAAGGAAGTGAAACTCGCCGCCTCTTGGAGGATCTCCGGCGGCCACATCACCGGCTTCCATATCTCCGGCGACCTGTTGTTTCGTAGTCTCCTCTGTTTTGAATCTAATGGAAATGGCAAAATTGTAATTAAAATGGATGGAAGTAATAGAAGCCCTAAAGAGTGTTTTTTTGTTTAAGTTCTTGTCGATGGGTTTCTTTGTGTGTGTGTGTGTGGTAATGATGTAAGGCTGAAATGAAACATGTTAGGGATAAAAGTACTAACGTTATCTTCAAAATATCTGTCGGTGCATTATTGAGGAGTTGGGGTCTAGGTACGGGTTGGGAGATCTCACATGGTTGGAGAAAGGAACGAAACTTTTTTTTTT

mRNA sequence

ATGAACCACAGGAATCCAACCAATTTGAAGGCTGTCGGGTTAGGAATCCTTGTTCATCGATCCCCAGAACCAAATCTAGTGGTTAAACAATCCAGAAAGCTTGTTTTTTCACTCACTTCATCTTCTAATAACCCATCTTTTCTCAAATCATGTGTTCTTTGCAACAAGAATCTTGACCCCCATGAAGATATTTACATGTACAGGGGAGATCAAGGTTACTGTAGTGTGAAGTGTCGGAACCAGCAGATTGAAATGGATGAAAAGAAGGAATTAGAAGCTTCTACAAGGAAAATGGTGGAAGCTTACAGGCAATGTCAGAGAAATGAAGGAAGTGAAACTCGCCGCCTCTTGGAGGATCTCCGGCGGCCACATCACCGGCTTCCATATCTCCGGCGACCTGTTGTTTCGTAGTCTCCTCTGTTTTGAATCTAATGGAAATGGCAAAATTGTAATTAAAATGGATGGAAGTAATAGAAGCCCTAAAGAGTGTTTTTTTGTTTAAGTTCTTGTCGATGGGTTTCTTTGTGTGTGTGTGTGTGGTAATGATGTAAGGCTGAAATGAAACATGTTAGGGATAAAAGTACTAACGTTATCTTCAAAATATCTGTCGGTGCATTATTGAGGAGTTGGGGTCTAGGTACGGGTTGGGAGATCTCACATGGTTGGAGAAAGGAACGAAACTTTTTTTTTT

Coding sequence (CDS)

ATGAACCACAGGAATCCAACCAATTTGAAGGCTGTCGGGTTAGGAATCCTTGTTCATCGATCCCCAGAACCAAATCTAGTGGTTAAACAATCCAGAAAGCTTGTTTTTTCACTCACTTCATCTTCTAATAACCCATCTTTTCTCAAATCATGTGTTCTTTGCAACAAGAATCTTGACCCCCATGAAGATATTTACATGTACAGGGGAGATCAAGGTTACTGTAGTGTGAAGTGTCGGAACCAGCAGATTGAAATGGATGAAAAGAAGGAATTAGAAGCTTCTACAAGGAAAATGGTGGAAGCTTACAGGCAATGTCAGAGAAATGAAGGAAGTGAAACTCGCCGCCTCTTGGAGGATCTCCGGCGGCCACATCACCGGCTTCCATATCTCCGGCGACCTGTTGTTTCGTAG

Protein sequence

MNHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQRNEGSETRRLLEDLRRPHHRLPYLRRPVVS

Homology

[Close]

BLAST of Carg18950 vs. NCBI nr
Match: KAG7013956.1 (Protein MARD1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 276.2 bits (705), Expect = 1.5e-70
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 1   MNHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSCVLCNKNLDP 60
           MNHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSCVLCNKNLDP
Sbjct: 1   MNHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSCVLCNKNLDP 60

Query: 61  HEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQRNEGSETRRLLEDL 120
           HEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQRNEGSETRRLLEDL
Sbjct: 61  HEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQRNEGSETRRLLEDL 120

Query: 121 RRPHHRLPYLRRPVVS 137
           RRPHHRLPYLRRPVVS
Sbjct: 121 RRPHHRLPYLRRPVVS 136

[Close]

BLAST of Carg18950 vs. NCBI nr
Match: XP_022953803.1 (uncharacterized protein LOC111456219 [Cucurbita moschata])

