Carg18883 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18883
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	outer envelope pore protein 16-2, chloroplastic
Location	Carg_Chr08: 7697340 .. 7699326 (+)
RNA-Seq Expression	Carg18883
Synteny	Carg18883

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGAAGAGTTGTTAATAAGGGAGTGAAATCCACGTAAAGAACTTCATTCCTGGAGTTGCTACGCAGCCGATCTTTTCGCATGACACGTCACTGCCTATTATACCACCTGTCGATCCGTTCTTGTTTCTCTATTTCTTCAGCGTCCTCCTTGTATATTCTTCAGTTTAGGCACATTCGAGCGTTTCTTCGTCTCACTGGTTTTAGCAATCAAATCGACTGCAGCAGGTTTTGGAGTTCAGTTATAGTCAATCTCTGTTTCTTGTAGGCCTAAGAAGAAGATTTCGAAGAAGAAATGGGCAGTAGAAGCCTTGAGAATCGTTCTATGGTTGATGAAATCAAATGCTCCCAGGGCGGAACTTTCTTGTACGACTTTGGTCATCCTCTTCTCAATCGCGTTGCTGATAGCTTCATCAAGGCCGCTGGGGTGCGTAAGCTTTTGTGATTTTACTTTCGGATTATTTCTGTGATGATCTTGATGTGATAGTGCTGTTTGGGACCTCAATGTGTTAATCTAAGGTGTCGATGGTTTGCTGTACAGATTGGAGCATTGCAATCTGTGTCTCGAGAGGCGTATTTTACGGTTGCAGGGAGTAAGATTCGTCTCATTTAGTATTTCGAACTGATCCTTGCTTTATTTGACTCACATTCGATCACACTTGTTTTTTTATTTTGTTTCACTTTTTTGTTGTGTACTTTTTGTTTATGTTGCGCGTTTAGGCAACGATTGATGTTAAATTGGTTAACAAAAATTTGTAATGCTTGGAAGAAATTTACCATGGGTACAGGTCTTGATTCGGACAACGGACCGCGGCCTGAATTACCGGGAGCTAAAAAGCGACATGTTCCAGGTCTCAAAGGTACTCGACCGTTCTTCCGAATCAAACTCTGTTTATCCACGAGCAAAGTCGTTCTCAAGTCTTCCTTGCTAGGTTTGATTTTGTTTTTCTTGCCTGGTGAAAATGTCAACTGTCTGTAAGTTGAGTACTAGTAGTGTCAGATTGATTCCACCTGTTAGATGTGCATTATTTTGGGCTACATTTGAGACATGGTTCTGTATAACTTGTTATGAAGTCCTTTGAGATGCTTGAAGCTCACTTTCTTCATATGCCGTGCAGGTGAAACCAACAAAGAGTCTCTTGAAGCCATGGTGAGTGCTTGTGACGGGTGATTTTGTGTTGAATTTGTGATGAATTATTTGCAGCGAGTAGTGGTCTGTAAACATGTAAGAATTTTTCATTTATGGTGCATGTCAGGTGAAGAGCGTGGGACAAGAATCTATCCAATGGGGTCAGTTTCTCTTCTCTGAACTGTTCAAATATACTAATCTGGCTTAAATACCTTTCTTGCATATCTGATTTATGTGTTCTTCAAGTCACCAATTGGATGTCACCGAATTGAGTATTTGGTCCCTTTCAAATCTTTCCCAGCGTAACTTCACTACTAGATTCTCTTCTACAGTCTTATAATACTTCACCTTGGAAGATTATTTCTCTGCTTCATCTTGATTCCCTCTACAGAGAGGGTGATGAACTGAAAGCTTTTGGTTTGGCGGTGTGATTCAATTGCATATTTAGTGTTGTTTAATTTTACTTCATTGCTCTCTGCCAACTTTGTTGTTGTTTTGGGCTGTAGGATTAGCTGCTGGTGTTTATTCTGGTCTTACATACGGTTTAAAGGAGGCTCGTGGAGCACATGACTGGGTAACCCTTCTACAAAAATAACCAATAATGGTTTGATCAAAATATGGCATCTGATTCAGGGCTTTTAGCTAGAATTGAGTTCAGAGAACACTAAAACCTCGATATTTGATTTGCAGAAGAACAGTGCAATCGCTGGTGCAGTAACGGGTGTAGCAGTGGCACTTGCATCAGACGACTCTTCTCATGAGCGTATAATACAAAGCGCCATCACCGGCGCTGCTGTGTCGGCGGCTGCTAATATTTTTGCTGGCATATTTTAGGCTCTCCCAGTACTTCTACTACTAGG

