Carg18699 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18699
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	box C/D snoRNA protein 1-like
Location	Carg_Chr17: 7398988 .. 7401787 (+)
RNA-Seq Expression	Carg18699
Synteny	Carg18699

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGAAGGAGATGCAACTGTGTCAGCTTCCACAAGCTCCAACCGCGAAGGATCATCACTTTGCGAAGAGTGTAAATCGAACCCATCCAAGTACAAGTGCCCCGCTTGTTCTTTGCGCTCTTGTAGCCTCAACTGCGTCAAGGCTCACAAGAGGCACAGTGGCTGTACTGGCAAGAGGAAGCACATCCAACTCGTCCCGCTTTCTCAGTTTAACGATTCCATCCTTCTTTCTGGTACTTGAACTCCCTCCCTCGACTCATCTCACTGGTTTTGAATGTTTCTAGTACTACTGATTTTGCGTTAGTGGTTCTGGAATTGTTTAGCTTTGTAATTTGATTGGATTCGCCATATCTGTGTTCTTGCGTCTCTAAGAATGGATATCATGGTTGTTTTTACGATATGTAGATTATAATTTGCTGGAGGAAGTGAAAAGAATGGCTGAATCAGCTCAAAGATTCAGAAAGAAATTGTGCCCTTATACTCATGCTTACTTTCGTCTACCATTTCATCTTAAAAGTTTGCGCACTGCTGCTTTAAGCAGGAGAACAAAAATCATGTTTCTCCCTACAGGAATGACGAAAAGGGAAAACAATCAAACTCGATATGACGAGGTTATCTTCTCCTTATTTATCCATGCGTTATCTAGAAAGATGTATCATCAGACGTTGAATGTATTGAGGACGGTTGGAAGAGAGTCACATATTCCCTAATTAAGGGATTGATCATGAATTTATAAGTAAAGAATACATCTCCGTTGGTATGAGGCCTTTTGGGGAAACCAGGGAACCAAAAGCAAAGCTATGAGAGCTTAGGCTCAAAGTGGACAATACCATCATTGCGAAGAGTTGTGATTCCTAGTATAATGATCTAGTTGGTTGATTTTCTTAATCCAAAGTACTCAGTAGCAGAATTTTAGATGTTTTTACTCCAAATGATGATCTTGGTTTGTTATTGTATTTGAACTTTGTAGACCATTGATCACCATGTAAACATTTTGTATATTGACAGTCACTTCACTGTGCTCAACCTTCAAGTTAGTAACTGTAGTTTGTTTTAAGAATGGAAGTAGTCATACTCTGCAGGTTTGATAATAAGAATTCTTCAGGGTTAGGCCAATCAATCAGGCACCTAGTTTGTTATTCTGGGAAGCAATTCTACTTAAAGTTTTTCTCTTTTCTTTTCTGAAATTGTTCCTCGATAAACGAAGTTTCTTTGTTTACAGGGAAAAAACAATCTTCTGGACAATGGAATGGTGGTTTAACTCTACAGATATTGTTTTAGTTGACCATGGGTGAGTATTTTTTTCCCACGCCACTGGAAGGATGATTTATTATTGTTTTATTTTGGTTGTTTCCTCCAAATTCATGGCAAGTGATTGGGTCTGACTAATGAAATGCTTTGAAAATATTTCCTTTTTCTGCAGAGTTAATGAAAACTCGAAGCTTTCTACCATTCTTGAAAACCATCTACAACCAAGTCCGTGGAAAAATCAACTTCAGAAGTTCTGTGAGCAGCTGGATAGCCTCAAATTTTTTTGTCCGTACATACCCCAAGGTTATATTTCAGTTCCTTTGGGTTGTTTCTCAAGTATTTCATATAAGATGTAGTCGATTAGTGGCGTAGCTTGTGAGATCCCACATCGGTTGGAGAGGAGAATGAAACATTCCTTATAAGGGTGGAAACCTCTCCCTAAAAGACGCGTTTTAAAACTGTAAGGCTGATGACGATATGTAATAGGCAAAAACGGATAATATCTGTTAGCGGTGAGCTTGGACTGTTACAAATGGTATCAGAGTCAGACACCGAACGGTGTGCCAAGGAGGACACTAGGTCTCCAAGGGGGGTGGATTGTGAGATCCCACATCAGTTGGAGAGGAAAATGAATCATTCCTTACAAAAGTGTGGAAACCTCTCCCTAAAACAAACGTTTTAAAGCCGTGAGGCTGAGAGCAATACGTAATGGGCCAAAGCAGAAAATATTTGTTAGCGGTAACCGGTGCACTTCTGTCGTACAACCAGCTTGTCATTTGTCTGTCATTATTTTGTAACTACAAGGTAGAGGTCCTTGTAGTCTCTTTTTTTGATATAAAAGAAAGGTAATGTAAACCACTCTAGGATTAGTGTCATGTTTGACATGGAATTAGAACGATTTTGTCAATTCACTTAATAAATCATTCCTTAAAGACAGATTGTATAGTAGCTATTTGCTTGAAAGAATTAGGTATCCAAGGGCTTCCTTTAACTTGCCTTGTTTATTATGTATAATATGTATATAGGGAGCTACATCGCCTTTCCGTGAGCTGGACTCGAGATTGCCAATTAGACAACTATTTTACAACTTGGTTTTTGTGGAATACCCTGTTATATATGTTGTTCTACCCTCTCAAACTCCCAACTTCCAAGTAGTGAAAACGGCCAATCCAATGAGTCATAATCCAGAAGATACCAATACTGGAAAAAATGATCTTGCTAGTCATGAAGGTGTTTCCTTCAGGGTGGAAGAAATAGAAGATGATGACAACTCCTGTAATCCTCAGGTTCTTGATCTGTTGAAAGTATCAACTTCAAGCCCACATGGTGCAACACTGGGGAACCATGAGTTTGGGAATGGCCCGAATTCAAGCTCCCAGGCCGAGGAGCTAGCGGTTTCGAAAGGATTGGAGTTTGATTTTGAGCAAGATCTGATAGATACATACTCAAATATCATGGCACAAATCAATCCAGATGATTTTCTTGATTGGGAAGGAGACTTTTCCAAGGGAGTTGAAGAACTGGAGGAAGGAGAGATTATGGAATAG