HSP 1 Score: 275.0 bits (702), Expect = 3.4e-70
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 1   MNHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSCVLCNKNLDP 60
           MNHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSC+LCNKNLDP
Sbjct: 1   MNHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSCLLCNKNLDP 60

Query: 61  HEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQRNEGSETRRLLEDL 120
           HEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQRNEGSETRRLLEDL
Sbjct: 61  HEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQRNEGSETRRLLEDL 120

Query: 121 RRPHHRLPYLRRPVVS 137
           RRPHHRLPYLRRPVVS
Sbjct: 121 RRPHHRLPYLRRPVVS 136

[Close]

BLAST of Carg18950 vs. NCBI nr
Match: XP_023548878.1 (uncharacterized protein LOC111807399 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 272.7 bits (696), Expect = 1.7e-69
Identity = 134/136 (98.53%), Postives = 135/136 (99.26%), Query Frame = 0


Query: 1   MNHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSCVLCNKNLDP 60
           M HRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSCVLCNKNLDP
Sbjct: 1   MKHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSCVLCNKNLDP 60

Query: 61  HEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQRNEGSETRRLLEDL 120
           H+DIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQRNEGSETRRLLEDL
Sbjct: 61  HDDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQRNEGSETRRLLEDL 120

Query: 121 RRPHHRLPYLRRPVVS 137
           RRPHHRLPYLRRPVVS
Sbjct: 121 RRPHHRLPYLRRPVVS 136

[Close]

BLAST of Carg18950 vs. NCBI nr
Match: XP_022992436.1 (protein MARD1-like [Cucurbita maxima])

HSP 1 Score: 266.9 bits (681), Expect = 9.4e-68
Identity = 132/136 (97.06%), Postives = 133/136 (97.79%), Query Frame = 0


Query: 1   MNHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSCVLCNKNLDP 60
           M  RNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTS SNNPSFLKSCVLCNKNLDP
Sbjct: 1   MKQRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSCSNNPSFLKSCVLCNKNLDP 60

Query: 61  HEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQRNEGSETRRLLEDL 120
           HEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQRNEGSETRRLLEDL
Sbjct: 61  HEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQRNEGSETRRLLEDL 120

Query: 121 RRPHHRLPYLRRPVVS 137
           RRPHHRLP+LRRPVVS
Sbjct: 121 RRPHHRLPHLRRPVVS 136

[Close]

BLAST of Carg18950 vs. NCBI nr
Match: XP_008462244.1 (PREDICTED: uncharacterized protein LOC103500647 [Cucumis melo] >KAA0059360.1 DUF581 family protein [Cucumis melo var. makuwa] >TYK03966.1 DUF581 family protein [Cucumis melo var. makuwa])

HSP 1 Score: 194.9 bits (494), Expect = 4.5e-46
Identity = 106/138 (76.81%), Postives = 119/138 (86.23%), Query Frame = 0


Query: 2   NHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSS-NNPSFLKSCVLCNKNLDP 61
           N  + + LK VGLGILVHRSPEPNLVVKQSRKL  SL SSS NNPSFLK+C LCNKNLDP
Sbjct: 15  NDNSSSYLKGVGLGILVHRSPEPNLVVKQSRKLSPSLVSSSNNNPSFLKTCSLCNKNLDP 74

Query: 62  HEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQRNE-GSETRRLLED 121
            EDIYMYRGDQGYCS+KCRNQQI++D+K+ELEASTRKMV AYRQC +NE  +ETR LLED
Sbjct: 75  QEDIYMYRGDQGYCSIKCRNQQIDIDDKRELEASTRKMVAAYRQCLKNEPRTETRLLLED 134

Query: 122 LRRPHHRLPYLR-RPVVS 137
           LR+ H+RLP+ R RPVVS
Sbjct: 135 LRQ-HNRLPHSRIRPVVS 151

[Close]

BLAST of Carg18950 vs. ExPASy Swiss-Prot
Match: P0DO11 (FCS-Like Zinc finger 17 OS=Arabidopsis thaliana OX=3702 GN=FLZ17 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.2e-19
Identity = 55/120 (45.83%), Postives = 79/120 (65.83%), Query Frame = 0


Query: 11  AVGLGILVHRSPEP--NLVVKQSRKLVFSLTSSSNNPS-----FLKSCVLCNKNLDPHED 70
           +VGL ++   S E   N+V+K S +L      + +NP+     FLK+C LCNK L   +D
Sbjct: 5   SVGLQLVTRDSREKLNNIVIKSSLRL------NRSNPNISELCFLKTCHLCNKQLHQDKD 64