mRNA sequence

AAAGAAGAGTTGTTAATAAGGGAGTGAAATCCACGTAAAGAACTTCATTCCTGGAGTTGCTACGCAGCCGATCTTTTCGCATGACACGTCACTGCCTATTATACCACCTGTCGATCCGTTCTTGTTTCTCTATTTCTTCAGCGTCCTCCTTGTATATTCTTCAGTTTAGGCACATTCGAGCGTTTCTTCGTCTCACTGGTTTTAGCAATCAAATCGACTGCAGCAGGTTTTGGAGTTCAGTTATAGTCAATCTCTGTTTCTTGTAGGCCTAAGAAGAAGATTTCGAAGAAGAAATGGGCAGTAGAAGCCTTGAGAATCGTTCTATGGTTGATGAAATCAAATGCTCCCAGGGCGGAACTTTCTTGTACGACTTTGGTCATCCTCTTCTCAATCGCGTTGCTGATAGCTTCATCAAGGCCGCTGGGATTGGAGCATTGCAATCTGTGTCTCGAGAGGCGTATTTTACGGTTGCAGGGAGTCTTGATTCGGACAACGGACCGCGGCCTGAATTACCGGGAGCTAAAAAGCGACATGTTCCAGGTCTCAAAGGTGAAACCAACAAAGAGTCTCTTGAAGCCATGGTGAAGAGCGTGGGACAAGAATCTATCCAATGGGGATTAGCTGCTGGTGTTTATTCTGGTCTTACATACGGTTTAAAGGAGGCTCGTGGAGCACATGACTGGAAGAACAGTGCAATCGCTGGTGCAGTAACGGGTGTAGCAGTGGCACTTGCATCAGACGACTCTTCTCATGAGCGTATAATACAAAGCGCCATCACCGGCGCTGCTGTGTCGGCGGCTGCTAATATTTTTGCTGGCATATTTTAGGCTCTCCCAGTACTTCTACTACTAGG

Coding sequence (CDS)

ATGGGCAGTAGAAGCCTTGAGAATCGTTCTATGGTTGATGAAATCAAATGCTCCCAGGGCGGAACTTTCTTGTACGACTTTGGTCATCCTCTTCTCAATCGCGTTGCTGATAGCTTCATCAAGGCCGCTGGGATTGGAGCATTGCAATCTGTGTCTCGAGAGGCGTATTTTACGGTTGCAGGGAGTCTTGATTCGGACAACGGACCGCGGCCTGAATTACCGGGAGCTAAAAAGCGACATGTTCCAGGTCTCAAAGGTGAAACCAACAAAGAGTCTCTTGAAGCCATGGTGAAGAGCGTGGGACAAGAATCTATCCAATGGGGATTAGCTGCTGGTGTTTATTCTGGTCTTACATACGGTTTAAAGGAGGCTCGTGGAGCACATGACTGGAAGAACAGTGCAATCGCTGGTGCAGTAACGGGTGTAGCAGTGGCACTTGCATCAGACGACTCTTCTCATGAGCGTATAATACAAAGCGCCATCACCGGCGCTGCTGTGTCGGCGGCTGCTAATATTTTTGCTGGCATATTTTAG

Protein sequence

MGSRSLENRSMVDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVAGSLDSDNGPRPELPGAKKRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALASDDSSHERIIQSAITGAAVSAAANIFAGIF

Homology

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BLAST of Carg18883 vs. NCBI nr
Match: KAG7026350.1 (Outer envelope pore protein 16-2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 344.4 bits (882), Expect = 6.0e-91
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MGSRSLENRSMVDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVA 60
           MGSRSLENRSMVDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVA
Sbjct: 1   MGSRSLENRSMVDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVA 60