mRNA sequence

ATGGCCGAAGGAGATGCAACTGTGTCAGCTTCCACAAGCTCCAACCGCGAAGGATCATCACTTTGCGAAGAGTGTAAATCGAACCCATCCAAGTACAAGTGCCCCGCTTGTTCTTTGCGCTCTTGTAGCCTCAACTGCGTCAAGGCTCACAAGAGGCACAGTGGCTGTACTGGCAAGAGGAAGCACATCCAACTCGTCCCGCTTTCTCAGTTTAACGATTCCATCCTTCTTTCTGATTATAATTTGCTGGAGGAAGTGAAAAGAATGGCTGAATCAGCTCAAAGATTCAGAAAGAAATTGTGCCCTTATACTCATGCTTACTTTCGTCTACCATTTCATCTTAAAAGTTTGCGCACTGCTGCTTTAAGCAGGAGAACAAAAATCATGTTTCTCCCTACAGGAATGACGAAAAGGGAAAACAATCAAACTCGATATGACGAGACCATTGATCACCATGTAAACATTTTGTATATTGACAGTCACTTCACTGTGCTCAACCTTCAAGGAGCTACATCGCCTTTCCGTGAGCTGGACTCGAGATTGCCAATTAGACAACTATTTTACAACTTGGTTTTTGTGGAATACCCTGTTATATATGTTGTTCTACCCTCTCAAACTCCCAACTTCCAAGTAGTGAAAACGGCCAATCCAATGAGTCATAATCCAGAAGATACCAATACTGGAAAAAATGATCTTGCTAGTCATGAAGGTGTTTCCTTCAGGGTGGAAGAAATAGAAGATGATGACAACTCCTGTAATCCTCAGGTTCTTGATCTGTTGAAAGTATCAACTTCAAGCCCACATGGTGCAACACTGGGGAACCATGAGTTTGGGAATGGCCCGAATTCAAGCTCCCAGGCCGAGGAGCTAGCGGTTTCGAAAGGATTGGAGTTTGATTTTGAGCAAGATCTGATAGATACATACTCAAATATCATGGCACAAATCAATCCAGATGATTTTCTTGATTGGGAAGGAGACTTTTCCAAGGGAGTTGAAGAACTGGAGGAAGGAGAGATTATGGAATAG

Coding sequence (CDS)

ATGGCCGAAGGAGATGCAACTGTGTCAGCTTCCACAAGCTCCAACCGCGAAGGATCATCACTTTGCGAAGAGTGTAAATCGAACCCATCCAAGTACAAGTGCCCCGCTTGTTCTTTGCGCTCTTGTAGCCTCAACTGCGTCAAGGCTCACAAGAGGCACAGTGGCTGTACTGGCAAGAGGAAGCACATCCAACTCGTCCCGCTTTCTCAGTTTAACGATTCCATCCTTCTTTCTGATTATAATTTGCTGGAGGAAGTGAAAAGAATGGCTGAATCAGCTCAAAGATTCAGAAAGAAATTGTGCCCTTATACTCATGCTTACTTTCGTCTACCATTTCATCTTAAAAGTTTGCGCACTGCTGCTTTAAGCAGGAGAACAAAAATCATGTTTCTCCCTACAGGAATGACGAAAAGGGAAAACAATCAAACTCGATATGACGAGACCATTGATCACCATGTAAACATTTTGTATATTGACAGTCACTTCACTGTGCTCAACCTTCAAGGAGCTACATCGCCTTTCCGTGAGCTGGACTCGAGATTGCCAATTAGACAACTATTTTACAACTTGGTTTTTGTGGAATACCCTGTTATATATGTTGTTCTACCCTCTCAAACTCCCAACTTCCAAGTAGTGAAAACGGCCAATCCAATGAGTCATAATCCAGAAGATACCAATACTGGAAAAAATGATCTTGCTAGTCATGAAGGTGTTTCCTTCAGGGTGGAAGAAATAGAAGATGATGACAACTCCTGTAATCCTCAGGTTCTTGATCTGTTGAAAGTATCAACTTCAAGCCCACATGGTGCAACACTGGGGAACCATGAGTTTGGGAATGGCCCGAATTCAAGCTCCCAGGCCGAGGAGCTAGCGGTTTCGAAAGGATTGGAGTTTGATTTTGAGCAAGATCTGATAGATACATACTCAAATATCATGGCACAAATCAATCCAGATGATTTTCTTGATTGGGAAGGAGACTTTTCCAAGGGAGTTGAAGAACTGGAGGAAGGAGAGATTATGGAATAG

Protein sequence

MAEGDATVSASTSSNREGSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAYFRLPFHLKSLRTAALSRRTKIMFLPTGMTKRENNQTRYDETIDHHVNILYIDSHFTVLNLQGATSPFRELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDDNSCNPQVLDLLKVSTSSPHGATLGNHEFGNGPNSSSQAEELAVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWEGDFSKGVEELEEGEIME

Homology

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BLAST of Carg18699 vs. NCBI nr
Match: KAG7014219.1 (Box C/D snoRNA protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 679.9 bits (1753), Expect = 1.2e-191
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0


Query: 1   MAEGDATVSASTSSNREGSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKR 60
           MAEGDATVSASTSSNREGSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKR
Sbjct: 1   MAEGDATVSASTSSNREGSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKR 60

Query: 61  KHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAYFRLPFHLKSLRTA 120
           KHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAYFRLPFHLKSLRTA
Sbjct: 61  KHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAYFRLPFHLKSLRTA 120

Query: 121 ALSRRTKIMFLPTGMTKRENNQTRYDETIDHHVNILYIDSHFTVLNLQGATSPFRELDSR 180
           ALSRRTKIMFLPTGMTKRENNQTRYDETIDHHVNILYIDSHFTVLNLQGATSPFRELDSR
Sbjct: 121 ALSRRTKIMFLPTGMTKRENNQTRYDETIDHHVNILYIDSHFTVLNLQGATSPFRELDSR 180

Query: 181 LPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSF 240
           LPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSF
Sbjct: 181 LPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSF 240

Query: 241 RVEEIEDDDNSCNPQVLDLLKVSTSSPHGATLGNHEFGNGPNSSSQAEELAVSKGLEFDF 300
           RVEEIEDDDNSCNPQVLDLLKVSTSSPHGATLGNHEFGNGPNSSSQAEELAVSKGLEFDF
Sbjct: 241 RVEEIEDDDNSCNPQVLDLLKVSTSSPHGATLGNHEFGNGPNSSSQAEELAVSKGLEFDF 300

Query: 301 EQDLIDTYSNIMAQINPDDFLDWEGDFSKGVEELEEGEIME 342
           EQDLIDTYSNIMAQINPDDFLDWEGDFSKGVEELEEGEIME
Sbjct: 301 EQDLIDTYSNIMAQINPDDFLDWEGDFSKGVEELEEGEIME 341

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BLAST of Carg18699 vs. NCBI nr
Match: XP_023548330.1 (box C/D snoRNA protein 1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 570.9 bits (1470), Expect = 7.6e-159
Identity = 302/377 (80.11%), Postives = 316/377 (83.82%), Query Frame = 0


