Carg18781 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18781
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Location	Carg_Chr08: 3913050 .. 3915317 (-)
RNA-Seq Expression	Carg18781
Synteny	Carg18781

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCTTATAGCTTGTAGCTTCTTGTTCTTCGTGTTCTTCGTTCGTGTTCTTCGTTCTTCGTTCTTCGTTCGCATAAATTTTTAGAGTTCAAGCTAAACAAATGATGGCTGGAAACCCTAATTGGTGGGGCATGTTTTCACCTTCCTTCTCTTCTTTTGCTGAACAGCCTCAATCATGGAGCCAACTTCTGTTGTATGTTCTTTATTTGGTTCATTTGTTTCTATATGTTCTTCAATATATGTAATTTTGTGATGTCTTTTTGGTGTTATCAGAGGAGAGGAAGAAAGGGTTTTGAACCAAACCCAGATGGGTCATCATTATCAACCAAAAAAGTTGGAGAATTGGGAGCACCAAATCTTGGATCATACCACCACCACCACCACCAATCCTTCACCACCTCCACCCCCTAACTTTGTTGATATTGTCAAACAAGAATTTTCCAACACCAACAAATTTCTTAACTTTTCTTCTAACAATACTAACTTCCCAGATCTCACCCACAATCAACCCCCCGCCGCCGCCGCCGCCGATCACTTGCCAGAGGTGAGATTTAGTTGCAAGTCGTTCGAACAGTCGAACCACATCGCCCCTGTATCGGGTAACGCATGTAAGAAGGCTAGAATTCATCCGCCATCTTCAAGCCAACCACCTCTAAAGGTAACATAAAACAAGTGAAATTTTTCATCTTTGCATCTTTTATATTCATGTTTAAAGTTCGAATTACGAAATAATAGGTGAGGAAGGAGAAACTCGTAGATCGAATAACCGCTCTTCACCAAATCGTTTCTCCGTTCGGAAAGGTAAAACAGTAATTATCAGTAATCACGACCTTCCACAATAGTACGAGGCTTTTAATGCTAGCTTTTATTCCTTTTCACCCATACCCTTTTGCAGACTGATACCGCGTCTGTGCTGTCAGAAGCAATTGGGTATATCAGATTTCTTCAGGGACAAATCGAGGTAATGCCATTTAAAAATGCCATATATGTGTTTGTGGGTATCCTCAAAGTTAACTCCTTCTTGGGGTGGCAGGCACTTAGCTACCCATATCTGCGCAGTGCACCAAAGCATGTGAGGGACGCAGGAAGTGGTGTAAGTATCATACTCTTAAGTGTTTTCATATTATTTTCATGCATTCATTAACATTCATTAAGAACATGAATGGAGATTGTTTAGGAAAGGAAGAGGGGGTTAAGTTTGTGTTGAGAGTCGTAATCATGAAAGTCCAGCATCTGATAGACCATAAAGAAGAGAAATTAAAGGGGTGTGAAAAAAGAATAAGGTTCTCAGCTTTATACATTTCATATCTACTCATTATAAAGTAACCTCAAAAAAGTGTTGCTTTGGGGCTGCCTAATTGTTTTGGAATCCCAAAAAAATTATTATTTCAATAAAATTAAAAAAAAAAAAAAACATTTCTCGTGTTTCAGTTTTGAGTATAATATTCCTTTCGTCGTCGTTCTGTTTGAAAATGTTATATTTTTACTTTAGTTTCTATTTCTTCGTGTGTTTCACAATGTTACGTTCTTTTAGGTACATATTATTCTCGAATTTTCAAAGACGATTCAATTTTAATTAAAAAAAAAAATACTCCCATAAGACTCGATAACCCGACTAATTCGTACTAATCAACCTAAACCATAAAACTTAGGTTTAGGGTTTAGGGTTCATAGGTGGGGTTAGATTTTTTTTTACCGTTTGGGTTAGGTTGAATTTTTGAAAAATTGAAAATTTTGATTCTATTTGTGGGTTAACATTTTTTGATCAGGTCATTCCGATCAACTCAAAAGTAGGGTTACAACTCAATTCTATTTTTAAAAAATTAAGAAGATTTAATGTTAGTAACAGGTATTAGTGATGCATTGACACTTGTAATATATTTGATGTAAGGATAAGTACAGTCCAACCCGATAATAGAGGGTTAAATTGGGTTGAGTTGAACTGAGTTGTGAGCTCTATTCAAATTGTTTGGATCTTTCGGACTCTATTGTGGTTGCTTGAGCTACTGACCCAACGAACCAGAAATTTTAGTAATGAAATGGGTTTGATTTCCAGGGAGAAGAAATGAGAAGGGAAGAGAAGGCAGTGAAGGAGTTGAGGAGCAGAGGGCTGTGCTTGGTTCCAGTCTCATGCACACAACTGGTTGGAGGGGACAACAATGGAGCTGCATACTGGGCTCCTGCTTATGGAAATGGGTTTTGATTTAATTTTAATTACAGCTCCTAATCATCAACAATTAAAGCTTTGGGAAATGGCTTAATTAGTATT