Query: 61  GSLDSDNGPRPELPGAKKRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYG 120
           GSLDSDNGPRPELPGAKKRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYG
Sbjct: 61  GSLDSDNGPRPELPGAKKRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYG 120

Query: 121 LKEARGAHDWKNSAIAGAVTGVAVALASDDSSHERIIQSAITGAAVSAAANIFAGIF 178
           LKEARGAHDWKNSAIAGAVTGVAVALASDDSSHERIIQSAITGAAVSAAANIFAGIF
Sbjct: 121 LKEARGAHDWKNSAIAGAVTGVAVALASDDSSHERIIQSAITGAAVSAAANIFAGIF 177

[Close]

BLAST of Carg18883 vs. NCBI nr
Match: XP_022930432.1 (outer envelope pore protein 16-2, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 342.8 bits (878), Expect = 1.7e-90
Identity = 175/177 (98.87%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MGSRSLENRSMVDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVA 60
           MGSRSLENRSMVDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVA
Sbjct: 1   MGSRSLENRSMVDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVA 60

Query: 61  GSLDSDNGPRPELPGAKKRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYG 120
           GSLDSDNGPRPELPGA+KRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYG
Sbjct: 61  GSLDSDNGPRPELPGARKRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYG 120

Query: 121 LKEARGAHDWKNSAIAGAVTGVAVALASDDSSHERIIQSAITGAAVSAAANIFAGIF 178
           LKEARGAHDWKNSAIAGAVTGVAVALASDDSSHERI+QSAITGAAVSAAANIFAGIF
Sbjct: 121 LKEARGAHDWKNSAIAGAVTGVAVALASDDSSHERIVQSAITGAAVSAAANIFAGIF 177

[Close]

BLAST of Carg18883 vs. NCBI nr
Match: KAG6594008.1 (Outer envelope pore protein 16-2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 341.7 bits (875), Expect = 3.9e-90
Identity = 174/177 (98.31%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MGSRSLENRSMVDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVA 60
           MGSRSLENRSMVDEIKCS+GGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVA
Sbjct: 1   MGSRSLENRSMVDEIKCSEGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVA 60

Query: 61  GSLDSDNGPRPELPGAKKRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYG 120
           GSLDSDNGPRPELPGA+KRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYG
Sbjct: 61  GSLDSDNGPRPELPGARKRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYG 120

Query: 121 LKEARGAHDWKNSAIAGAVTGVAVALASDDSSHERIIQSAITGAAVSAAANIFAGIF 178
           LKEARGAHDWKNSAIAGAVTGVAVALASDDSSHERI+QSAITGAAVSAAANIFAGIF
Sbjct: 121 LKEARGAHDWKNSAIAGAVTGVAVALASDDSSHERIVQSAITGAAVSAAANIFAGIF 177

[Close]

BLAST of Carg18883 vs. NCBI nr
Match: XP_022930433.1 (outer envelope pore protein 16-2, chloroplastic-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 336.3 bits (861), Expect = 1.6e-88
Identity = 174/177 (98.31%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 1   MGSRSLENRSMVDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVA 60
           MGSRSLENRSMVDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVA
Sbjct: 1   MGSRSLENRSMVDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVA 60

Query: 61  GSLDSDNGPRPELPGAKKRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYG 120
           GSLDSDNGPRPELPGA+KRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYG
Sbjct: 61  GSLDSDNGPRPELPGARKRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYG 120

Query: 121 LKEARGAHDWKNSAIAGAVTGVAVALASDDSSHERIIQSAITGAAVSAAANIFAGIF 178
           LKEARGAHDW NSAIAGAVTGVAVALASDDSSHERI+QSAITGAAVSAAANIFAGIF
Sbjct: 121 LKEARGAHDW-NSAIAGAVTGVAVALASDDSSHERIVQSAITGAAVSAAANIFAGIF 176

[Close]