Query: 1   MAEGDATVSASTSSNRE-GSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGK 60
           MAEGDAT+SASTSSNRE GSSLCEECKS PSKYKCPACSLRSCSLNCV AHKRHSGCTGK
Sbjct: 1   MAEGDATLSASTSSNREGGSSLCEECKSKPSKYKCPACSLRSCSLNCVNAHKRHSGCTGK 60

Query: 61  RKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAYFRLPFHLKSLRT 120
           RKHIQLV LSQFNDSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAYFR PFHLKSLRT
Sbjct: 61  RKHIQLVSLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAYFRFPFHLKSLRT 120

Query: 121 AALSRRTKIMFLPTGMTKRENNQTRYDETIDHHVNI-LYIDSH----------------- 180
           AA SRRTKIMFLPTGMTKRENNQTRYD+ ++ +  +   +++H                 
Sbjct: 121 AASSRRTKIMFLPTGMTKRENNQTRYDKRVNENSKLSTILENHLQPSPWKNQLQNFCEQL 180

Query: 181 -----FTVLNLQGATSPFRELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVVKTAN 240
                F     +GATSPF ELDSRLPIR+LFYNLVFVEYPVIYVVLPSQTPNFQVVKTA 
Sbjct: 181 DSLKFFVRAYPKGATSPFHELDSRLPIRELFYNLVFVEYPVIYVVLPSQTPNFQVVKTAK 240

Query: 241 PMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDDNSCNPQVLDLLKVSTSSPHGAT----- 300
           P SHNPEDTNT KNDLASHEGVSFRVEEIEDDDNSCNP+VLDLLKVSTSSP         
Sbjct: 241 PTSHNPEDTNTEKNDLASHEGVSFRVEEIEDDDNSCNPRVLDLLKVSTSSPRREVDSQNL 300

Query: 301 -------LGNHEFGNGPNSSSQAEELAVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWE 342
                  +G HEFGNGPNSSSQAEE+AVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWE
Sbjct: 301 HNYFTDLMGKHEFGNGPNSSSQAEEIAVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWE 360

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BLAST of Carg18699 vs. NCBI nr
Match: XP_023548329.1 (box C/D snoRNA protein 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 564.7 bits (1454), Expect = 5.4e-157
Identity = 306/400 (76.50%), Postives = 317/400 (79.25%), Query Frame = 0


Query: 1   MAEGDATVSASTSSNRE-GSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGK 60
           MAEGDAT+SASTSSNRE GSSLCEECKS PSKYKCPACSLRSCSLNCV AHKRHSGCTGK
Sbjct: 1   MAEGDATLSASTSSNREGGSSLCEECKSKPSKYKCPACSLRSCSLNCVNAHKRHSGCTGK 60

Query: 61  RKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAYFRLPFHLKSLRT 120
           RKHIQLV LSQFNDSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAYFR PFHLKSLRT
Sbjct: 61  RKHIQLVSLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAYFRFPFHLKSLRT 120

Query: 121 AALSRRTKIMFLPTGMTKRENNQTRYDE-------------------TIDHHVN-----I 180
           AA SRRTKIMFLPTGMTKRENNQTRYD+                    +DH VN      
Sbjct: 121 AASSRRTKIMFLPTGMTKRENNQTRYDKREKTIFWTMEWRFNSTDIVLVDHGVNENSKLS 180

Query: 181 LYIDSH----------------------FTVLNLQGATSPFRELDSRLPIRQLFYNLVFV 240
             +++H                      F     +GATSPF ELDSRLPIR+LFYNLVFV
Sbjct: 181 TILENHLQPSPWKNQLQNFCEQLDSLKFFVRAYPKGATSPFHELDSRLPIRELFYNLVFV 240

Query: 241 EYPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDDNSCN 300
           EYPVIYVVLPSQTPNFQVVKTA P SHNPEDTNT KNDLASHEGVSFRVEEIEDDDNSCN
Sbjct: 241 EYPVIYVVLPSQTPNFQVVKTAKPTSHNPEDTNTEKNDLASHEGVSFRVEEIEDDDNSCN 300

Query: 301 PQVLDLLKVSTSSPHGAT------------LGNHEFGNGPNSSSQAEELAVSKGLEFDFE 342
           P+VLDLLKVSTSSP                +G HEFGNGPNSSSQAEE+AVSKGLEFDFE
Sbjct: 301 PRVLDLLKVSTSSPRREVDSQNLHNYFTDLMGKHEFGNGPNSSSQAEEIAVSKGLEFDFE 360

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BLAST of Carg18699 vs. NCBI nr
Match: XP_038900096.1 (box C/D snoRNA protein 1-like [Benincasa hispida] >XP_038900097.1 box C/D snoRNA protein 1-like [Benincasa hispida] >XP_038900098.1 box C/D snoRNA protein 1-like [Benincasa hispida] >XP_038900100.1 box C/D snoRNA protein 1-like [Benincasa hispida])

HSP 1 Score: 518.8 bits (1335), Expect = 3.4e-143
Identity = 290/418 (69.38%), Postives = 306/418 (73.21%), Query Frame = 0


Query: 1   MAEGDATVSASTSSNREGSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKR 60
           MAEGDAT +ASTSSNR+ SSLC+ECKSNPSKYKCPACS+RSCSLNCV AHKR SGCTGKR
Sbjct: 1   MAEGDATATASTSSNRQESSLCQECKSNPSKYKCPACSIRSCSLNCVNAHKRRSGCTGKR 60

Query: 61  KHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAYFRLPFHLKSLRTA 120
           K  Q VPLSQFNDSILLSDYNLLEEVKRMAESAQR RKKLCPYTHAYFRLPFHLKSLRTA
Sbjct: 61  KQTQFVPLSQFNDSILLSDYNLLEEVKRMAESAQRHRKKLCPYTHAYFRLPFHLKSLRTA 120

Query: 121 ALSRRTKIMFLPTGMTKRENNQTRYDE-------------------TIDHHVN-----IL 180
           A SRRTKIMFLPTGMTKRENNQTRYD+                    +DH VN       
Sbjct: 121 ASSRRTKIMFLPTGMTKRENNQTRYDKREKTIFWTMEWRFNSADIVLVDHGVNENSKLST 180

Query: 181 YIDSH----------------------FTVLNLQGATSPFRELDSRLPIRQLFYNLVFVE 240
            +++H                      F     +GATSPFRELDSRLPIRQLF NLVFVE
Sbjct: 181 ILENHLQPSPWKNQLEKFCEQLDSLKFFVRTYPKGATSPFRELDSRLPIRQLFSNLVFVE 240

Query: 241 YPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDDNSCNP 300
           YPVIYV LPSQTPNF+VVKTANPMS NPE TN GKN+LASHEGVSFRVEEIEDDDNS NP
Sbjct: 241 YPVIYVFLPSQTPNFEVVKTANPMSRNPEGTNAGKNNLASHEGVSFRVEEIEDDDNSWNP 300