mRNA sequence

AATCTTATAGCTTGTAGCTTCTTGTTCTTCGTGTTCTTCGTTCGTGTTCTTCGTTCTTCGTTCTTCGTTCGCATAAATTTTTAGAGTTCAAGCTAAACAAATGATGGCTGGAAACCCTAATTGGTGGGGCATGTTTTCACCTTCCTTCTCTTCTTTTGCTGAACAGCCTCAATCATGGAGCCAACTTCTGTTAGGAGAGGAAGAAAGGGTTTTGAACCAAACCCAGATGGGTCATCATTATCAACCAAAAAAGTTGGAGAATTGGGAGCACCAAATCTTGGATCATACCACCACCACCACCACCAATCCTTCACCACCTCCACCCCCTAACTTTGTTGATATTGTCAAACAAGAATTTTCCAACACCAACAAATTTCTTAACTTTTCTTCTAACAATACTAACTTCCCAGATCTCACCCACAATCAACCCCCCGCCGCCGCCGCCGCCGATCACTTGCCAGAGGTGAGATTTAGTTGCAAGTCGTTCGAACAGTCGAACCACATCGCCCCTGTATCGGGTAACGCATGTAAGAAGGCTAGAATTCATCCGCCATCTTCAAGCCAACCACCTCTAAAGGTGAGGAAGGAGAAACTCGTAGATCGAATAACCGCTCTTCACCAAATCGTTTCTCCGTTCGGAAAGACTGATACCGCGTCTGTGCTGTCAGAAGCAATTGGGTATATCAGATTTCTTCAGGGACAAATCGAGGCACTTAGCTACCCATATCTGCGCAGTGCACCAAAGCATGTGAGGGACGCAGGAAGTGGTGGAGAAGAAATGAGAAGGGAAGAGAAGGCAGTGAAGGAGTTGAGGAGCAGAGGGCTGTGCTTGGTTCCAGTCTCATGCACACAACTGGTTGGAGGGGACAACAATGGAGCTGCATACTGGGCTCCTGCTTATGGAAATGGGTTTTGATTTAATTTTAATTACAGCTCCTAATCATCAACAATTAAAGCTTTGGGAAATGGCTTAATTAGTATT

Coding sequence (CDS)

ATGATGGCTGGAAACCCTAATTGGTGGGGCATGTTTTCACCTTCCTTCTCTTCTTTTGCTGAACAGCCTCAATCATGGAGCCAACTTCTGTTAGGAGAGGAAGAAAGGGTTTTGAACCAAACCCAGATGGGTCATCATTATCAACCAAAAAAGTTGGAGAATTGGGAGCACCAAATCTTGGATCATACCACCACCACCACCACCAATCCTTCACCACCTCCACCCCCTAACTTTGTTGATATTGTCAAACAAGAATTTTCCAACACCAACAAATTTCTTAACTTTTCTTCTAACAATACTAACTTCCCAGATCTCACCCACAATCAACCCCCCGCCGCCGCCGCCGCCGATCACTTGCCAGAGGTGAGATTTAGTTGCAAGTCGTTCGAACAGTCGAACCACATCGCCCCTGTATCGGGTAACGCATGTAAGAAGGCTAGAATTCATCCGCCATCTTCAAGCCAACCACCTCTAAAGGTGAGGAAGGAGAAACTCGTAGATCGAATAACCGCTCTTCACCAAATCGTTTCTCCGTTCGGAAAGACTGATACCGCGTCTGTGCTGTCAGAAGCAATTGGGTATATCAGATTTCTTCAGGGACAAATCGAGGCACTTAGCTACCCATATCTGCGCAGTGCACCAAAGCATGTGAGGGACGCAGGAAGTGGTGGAGAAGAAATGAGAAGGGAAGAGAAGGCAGTGAAGGAGTTGAGGAGCAGAGGGCTGTGCTTGGTTCCAGTCTCATGCACACAACTGGTTGGAGGGGACAACAATGGAGCTGCATACTGGGCTCCTGCTTATGGAAATGGGTTTTGA

Protein sequence

MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMGHHYQPKKLENWEHQILDHTTTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSNNTNFPDLTHNQPPAAAAADHLPEVRFSCKSFEQSNHIAPVSGNACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFGKTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDAGSGGEEMRREEKAVKELRSRGLCLVPVSCTQLVGGDNNGAAYWAPAYGNGF

Homology

[Close]

BLAST of Carg18781 vs. NCBI nr
Match: KAG7025815.1 (Transcription factor bHLH68 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 557.4 bits (1435), Expect = 6.9e-155
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMGHHYQPKKLENWEHQIL 60
           MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMGHHYQPKKLENWEHQIL
Sbjct: 1   MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMGHHYQPKKLENWEHQIL 60

Query: 61  DHTTTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSNNTNFPDLTHNQPPAAAAADHLP 120
           DHTTTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSNNTNFPDLTHNQPPAAAAADHLP
Sbjct: 61  DHTTTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSNNTNFPDLTHNQPPAAAAADHLP 120

Query: 121 EVRFSCKSFEQSNHIAPVSGNACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFG 180
           EVRFSCKSFEQSNHIAPVSGNACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFG
Sbjct: 121 EVRFSCKSFEQSNHIAPVSGNACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFG 180

Query: 181 KTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDAGSGGEEMRREEKAVKELRSR 240
           KTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDAGSGGEEMRREEKAVKELRSR
Sbjct: 181 KTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDAGSGGEEMRREEKAVKELRSR 240

Query: 241 GLCLVPVSCTQLVGGDNNGAAYWAPAYGNGF 272
           GLCLVPVSCTQLVGGDNNGAAYWAPAYGNGF
Sbjct: 241 GLCLVPVSCTQLVGGDNNGAAYWAPAYGNGF 271

[Close]

BLAST of Carg18781 vs. NCBI nr
Match: KAG6593472.1 (Transcription factor basic helix-loop-helix 68, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 549.7 bits (1415), Expect = 1.4e-152
Identity = 270/272 (99.26%), Postives = 270/272 (99.26%), Query Frame = 0


Query: 1   MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMGHHYQPKKLENWEHQIL 60
           MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMGHHYQPKKLENWEHQIL
Sbjct: 1   MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMGHHYQPKKLENWEHQIL 60

Query: 61  DH-TTTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSNNTNFPDLTHNQPPAAAAADHL 120
           DH TTTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSNNTNFPDLTHNQPPAAAAADHL
Sbjct: 61  DHTTTTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSNNTNFPDLTHNQPPAAAAADHL 120

Query: 121 PEVRFSCKSFEQSNHIAPVSGNACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPF 180
           PEVRFSCKSFEQSNHIAPVSGNACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPF
Sbjct: 121 PEVRFSCKSFEQSNHIAPVSGNACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPF 180

Query: 181 GKTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDAGSGGEEMRREEKAVKELRS 240
           GKTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDAGSGGEEMRREEKAVKELRS
Sbjct: 181 GKTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDAGSGGEEMRREEKAVKELRS 240