BLAST of Carg18883 vs. NCBI nr
Match: XP_023514075.1 (outer envelope pore protein 16-2, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 333.2 bits (853), Expect = 1.4e-87
Identity = 171/177 (96.61%), Postives = 174/177 (98.31%), Query Frame = 0


Query: 1   MGSRSLENRSMVDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVA 60
           MGSRSLENRS+VDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVA
Sbjct: 1   MGSRSLENRSVVDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVA 60

Query: 61  GSLDSDNGPRPELPGAKKRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYG 120
           GSLDSDNGP PEL  A+KRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYG
Sbjct: 61  GSLDSDNGPPPELSSARKRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYG 120

Query: 121 LKEARGAHDWKNSAIAGAVTGVAVALASDDSSHERIIQSAITGAAVSAAANIFAGIF 178
           LKEARGAHDWKNSAIAGAVTGVAVALASDDSSHERI+QSAITGAAVSAAANIFAGIF
Sbjct: 121 LKEARGAHDWKNSAIAGAVTGVAVALASDDSSHERIVQSAITGAAVSAAANIFAGIF 177

[Close]

BLAST of Carg18883 vs. ExPASy Swiss-Prot
Match: Q0WMZ5 (Outer envelope pore protein 16-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP162 PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 3.5e-49
Identity = 103/174 (59.20%), Postives = 139/174 (79.89%), Query Frame = 0


Query: 9   RSMVDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTV--AGSLDSD 68
           R ++DEI+ S     L+D GHPLLNR+ADSF+KAAG+GALQ+VSREAYFTV      DS+
Sbjct: 7   RIVMDEIR-SFEKAHLFDLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGAGFDSN 66

Query: 69  N-GPRPELPGAKKRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYGLKEAR 128
           N GP  E+ G KK   P L+GE++K SL+A+VK+ G+ES+QWGLAAG+YSG+TYG+ E R
Sbjct: 67  NVGPPSEITGNKKHRFPNLRGESSK-SLDALVKNTGKESLQWGLAAGLYSGITYGMTEVR 126

Query: 129 -GAHDWKNSAIAGAVTGVAVAL-ASDDSSHERIIQSAITGAAVSAAANIFAGIF 178
            GAHDW+NSA+AGA+TG A+A+  S+ +SHE+++QSA+TGAA+S AAN+ + +F
Sbjct: 127 GGAHDWRNSAVAGALTGAAMAMTTSERTSHEQVVQSALTGAAISTAANLLSSVF 178

[Close]

BLAST of Carg18883 vs. ExPASy Swiss-Prot
Match: Q41050 (Outer envelope pore protein 16, chloroplastic OS=Pisum sativum OX=3888 GN=OEP16 PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.1e-15
Identity = 48/145 (33.10%), Postives = 71/145 (48.97%), Query Frame = 0


Query: 26  DFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVAGSLDSDNGPRPELPGAKKRHVPGLK 85
           D G+P LN   D F+K   + A +SV+ + +  +                         K
Sbjct: 20  DMGNPFLNLTVDGFLKIGAVAATRSVAEDTFHIIR------------------------K 79

Query: 86  GETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVA 145
           G  +    E  +K + +E   WG  AGVY G+ YG++  RG  DWKN+   GAVTG  V+
Sbjct: 80  GSISSNDFEKSLKKMCKEGAYWGAIAGVYVGMEYGVERIRGTRDWKNAMFGGAVTGALVS 139

Query: 146 LASDDSSHERIIQSAITGAAVSAAA 171
            AS++   ++I   AITGAA++ AA
Sbjct: 140 AASNNKK-DKIAVDAITGAAIATAA 139

[Close]

BLAST of Carg18883 vs. ExPASy Swiss-Prot
Match: Q9LZH8 (Outer envelope pore protein 16-4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP164 PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 4.4e-04
Identity = 27/76 (35.53%), Postives = 45/76 (59.21%), Query Frame = 0


Query: 96  MVKSVGQESIQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALASDDSSHER 155
           + KS+G+   Q GL +GV++    GL+  RG +DW N+ + GAV G AVA+++   +  +
Sbjct: 52  VAKSIGRFGFQCGLVSGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAIST--RNWTQ 111