Query: 301 QVLDLLKVSTSSP---------HGAT-------LGNHEFGNGPNSSSQAEELAVSKGLEF 342
           QVLDL++VST SP         H AT       +G  EFGN PNSSSQA+EL V K  EF
Sbjct: 301 QVLDLMQVSTLSPRCEVDPQNLHNATHTYSIDLMGKQEFGNSPNSSSQAKELGVVKEFEF 360

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BLAST of Carg18699 vs. NCBI nr
Match: XP_031745217.1 (box C/D snoRNA protein 1 [Cucumis sativus] >KGN45163.1 hypothetical protein Csa_015580 [Cucumis sativus])

HSP 1 Score: 492.7 bits (1267), Expect = 2.6e-135
Identity = 279/418 (66.75%), Postives = 297/418 (71.05%), Query Frame = 0


Query: 1   MAEGDATVSASTSSNREGSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKR 60
           MAE DATV+ STSSN++GSSLCEECKSNPSKYKCPACS+RSCSLNCV AHKR SGCTGKR
Sbjct: 1   MAEVDATVAVSTSSNQQGSSLCEECKSNPSKYKCPACSIRSCSLNCVNAHKRRSGCTGKR 60

Query: 61  KHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAYFRLPFHLKSLRTA 120
           K  Q VPLSQFNDSILLSDYNLLEEVKRMAESAQR RKKLCPYTHAYFRLPFHLKSLR A
Sbjct: 61  KQTQFVPLSQFNDSILLSDYNLLEEVKRMAESAQRLRKKLCPYTHAYFRLPFHLKSLRAA 120

Query: 121 ALSRRTKIMFLPTGMTKRENNQTRYDE-------------------TIDHHVN-----IL 180
           A +RRTKIMFLPTGMTKRENNQTRYD+                    +DH VN       
Sbjct: 121 ASNRRTKIMFLPTGMTKRENNQTRYDKREKTIFWTMEWRFNSTDIVLVDHEVNENSKLST 180

Query: 181 YIDSH----------------------FTVLNLQGATSPFRELDSRLPIRQLFYNLVFVE 240
            +++H                      F     +GATS F ELDS LPIRQLF NL FVE
Sbjct: 181 ILENHLRPCPWKTQLQKFYEQLDCLKFFVRTYPKGATSSFCELDSTLPIRQLFSNLAFVE 240

Query: 241 YPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDDNSCNP 300
           YPVIYVVLPSQTPNF+VVKTANP+S N E  N  KNDLASHEGV FRVEEIE+D+NSCNP
Sbjct: 241 YPVIYVVLPSQTPNFEVVKTANPVSRNLEGPNALKNDLASHEGVCFRVEEIEEDENSCNP 300

Query: 301 QVLDLLKVSTSSP---------HGAT-------LGNHEFGNGPNSSSQAEELAVSKGLEF 342
           QVLDL+KVSTSSP         HGAT       +G  E GN P SSSQA E  V K LEF
Sbjct: 301 QVLDLMKVSTSSPHCKVSPRNLHGATHSYSTGLVGKQEVGNSPKSSSQAREPGVVKELEF 360

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BLAST of Carg18699 vs. ExPASy Swiss-Prot
Match: Q5RF97 (Box C/D snoRNA protein 1 OS=Pongo abelii OX=9601 GN=ZNHIT6 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.3e-15
Identity = 49/130 (37.69%), Postives = 65/130 (50.00%), Query Frame = 0


Query: 20  SLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSD 79
           S CE C +  +KY+CP C   SCSL CVK HK    C G R     + + QF +  LLSD
Sbjct: 213 SRCETCGTEEAKYRCPRCMRYSCSLPCVKKHKAELTCNGVRDKTAYISIQQFTEMNLLSD 272

Query: 80  YNLLEEVKRMAESAQR--FRKKLCPYTHAYFRLPFHLKSLRTAALSRRTKIMFLPTGMTK 139
           Y  LE+V R A+   R  F K+     H YF        ++  A  +   +  LP G TK
Sbjct: 273 YRFLEDVARTADHISRDAFLKRPISNKHMYF--------MKNRARRQGINLKLLPNGFTK 332

Query: 140 RENNQTRYDE 148
           R+ N T +D+
Sbjct: 333 RKENSTFFDK 334

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BLAST of Carg18699 vs. ExPASy Swiss-Prot
Match: Q9NWK9 (Box C/D snoRNA protein 1 OS=Homo sapiens OX=9606 GN=ZNHIT6 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 6.3e-15
Identity = 48/130 (36.92%), Postives = 65/130 (50.00%), Query Frame = 0


Query: 20  SLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSD 79
           S CE C +  +KY+CP C   SCSL CVK HK    C G R     + + QF +  LLSD
Sbjct: 218 SRCETCGTEEAKYRCPRCMRYSCSLPCVKKHKAELTCNGVRDKTAYISIQQFTEMNLLSD 277

Query: 80  YNLLEEVKRMAESAQR--FRKKLCPYTHAYFRLPFHLKSLRTAALSRRTKIMFLPTGMTK 139
           Y  LE+V R A+   R  F K+     + YF        ++  A  +   +  LP G TK
Sbjct: 278 YRFLEDVARTADHISRDAFLKRPISNKYMYF--------MKNRARRQGINLKLLPNGFTK 337

Query: 140 RENNQTRYDE 148
           R+ N T +D+
Sbjct: 338 RKENSTFFDK 339

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BLAST of Carg18699 vs. ExPASy Swiss-Prot
Match: Q3UFB2 (Box C/D snoRNA protein 1 OS=Mus musculus OX=10090 GN=Znhit6 PE=1 SV=2)

HSP 1 Score: 78.6 bits (192), Expect = 1.6e-13
Identity = 49/136 (36.03%), Postives = 67/136 (49.26%), Query Frame = 0


Query: 13  SSNREGSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFN 72
           S  +   S CE C +  +KY+CP C   SCSL CVK HK    C+G R     V L QF 
Sbjct: 202 SKRKLALSRCETCGTEEAKYRCPRCMRFSCSLPCVKKHKADLTCSGVRDKTAYVSLQQFT 261

Query: 73  DSILLSDYNLLEEVKRMAESAQR--FRKKLCPYTHAYFRLPFHLKSLRTAALSRRTKIMF 132
           +  LLSDY  LE+V R A+   R  F K+     + +F        ++  A  +   +  
Sbjct: 262 EMNLLSDYRFLEDVARTADKVSRDTFLKRPKRKKYLFF--------MKNRARKQGIYLRL 321