Query: 241 RGLCLVPVSCTQLVGGDNNGAAYWAPAYGNGF 272
           RGLCLVPVSCTQLVGGDNNGAAYWAPAYGN F
Sbjct: 241 RGLCLVPVSCTQLVGGDNNGAAYWAPAYGNEF 272

[Close]

BLAST of Carg18781 vs. NCBI nr
Match: XP_022964017.1 (transcription factor bHLH68-like [Cucurbita moschata])

HSP 1 Score: 527.7 bits (1358), Expect = 5.9e-146
Identity = 264/271 (97.42%), Postives = 265/271 (97.79%), Query Frame = 0


Query: 1   MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMGHHYQPKKLENWEHQIL 60
           MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMG HYQPKKLENWEHQIL
Sbjct: 1   MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMG-HYQPKKLENWEHQIL 60

Query: 61  DHTTTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSNNTNFPDLTHNQPPAAAAADHLP 120
           DH  TTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSNNTNFPDLTHNQP  AAAADHLP
Sbjct: 61  DH--TTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSNNTNFPDLTHNQP--AAAADHLP 120

Query: 121 EVRFSCKSFEQSNHIAPVSGNACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFG 180
           EVRFSCKSFEQ NHIAPVSG+ACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFG
Sbjct: 121 EVRFSCKSFEQLNHIAPVSGSACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFG 180

Query: 181 KTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDAGSGGEEMRREEKAVKELRSR 240
           KTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDAGSGGEEMRREEKAVKELRSR
Sbjct: 181 KTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDAGSGGEEMRREEKAVKELRSR 240

Query: 241 GLCLVPVSCTQLVGGDNNGAAYWAPAYGNGF 272
           GLCLVPVSCTQLVGGDNNGAAYWAPAYGNGF
Sbjct: 241 GLCLVPVSCTQLVGGDNNGAAYWAPAYGNGF 266

[Close]

BLAST of Carg18781 vs. NCBI nr
Match: XP_023000383.1 (transcription factor bHLH68-like [Cucurbita maxima])

HSP 1 Score: 526.6 bits (1355), Expect = 1.3e-145
Identity = 261/271 (96.31%), Postives = 265/271 (97.79%), Query Frame = 0


Query: 1   MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMGHHYQPKKLENWEHQIL 60
           MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMG HYQPKKLENWEHQIL
Sbjct: 1   MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMG-HYQPKKLENWEHQIL 60

Query: 61  DHTTTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSNNTNFPDLTHNQPPAAAAADHLP 120
           DH TTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSNNTNFPDL HNQP   AAADHLP
Sbjct: 61  DH-TTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSNNTNFPDLIHNQP--TAAADHLP 120

Query: 121 EVRFSCKSFEQSNHIAPVSGNACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFG 180
           EVRFSCKSFEQSNHIAP+SG+ACKKAR+HPPSSSQPPLKVRKEKLVDRITALHQIVSPFG
Sbjct: 121 EVRFSCKSFEQSNHIAPISGSACKKARVHPPSSSQPPLKVRKEKLVDRITALHQIVSPFG 180

Query: 181 KTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDAGSGGEEMRREEKAVKELRSR 240
           KTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRD+GSGGEEMRREEKAVKELRSR
Sbjct: 181 KTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDSGSGGEEMRREEKAVKELRSR 240

Query: 241 GLCLVPVSCTQLVGGDNNGAAYWAPAYGNGF 272
           GLCLVPVSCTQLVGGDNNGAAYWAPAYGNGF
Sbjct: 241 GLCLVPVSCTQLVGGDNNGAAYWAPAYGNGF 267

[Close]

BLAST of Carg18781 vs. NCBI nr
Match: XP_023515291.1 (transcription factor bHLH68-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 518.5 bits (1334), Expect = 3.6e-143
Identity = 259/271 (95.57%), Postives = 262/271 (96.68%), Query Frame = 0


Query: 1   MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMGHHYQPKKLENWEHQIL 60
           MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMG HYQPKKLENWEHQIL
Sbjct: 1   MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMG-HYQPKKLENWEHQIL 60

Query: 61  DHTTTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSNNTNFPDLTHNQPPAAAAADHLP 120
           DH  TTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSS+NTNFPDLTHNQP     A HLP
Sbjct: 61  DH--TTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSHNTNFPDLTHNQP-----AHHLP 120

Query: 121 EVRFSCKSFEQSNHIAPVSGNACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFG 180
           EVRFSCKSFEQSNHIAPVSG+ACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFG
Sbjct: 121 EVRFSCKSFEQSNHIAPVSGSACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFG 180

Query: 181 KTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDAGSGGEEMRREEKAVKELRSR 240
           KTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRD+GSGGEEMRREEKAVKELRSR
Sbjct: 181 KTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDSGSGGEEMRREEKAVKELRSR 240

Query: 241 GLCLVPVSCTQLVGGDNNGAAYWAPAYGNGF 272
           GLCLVPVSCTQLVGGDNNGAAYWAPAYGNGF
Sbjct: 241 GLCLVPVSCTQLVGGDNNGAAYWAPAYGNGF 263

[Close]

BLAST of Carg18781 vs. ExPASy Swiss-Prot
Match: Q8S3D1 (Transcription factor bHLH68 OS=Arabidopsis thaliana OX=3702 GN=BHLH68 PE=1 SV=2)

HSP 1 Score: 169.1 bits (427), Expect = 6.9e-41
Identity = 127/326 (38.96%), Postives = 160/326 (49.08%), Query Frame = 0


Query: 13  SPSFSSFAEQ----PQSWS-------QLLLGEEERVLNQTQMGHH-------YQPK-KLE 72
           +P+ SS+ E     P+SWS        L++GEEER+       HH       +Q K +LE
Sbjct: 86  NPNLSSWLESNDLPPESWSLSQLLLGGLMMGEEERLEMMNHHNHHDEQQHHGFQGKIRLE 145