Query: 71  IYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQRNEG-SETRRLLEDLRR 123
           +YMYRGD G+CS +CR  Q+ +D++KELEAST+ M+ +YR+C    G SE+R L +DLRR
Sbjct: 65  VYMYRGDLGFCSRECRESQMLIDDRKELEASTKMMLASYRRCNNGAGKSESRNLFDDLRR 118

[Close]

BLAST of Carg18950 vs. ExPASy Swiss-Prot
Match: P0DO12 (FCS-Like Zinc finger 18 OS=Arabidopsis thaliana OX=3702 GN=FLZ18 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.2e-19
Identity = 55/120 (45.83%), Postives = 79/120 (65.83%), Query Frame = 0


Query: 11  AVGLGILVHRSPEP--NLVVKQSRKLVFSLTSSSNNPS-----FLKSCVLCNKNLDPHED 70
           +VGL ++   S E   N+V+K S +L      + +NP+     FLK+C LCNK L   +D
Sbjct: 5   SVGLQLVTRDSREKLNNIVIKSSLRL------NRSNPNISELCFLKTCHLCNKQLHQDKD 64

Query: 71  IYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQRNEG-SETRRLLEDLRR 123
           +YMYRGD G+CS +CR  Q+ +D++KELEAST+ M+ +YR+C    G SE+R L +DLRR
Sbjct: 65  VYMYRGDLGFCSRECRESQMLIDDRKELEASTKMMLASYRRCNNGAGKSESRNLFDDLRR 118

[Close]

BLAST of Carg18950 vs. ExPASy Swiss-Prot
Match: Q9LV75 (Protein INCREASED RESISTANCE TO MYZUS PERSICAE 1 OS=Arabidopsis thaliana OX=3702 GN=IRM1 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.1e-10
Identity = 28/49 (57.14%), Postives = 39/49 (79.59%), Query Frame = 0


Query: 41 SSNNPSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKK 90
          +SN   FLK+C LCN++L  H DIYMYRG+  +CS++CR +QI++DEKK
Sbjct: 51 ASNYDDFLKTCSLCNRSLCHHRDIYMYRGNNAFCSLECREKQIKLDEKK 99

[Close]

BLAST of Carg18950 vs. ExPASy Swiss-Prot
Match: Q8VZM9 (FCS-Like Zinc finger 2 OS=Arabidopsis thaliana OX=3702 GN=FLZ2 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.9e-10
Identity = 32/69 (46.38%), Postives = 43/69 (62.32%), Query Frame = 0


Query: 45  PSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQ 104
           P FL SC LC K L  + DI+MYRGD  +CS +CR +QIE DE KE + S    V+A R+
Sbjct: 74  PHFLDSCFLCKKRLGDNRDIFMYRGDTPFCSEECREEQIERDEAKEKKQSLSTSVKAMRR 133

Query: 105 CQRNEGSET 114
            ++   S +
Sbjct: 134 NEKRSSSSS 142

[Close]

BLAST of Carg18950 vs. ExPASy Swiss-Prot
Match: Q9FH22 (FCS-Like Zinc finger 15 OS=Arabidopsis thaliana OX=3702 GN=FLZ15 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 9.3e-10
Identity = 34/97 (35.05%), Postives = 57/97 (58.76%), Query Frame = 0


Query: 2   NHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNN-------PSFLKSCVLC 61
           N+ N  N   +  G+L+     P +V K +  +  ++T+ + N         FL+ C LC
Sbjct: 20  NNNNNNNKNPLSEGVLI----SPKVVNKANIIVTTAVTTDTTNLRRCYQDSGFLEHCFLC 79

Query: 62  NKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKEL 92
            + L P +DIYMY+GD+ +CSV+CR++Q+ MDE++ L
Sbjct: 80  RRKLLPAKDIYMYKGDRAFCSVECRSKQMIMDEEESL 112

[Close]

BLAST of Carg18950 vs. ExPASy TrEMBL
Match: A0A6J1GPB9 (uncharacterized protein LOC111456219 OS=Cucurbita moschata OX=3662 GN=LOC111456219 PE=3 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.7e-70
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 1   MNHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSCVLCNKNLDP 60
           MNHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSC+LCNKNLDP
Sbjct: 1   MNHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSCLLCNKNLDP 60

Query: 61  HEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQRNEGSETRRLLEDL 120
           HEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQRNEGSETRRLLEDL
Sbjct: 61  HEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQRNEGSETRRLLEDL 120

Query: 121 RRPHHRLPYLRRPVVS 137
           RRPHHRLPYLRRPVVS
Sbjct: 121 RRPHHRLPYLRRPVVS 136

[Close]

BLAST of Carg18950 vs. ExPASy TrEMBL
Match: A0A6J1JTJ9 (protein MARD1-like OS=Cucurbita maxima OX=3661 GN=LOC111488741 PE=3 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 4.5e-68
Identity = 132/136 (97.06%), Postives = 133/136 (97.79%), Query Frame = 0


Query: 1   MNHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSCVLCNKNLDP 60
           M  RNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTS SNNPSFLKSCVLCNKNLDP
Sbjct: 1   MKQRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSCSNNPSFLKSCVLCNKNLDP 60

Query: 61  HEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQRNEGSETRRLLEDL 120
           HEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQRNEGSETRRLLEDL
Sbjct: 61  HEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQRNEGSETRRLLEDL 120

Query: 121 RRPHHRLPYLRRPVVS 137
           RRPHHRLP+LRRPVVS
Sbjct: 121 RRPHHRLPHLRRPVVS 136

[Close]

BLAST of Carg18950 vs. ExPASy TrEMBL
Match: A0A5D3C0J4 (DUF581 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001630 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 2.2e-46
Identity = 106/138 (76.81%), Postives = 119/138 (86.23%), Query Frame = 0


Query: 2   NHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSS-NNPSFLKSCVLCNKNLDP 61
           N  + + LK VGLGILVHRSPEPNLVVKQSRKL  SL SSS NNPSFLK+C LCNKNLDP
Sbjct: 15  NDNSSSYLKGVGLGILVHRSPEPNLVVKQSRKLSPSLVSSSNNNPSFLKTCSLCNKNLDP 74

Query: 62  HEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQRNE-GSETRRLLED 121
            EDIYMYRGDQGYCS+KCRNQQI++D+K+ELEASTRKMV AYRQC +NE  +ETR LLED
Sbjct: 75  QEDIYMYRGDQGYCSIKCRNQQIDIDDKRELEASTRKMVAAYRQCLKNEPRTETRLLLED 134

Query: 122 LRRPHHRLPYLR-RPVVS 137
           LR+ H+RLP+ R RPVVS
Sbjct: 135 LRQ-HNRLPHSRIRPVVS 151

[Close]

BLAST of Carg18950 vs. ExPASy TrEMBL
Match: A0A1S3CGJ4 (uncharacterized protein LOC103500647 OS=Cucumis melo OX=3656 GN=LOC103500647 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 2.2e-46
Identity = 106/138 (76.81%), Postives = 119/138 (86.23%), Query Frame = 0


Query: 2   NHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSS-NNPSFLKSCVLCNKNLDP 61
           N  + + LK VGLGILVHRSPEPNLVVKQSRKL  SL SSS NNPSFLK+C LCNKNLDP
Sbjct: 15  NDNSSSYLKGVGLGILVHRSPEPNLVVKQSRKLSPSLVSSSNNNPSFLKTCSLCNKNLDP 74

Query: 62  HEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQRNE-GSETRRLLED 121
            EDIYMYRGDQGYCS+KCRNQQI++D+K+ELEASTRKMV AYRQC +NE  +ETR LLED
Sbjct: 75  QEDIYMYRGDQGYCSIKCRNQQIDIDDKRELEASTRKMVAAYRQCLKNEPRTETRLLLED 134

Query: 122 LRRPHHRLPYLR-RPVVS 137
           LR+ H+RLP+ R RPVVS
Sbjct: 135 LRQ-HNRLPHSRIRPVVS 151

[Close]

BLAST of Carg18950 vs. ExPASy TrEMBL
Match: A0A0A0K9B4 (FLZ-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G448060 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.9e-45
Identity = 103/131 (78.63%), Postives = 116/131 (88.55%), Query Frame = 0