Query: 133 LPTGMTKRENNQTRYD 147
           LP G +KR+ N T +D
Sbjct: 322 LPNGFSKRKENSTVFD 329

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BLAST of Carg18699 vs. ExPASy Swiss-Prot
Match: O74906 (Putative box C/D snoRNA protein SPCC613.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC613.07 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 3.0e-09
Identity = 48/136 (35.29%), Postives = 68/136 (50.00%), Query Frame = 0


Query: 13  SSNREGSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFN 72
           S NR G  +C  C+ N SKY+CP C  R C L C   HKR + C+G+R     VP S+  
Sbjct: 2   SENRLG--ICSTCQKNASKYRCPRCDSRFCCLECNLEHKRLTKCSGERDPATFVPKSKLV 61

Query: 73  DSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAYFRLPFHLK-SLRTAALSRRTKIMFL 132
           +  L SD+N L  V+R+    +    ++   ++   R    LK SL  A ++    I F 
Sbjct: 62  NH-LNSDFNFLSGVERLINRKENGSHQV---SNRAERNRLQLKRSLERAGIN----IKFA 121

Query: 133 PTGMTKRENNQTRYDE 148
           P    KR  N+T YD+
Sbjct: 122 PPSNKKRRLNRTHYDK 127

[Close]

BLAST of Carg18699 vs. ExPASy Swiss-Prot
Match: P38772 (Box C/D snoRNA protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=BCD1 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 4.8e-07
Identity = 42/154 (27.27%), Postives = 74/154 (48.05%), Query Frame = 0


Query: 21  LCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGK----RKHIQLVPLSQFND--- 80
           LC  C     KYKCP C +++CSL C K HK    C+G+    +++I    L Q +D   
Sbjct: 4   LCGVCGIKEFKYKCPRCLVQTCSLECSKKHKTRDNCSGQTHDPKEYISSEALKQADDDKH 63

Query: 81  ---SILLSDYNLLEEVKRMA-----ESAQRFRKKLCP---YTHAYFRLPFHL-----KSL 140
              + +  DYN L ++KRM      ++  + ++ L P   +   + +  + +      S 
Sbjct: 64  ERNAYVQRDYNYLTQLKRMVHVQKMDARMKNKRVLGPVGGHNSNFKKRRYDIDEDDRDST 123

Query: 141 RTAALSRR-TKIMFLPTGMTKRENNQTRYDETID 151
               + RR    + LP GM +   N++++D+T+D
Sbjct: 124 ECQRIIRRGVNCLMLPKGMQRSSQNRSKWDKTMD 157

[Close]

BLAST of Carg18699 vs. ExPASy TrEMBL
Match: A0A0A0K6N1 (HIT-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G429490 PE=4 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 1.3e-135
Identity = 279/418 (66.75%), Postives = 297/418 (71.05%), Query Frame = 0


Query: 1   MAEGDATVSASTSSNREGSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKR 60
           MAE DATV+ STSSN++GSSLCEECKSNPSKYKCPACS+RSCSLNCV AHKR SGCTGKR
Sbjct: 1   MAEVDATVAVSTSSNQQGSSLCEECKSNPSKYKCPACSIRSCSLNCVNAHKRRSGCTGKR 60

Query: 61  KHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAYFRLPFHLKSLRTA 120
           K  Q VPLSQFNDSILLSDYNLLEEVKRMAESAQR RKKLCPYTHAYFRLPFHLKSLR A
Sbjct: 61  KQTQFVPLSQFNDSILLSDYNLLEEVKRMAESAQRLRKKLCPYTHAYFRLPFHLKSLRAA 120

Query: 121 ALSRRTKIMFLPTGMTKRENNQTRYDE-------------------TIDHHVN-----IL 180
           A +RRTKIMFLPTGMTKRENNQTRYD+                    +DH VN       
Sbjct: 121 ASNRRTKIMFLPTGMTKRENNQTRYDKREKTIFWTMEWRFNSTDIVLVDHEVNENSKLST 180

Query: 181 YIDSH----------------------FTVLNLQGATSPFRELDSRLPIRQLFYNLVFVE 240
            +++H                      F     +GATS F ELDS LPIRQLF NL FVE
Sbjct: 181 ILENHLRPCPWKTQLQKFYEQLDCLKFFVRTYPKGATSSFCELDSTLPIRQLFSNLAFVE 240

Query: 241 YPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDDNSCNP 300
           YPVIYVVLPSQTPNF+VVKTANP+S N E  N  KNDLASHEGV FRVEEIE+D+NSCNP
Sbjct: 241 YPVIYVVLPSQTPNFEVVKTANPVSRNLEGPNALKNDLASHEGVCFRVEEIEEDENSCNP 300

Query: 301 QVLDLLKVSTSSP---------HGAT-------LGNHEFGNGPNSSSQAEELAVSKGLEF 342
           QVLDL+KVSTSSP         HGAT       +G  E GN P SSSQA E  V K LEF
Sbjct: 301 QVLDLMKVSTSSPHCKVSPRNLHGATHSYSTGLVGKQEVGNSPKSSSQAREPGVVKELEF 360

[Close]

BLAST of Carg18699 vs. ExPASy TrEMBL
Match: A0A6J1H4S8 (box C/D snoRNA protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460580 PE=4 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 1.7e-135
Identity = 277/423 (65.48%), Postives = 299/423 (70.69%), Query Frame = 0


Query: 1   MAEGD-----ATVSASTSSNREGSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSG 60
           MAEGD     A  +ASTS NREGSSLC+EC SNPSKYKCPACSLRSCSL+CV  HKR SG
Sbjct: 1   MAEGDTVVAAAAAAASTSFNREGSSLCDECNSNPSKYKCPACSLRSCSLDCVNGHKRRSG 60

Query: 61  CTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAYFRLPFHLK 120
           CTGKRK  Q VP+SQFNDS+LLSDYNLLEEVKRMAESAQR RKKLCPYTH Y+RLPFHLK
Sbjct: 61  CTGKRKQTQFVPISQFNDSVLLSDYNLLEEVKRMAESAQRLRKKLCPYTHPYYRLPFHLK 120

Query: 121 SLRTAALSRRTKIMFLPTGMTKRENNQTRYDE-------------------TIDHHVN-- 180
           SLRTAA SRRTKIMFLPTGMTKRE NQTRYD+                    +DH VN  
Sbjct: 121 SLRTAASSRRTKIMFLPTGMTKREKNQTRYDKREKTIFWTIEWRLNSTDVVLVDHGVNEN 180

Query: 181 ---ILYIDSH----------------------FTVLNLQGATSPFRELDSRLPIRQLFYN 240
                 +++H                      F     +GA +PFRELDS++PIRQLF N
Sbjct: 181 TNLSTVLENHLQPSPWKNQIQKFCEQLDSLKFFVRTYPKGAMAPFRELDSKMPIRQLFSN 240