Query: 73  NWEHQILDHTTTTTTN-----------------PSPPPPPNFVDIVKQEFSNTNKFLNFS 132
           NWE Q+L H   +                     SP  PPN   +     ++ N   +  
Sbjct: 146 NWEEQVLSHQQASMVAVDIKQEGNINNNNGYVISSPNSPPNKSCVTTTTTTSLNSNDDNI 205

Query: 133 SNNTNFPDLTHNQPPA-AAAADHLPEVRFS-CKSFEQSNHIAPVSGNACKKARIHPPSSS 192
           +NN N  D + N      +   H P  R S C S E       + G+  KK R+ P  SS
Sbjct: 206 NNNNNMLDFSSNHNGLHLSEGRHTPPDRSSECNSLE-------IGGSTNKKPRLQPSPSS 265

Query: 193 QPPLKVRKEKLVDRITALHQIVSPFGKTDTASVLSEAIGYIRFLQGQIEALSYPYLRSA- 252
           Q  LKVRKEKL  RI ALHQ+VSPFGKTDTASVLSEAIGYIRFLQ QIEALS+PY  +  
Sbjct: 266 QSTLKVRKEKLGGRIAALHQLVSPFGKTDTASVLSEAIGYIRFLQSQIEALSHPYFGTTA 325

Query: 253 ------PKHVRD------------------------AGSGGEEMRREEKAVKELRSRGLC 270
                  +H++                         + S  +     E+  K+LRSRGLC
Sbjct: 326 SGNMRHQQHLQGDRSCIFPEDPGQLVNDQCMKRRGASSSSTDNQNASEEPKKDLRSRGLC 385

[Close]

BLAST of Carg18781 vs. ExPASy Swiss-Prot
Match: Q7XHI5 (Transcription factor bHLH133 OS=Arabidopsis thaliana OX=3702 GN=BHLH133 PE=1 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 5.5e-38
Identity = 123/314 (39.17%), Postives = 157/314 (50.00%), Query Frame = 0


Query: 13  SPSFSSFAE-------QPQSWSQLLL-----GEEERVLNQTQMGHH--------YQPKKL 72
           +P+FSS+ E       QP S SQLLL     GEEE++     M HH        YQ K++
Sbjct: 75  NPNFSSWLEMSDLPLDQPWSLSQLLLGGLMMGEEEKM---EMMNHHHHQNQHQSYQAKRI 134

Query: 73  ENWEHQILDHTTTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSNNTNFPDLTHNQPPA 132
           +NWE Q+L H  +                +KQE SN N +   SS N+         PP 
Sbjct: 135 QNWEEQVLRHQAS----------------MKQESSNNNSYGIMSSPNS---------PPN 194

Query: 133 AAAA-------DHLPEVRFSCKSFEQSNHIAPVSGNACKKARIHPPSSSQPPLKVRKEKL 192
            + A       D+   +       E ++     S  A KK ++  P SSQ  LKVRKEKL
Sbjct: 195 KSCATIINTNEDNNNNIHSGLNLSECNSSEMIGSSFANKKPKLQVP-SSQSTLKVRKEKL 254

Query: 193 VDRITALHQIVSPFGKTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKH--------- 252
             RI +LHQ+VSPFGKTDTASVLSEAIGYIRFL  QIEALS PY  +  ++         
Sbjct: 255 GGRIASLHQLVSPFGKTDTASVLSEAIGYIRFLHSQIEALSLPYFGTPSRNNMMHQHAQR 314

Query: 253 ----------------------VRDAGSGGEEMRREEKAVKELRSRGLCLVPVSCTQLVG 269
                                 V  + +  ++    E+ +K+LRSRGLCLVP+SCT  VG
Sbjct: 315 NMNGIFPEDPGQLVNEYCMKRGVSLSSTDNQKSNPNEEPMKDLRSRGLCLVPISCTLQVG 358

[Close]

BLAST of Carg18781 vs. ExPASy Swiss-Prot
Match: Q9SFZ3 (Transcription factor bHLH110 OS=Arabidopsis thaliana OX=3702 GN=BHLH110 PE=2 SV=2)

HSP 1 Score: 128.3 bits (321), Expect = 1.4e-28
Identity = 74/139 (53.24%), Postives = 88/139 (63.31%), Query Frame = 0


Query: 141 NACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFGKTDTASVLSEAIGYIRFLQG 200
           NA KK R+   SS  PP KVRKEKL DRI AL Q+VSPFGKTDTASVL EAIGYI+FLQ 
Sbjct: 315 NASKKPRVESRSSC-PPFKVRKEKLGDRIAALQQLVSPFGKTDTASVLMEAIGYIKFLQS 374

Query: 201 QIEALSYPYLRSAPKHVRDAGS-GGEEMRREEKAVKELRSRGLCLVPVSCTQLVGGDNN- 260
           QIE LS PY+R++      A     +    +E+  ++LRSRGLCLVP+SC   V GD   
Sbjct: 375 QIETLSVPYMRASRNRPGKASQLVSQSQEGDEEETRDLRSRGLCLVPLSCMTYVTGDGGD 434

Query: 261 -----GAAYW--APAYGNG 271
                G  +W   P +G G
Sbjct: 435 GGGGVGTGFWPTPPGFGGG 452

[Close]

BLAST of Carg18781 vs. ExPASy Swiss-Prot
Match: Q9FYJ6 (Transcription factor bHLH111 OS=Arabidopsis thaliana OX=3702 GN=BHLH111 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.9e-24
Identity = 64/151 (42.38%), Postives = 87/151 (57.62%), Query Frame = 0


Query: 119 LPEVRFSCKSFEQSNHIAPVSGNACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSP 178
           L  VR    +  +      +S    KKA+    S+  P  ++ K KL D+IT L QIVSP
Sbjct: 165 LAAVRLGTTNAGKKKRCEEISDEVSKKAKCSEGSTLSPEKELPKAKLRDKITTLQQIVSP 224