Query: 156 IIQSAITGAAVSAAAN 172
           ++  A   +A S  AN
Sbjct: 112 VVGMAGLVSAFSVLAN 125

[Close]

BLAST of Carg18883 vs. ExPASy TrEMBL
Match: A0A6J1EQH2 (outer envelope pore protein 16-2, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436880 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 8.5e-91
Identity = 175/177 (98.87%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MGSRSLENRSMVDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVA 60
           MGSRSLENRSMVDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVA
Sbjct: 1   MGSRSLENRSMVDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVA 60

Query: 61  GSLDSDNGPRPELPGAKKRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYG 120
           GSLDSDNGPRPELPGA+KRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYG
Sbjct: 61  GSLDSDNGPRPELPGARKRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYG 120

Query: 121 LKEARGAHDWKNSAIAGAVTGVAVALASDDSSHERIIQSAITGAAVSAAANIFAGIF 178
           LKEARGAHDWKNSAIAGAVTGVAVALASDDSSHERI+QSAITGAAVSAAANIFAGIF
Sbjct: 121 LKEARGAHDWKNSAIAGAVTGVAVALASDDSSHERIVQSAITGAAVSAAANIFAGIF 177

[Close]

BLAST of Carg18883 vs. ExPASy TrEMBL
Match: A0A6J1EV59 (outer envelope pore protein 16-2, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111436880 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 7.9e-89
Identity = 174/177 (98.31%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 1   MGSRSLENRSMVDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVA 60
           MGSRSLENRSMVDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVA
Sbjct: 1   MGSRSLENRSMVDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVA 60

Query: 61  GSLDSDNGPRPELPGAKKRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYG 120
           GSLDSDNGPRPELPGA+KRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYG
Sbjct: 61  GSLDSDNGPRPELPGARKRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYG 120

Query: 121 LKEARGAHDWKNSAIAGAVTGVAVALASDDSSHERIIQSAITGAAVSAAANIFAGIF 178
           LKEARGAHDW NSAIAGAVTGVAVALASDDSSHERI+QSAITGAAVSAAANIFAGIF
Sbjct: 121 LKEARGAHDW-NSAIAGAVTGVAVALASDDSSHERIVQSAITGAAVSAAANIFAGIF 176

[Close]

BLAST of Carg18883 vs. ExPASy TrEMBL
Match: A0A6J1KKF2 (outer envelope pore protein 16-2, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111494835 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.7e-86
Identity = 170/177 (96.05%), Postives = 172/177 (97.18%), Query Frame = 0


Query: 1   MGSRSLENRSMVDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVA 60
           MGSRSLENRSMVDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVA
Sbjct: 1   MGSRSLENRSMVDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVA 60

Query: 61  GSLDSDNGPRPELPGAKKRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYG 120
           GSLDS NGP  EL  A+KRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYG
Sbjct: 61  GSLDSSNGPPLELSSARKRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYG 120

Query: 121 LKEARGAHDWKNSAIAGAVTGVAVALASDDSSHERIIQSAITGAAVSAAANIFAGIF 178
           LKEARGAHDWKNSAIAGAVTGVAVALASDDSSHERI+QSAITGAAVSAAANIFAGIF
Sbjct: 121 LKEARGAHDWKNSAIAGAVTGVAVALASDDSSHERIVQSAITGAAVSAAANIFAGIF 177

[Close]

BLAST of Carg18883 vs. ExPASy TrEMBL
Match: A0A6J1KIT3 (outer envelope pore protein 16-2, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111494835 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.5e-84
Identity = 169/177 (95.48%), Postives = 171/177 (96.61%), Query Frame = 0


Query: 1   MGSRSLENRSMVDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVA 60
           MGSRSLENRSMVDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVA
Sbjct: 1   MGSRSLENRSMVDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVA 60

Query: 61  GSLDSDNGPRPELPGAKKRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYG 120
           GSLDS NGP  EL  A+KRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYG
Sbjct: 61  GSLDSSNGPPLELSSARKRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYG 120

Query: 121 LKEARGAHDWKNSAIAGAVTGVAVALASDDSSHERIIQSAITGAAVSAAANIFAGIF 178
           LKEARGAHDW NSAIAGAVTGVAVALASDDSSHERI+QSAITGAAVSAAANIFAGIF
Sbjct: 121 LKEARGAHDW-NSAIAGAVTGVAVALASDDSSHERIVQSAITGAAVSAAANIFAGIF 176

[Close]

BLAST of Carg18883 vs. ExPASy TrEMBL
Match: A0A0A0KCC7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G307410 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 7.7e-76
Identity = 149/177 (84.18%), Postives = 161/177 (90.96%), Query Frame = 0


Query: 1   MGSRSLENRSMVDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVA 60
           MGSRS++N SMVDEI+CS GGTFLYD GHPLLNRVADSF+KAAGIGALQSVSREAYFTVA
Sbjct: 50  MGSRSIDNLSMVDEIRCSHGGTFLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVA 109

Query: 61  GSLDSDNGPRPELPGAKKRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYG 120
           GS+DS+  P PEL   +K+  PGLKGETNKESLEAMVKSVG+ESIQWGLAAGVYSGLTYG
Sbjct: 110 GSVDSNIAPPPELSSMRKQRFPGLKGETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYG 169

Query: 121 LKEARGAHDWKNSAIAGAVTGVAVALASDDSSHERIIQSAITGAAVSAAANIFAGIF 178
           LKEARGAHDWKNSAIAGAVTGVAVAL +D SSHE I+Q AITGAA+S AANIFAGIF
Sbjct: 170 LKEARGAHDWKNSAIAGAVTGVAVALTADKSSHEHIVQYAITGAAMSTAANIFAGIF 226

[Close]

BLAST of Carg18883 vs. TAIR 10
Match: AT4G16160.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 200.7 bits (509), Expect = 1.0e-51
Identity = 103/172 (59.88%), Postives = 139/172 (80.81%), Query Frame = 0


Query: 9   RSMVDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVAGSLDSDN- 68
           R ++DEI+ S     L+D GHPLLNR+ADSF+KAAG+GALQ+VSREAYFTV    DS+N 
Sbjct: 7   RIVMDEIR-SFEKAHLFDLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGFDSNNV 66

Query: 69  GPRPELPGAKKRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYGLKEAR-G 128
           GP  E+ G KK   P L+GE++K SL+A+VK+ G+ES+QWGLAAG+YSG+TYG+ E R G
Sbjct: 67  GPPSEITGNKKHRFPNLRGESSK-SLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRGG 126

Query: 129 AHDWKNSAIAGAVTGVAVAL-ASDDSSHERIIQSAITGAAVSAAANIFAGIF 178
           AHDW+NSA+AGA+TG A+A+  S+ +SHE+++QSA+TGAA+S AAN+ + +F
Sbjct: 127 AHDWRNSAVAGALTGAAMAMTTSERTSHEQVVQSALTGAAISTAANLLSSVF 176

[Close]

BLAST of Carg18883 vs. TAIR 10
Match: AT4G16160.2 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 196.1 bits (497), Expect = 2.5e-50
Identity = 103/174 (59.20%), Postives = 139/174 (79.89%), Query Frame = 0


Query: 9   RSMVDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTV--AGSLDSD 68
           R ++DEI+ S     L+D GHPLLNR+ADSF+KAAG+GALQ+VSREAYFTV      DS+
Sbjct: 7   RIVMDEIR-SFEKAHLFDLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGAGFDSN 66

Query: 69  N-GPRPELPGAKKRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYGLKEAR 128
           N GP  E+ G KK   P L+GE++K SL+A+VK+ G+ES+QWGLAAG+YSG+TYG+ E R
Sbjct: 67  NVGPPSEITGNKKHRFPNLRGESSK-SLDALVKNTGKESLQWGLAAGLYSGITYGMTEVR 126

Query: 129 -GAHDWKNSAIAGAVTGVAVAL-ASDDSSHERIIQSAITGAAVSAAANIFAGIF 178
            GAHDW+NSA+AGA+TG A+A+  S+ +SHE+++QSA+TGAA+S AAN+ + +F
Sbjct: 127 GGAHDWRNSAVAGALTGAAMAMTTSERTSHEQVVQSALTGAAISTAANLLSSVF 178