Query: 241 LVFVEYPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDD 300
           LVFVEYPVIYV LPSQTPNF+VVKTANP+SHNPE  NTGKNDLAS EGV FRVEEIEDDD
Sbjct: 241 LVFVEYPVIYVFLPSQTPNFEVVKTANPVSHNPEGKNTGKNDLASPEGVRFRVEEIEDDD 300

Query: 301 NSCNPQVLDLLKVSTSSPH---------GAT-------LGNHEFGNGPNSSSQAEELAVS 342
           NS N QVLDL+K S SSPH         GAT       +G HE GN PNSSSQA+EL V 
Sbjct: 301 NSFNTQVLDLMKASNSSPHCEVEPQNVLGATHNYSTDLMGKHEVGNSPNSSSQAKELGVH 360

[Close]

BLAST of Carg18699 vs. ExPASy TrEMBL
Match: A0A1S3CEQ2 (box C/D snoRNA protein 1-like OS=Cucumis melo OX=3656 GN=LOC103499892 PE=4 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 2.2e-135
Identity = 275/407 (67.57%), Postives = 291/407 (71.50%), Query Frame = 0


Query: 1   MAEGDATVSASTSSNREGSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKR 60
           MAE DAT++ STSSN +GSSLCEECKSNPSKYKCPACS+RSCSLNCV AHKR SGCTGKR
Sbjct: 1   MAEEDATMAVSTSSNHQGSSLCEECKSNPSKYKCPACSIRSCSLNCVNAHKRRSGCTGKR 60

Query: 61  KHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAYFRLPFHLKSLRTA 120
           K  Q VPLSQFNDSILLSDYNLLEEVKRMAESAQR RKKLCPYTHAYFRLPFHLKSLR A
Sbjct: 61  KQTQFVPLSQFNDSILLSDYNLLEEVKRMAESAQRLRKKLCPYTHAYFRLPFHLKSLRAA 120

Query: 121 ALSRRTKIMFLPTGMTKRENNQTRYDE-------------------TIDHHVN-----IL 180
           A +RRTKIMFLPTGMTKRENNQTRYD+                    +DH VN       
Sbjct: 121 ASNRRTKIMFLPTGMTKRENNQTRYDKREKTIFWTMEWRFNSTNIVLVDHEVNENSKLST 180

Query: 181 YIDSH----------------------FTVLNLQGATSPFRELDSRLPIRQLFYNLVFVE 240
            + +H                      F     +GA SPF ELDS LPIRQLF NL FVE
Sbjct: 181 ILANHLRPSPWKTQLQKFREQLDCLKVFVRTYPKGAKSPFHELDSTLPIRQLFSNLAFVE 240

Query: 241 YPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDDNSCNP 300
           YPVIYVVLP QTPNF+VVKTANP S N E +N  +NDLASH GV FRVEEIEDD+NSCNP
Sbjct: 241 YPVIYVVLPFQTPNFEVVKTANPASRNLEGSNALENDLASHVGVCFRVEEIEDDENSCNP 300

Query: 301 QVLDLLKVSTSSPHGAT-----LGNHEFGNGPNSSSQAEELAVSKGLEFDFEQDLIDTYS 342
           QVLDL+KVSTSSPH        +G  E GN P SSSQA EL V K LEFDFEQDLID YS
Sbjct: 301 QVLDLMKVSTSSPHCKVSPRNLVGKQEVGNSPKSSSQARELGVVKELEFDFEQDLIDAYS 360

[Close]

BLAST of Carg18699 vs. ExPASy TrEMBL
Match: A0A6J1KUW8 (box C/D snoRNA protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111497820 PE=4 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 7.0e-134
Identity = 275/423 (65.01%), Postives = 297/423 (70.21%), Query Frame = 0


Query: 1   MAEGD-----ATVSASTSSNREGSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSG 60
           MAEGD     A  +ASTS NREGSSLCEEC SNPSKYKCPACSLRSCSL+CV  HKR SG
Sbjct: 1   MAEGDTVVTAAAAAASTSFNREGSSLCEECNSNPSKYKCPACSLRSCSLDCVNGHKRRSG 60

Query: 61  CTGKRKHIQLVPLSQFNDSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAYFRLPFHLK 120
           CTGKRK  Q VP+SQFNDS+LLSDYNLLEEVKRMAESAQR RKKLCPYTH Y+RLPFHLK
Sbjct: 61  CTGKRKQTQFVPISQFNDSVLLSDYNLLEEVKRMAESAQRLRKKLCPYTHPYYRLPFHLK 120

Query: 121 SLRTAALSRRTKIMFLPTGMTKRENNQTRYDE-------------------TIDHHVN-- 180
           SLRTAA SRRTKIMFLPTGMTKRE NQTRYD+                    +DH VN  
Sbjct: 121 SLRTAASSRRTKIMFLPTGMTKREKNQTRYDKREKTIFWTIEWRLNSTDVVLVDHGVNEN 180

Query: 181 ---ILYIDSH----------------------FTVLNLQGATSPFRELDSRLPIRQLFYN 240
                 +++H                      F     +GA  PFRELDS++PIRQLF N
Sbjct: 181 TNLSTVLENHLQPSPWKNQIQKFCEQLDSLKFFVRTYPKGAMVPFRELDSKMPIRQLFSN 240

Query: 241 LVFVEYPVIYVVLPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDD 300
           LVFVEYPVIYV LPSQTPNF+V+KTANP+SHNPE  NTGKNDL S EGV FRVEEIEDDD
Sbjct: 241 LVFVEYPVIYVFLPSQTPNFEVLKTANPVSHNPEGKNTGKNDLGSPEGVRFRVEEIEDDD 300

Query: 301 NSCNPQVLDLLKVSTSSPH---------GAT-------LGNHEFGNGPNSSSQAEELAVS 342
           NS N QVLDL+K S SSP+         GAT       +G HE GN PNSSSQA+EL V 
Sbjct: 301 NSFNTQVLDLMKASNSSPYCEVEPQNVLGATHNYSTDLMGKHEVGNSPNSSSQAKELGVL 360

[Close]

BLAST of Carg18699 vs. ExPASy TrEMBL
Match: A0A5D3CJA8 (Box C/D snoRNA protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001150 PE=4 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.7e-132
Identity = 269/400 (67.25%), Postives = 285/400 (71.25%), Query Frame = 0


Query: 8   VSASTSSNREGSSLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVP 67
           ++ STSSN +GSSLCEECKSNPSKYKCPACS+RSCSLNCV AHKR SGCTGKRK  Q VP
Sbjct: 1   MAVSTSSNHQGSSLCEECKSNPSKYKCPACSIRSCSLNCVNAHKRRSGCTGKRKQTQFVP 60