Query: 9   LKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSS-NNPSFLKSCVLCNKNLDPHEDIYMY 68
           LK +GLGILVHRSPEPNLVVKQSRKL  SL SSS NNPSFLK+C LCNKNLDP EDIYMY
Sbjct: 23  LKGIGLGILVHRSPEPNLVVKQSRKLSPSLVSSSNNNPSFLKTCSLCNKNLDPQEDIYMY 82

Query: 69  RGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQRNE-GSETRRLLEDLRRPHHR 128
           RGDQGYCS+KCRNQQI++D+K+ELEASTRKMV AYR+C +NE  +ETR LLEDLR+ H+R
Sbjct: 83  RGDQGYCSIKCRNQQIDIDDKRELEASTRKMVAAYRKCLKNEPRTETRLLLEDLRQ-HNR 142

Query: 129 LPYLR-RPVVS 137
           LP+ R RPVVS
Sbjct: 143 LPHSRIRPVVS 152

[Close]

BLAST of Carg18950 vs. TAIR 10
Match: AT1G53885.1 (Protein of unknown function (DUF581) )

HSP 1 Score: 96.7 bits (239), Expect = 1.6e-20
Identity = 55/120 (45.83%), Postives = 79/120 (65.83%), Query Frame = 0


Query: 11  AVGLGILVHRSPEP--NLVVKQSRKLVFSLTSSSNNPS-----FLKSCVLCNKNLDPHED 70
           +VGL ++   S E   N+V+K S +L      + +NP+     FLK+C LCNK L   +D
Sbjct: 5   SVGLQLVTRDSREKLNNIVIKSSLRL------NRSNPNISELCFLKTCHLCNKQLHQDKD 64

Query: 71  IYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQRNEG-SETRRLLEDLRR 123
           +YMYRGD G+CS +CR  Q+ +D++KELEAST+ M+ +YR+C    G SE+R L +DLRR
Sbjct: 65  VYMYRGDLGFCSRECRESQMLIDDRKELEASTKMMLASYRRCNNGAGKSESRNLFDDLRR 118

[Close]

BLAST of Carg18950 vs. TAIR 10
Match: AT1G53903.1 (Protein of unknown function (DUF581) )

HSP 1 Score: 96.7 bits (239), Expect = 1.6e-20
Identity = 55/120 (45.83%), Postives = 79/120 (65.83%), Query Frame = 0


Query: 11  AVGLGILVHRSPEP--NLVVKQSRKLVFSLTSSSNNPS-----FLKSCVLCNKNLDPHED 70
           +VGL ++   S E   N+V+K S +L      + +NP+     FLK+C LCNK L   +D
Sbjct: 5   SVGLQLVTRDSREKLNNIVIKSSLRL------NRSNPNISELCFLKTCHLCNKQLHQDKD 64

Query: 71  IYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQRNEG-SETRRLLEDLRR 123
           +YMYRGD G+CS +CR  Q+ +D++KELEAST+ M+ +YR+C    G SE+R L +DLRR
Sbjct: 65  VYMYRGDLGFCSRECRESQMLIDDRKELEASTKMMLASYRRCNNGAGKSESRNLFDDLRR 118

[Close]

BLAST of Carg18950 vs. TAIR 10
Match: AT5G65040.1 (Protein of unknown function (DUF581) )

HSP 1 Score: 67.8 bits (164), Expect = 7.8e-12
Identity = 28/49 (57.14%), Postives = 39/49 (79.59%), Query Frame = 0


Query: 41 SSNNPSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKK 90
          +SN   FLK+C LCN++L  H DIYMYRG+  +CS++CR +QI++DEKK
Sbjct: 51 ASNYDDFLKTCSLCNRSLCHHRDIYMYRGNNAFCSLECREKQIKLDEKK 99

[Close]

BLAST of Carg18950 vs. TAIR 10
Match: AT4G17670.1 (Protein of unknown function (DUF581) )

HSP 1 Score: 67.0 bits (162), Expect = 1.3e-11
Identity = 32/69 (46.38%), Postives = 43/69 (62.32%), Query Frame = 0


Query: 45  PSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQ 104
           P FL SC LC K L  + DI+MYRGD  +CS +CR +QIE DE KE + S    V+A R+
Sbjct: 74  PHFLDSCFLCKKRLGDNRDIFMYRGDTPFCSEECREEQIERDEAKEKKQSLSTSVKAMRR 133

Query: 105 CQRNEGSET 114
            ++   S +
Sbjct: 134 NEKRSSSSS 142

[Close]