[Close]

BLAST of Carg18883 vs. TAIR 10
Match: AT3G62880.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 46.2 bits (108), Expect = 3.1e-05
Identity = 27/76 (35.53%), Postives = 45/76 (59.21%), Query Frame = 0


Query: 96  MVKSVGQESIQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALASDDSSHER 155
           + KS+G+   Q GL +GV++    GL+  RG +DW N+ + GAV G AVA+++   +  +
Sbjct: 52  VAKSIGRFGFQCGLVSGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAIST--RNWTQ 111

Query: 156 IIQSAITGAAVSAAAN 172
           ++  A   +A S  AN
Sbjct: 112 VVGMAGLVSAFSVLAN 125

[Close]

BLAST of Carg18883 vs. TAIR 10
Match: AT3G62880.2 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 46.2 bits (108), Expect = 3.1e-05
Identity = 27/76 (35.53%), Postives = 45/76 (59.21%), Query Frame = 0


Query: 96  MVKSVGQESIQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALASDDSSHER 155
           + KS+G+   Q GL +GV++    GL+  RG +DW N+ + GAV G AVA+++   +  +
Sbjct: 52  VAKSIGRFGFQCGLVSGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAIST--RNWTQ 111

Query: 156 IIQSAITGAAVSAAAN 172
           ++  A   +A S  AN
Sbjct: 112 VVGMAGLVSAFSVLAN 125

The following BLAST results are available for this feature:

BLAST of Carg18883 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7026350.1	6.0e-91	100.00	Outer envelope pore protein 16-2, chloroplastic [Cucurbita argyrosperma subsp. a...	[more]
XP_022930432.1	1.7e-90	98.87	outer envelope pore protein 16-2, chloroplastic-like isoform X1 [Cucurbita mosch...	[more]
KAG6594008.1	3.9e-90	98.31	Outer envelope pore protein 16-2, chloroplastic, partial [Cucurbita argyrosperma...	[more]
XP_022930433.1	1.6e-88	98.31	outer envelope pore protein 16-2, chloroplastic-like isoform X2 [Cucurbita mosch...	[more]
XP_023514075.1	1.4e-87	96.61	outer envelope pore protein 16-2, chloroplastic-like isoform X2 [Cucurbita pepo ...	[more]

BLAST of Carg18883 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WMZ5	3.5e-49	59.20	Outer envelope pore protein 16-2, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q41050	1.1e-15	33.10	Outer envelope pore protein 16, chloroplastic OS=Pisum sativum OX=3888 GN=OEP16 ...	[more]
Q9LZH8	4.4e-04	35.53	Outer envelope pore protein 16-4, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Carg18883 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EQH2	8.5e-91	98.87	outer envelope pore protein 16-2, chloroplastic-like isoform X1 OS=Cucurbita mos...	[more]
A0A6J1EV59	7.9e-89	98.31	outer envelope pore protein 16-2, chloroplastic-like isoform X2 OS=Cucurbita mos...	[more]
A0A6J1KKF2	1.7e-86	96.05	outer envelope pore protein 16-2, chloroplastic-like isoform X1 OS=Cucurbita max...	[more]
A0A6J1KIT3	1.5e-84	95.48	outer envelope pore protein 16-2, chloroplastic-like isoform X2 OS=Cucurbita max...	[more]
A0A0A0KCC7	7.7e-76	84.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G307410 PE=4 SV=1	[more]

BLAST of Carg18883 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16160.1	1.0e-51	59.88	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT4G16160.2	2.5e-50	59.20	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT3G62880.1	3.1e-05	35.53	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT3G62880.2	3.1e-05	35.53	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF02466	Tim17	coord: 32..167 e-value: 5.1E-15 score: 55.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..84
None	No IPR available	PANTHER	PTHR15371	TIM23	coord: 5..177
None	No IPR available	PANTHER	PTHR15371:SF1	OUTER ENVELOPE PORE PROTEIN 16-2, CHLOROPLASTIC	coord: 5..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18883-RA	Carg18883-RA	mRNA