Query: 68  LSQFNDSILLSDYNLLEEVKRMAESAQRFRKKLCPYTHAYFRLPFHLKSLRTAALSRRTK 127
           LSQFNDSILLSDYNLLEEVKRMAESAQR RKKLCPYTHAYFRLPFHLKSLR AA +RRTK
Sbjct: 61  LSQFNDSILLSDYNLLEEVKRMAESAQRLRKKLCPYTHAYFRLPFHLKSLRAAASNRRTK 120

Query: 128 IMFLPTGMTKRENNQTRYDE-------------------TIDHHVN-----ILYIDSH-- 187
           IMFLPTGMTKRENNQTRYD+                    +DH VN        + +H  
Sbjct: 121 IMFLPTGMTKRENNQTRYDKREKTIFWTMEWRFNSTNIVLVDHEVNENSKLSTILANHLR 180

Query: 188 --------------------FTVLNLQGATSPFRELDSRLPIRQLFYNLVFVEYPVIYVV 247
                               F     +GA SPF ELDS LPIRQLF NL FVEYPVIYVV
Sbjct: 181 PSPWKTQLQKFREQLDCLKVFVRTYPKGAKSPFHELDSTLPIRQLFSNLAFVEYPVIYVV 240

Query: 248 LPSQTPNFQVVKTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDDNSCNPQVLDLLK 307
           LP QTPNF+VVKTANP S N E +N  +NDLASH GV FRVEEIEDD+NSCNPQVLDL+K
Sbjct: 241 LPFQTPNFEVVKTANPASRNLEGSNALENDLASHVGVCFRVEEIEDDENSCNPQVLDLMK 300

Query: 308 VSTSSPHGAT-----LGNHEFGNGPNSSSQAEELAVSKGLEFDFEQDLIDTYSNIMAQIN 342
           VSTSSPH        +G  E GN P SSSQA EL V K LEFDFEQDLID YSNIMAQIN
Sbjct: 301 VSTSSPHCKVSPRNLVGKQEVGNSPKSSSQARELGVVKELEFDFEQDLIDAYSNIMAQIN 360

[Close]

BLAST of Carg18699 vs. TAIR 10
Match: AT1G04945.2 (HIT-type Zinc finger family protein )

HSP 1 Score: 258.1 bits (658), Expect = 1.0e-68
Identity = 163/393 (41.48%), Postives = 235/393 (59.80%), Query Frame = 0


Query: 20  SLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSD 79
           S+CEECK NP KYKCP CS+RSC+L CVKAHK+ +GCTGKRK   +VPLS+F+D++LLSD
Sbjct: 4   SVCEECKQNPWKYKCPGCSIRSCALPCVKAHKQRTGCTGKRKFTDVVPLSKFDDNLLLSD 63

Query: 80  YNLLEEVKRMAESAQRFRKKLCPYTHAYFRLPFHLKSLRTAALSRRTKIMFLPTGMTKRE 139
           YN+LEE KR+AESA R R +LC   H  ++LP+ LKSL++AA SRRTK+ +LP+GM KRE
Sbjct: 64  YNMLEETKRVAESALRRRSQLCK-NHYSYKLPYLLKSLQSAAYSRRTKLWYLPSGMLKRE 123

Query: 140 NNQTRYDE-------TID---HHVNILYID--------------------------SHFT 199
           NNQ+RYD        TI+   H  +++ +D                            F 
Sbjct: 124 NNQSRYDNRSKCISWTIEWRFHSTDVILVDHGVGEDRNLCSVIKNHLKPGPWIHKLKPFC 183

Query: 200 VLNL-----------QGATSPFRELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVV 259
            ++L           +GA +PF+ELD + P+R+    +V +EYPVI+V LPSQ+  F+V+
Sbjct: 184 DVDLDSLKLFIRQYPKGAKAPFKELDIKAPLRKQLAKVVILEYPVIHVYLPSQSYEFKVI 243

Query: 260 KTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDD-NSCNPQVLDLLKVSTSSP-HGA 319
           K  N  + NP D+    +   +  G++FR EEIE+DD +S  P+VL L+K    +P    
Sbjct: 244 KDFN-TTPNPNDSLYDGHGCTN--GITFREEEIEEDDIDSFEPEVLGLMKQMNYNPCLRV 303

Query: 320 TLGNHEFGNGPNSSS---QAEELAVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWEGDF 342
           +  +   G G N+S+      E   +  +E +FEQ LIDTYS++ A++NP D+ ++E +F
Sbjct: 304 SEKSKAEGVGTNNSNPQVDTTEQEDAGNMELEFEQGLIDTYSDLFAEMNPGDYFNFECEF 363

[Close]

BLAST of Carg18699 vs. TAIR 10
Match: AT1G04945.3 (HIT-type Zinc finger family protein )

HSP 1 Score: 258.1 bits (658), Expect = 1.0e-68
Identity = 163/393 (41.48%), Postives = 235/393 (59.80%), Query Frame = 0


Query: 20  SLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSD 79
           S+CEECK NP KYKCP CS+RSC+L CVKAHK+ +GCTGKRK   +VPLS+F+D++LLSD
Sbjct: 256 SVCEECKQNPWKYKCPGCSIRSCALPCVKAHKQRTGCTGKRKFTDVVPLSKFDDNLLLSD 315

Query: 80  YNLLEEVKRMAESAQRFRKKLCPYTHAYFRLPFHLKSLRTAALSRRTKIMFLPTGMTKRE 139
           YN+LEE KR+AESA R R +LC   H  ++LP+ LKSL++AA SRRTK+ +LP+GM KRE
Sbjct: 316 YNMLEETKRVAESALRRRSQLCK-NHYSYKLPYLLKSLQSAAYSRRTKLWYLPSGMLKRE 375

Query: 140 NNQTRYDE-------TID---HHVNILYID--------------------------SHFT 199
           NNQ+RYD        TI+   H  +++ +D                            F 
Sbjct: 376 NNQSRYDNRSKCISWTIEWRFHSTDVILVDHGVGEDRNLCSVIKNHLKPGPWIHKLKPFC 435

Query: 200 VLNL-----------QGATSPFRELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVV 259
            ++L           +GA +PF+ELD + P+R+    +V +EYPVI+V LPSQ+  F+V+
Sbjct: 436 DVDLDSLKLFIRQYPKGAKAPFKELDIKAPLRKQLAKVVILEYPVIHVYLPSQSYEFKVI 495

Query: 260 KTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDD-NSCNPQVLDLLKVSTSSP-HGA 319
           K  N  + NP D+    +   +  G++FR EEIE+DD +S  P+VL L+K    +P    
Sbjct: 496 KDFN-TTPNPNDSLYDGHGCTN--GITFREEEIEEDDIDSFEPEVLGLMKQMNYNPCLRV 555