Query: 179 FGKTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDAGSGGEEMRREEKAVK--E 238
           FGKTDTASVL EAI YI F Q Q++ LS PY++++   ++D   G +     ++  K  +
Sbjct: 225 FGKTDTASVLQEAITYINFYQEQVKLLSTPYMKNS--SMKDPWGGWDREDHNKRGPKHLD 284

Query: 239 LRSRGLCLVPVSCTQLVGGDNNGAAYWAPAY 268
           LRSRGLCLVP+S T +   DN+   YW P Y
Sbjct: 285 LRSRGLCLVPISYTPIAYRDNSATDYWNPTY 313

[Close]

BLAST of Carg18781 vs. ExPASy Swiss-Prot
Match: Q94JL3 (Transcription factor bHLH112 OS=Arabidopsis thaliana OX=3702 GN=BHLH112 PE=1 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.9e-24
Identity = 74/186 (39.78%), Postives = 101/186 (54.30%), Query Frame = 0


Query: 87  SNTNKFLNFSSNNTNFPDLTHNQ--PPAAAAADHLPEVRFSCKSFEQSNHIAPVSGN--A 146
           +N+  F N SS+ TN  + T +         +  L +   + K+  QS  +     N  A
Sbjct: 206 ANSRPFWN-SSSTTNLNNTTPSNFVTTPQIISTRLEDKTKNLKTRAQSESLKRAKDNESA 265

Query: 147 CKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFGKTDTASVLSEAIGYIRFLQGQI 206
            KK R+  P S  P  KVRKE L D+IT+L Q+VSPFGKTDTASVL EAI YI+FL  Q+
Sbjct: 266 AKKPRVTTP-SPLPTFKVRKENLRDQITSLQQLVSPFGKTDTASVLQEAIEYIKFLHDQV 325

Query: 207 EALSYPYLRSAPKHVRDAGSGGEEMRREEKAVKELRSRGLCLVPVSCTQLVGGDNNGAAY 266
             LS PY++    + +     G+   ++E    ELR  GLCLVP+S T  V  +   A +
Sbjct: 326 TVLSTPYMKQGASNQQQQQISGKSKSQDENENHELRGHGLCLVPISSTFPVANETT-ADF 385

Query: 267 WAPAYG 269
           W P +G
Sbjct: 386 WTPTFG 388

[Close]

BLAST of Carg18781 vs. ExPASy TrEMBL
Match: A0A6J1HGP4 (transcription factor bHLH68-like OS=Cucurbita moschata OX=3662 GN=LOC111464167 PE=4 SV=1)

HSP 1 Score: 527.7 bits (1358), Expect = 2.8e-146
Identity = 264/271 (97.42%), Postives = 265/271 (97.79%), Query Frame = 0


Query: 1   MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMGHHYQPKKLENWEHQIL 60
           MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMG HYQPKKLENWEHQIL
Sbjct: 1   MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMG-HYQPKKLENWEHQIL 60

Query: 61  DHTTTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSNNTNFPDLTHNQPPAAAAADHLP 120
           DH  TTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSNNTNFPDLTHNQP  AAAADHLP
Sbjct: 61  DH--TTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSNNTNFPDLTHNQP--AAAADHLP 120

Query: 121 EVRFSCKSFEQSNHIAPVSGNACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFG 180
           EVRFSCKSFEQ NHIAPVSG+ACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFG
Sbjct: 121 EVRFSCKSFEQLNHIAPVSGSACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFG 180

Query: 181 KTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDAGSGGEEMRREEKAVKELRSR 240
           KTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDAGSGGEEMRREEKAVKELRSR
Sbjct: 181 KTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDAGSGGEEMRREEKAVKELRSR 240

Query: 241 GLCLVPVSCTQLVGGDNNGAAYWAPAYGNGF 272
           GLCLVPVSCTQLVGGDNNGAAYWAPAYGNGF
Sbjct: 241 GLCLVPVSCTQLVGGDNNGAAYWAPAYGNGF 266

[Close]

BLAST of Carg18781 vs. ExPASy TrEMBL
Match: A0A6J1KMG6 (transcription factor bHLH68-like OS=Cucurbita maxima OX=3661 GN=LOC111494639 PE=4 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 6.3e-146
Identity = 261/271 (96.31%), Postives = 265/271 (97.79%), Query Frame = 0


Query: 1   MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMGHHYQPKKLENWEHQIL 60
           MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMG HYQPKKLENWEHQIL
Sbjct: 1   MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMG-HYQPKKLENWEHQIL 60

Query: 61  DHTTTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSNNTNFPDLTHNQPPAAAAADHLP 120
           DH TTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSNNTNFPDL HNQP   AAADHLP
Sbjct: 61  DH-TTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSNNTNFPDLIHNQP--TAAADHLP 120

Query: 121 EVRFSCKSFEQSNHIAPVSGNACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFG 180
           EVRFSCKSFEQSNHIAP+SG+ACKKAR+HPPSSSQPPLKVRKEKLVDRITALHQIVSPFG
Sbjct: 121 EVRFSCKSFEQSNHIAPISGSACKKARVHPPSSSQPPLKVRKEKLVDRITALHQIVSPFG 180

Query: 181 KTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDAGSGGEEMRREEKAVKELRSR 240
           KTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRD+GSGGEEMRREEKAVKELRSR
Sbjct: 181 KTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDSGSGGEEMRREEKAVKELRSR 240

Query: 241 GLCLVPVSCTQLVGGDNNGAAYWAPAYGNGF 272
           GLCLVPVSCTQLVGGDNNGAAYWAPAYGNGF
Sbjct: 241 GLCLVPVSCTQLVGGDNNGAAYWAPAYGNGF 267

[Close]

BLAST of Carg18781 vs. ExPASy TrEMBL
Match: A0A6J1CYC1 (transcription factor bHLH68-like OS=Momordica charantia OX=3673 GN=LOC111015393 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 3.8e-82
Identity = 193/327 (59.02%), Postives = 214/327 (65.44%), Query Frame = 0