BLAST of Carg18950 vs. TAIR 10
Match: AT5G49120.1 (Protein of unknown function (DUF581) )

HSP 1 Score: 64.7 bits (156), Expect = 6.6e-11
Identity = 34/97 (35.05%), Postives = 57/97 (58.76%), Query Frame = 0


Query: 2   NHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNN-------PSFLKSCVLC 61
           N+ N  N   +  G+L+     P +V K +  +  ++T+ + N         FL+ C LC
Sbjct: 20  NNNNNNNKNPLSEGVLI----SPKVVNKANIIVTTAVTTDTTNLRRCYQDSGFLEHCFLC 79

Query: 62  NKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKEL 92
            + L P +DIYMY+GD+ +CSV+CR++Q+ MDE++ L
Sbjct: 80  RRKLLPAKDIYMYKGDRAFCSVECRSKQMIMDEEESL 112

The following BLAST results are available for this feature:

BLAST of Carg18950 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7013956.1	1.5e-70	100.00	Protein MARD1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022953803.1	3.4e-70	99.26	uncharacterized protein LOC111456219 [Cucurbita moschata]	[more]
XP_023548878.1	1.7e-69	98.53	uncharacterized protein LOC111807399 [Cucurbita pepo subsp. pepo]	[more]
XP_022992436.1	9.4e-68	97.06	protein MARD1-like [Cucurbita maxima]	[more]
XP_008462244.1	4.5e-46	76.81	PREDICTED: uncharacterized protein LOC103500647 [Cucumis melo] >KAA0059360.1 DUF...	[more]

BLAST of Carg18950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0DO11	2.2e-19	45.83	FCS-Like Zinc finger 17 OS=Arabidopsis thaliana OX=3702 GN=FLZ17 PE=1 SV=1	[more]
P0DO12	2.2e-19	45.83	FCS-Like Zinc finger 18 OS=Arabidopsis thaliana OX=3702 GN=FLZ18 PE=1 SV=1	[more]
Q9LV75	1.1e-10	57.14	Protein INCREASED RESISTANCE TO MYZUS PERSICAE 1 OS=Arabidopsis thaliana OX=3702...	[more]
Q8VZM9	1.9e-10	46.38	FCS-Like Zinc finger 2 OS=Arabidopsis thaliana OX=3702 GN=FLZ2 PE=1 SV=1	[more]
Q9FH22	9.3e-10	35.05	FCS-Like Zinc finger 15 OS=Arabidopsis thaliana OX=3702 GN=FLZ15 PE=1 SV=1	[more]

BLAST of Carg18950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GPB9	1.7e-70	99.26	uncharacterized protein LOC111456219 OS=Cucurbita moschata OX=3662 GN=LOC1114562...	[more]
A0A6J1JTJ9	4.5e-68	97.06	protein MARD1-like OS=Cucurbita maxima OX=3661 GN=LOC111488741 PE=3 SV=1	[more]
A0A5D3C0J4	2.2e-46	76.81	DUF581 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold34...	[more]
A0A1S3CGJ4	2.2e-46	76.81	uncharacterized protein LOC103500647 OS=Cucumis melo OX=3656 GN=LOC103500647 PE=...	[more]
A0A0A0K9B4	1.9e-45	78.63	FLZ-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G448060 PE...	[more]

BLAST of Carg18950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53885.1	1.6e-20	45.83	Protein of unknown function (DUF581)	[more]
AT1G53903.1	1.6e-20	45.83	Protein of unknown function (DUF581)	[more]
AT5G65040.1	7.8e-12	57.14	Protein of unknown function (DUF581)	[more]
AT4G17670.1	1.3e-11	46.38	Protein of unknown function (DUF581)	[more]
AT5G49120.1	6.6e-11	35.05	Protein of unknown function (DUF581)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007650	Zf-FLZ domain	PFAM	PF04570	zf-FLZ	coord: 42..89 e-value: 6.4E-22 score: 76.8
IPR007650	Zf-FLZ domain	PROSITE	PS51795	ZF_FLZ	coord: 46..90 score: 22.4338
IPR044181	FCS-Like Zinc finger 17/18	PANTHER	PTHR47847	FCS-LIKE ZINC FINGER 17	coord: 6..128
None	No IPR available	PANTHER	PTHR47847:SF2	FCS-LIKE ZINC FINGER 17	coord: 6..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18950-RA	Carg18950-RA	mRNA