Query: 320 TLGNHEFGNGPNSSS---QAEELAVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWEGDF 342
           +  +   G G N+S+      E   +  +E +FEQ LIDTYS++ A++NP D+ ++E +F
Sbjct: 556 SEKSKAEGVGTNNSNPQVDTTEQEDAGNMELEFEQGLIDTYSDLFAEMNPGDYFNFECEF 615

[Close]

BLAST of Carg18699 vs. TAIR 10
Match: AT1G04945.1 (HIT-type Zinc finger family protein )

HSP 1 Score: 252.7 bits (644), Expect = 4.3e-67
Identity = 161/374 (43.05%), Postives = 226/374 (60.43%), Query Frame = 0


Query: 20  SLCEECKSNPSKYKCPACSLRSCSLNCVKAHKRHSGCTGKRKHIQLVPLSQFNDSILLSD 79
           S+CEECK NP KYKCP CS+RSC+L CVKAHK+ +GCTGKRK   +VPLS+F+D++LLSD
Sbjct: 4   SVCEECKQNPWKYKCPGCSIRSCALPCVKAHKQRTGCTGKRKFTDVVPLSKFDDNLLLSD 63

Query: 80  YNLLEEVKRMAESAQRFRKKLCPYTHAYFRLPFHLKSLRTAALSRRTKIMFLPTGMTKRE 139
           YN+LEE KR+AESA R R +LC   H  ++LP+ LKSL++AA SRRTK+ +LP+GM KRE
Sbjct: 64  YNMLEETKRVAESALRRRSQLCK-NHYSYKLPYLLKSLQSAAYSRRTKLWYLPSGMLKRE 123

Query: 140 NNQTRYDE-------TID---HHVNILYID--------------------------SHFT 199
           NNQ+RYD        TI+   H  +++ +D                            F 
Sbjct: 124 NNQSRYDNRSKCISWTIEWRFHSTDVILVDHGVGEDRNLCSVIKNHLKPGPWIHKLKPFC 183

Query: 200 VLNL-----------QGATSPFRELDSRLPIRQLFYNLVFVEYPVIYVVLPSQTPNFQVV 259
            ++L           +GA +PF+ELD + P+R+    +V +EYPVI+V LPSQ+  F+V+
Sbjct: 184 DVDLDSLKLFIRQYPKGAKAPFKELDIKAPLRKQLAKVVILEYPVIHVYLPSQSYEFKVI 243

Query: 260 KTANPMSHNPEDTNTGKNDLASHEGVSFRVEEIEDDD-NSCNPQVLDLLKVSTSSP-HGA 319
           K  N  + NP D+    +   +  G++FR EEIE+DD +S  P+VL L+K    +P    
Sbjct: 244 KDFN-TTPNPNDSLYDGHGCTN--GITFREEEIEEDDIDSFEPEVLGLMKQMNYNPCLRV 303

Query: 320 TLGNHEFGNGPNSSS---QAEELAVSKGLEFDFEQDLIDTYSNIMAQINPDDFLDWEGDF 342
           +  +   G G N+S+      E   +  +E +FEQ LIDTYS++ A++NPD       DF
Sbjct: 304 SEKSKAEGVGTNNSNPQVDTTEQEDAGNMELEFEQGLIDTYSDLFAEMNPDT------DF 363

The following BLAST results are available for this feature:

BLAST of Carg18699 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7014219.1	1.2e-191	100.00	Box C/D snoRNA protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023548330.1	7.6e-159	80.11	box C/D snoRNA protein 1-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023548329.1	5.4e-157	76.50	box C/D snoRNA protein 1-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_038900096.1	3.4e-143	69.38	box C/D snoRNA protein 1-like [Benincasa hispida] >XP_038900097.1 box C/D snoRNA...	[more]
XP_031745217.1	2.6e-135	66.75	box C/D snoRNA protein 1 [Cucumis sativus] >KGN45163.1 hypothetical protein Csa_...	[more]

BLAST of Carg18699 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5RF97	1.3e-15	37.69	Box C/D snoRNA protein 1 OS=Pongo abelii OX=9601 GN=ZNHIT6 PE=2 SV=1	[more]
Q9NWK9	6.3e-15	36.92	Box C/D snoRNA protein 1 OS=Homo sapiens OX=9606 GN=ZNHIT6 PE=1 SV=1	[more]
Q3UFB2	1.6e-13	36.03	Box C/D snoRNA protein 1 OS=Mus musculus OX=10090 GN=Znhit6 PE=1 SV=2	[more]
O74906	3.0e-09	35.29	Putative box C/D snoRNA protein SPCC613.07 OS=Schizosaccharomyces pombe (strain ...	[more]
P38772	4.8e-07	27.27	Box C/D snoRNA protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c...	[more]

BLAST of Carg18699 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6N1	1.3e-135	66.75	HIT-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G429490 PE...	[more]
A0A6J1H4S8	1.7e-135	65.48	box C/D snoRNA protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460580 PE=4...	[more]
A0A1S3CEQ2	2.2e-135	67.57	box C/D snoRNA protein 1-like OS=Cucumis melo OX=3656 GN=LOC103499892 PE=4 SV=1	[more]
A0A6J1KUW8	7.0e-134	65.01	box C/D snoRNA protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111497820 PE=4 SV=1	[more]
A0A5D3CJA8	1.7e-132	67.25	Box C/D snoRNA protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of Carg18699 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04945.2	1.0e-68	41.48	HIT-type Zinc finger family protein	[more]
AT1G04945.3	1.0e-68	41.48	HIT-type Zinc finger family protein	[more]
AT1G04945.1	4.3e-67	43.05	HIT-type Zinc finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007529	Zinc finger, HIT-type	PFAM	PF04438	zf-HIT	coord: 20..48 e-value: 2.7E-7 score: 30.3
IPR007529	Zinc finger, HIT-type	PROSITE	PS51083	ZF_HIT	coord: 22..56 score: 10.545033
None	No IPR available	GENE3D	3.30.60.190		coord: 7..62 e-value: 1.2E-10 score: 42.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 270..290
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR13483	UNCHARACTERIZED	coord: 171..336 coord: 15..160
None	No IPR available	PANTHER	PTHR13483:SF3	BOX C/D SNORNA PROTEIN 1	coord: 171..336
None	No IPR available	PANTHER	PTHR13483:SF3	BOX C/D SNORNA PROTEIN 1	coord: 15..160
None	No IPR available	CDD	cd19757	Bbox1	coord: 21..68 e-value: 0.0018751 score: 34.0087
None	No IPR available	SUPERFAMILY	144232	HIT/MYND zinc finger-like	coord: 19..57

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18699-RA	Carg18699-RA	mRNA