Query: 1   MMAGNPNWWGMFSPSFSSFAE---------------QPQSWSQLLLGEEERVL-NQTQMG 60
           MMAGNPNWW +F PS SS +                 P SWSQLLLG+E+RV+ NQTQMG
Sbjct: 1   MMAGNPNWWAIFPPSSSSSSSSLFPPQFPSNFSDHLHPHSWSQLLLGDEDRVINNQTQMG 60

Query: 61  HHYQPKKLENWEHQILDHTTTTTTNPSPPPPPNFVDIVKQEFSN---------------- 120
            HYQPK LENWE QIL++    +        PNFVDIVKQE SN                
Sbjct: 61  -HYQPKNLENWEDQILNNNHNQS--------PNFVDIVKQEVSNNRDQSLILQPDSTLTS 120

Query: 121 ----TNKFLNFSSNNTNFPDLTHNQPPAAAAADHLPEVRFSCKSFEQSNHIAPVSGNACK 180
               +NKFLNF+ NN+N PD   NQ    +A+ H PE          SN  A  SG ACK
Sbjct: 121 SSSHSNKFLNFTYNNSN-PDHNINQ----SASQHSPE----------SNRSA-ASGGACK 180

Query: 181 KARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFGKTDTASVLSEAIGYIRFLQGQIEA 240
           KAR+HPPSSSQPPLKVRKEKLVDRITALHQIVSPFGKTDTASVLSEAIGYIRFLQGQIEA
Sbjct: 181 KARVHPPSSSQPPLKVRKEKLVDRITALHQIVSPFGKTDTASVLSEAIGYIRFLQGQIEA 240

Query: 241 LSYPYLR-SAPKHVRDAG----------------SGGEEMRREE---KAVKELRSRGLCL 272
           LSYPYLR SAPK +R++                 + GEEM  +E   K +K+LRSRGLCL
Sbjct: 241 LSYPYLRSSAPKDLRNSQQPALLNDSCPRRKATLNQGEEMMNQEKPLKPLKDLRSRGLCL 300

[Close]

BLAST of Carg18781 vs. ExPASy TrEMBL
Match: A0A0A0K957 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G447040 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 8.2e-77
Identity = 179/285 (62.81%), Postives = 203/285 (71.23%), Query Frame = 0


Query: 1   MMAGNPNWWGMFSP-SFSSFAE-QPQSWSQLLLGEEERVLNQTQMGHHYQPKKLENWEHQ 60
           MMAGNPNWW MF P SFSSFA+ QPQSWSQLLLG+E+RVLNQTQM  HYQPKKLENWE Q
Sbjct: 1   MMAGNPNWWAMFPPSSFSSFADHQPQSWSQLLLGDEDRVLNQTQMS-HYQPKKLENWEDQ 60

Query: 61  ILDHTTTTTTNPSPPPPPNFVD--IVKQE----------------FSNTNKFLNFSSN-N 120
           IL++  T++   S      FVD  IVKQ+                  +TNKFL+FSSN N
Sbjct: 61  ILNNNITSS---SQFEASTFVDNIIVKQQQLHSNNNILHPNTIISSHHTNKFLDFSSNTN 120

Query: 121 TNFPDLTHNQ---PPAAAAADHLPEVRFSCKSFEQSNHIAPVSGNACKKARIHPPSSSQP 180
            N  D   N     PAA   DHL E           N     +G ACKKAR+HPPSSSQP
Sbjct: 121 NNNQDHNTNHLALRPAAPDPDHLSE--------SSKNQSIGSTGGACKKARVHPPSSSQP 180

Query: 181 PLKVRKEKLVDRITALHQIVSPFGKTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKH 240
           PLKVRKEKLVDRITALHQIVSPFGKTDTASVLSEAIGYIRFLQGQIEALSYPYL+SAPK 
Sbjct: 181 PLKVRKEKLVDRITALHQIVSPFGKTDTASVLSEAIGYIRFLQGQIEALSYPYLQSAPKD 240

Query: 241 VRDA-GSGGEEMRR---EEKAVKELRSRGLCLVPVSCTQLVGGDN 258
           +R++   GGEEM +   E++ +K+LRS+GLCLVP+SCT LVG D+
Sbjct: 241 LRNSQPMGGEEMMKNEDEKRLMKDLRSKGLCLVPLSCTHLVGADH 273

[Close]

BLAST of Carg18781 vs. ExPASy TrEMBL
Match: A0A5D3BYE2 (Transcription factor bHLH68-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G002120 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 7.6e-67
Identity = 168/303 (55.45%), Postives = 194/303 (64.03%), Query Frame = 0


Query: 1   MMAGNPNWWGMFSP-SFSSFAE-QPQSWSQLLLGEEERVLNQTQMGHHYQPKKLENWEHQ 60
           MMAGNPNWW MF P SF+SFA+ QPQSWSQLLLG+E+RVLNQTQM  HYQPKKLENWE Q
Sbjct: 1   MMAGNPNWWAMFPPSSFNSFADHQPQSWSQLLLGDEDRVLNQTQMS-HYQPKKLENWEDQ 60

Query: 61  ILDHTTTTTTNPSPPPPPNFVD--IVKQEF---------------SNTNKFLNFSSNNTN 120
           IL++  T++   S     NFVD  IVKQ+                 +TNKFL+FSS+  N
Sbjct: 61  ILNNNNTSS---SQFEASNFVDNIIVKQQLHSTNNNILHPTSISSHHTNKFLDFSSHTNN 120

Query: 121 FPDLTHNQPPAAAAADHLPEVRFSCKSFEQSNHIAPVSGNACKKARIHPPSSSQPPLKVR 180
             D   N     AA    P+   S +S  +++ +   +G ACKKAR+HPPSSSQPPLKVR
Sbjct: 121 NQDHNTNHLALRAAG---PDPDHSSES-SKNHSVGGSTGGACKKARVHPPSSSQPPLKVR 180

Query: 181 KEKLVDRITALHQIVSPFGKTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDAG 240
           KEKLVDRITALHQIVSPFGKTDTASVLSEAIGYIRFLQGQIE                  
Sbjct: 181 KEKLVDRITALHQIVSPFGKTDTASVLSEAIGYIRFLQGQIE------------------ 240

Query: 241 SGGEEMRREE---KAVKELRSRGLCLVPVSCTQLVGGD----------NNGAAYWAPAYG 272
             GEEM + E   + VK+LRS+GLCLVP+SCT LVG D          NN     AP Y 
Sbjct: 241 --GEEMMKNEDQKRLVKDLRSKGLCLVPLSCTHLVGADHHSNHNNINNNNNNINIAPPYW 275

[Close]

BLAST of Carg18781 vs. TAIR 10
Match: AT4G29100.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 169.1 bits (427), Expect = 4.9e-42
Identity = 127/326 (38.96%), Postives = 160/326 (49.08%), Query Frame = 0


Query: 13  SPSFSSFAEQ----PQSWS-------QLLLGEEERVLNQTQMGHH-------YQPK-KLE 72
           +P+ SS+ E     P+SWS        L++GEEER+       HH       +Q K +LE
Sbjct: 86  NPNLSSWLESNDLPPESWSLSQLLLGGLMMGEEERLEMMNHHNHHDEQQHHGFQGKIRLE 145

Query: 73  NWEHQILDHTTTTTTN-----------------PSPPPPPNFVDIVKQEFSNTNKFLNFS 132
           NWE Q+L H   +                     SP  PPN   +     ++ N   +  
Sbjct: 146 NWEEQVLSHQQASMVAVDIKQEGNINNNNGYVISSPNSPPNKSCVTTTTTTSLNSNDDNI 205

Query: 133 SNNTNFPDLTHNQPPA-AAAADHLPEVRFS-CKSFEQSNHIAPVSGNACKKARIHPPSSS 192
           +NN N  D + N      +   H P  R S C S E       + G+  KK R+ P  SS
Sbjct: 206 NNNNNMLDFSSNHNGLHLSEGRHTPPDRSSECNSLE-------IGGSTNKKPRLQPSPSS 265

Query: 193 QPPLKVRKEKLVDRITALHQIVSPFGKTDTASVLSEAIGYIRFLQGQIEALSYPYLRSA- 252
           Q  LKVRKEKL  RI ALHQ+VSPFGKTDTASVLSEAIGYIRFLQ QIEALS+PY  +  
Sbjct: 266 QSTLKVRKEKLGGRIAALHQLVSPFGKTDTASVLSEAIGYIRFLQSQIEALSHPYFGTTA 325

Query: 253 ------PKHVRD------------------------AGSGGEEMRREEKAVKELRSRGLC 270
                  +H++                         + S  +     E+  K+LRSRGLC
Sbjct: 326 SGNMRHQQHLQGDRSCIFPEDPGQLVNDQCMKRRGASSSSTDNQNASEEPKKDLRSRGLC 385

[Close]

BLAST of Carg18781 vs. TAIR 10
Match: AT2G20100.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 159.5 bits (402), Expect = 3.9e-39
Identity = 123/314 (39.17%), Postives = 157/314 (50.00%), Query Frame = 0


Query: 13  SPSFSSFAE-------QPQSWSQLLL-----GEEERVLNQTQMGHH--------YQPKKL 72
           +P+FSS+ E       QP S SQLLL     GEEE++     M HH        YQ K++
Sbjct: 75  NPNFSSWLEMSDLPLDQPWSLSQLLLGGLMMGEEEKM---EMMNHHHHQNQHQSYQAKRI 134

Query: 73  ENWEHQILDHTTTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSNNTNFPDLTHNQPPA 132
           +NWE Q+L H  +                +KQE SN N +   SS N+         PP 
Sbjct: 135 QNWEEQVLRHQAS----------------MKQESSNNNSYGIMSSPNS---------PPN 194

Query: 133 AAAA-------DHLPEVRFSCKSFEQSNHIAPVSGNACKKARIHPPSSSQPPLKVRKEKL 192
            + A       D+   +       E ++     S  A KK ++  P SSQ  LKVRKEKL
Sbjct: 195 KSCATIINTNEDNNNNIHSGLNLSECNSSEMIGSSFANKKPKLQVP-SSQSTLKVRKEKL 254

Query: 193 VDRITALHQIVSPFGKTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKH--------- 252
             RI +LHQ+VSPFGKTDTASVLSEAIGYIRFL  QIEALS PY  +  ++         
Sbjct: 255 GGRIASLHQLVSPFGKTDTASVLSEAIGYIRFLHSQIEALSLPYFGTPSRNNMMHQHAQR 314

Query: 253 ----------------------VRDAGSGGEEMRREEKAVKELRSRGLCLVPVSCTQLVG 269
                                 V  + +  ++    E+ +K+LRSRGLCLVP+SCT  VG
Sbjct: 315 NMNGIFPEDPGQLVNEYCMKRGVSLSSTDNQKSNPNEEPMKDLRSRGLCLVPISCTLQVG 358

[Close]

BLAST of Carg18781 vs. TAIR 10
Match: AT1G27660.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 128.3 bits (321), Expect = 9.7e-30
Identity = 74/139 (53.24%), Postives = 88/139 (63.31%), Query Frame = 0


Query: 141 NACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFGKTDTASVLSEAIGYIRFLQG 200
           NA KK R+   SS  PP KVRKEKL DRI AL Q+VSPFGKTDTASVL EAIGYI+FLQ 
Sbjct: 315 NASKKPRVESRSSC-PPFKVRKEKLGDRIAALQQLVSPFGKTDTASVLMEAIGYIKFLQS 374

Query: 201 QIEALSYPYLRSAPKHVRDAGS-GGEEMRREEKAVKELRSRGLCLVPVSCTQLVGGDNN- 260
           QIE LS PY+R++      A     +    +E+  ++LRSRGLCLVP+SC   V GD   
Sbjct: 375 QIETLSVPYMRASRNRPGKASQLVSQSQEGDEEETRDLRSRGLCLVPLSCMTYVTGDGGD 434

Query: 261 -----GAAYW--APAYGNG 271
                G  +W   P +G G
Sbjct: 435 GGGGVGTGFWPTPPGFGGG 452

[Close]

BLAST of Carg18781 vs. TAIR 10
Match: AT2G20100.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 122.1 bits (305), Expect = 6.9e-28
Identity = 95/224 (42.41%), Postives = 117/224 (52.23%), Query Frame = 0


Query: 13  SPSFSSFAE-------QPQSWSQLLL-----GEEERVLNQTQMGHH--------YQPKKL 72
           +P+FSS+ E       QP S SQLLL     GEEE++     M HH        YQ K++
Sbjct: 75  NPNFSSWLEMSDLPLDQPWSLSQLLLGGLMMGEEEKM---EMMNHHHHQNQHQSYQAKRI 134

Query: 73  ENWEHQILDHTTTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSNNTNFPDLTHNQPPA 132
           +NWE Q+L H  +                +KQE SN N +   SS N+         PP 
Sbjct: 135 QNWEEQVLRHQAS----------------MKQESSNNNSYGIMSSPNS---------PPN 194

Query: 133 AAAA-------DHLPEVRFSCKSFEQSNHIAPVSGNACKKARIHPPSSSQPPLKVRKEKL 192
            + A       D+   +       E ++     S  A KK ++  P SSQ  LKVRKEKL
Sbjct: 195 KSCATIINTNEDNNNNIHSGLNLSECNSSEMIGSSFANKKPKLQVP-SSQSTLKVRKEKL 254

Query: 193 VDRITALHQIVSPFGKTDTASVLSEAIGYIRFLQGQIEALSYPY 210
             RI +LHQ+VSPFGKTDTASVLSEAIGYIRFL  QIEALS PY
Sbjct: 255 GGRIASLHQLVSPFGKTDTASVLSEAIGYIRFLHSQIEALSLPY 269

[Close]

BLAST of Carg18781 vs. TAIR 10
Match: AT1G31050.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 112.8 bits (281), Expect = 4.2e-25
Identity = 64/151 (42.38%), Postives = 87/151 (57.62%), Query Frame = 0


Query: 119 LPEVRFSCKSFEQSNHIAPVSGNACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSP 178
           L  VR    +  +      +S    KKA+    S+  P  ++ K KL D+IT L QIVSP
Sbjct: 280 LAAVRLGTTNAGKKKRCEEISDEVSKKAKCSEGSTLSPEKELPKAKLRDKITTLQQIVSP 339

Query: 179 FGKTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDAGSGGEEMRREEKAVK--E 238
           FGKTDTASVL EAI YI F Q Q++ LS PY++++   ++D   G +     ++  K  +
Sbjct: 340 FGKTDTASVLQEAITYINFYQEQVKLLSTPYMKNS--SMKDPWGGWDREDHNKRGPKHLD 399

Query: 239 LRSRGLCLVPVSCTQLVGGDNNGAAYWAPAY 268
           LRSRGLCLVP+S T +   DN+   YW P Y
Sbjct: 400 LRSRGLCLVPISYTPIAYRDNSATDYWNPTY 428

The following BLAST results are available for this feature:

BLAST of Carg18781 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7025815.1	6.9e-155	100.00	Transcription factor bHLH68 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6593472.1	1.4e-152	99.26	Transcription factor basic helix-loop-helix 68, partial [Cucurbita argyrosperma ...	[more]
XP_022964017.1	5.9e-146	97.42	transcription factor bHLH68-like [Cucurbita moschata]	[more]
XP_023000383.1	1.3e-145	96.31	transcription factor bHLH68-like [Cucurbita maxima]	[more]
XP_023515291.1	3.6e-143	95.57	transcription factor bHLH68-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg18781 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S3D1	6.9e-41	38.96	Transcription factor bHLH68 OS=Arabidopsis thaliana OX=3702 GN=BHLH68 PE=1 SV=2	[more]
Q7XHI5	5.5e-38	39.17	Transcription factor bHLH133 OS=Arabidopsis thaliana OX=3702 GN=BHLH133 PE=1 SV=...	[more]
Q9SFZ3	1.4e-28	53.24	Transcription factor bHLH110 OS=Arabidopsis thaliana OX=3702 GN=BHLH110 PE=2 SV=...	[more]
Q9FYJ6	5.9e-24	42.38	Transcription factor bHLH111 OS=Arabidopsis thaliana OX=3702 GN=BHLH111 PE=2 SV=...	[more]
Q94JL3	5.9e-24	39.78	Transcription factor bHLH112 OS=Arabidopsis thaliana OX=3702 GN=BHLH112 PE=1 SV=...	[more]

BLAST of Carg18781 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HGP4	2.8e-146	97.42	transcription factor bHLH68-like OS=Cucurbita moschata OX=3662 GN=LOC111464167 P...	[more]
A0A6J1KMG6	6.3e-146	96.31	transcription factor bHLH68-like OS=Cucurbita maxima OX=3661 GN=LOC111494639 PE=...	[more]
A0A6J1CYC1	3.8e-82	59.02	transcription factor bHLH68-like OS=Momordica charantia OX=3673 GN=LOC111015393 ...	[more]
A0A0A0K957	8.2e-77	62.81	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G447040 PE=4 S...	[more]
A0A5D3BYE2	7.6e-67	55.45	Transcription factor bHLH68-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]

BLAST of Carg18781 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29100.1	4.9e-42	38.96	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G20100.1	3.9e-39	39.17	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G27660.1	9.7e-30	53.24	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G20100.2	6.9e-28	42.41	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G31050.1	4.2e-25	42.38	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 159..220 e-value: 4.5E-6 score: 28.7
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 159..211
None	No IPR available	PANTHER	PTHR16223:SF53	BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN	coord: 14..257
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 14..257
None	No IPR available	CDD	cd11393	bHLH_AtbHLH_like	coord: 159..206 e-value: 1.31788E-20 score: 80.6883
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 149..198 score: 10.867585

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18781-RA	Carg18781-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding