Carg18611 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18611
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	zinc finger CCCH domain-containing protein 20-like
Location	Carg_Chr12: 11829776 .. 11830975 (+)
RNA-Seq Expression	Carg18611
Synteny	Carg18611

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGATCGATGAGCAACCTAACCGCCCTAACCAGAAGCTTCATGTTCCGCCATGGACGTTTATGGAAGATCCGGCGTCGGATGGGTACAGTCATTCGCCGGGAAGCGGCGGCAGCGGAAGTGGAAGCGGAAGCGGAAGCGGAAGCGGAGTCAAGTGCGACGGATGTTCCACTGGAGATGGATACTCTCCTTTTTATCTTCAGGAAGCATTGGCGATGCTGCAGCAGTACTTGCCGTCGAAAGAGGCAGAGGTGGAATCGGATCTTGATGCTTCAGGTCGGGAGGCGGATTCTCCGGTGGATACGTATTCCTCCGATCAGTTTCGAATGTACGAGTTCAAGATTAAGAAGTGTCTGCGAGGAAGATCGCACGACTGGACCGAGTGCCCGTTCGCTCATCCCGGCGAGAAGGCTCGCCGGCGAGATCCGAGGAAGTATTACTATTCTGGTACGGCGTGTGCGGATTTTAGGAAGGGGAACTGTAATAAAGGAGATGCGTGTGAGTTCGCTCATGGAGTTTTCGAGTGCTGGCTTCATCCGGCTCGATATAGGACTCAGCCGTGCAAGGATGGAACGAGTTGCCGAAGGAGAGTTTGCTTCTTTGCTCATACGCCAGAGCAACTTAGGATTTTGCCTCAACAGAGTCCTCGGAGTACGAGTTCCATCCCTTCATACGACGGATCTCCTCTTCGGCAAGCTATTGAGGCCTGTGCGAAACAAATGCCCTATTTATCTTCTTCAGGAACATCGACGCCGGTATCTCCTCGAATCGAGTCTCCGCCTCAATCGCCAATGTTTAGATCACTTAATCGACCGCACGCGACTAGTTCGATCAACGAAATGGTAGCGTCGCTACGAAGTTTACAACTCCACAAGGAACTCGGTAAAGTGCAATCTCCTTCTTCGTTGTGGAATGTTCAAGTCGGATCTCCTGTGTTCGGATCTCCAGGGGAATCCAGCGCTCGTTCTGGCTTCAGTAGCCTTCCAGATACTCCAACTCCTCCTGCCGTCCGATATCTCGATTTCTGGGACCTAGGTAGCGGCGAGGAACAGGCGATGGCGCGAGTGGAGTCCGGGAGAGATTTACGAGCAAAAATGCTGGAGAAACTACGAAAGGAGAACTCCGTCGCGTGCGGCGATCAGGAGAAACCCGGCGGCGGAAGTGTGGACGTTGGTTGGATCTCGGAGCTTCTCAAGTAA

mRNA sequence

ATGATGATCGATGAGCAACCTAACCGCCCTAACCAGAAGCTTCATGTTCCGCCATGGACGTTTATGGAAGATCCGGCGTCGGATGGGTACAGTCATTCGCCGGGAAGCGGCGGCAGCGGAAGTGGAAGCGGAAGCGGAAGCGGAAGCGGAGTCAAGTGCGACGGATGTTCCACTGGAGATGGATACTCTCCTTTTTATCTTCAGGAAGCATTGGCGATGCTGCAGCAGTACTTGCCGTCGAAAGAGGCAGAGGTGGAATCGGATCTTGATGCTTCAGGTCGGGAGGCGGATTCTCCGGTGGATACGTATTCCTCCGATCAGTTTCGAATGTACGAGTTCAAGATTAAGAAGTGTCTGCGAGGAAGATCGCACGACTGGACCGAGTGCCCGTTCGCTCATCCCGGCGAGAAGGCTCGCCGGCGAGATCCGAGGAAGTATTACTATTCTGGTACGGCGTGTGCGGATTTTAGGAAGGGGAACTGTAATAAAGGAGATGCGTGTGAGTTCGCTCATGGAGTTTTCGAGTGCTGGCTTCATCCGGCTCGATATAGGACTCAGCCGTGCAAGGATGGAACGAGTTGCCGAAGGAGAGTTTGCTTCTTTGCTCATACGCCAGAGCAACTTAGGATTTTGCCTCAACAGAGTCCTCGGAGTACGAGTTCCATCCCTTCATACGACGGATCTCCTCTTCGGCAAGCTATTGAGGCCTGTGCGAAACAAATGCCCTATTTATCTTCTTCAGGAACATCGACGCCGGTATCTCCTCGAATCGAGTCTCCGCCTCAATCGCCAATGTTTAGATCACTTAATCGACCGCACGCGACTAGTTCGATCAACGAAATGGTAGCGTCGCTACGAAGTTTACAACTCCACAAGGAACTCGGTAAAGTGCAATCTCCTTCTTCGTTGTGGAATGTTCAAGTCGGATCTCCTGTGTTCGGATCTCCAGGGGAATCCAGCGCTCGTTCTGGCTTCAGTAGCCTTCCAGATACTCCAACTCCTCCTGCCGTCCGATATCTCGATTTCTGGGACCTAGGTAGCGGCGAGGAACAGGCGATGGCGCGAGTGGAGTCCGGGAGAGATTTACGAGCAAAAATGCTGGAGAAACTACGAAAGGAGAACTCCGTCGCGTGCGGCGATCAGGAGAAACCCGGCGGCGGAAGTGTGGACGTTGGTTGGATCTCGGAGCTTCTCAAGTAA

Coding sequence (CDS)

ATGATGATCGATGAGCAACCTAACCGCCCTAACCAGAAGCTTCATGTTCCGCCATGGACGTTTATGGAAGATCCGGCGTCGGATGGGTACAGTCATTCGCCGGGAAGCGGCGGCAGCGGAAGTGGAAGCGGAAGCGGAAGCGGAAGCGGAGTCAAGTGCGACGGATGTTCCACTGGAGATGGATACTCTCCTTTTTATCTTCAGGAAGCATTGGCGATGCTGCAGCAGTACTTGCCGTCGAAAGAGGCAGAGGTGGAATCGGATCTTGATGCTTCAGGTCGGGAGGCGGATTCTCCGGTGGATACGTATTCCTCCGATCAGTTTCGAATGTACGAGTTCAAGATTAAGAAGTGTCTGCGAGGAAGATCGCACGACTGGACCGAGTGCCCGTTCGCTCATCCCGGCGAGAAGGCTCGCCGGCGAGATCCGAGGAAGTATTACTATTCTGGTACGGCGTGTGCGGATTTTAGGAAGGGGAACTGTAATAAAGGAGATGCGTGTGAGTTCGCTCATGGAGTTTTCGAGTGCTGGCTTCATCCGGCTCGATATAGGACTCAGCCGTGCAAGGATGGAACGAGTTGCCGAAGGAGAGTTTGCTTCTTTGCTCATACGCCAGAGCAACTTAGGATTTTGCCTCAACAGAGTCCTCGGAGTACGAGTTCCATCCCTTCATACGACGGATCTCCTCTTCGGCAAGCTATTGAGGCCTGTGCGAAACAAATGCCCTATTTATCTTCTTCAGGAACATCGACGCCGGTATCTCCTCGAATCGAGTCTCCGCCTCAATCGCCAATGTTTAGATCACTTAATCGACCGCACGCGACTAGTTCGATCAACGAAATGGTAGCGTCGCTACGAAGTTTACAACTCCACAAGGAACTCGGTAAAGTGCAATCTCCTTCTTCGTTGTGGAATGTTCAAGTCGGATCTCCTGTGTTCGGATCTCCAGGGGAATCCAGCGCTCGTTCTGGCTTCAGTAGCCTTCCAGATACTCCAACTCCTCCTGCCGTCCGATATCTCGATTTCTGGGACCTAGGTAGCGGCGAGGAACAGGCGATGGCGCGAGTGGAGTCCGGGAGAGATTTACGAGCAAAAATGCTGGAGAAACTACGAAAGGAGAACTCCGTCGCGTGCGGCGATCAGGAGAAACCCGGCGGCGGAAGTGTGGACGTTGGTTGGATCTCGGAGCTTCTCAAGTAA

Protein sequence

MMIDEQPNRPNQKLHVPPWTFMEDPASDGYSHSPGSGGSGSGSGSGSGSGVKCDGCSTGDGYSPFYLQEALAMLQQYLPSKEAEVESDLDASGREADSPVDTYSSDQFRMYEFKIKKCLRGRSHDWTECPFAHPGEKARRRDPRKYYYSGTACADFRKGNCNKGDACEFAHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYDGSPLRQAIEACAKQMPYLSSSGTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQSPSSLWNVQVGSPVFGSPGESSARSGFSSLPDTPTPPAVRYLDFWDLGSGEEQAMARVESGRDLRAKMLEKLRKENSVACGDQEKPGGGSVDVGWISELLK

Homology

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BLAST of Carg18611 vs. NCBI nr
Match: KAG6586463.1 (Zinc finger CCCH domain-containing protein 20, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021319.1 Zinc finger CCCH domain-containing protein 20, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 817.4 bits (2110), Expect = 5.5e-233
Identity = 399/399 (100.00%), Postives = 399/399 (100.00%), Query Frame = 0


Query: 1   MMIDEQPNRPNQKLHVPPWTFMEDPASDGYSHSPGSGGSGSGSGSGSGSGVKCDGCSTGD 60
           MMIDEQPNRPNQKLHVPPWTFMEDPASDGYSHSPGSGGSGSGSGSGSGSGVKCDGCSTGD
Sbjct: 1   MMIDEQPNRPNQKLHVPPWTFMEDPASDGYSHSPGSGGSGSGSGSGSGSGVKCDGCSTGD 60

Query: 61  GYSPFYLQEALAMLQQYLPSKEAEVESDLDASGREADSPVDTYSSDQFRMYEFKIKKCLR 120
           GYSPFYLQEALAMLQQYLPSKEAEVESDLDASGREADSPVDTYSSDQFRMYEFKIKKCLR
Sbjct: 61  GYSPFYLQEALAMLQQYLPSKEAEVESDLDASGREADSPVDTYSSDQFRMYEFKIKKCLR 120

Query: 121 GRSHDWTECPFAHPGEKARRRDPRKYYYSGTACADFRKGNCNKGDACEFAHGVFECWLHP 180
           GRSHDWTECPFAHPGEKARRRDPRKYYYSGTACADFRKGNCNKGDACEFAHGVFECWLHP
Sbjct: 121 GRSHDWTECPFAHPGEKARRRDPRKYYYSGTACADFRKGNCNKGDACEFAHGVFECWLHP 180

Query: 181 ARYRTQPCKDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYDGSPLRQAIEACAKQ 240
           ARYRTQPCKDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYDGSPLRQAIEACAKQ
Sbjct: 181 ARYRTQPCKDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYDGSPLRQAIEACAKQ 240

Query: 241 MPYLSSSGTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQSP 300
           MPYLSSSGTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQSP
Sbjct: 241 MPYLSSSGTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQSP 300

Query: 301 SSLWNVQVGSPVFGSPGESSARSGFSSLPDTPTPPAVRYLDFWDLGSGEEQAMARVESGR 360
           SSLWNVQVGSPVFGSPGESSARSGFSSLPDTPTPPAVRYLDFWDLGSGEEQAMARVESGR
Sbjct: 301 SSLWNVQVGSPVFGSPGESSARSGFSSLPDTPTPPAVRYLDFWDLGSGEEQAMARVESGR 360

Query: 361 DLRAKMLEKLRKENSVACGDQEKPGGGSVDVGWISELLK 400
           DLRAKMLEKLRKENSVACGDQEKPGGGSVDVGWISELLK
Sbjct: 361 DLRAKMLEKLRKENSVACGDQEKPGGGSVDVGWISELLK 399

[Close]

BLAST of Carg18611 vs. NCBI nr
Match: XP_023536933.1 (zinc finger CCCH domain-containing protein 20-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 806.2 bits (2081), Expect = 1.3e-229
Identity = 395/399 (99.00%), Postives = 395/399 (99.00%), Query Frame = 0


Query: 1   MMIDEQPNRPNQKLHVPPWTFMEDPASDGYSHSPGSGGSGSGSGSGSGSGVKCDGCSTGD 60
           MMIDEQPNRPNQKLHVPPWTFMEDPASDGYSHSPGSG    GSGSGSGSGVKCDGCSTGD
Sbjct: 1   MMIDEQPNRPNQKLHVPPWTFMEDPASDGYSHSPGSG----GSGSGSGSGVKCDGCSTGD 60

Query: 61  GYSPFYLQEALAMLQQYLPSKEAEVESDLDASGREADSPVDTYSSDQFRMYEFKIKKCLR 120
           GYSPFYLQEALAMLQQYLPSKEAEVESDLDASGREADSPVDTYSSDQFRMYEFKIKKCLR
Sbjct: 61  GYSPFYLQEALAMLQQYLPSKEAEVESDLDASGREADSPVDTYSSDQFRMYEFKIKKCLR 120

Query: 121 GRSHDWTECPFAHPGEKARRRDPRKYYYSGTACADFRKGNCNKGDACEFAHGVFECWLHP 180
           GRSHDWTECPFAHPGEKARRRDPRKYYYSGTACADFRKGNCNKGDACEFAHGVFECWLHP
Sbjct: 121 GRSHDWTECPFAHPGEKARRRDPRKYYYSGTACADFRKGNCNKGDACEFAHGVFECWLHP 180

Query: 181 ARYRTQPCKDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYDGSPLRQAIEACAKQ 240
           ARYRTQPCKDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYDGSPLRQAIEACAKQ
Sbjct: 181 ARYRTQPCKDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYDGSPLRQAIEACAKQ 240

Query: 241 MPYLSSSGTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQSP 300
           MPYLSSSGTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQSP
Sbjct: 241 MPYLSSSGTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQSP 300

Query: 301 SSLWNVQVGSPVFGSPGESSARSGFSSLPDTPTPPAVRYLDFWDLGSGEEQAMARVESGR 360
           SSLWNVQVGSPVFGSPGESSARSGFSSLPDTPTPPAVRYLDFWDLGSGEEQAMARVESGR
Sbjct: 301 SSLWNVQVGSPVFGSPGESSARSGFSSLPDTPTPPAVRYLDFWDLGSGEEQAMARVESGR 360

Query: 361 DLRAKMLEKLRKENSVACGDQEKPGGGSVDVGWISELLK 400
           DLRAKMLEKLRKENSVACGDQEKPGGGSVDVGWISELLK
Sbjct: 361 DLRAKMLEKLRKENSVACGDQEKPGGGSVDVGWISELLK 395

[Close]

BLAST of Carg18611 vs. NCBI nr
Match: XP_022937473.1 (zinc finger CCCH domain-containing protein 20-like [Cucurbita moschata])

HSP 1 Score: 802.0 bits (2070), Expect = 2.4e-228
Identity = 393/399 (98.50%), Postives = 393/399 (98.50%), Query Frame = 0


Query: 1   MMIDEQPNRPNQKLHVPPWTFMEDPASDGYSHSPGSGGSGSGSGSGSGSGVKCDGCSTGD 60
           MMIDEQPNRPNQKLHVPPWTFMEDPASDGYSHSPGSG    GSGSGSGSGVKCDGCSTGD
Sbjct: 1   MMIDEQPNRPNQKLHVPPWTFMEDPASDGYSHSPGSG----GSGSGSGSGVKCDGCSTGD 60

Query: 61  GYSPFYLQEALAMLQQYLPSKEAEVESDLDASGREADSPVDTYSSDQFRMYEFKIKKCLR 120
           GYSPFYLQEALAMLQQYLPSKEAEVESDLDASGREADSPVDTYSSDQFRMYEFKIKKCLR
Sbjct: 61  GYSPFYLQEALAMLQQYLPSKEAEVESDLDASGREADSPVDTYSSDQFRMYEFKIKKCLR 120

Query: 121 GRSHDWTECPFAHPGEKARRRDPRKYYYSGTACADFRKGNCNKGDACEFAHGVFECWLHP 180
           GRSHDWTECPFAHPGEKARRRDPRKYYYSGTACADFRKGNC KGDACEFAHGVFECWLHP
Sbjct: 121 GRSHDWTECPFAHPGEKARRRDPRKYYYSGTACADFRKGNCTKGDACEFAHGVFECWLHP 180

Query: 181 ARYRTQPCKDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYDGSPLRQAIEACAKQ 240
           ARYRTQPCKDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYDGSPLRQAIEACAKQ
Sbjct: 181 ARYRTQPCKDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYDGSPLRQAIEACAKQ 240

Query: 241 MPYLSSSGTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQSP 300
           MPYLSSSGTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQSP
Sbjct: 241 MPYLSSSGTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQSP 300

Query: 301 SSLWNVQVGSPVFGSPGESSARSGFSSLPDTPTPPAVRYLDFWDLGSGEEQAMARVESGR 360
           SSLWNVQVGSPVFGSPGESSARSGFSSLPDTPTPPAVRYLDFWDLG GEEQAMARVESGR
Sbjct: 301 SSLWNVQVGSPVFGSPGESSARSGFSSLPDTPTPPAVRYLDFWDLGCGEEQAMARVESGR 360

Query: 361 DLRAKMLEKLRKENSVACGDQEKPGGGSVDVGWISELLK 400
           DLRAKMLEKLRKENSVACGDQEKPGGGSVDVGWISELLK
Sbjct: 361 DLRAKMLEKLRKENSVACGDQEKPGGGSVDVGWISELLK 395

[Close]

BLAST of Carg18611 vs. NCBI nr
Match: XP_022965787.1 (zinc finger CCCH domain-containing protein 20-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 799.3 bits (2063), Expect = 1.5e-227
Identity = 391/399 (97.99%), Postives = 392/399 (98.25%), Query Frame = 0


Query: 1   MMIDEQPNRPNQKLHVPPWTFMEDPASDGYSHSPGSGGSGSGSGSGSGSGVKCDGCSTGD 60
           MMIDEQPNRPNQKLHVPPW FMEDPASDGYSHSPGSG  GSGSGSGSGSGVKCDGCS+GD
Sbjct: 1   MMIDEQPNRPNQKLHVPPWAFMEDPASDGYSHSPGSG--GSGSGSGSGSGVKCDGCSSGD 60

Query: 61  GYSPFYLQEALAMLQQYLPSKEAEVESDLDASGREADSPVDTYSSDQFRMYEFKIKKCLR 120
           GYSPFYLQEALAMLQQYLPSKEAEVESDLD SGRE DSPVDTYSSDQFRMYEFKIKKCLR
Sbjct: 61  GYSPFYLQEALAMLQQYLPSKEAEVESDLDVSGREPDSPVDTYSSDQFRMYEFKIKKCLR 120

Query: 121 GRSHDWTECPFAHPGEKARRRDPRKYYYSGTACADFRKGNCNKGDACEFAHGVFECWLHP 180
           GRSHDWTECPFAHPGEKARRRDPRKYYYSGTACADFRKGNCNKGDACEFAHGVFECWLHP
Sbjct: 121 GRSHDWTECPFAHPGEKARRRDPRKYYYSGTACADFRKGNCNKGDACEFAHGVFECWLHP 180

Query: 181 ARYRTQPCKDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYDGSPLRQAIEACAKQ 240
           ARYRTQPCKDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYDGSPLRQAIEACAKQ
Sbjct: 181 ARYRTQPCKDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYDGSPLRQAIEACAKQ 240

Query: 241 MPYLSSSGTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQSP 300
           MPYLSSSGTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQSP
Sbjct: 241 MPYLSSSGTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQSP 300

Query: 301 SSLWNVQVGSPVFGSPGESSARSGFSSLPDTPTPPAVRYLDFWDLGSGEEQAMARVESGR 360
           SSLWNVQVGSPVFGSPGESSARSGF SLPDTPTPPAVRYLDFWDLG GEEQAMARVESGR
Sbjct: 301 SSLWNVQVGSPVFGSPGESSARSGFGSLPDTPTPPAVRYLDFWDLGCGEEQAMARVESGR 360

Query: 361 DLRAKMLEKLRKENSVACGDQEKPGGGSVDVGWISELLK 400
           DLRAKMLEKLRKENSVACGDQEKPGGGSVDVGWISELLK
Sbjct: 361 DLRAKMLEKLRKENSVACGDQEKPGGGSVDVGWISELLK 397

[Close]

BLAST of Carg18611 vs. NCBI nr
Match: XP_022965788.1 (zinc finger CCCH domain-containing protein 20-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 780.8 bits (2015), Expect = 5.7e-222
Identity = 380/399 (95.24%), Postives = 381/399 (95.49%), Query Frame = 0


Query: 1   MMIDEQPNRPNQKLHVPPWTFMEDPASDGYSHSPGSGGSGSGSGSGSGSGVKCDGCSTGD 60
           MMIDEQPNRPNQKLHVPPW FMEDPASDGYSHSP             GSGVKCDGCS+GD
Sbjct: 1   MMIDEQPNRPNQKLHVPPWAFMEDPASDGYSHSP-------------GSGVKCDGCSSGD 60

Query: 61  GYSPFYLQEALAMLQQYLPSKEAEVESDLDASGREADSPVDTYSSDQFRMYEFKIKKCLR 120
           GYSPFYLQEALAMLQQYLPSKEAEVESDLD SGRE DSPVDTYSSDQFRMYEFKIKKCLR
Sbjct: 61  GYSPFYLQEALAMLQQYLPSKEAEVESDLDVSGREPDSPVDTYSSDQFRMYEFKIKKCLR 120

Query: 121 GRSHDWTECPFAHPGEKARRRDPRKYYYSGTACADFRKGNCNKGDACEFAHGVFECWLHP 180
           GRSHDWTECPFAHPGEKARRRDPRKYYYSGTACADFRKGNCNKGDACEFAHGVFECWLHP
Sbjct: 121 GRSHDWTECPFAHPGEKARRRDPRKYYYSGTACADFRKGNCNKGDACEFAHGVFECWLHP 180

Query: 181 ARYRTQPCKDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYDGSPLRQAIEACAKQ 240
           ARYRTQPCKDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYDGSPLRQAIEACAKQ
Sbjct: 181 ARYRTQPCKDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYDGSPLRQAIEACAKQ 240

Query: 241 MPYLSSSGTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQSP 300
           MPYLSSSGTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQSP
Sbjct: 241 MPYLSSSGTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQSP 300

Query: 301 SSLWNVQVGSPVFGSPGESSARSGFSSLPDTPTPPAVRYLDFWDLGSGEEQAMARVESGR 360
           SSLWNVQVGSPVFGSPGESSARSGF SLPDTPTPPAVRYLDFWDLG GEEQAMARVESGR
Sbjct: 301 SSLWNVQVGSPVFGSPGESSARSGFGSLPDTPTPPAVRYLDFWDLGCGEEQAMARVESGR 360

Query: 361 DLRAKMLEKLRKENSVACGDQEKPGGGSVDVGWISELLK 400
           DLRAKMLEKLRKENSVACGDQEKPGGGSVDVGWISELLK
Sbjct: 361 DLRAKMLEKLRKENSVACGDQEKPGGGSVDVGWISELLK 386

[Close]

BLAST of Carg18611 vs. ExPASy Swiss-Prot
Match: O82199 (Zinc finger CCCH domain-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=At2g19810 PE=2 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 1.0e-96
Identity = 200/404 (49.50%), Postives = 253/404 (62.62%), Query Frame = 0


Query: 1   MMIDEQPNRPNQKLHVPPWTFMEDPASDGYSHSPGSGGSGSGSGSGSGSGVKCDGCSTGD 60
           MMI E     N  +H+PPW   ED        SP  G S                     
Sbjct: 1   MMIGESHRGFNPTVHIPPWPLSEDLTVSDIYGSPDGGSS--------------------- 60

Query: 61  GYSPFYLQEALAMLQQYLPSKEAEVESDLDASGREADSPVDTYSSDQFRMYEFKIKKCLR 120
                 + EALA LQ+YLPS E + +SD D SG   DSP+D Y+ D FRMYEFK+++C R
Sbjct: 61  ------MMEALAELQRYLPSNEPDPDSDPDLSG--PDSPIDAYTCDHFRMYEFKVRRCAR 120

Query: 121 GRSHDWTECPFAHPGEKARRRDPRKYYYSGTACADFRKGNCNKGDACEFAHGVFECWLHP 180
           GRSHDWTECP+AHPGEKARRRDPRK++YSGTAC +FRKG C +GDACEF+HGVFECWLHP
Sbjct: 121 GRSHDWTECPYAHPGEKARRRDPRKFHYSGTACPEFRKGCCKRGDACEFSHGVFECWLHP 180

Query: 181 ARYRTQPCKDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYD--GSPLRQAIEACA 240
           ARYRTQPCKDG +CRRRVCFFAH+P+Q+R+LP QSP     + S+D     +R+A +   
Sbjct: 181 ARYRTQPCKDGGNCRRRVCFFAHSPDQIRVLPNQSP---DRVDSFDVLSPTIRRAFQFS- 240

Query: 241 KQMPYLSSSGTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQ 300
                +S S  S PVSPR +S     +   L+R   ++  N++VASLR+LQL+K      
Sbjct: 241 -----ISPSSNSPPVSPRGDSDSSCSL---LSRSLGSNLGNDVVASLRNLQLNK---VKS 300

Query: 301 SPSSLWNVQVG--SPVFGSPGESSARSGFSSLPDTPTPPAVRYLDFWDLGSGEEQAMARV 360
           S SS +N Q+G     FGSP  S    GF SLP TPT P   +++ W+ G  EE AM RV
Sbjct: 301 SLSSSYNNQIGGYGSGFGSPRGSVLGPGFRSLPTTPTRPG--FMNIWENGLEEEPAMERV 358

Query: 361 ESGRDLRAKMLEKLRKENSVAC--GDQEKPGGGSVDVGWISELL 399
           ESGR+LRA++ EKL KEN +     D ++  G + DVGW+S+L+
Sbjct: 361 ESGRELRAQLFEKLSKENCMGRIEPDPDQGAGDTPDVGWVSDLV 358

[Close]

BLAST of Carg18611 vs. ExPASy Swiss-Prot
Match: Q9M0G2 (Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana OX=3702 GN=At4g29190 PE=2 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 1.4e-90
Identity = 187/336 (55.65%), Postives = 228/336 (67.86%), Query Frame = 0


Query: 69  EALAMLQQYLPSKEAEVESDLDASGREADSPVDTYSSDQFRMYEFKIKKCLRGRSHDWTE 128
           EALA LQ+YLPS E + ES  D  G   DSP+D YS D FRMY+FK+++C RGRSHDWTE
Sbjct: 43  EALAGLQRYLPSNEPDPESYPDLLG--PDSPIDAYSCDHFRMYDFKVRRCARGRSHDWTE 102

Query: 129 CPFAHPGEKARRRDPRKYYYSGTACADFRKGNCNKGDACEFAHGVFECWLHPARYRTQPC 188
           CP+AHPGEKARRRDPRKY+YSGTAC DFRKG C KGD+CEFAHGVFECWLHPARYRTQPC
Sbjct: 103 CPYAHPGEKARRRDPRKYHYSGTACPDFRKGGCKKGDSCEFAHGVFECWLHPARYRTQPC 162

Query: 189 KDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYD-GSPLRQAIEACAKQMPYLSSS 248
           KDG +C R++CFFAH+P+QLR L  +SP     + S+D  SP+R    A A Q+     S
Sbjct: 163 KDGGNCLRKICFFAHSPDQLRFLHTRSP---DRVDSFDVSSPIR----ARAFQLSISPVS 222

Query: 249 GTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQSPSSLWNVQ 308
           G S P+SPR +S   SPM +SL+R   + SIN++V S R+LQ           +S+ +  
Sbjct: 223 G-SPPMSPRADS-ESSPMTQSLSRSLGSCSINDVVPSFRNLQF----------NSVKSFP 282

Query: 309 VGSPV--FGSPGESSARSGFSSLPDTPTPPAVRYLDFWDLGSGEEQAMAR-VESGRDLRA 368
             +P+  FGSP  S    GF SLP TPT P    LD W+ G  EE  M R VESGR+LR 
Sbjct: 283 RNNPLFGFGSPRGSILGPGFQSLPTTPTRPG--NLDIWEYGLEEEPVMERVVESGRELRE 342

Query: 369 KMLEKLRKENSV--ACGDQEKPGGGSVDVGWISELL 399
           KM EKL KEN +     D ++  G + DVGW+S+LL
Sbjct: 343 KMREKLHKENCMDRVAQDPDQNLGEAPDVGWVSDLL 355

[Close]

BLAST of Carg18611 vs. ExPASy Swiss-Prot
Match: Q9FU27 (Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0192000 PE=2 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 3.1e-90
Identity = 199/408 (48.77%), Postives = 247/408 (60.54%), Query Frame = 0


Query: 16  VPPWTFMEDPASDGYSHSPGSGGSGSGSGSGSGSGVKCDGCSTGDGYSPFYLQEALAMLQ 75
           VPPW           SH P SG    G G G            GD  +P+     +A L+
Sbjct: 11  VPPW-----------SHLPVSGVDVLGGGGGG-----------GDEMTPY----VIAALR 70

Query: 76  QYLPSKEAEVESDLDASGREADSPVDTYSSDQFRMYEFKIKKCLRGRSHDWTECPFAHPG 135
            YLP+ +  V +D +       + VD Y+ D+FRMYEFK+++C RGRSHDWTECPFAHPG
Sbjct: 71  DYLPANDVGVGADEEEEAAAMAAAVDAYACDEFRMYEFKVRRCARGRSHDWTECPFAHPG 130

Query: 136 EKARRRDPRKYYYSGTACADFRKGNCNKGDACEFAHGVFECWLHPARYRTQPCKDGTSCR 195
           EKARRRDPRKY+YSGTAC DFRKG C +GDACE+AHGVFECWLHPARYRTQPCKDGT+CR
Sbjct: 131 EKARRRDPRKYHYSGTACPDFRKGGCKRGDACEYAHGVFECWLHPARYRTQPCKDGTACR 190

Query: 196 RRVCFFAHTPEQLRILP--QQSPRSTSSIP---SYDGSPLRQAIEACAKQMPYLSSSGTS 255
           RRVCFFAHTP+QLR+LP  Q SPRS +S P   SYDGSPLR+           +SSS TS
Sbjct: 191 RRVCFFAHTPDQLRVLPAQQSSPRSVASSPLAESYDGSPLRRQAFESYLTKTIMSSSPTS 250

Query: 256 T----PVSPRIESPPQSP----MFRSLNRPHATSSINEMVASLRSLQLHKELGKVQSPSS 315
           T    P SP  ESPP SP      R  + P   S +N+++AS R L+L+K      SPS 
Sbjct: 251 TLMSPPKSPPSESPPLSPDGAAAIRRGSWPGVGSPVNDVLASFRQLRLNK---VKSSPSG 310

Query: 316 LWNVQVGSPVFGSPGESSARSGFSSLPDTPTPPAVRY---------LDFWDLG-SGEEQA 375
            W+    S V+GSP    A +G  SLP TP                L+  DLG  G+E+ 
Sbjct: 311 GWSYPSSSAVYGSP---KAATGLYSLPTTPLASTATVTTASSFMPNLEPLDLGLIGDEEP 370

Query: 376 MARVESGRDLRAKMLEKLRKENSVACGDQE--KPGGGSVDVGWISELL 399
           + RVESGR LR K+ E+L ++ +++ GD       G  +DV W+S+L+
Sbjct: 371 VQRVESGRALREKVFERLSRDGAIS-GDATAFATAGVGLDVDWVSDLI 385

[Close]

BLAST of Carg18611 vs. ExPASy Swiss-Prot
Match: Q6L4N4 (Zinc finger CCCH domain-containing protein 35 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0195200 PE=2 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 5.4e-82
Identity = 196/421 (46.56%), Postives = 239/421 (56.77%), Query Frame = 0


Query: 15  HVPPWTFMEDPASDGYSHSPGSGGSGSGSGSGSGSGVKCDGCSTGDGYSPFYLQEALAML 74
           H PPW          +  SP SG  G   G G  S V           +P++L   L  L
Sbjct: 9   HAPPW--------QQHVASPVSGVEG---GGGRESEVVA---------APYHL---LDTL 68

Query: 75  QQYLPSKEAEVESDLDASGREADSPVDTYSSDQFRMYEFKIKKCLRGRSHDWTECPFAHP 134
           + YLPS EA    D + +   A + VD Y+ D+FRMYEFK+++C RGRSHDWTECPFAHP
Sbjct: 69  RHYLPSNEAAAAEDEEEAAAVA-AAVDAYACDEFRMYEFKVRRCARGRSHDWTECPFAHP 128

Query: 135 GEKARRRDPRKYYYSGTACADFRKGNCNKGDACEFAHGVFECWLHPARYRTQPCKDGTSC 194
           GEKARRRDPR+Y YSGTAC DFRKG C +GDACEFAHGVFECWLHPARYRTQPCKDGT+C
Sbjct: 129 GEKARRRDPRRYCYSGTACPDFRKGGCKRGDACEFAHGVFECWLHPARYRTQPCKDGTAC 188

Query: 195 RRRVCFFAHTPEQLRILPQQSPRSTSS----------------IPSYDGSPLRQAIEACA 254
           RRRVCFFAHTP+QLR+LP    + ++S                  SYDGSPLR+      
Sbjct: 189 RRRVCFFAHTPDQLRVLPPSQQQGSNSPRGCGGGGAGAAASPLAESYDGSPLRRQAFESY 248

Query: 255 KQMPYLSSSGTST----PVSPRIESPPQSPMFRSLNRPHA----TSSINEMVASLRSLQL 314
                +SSS TST    P SP  ESPP SP      R  A     S +N++  SLR L+ 
Sbjct: 249 LTKSIMSSSPTSTLVSPPRSPPSESPPLSPDAAGALRRGAWAGVGSPVNDVHVSLRQLR- 308

Query: 315 HKELGKVQSPSSLWNVQVGSPVFGSPGE--SSARSGFSSLPDTPT----------PPAVR 374
              LG  +S  S  +       +GSP    ++A +   SLP TPT            A  
Sbjct: 309 ---LGSPRSAPSCASFLPAGYQYGSPKSPAAAAAAALYSLPSTPTRLSPVTVTTASGATV 368

Query: 375 YLDFWDLG-SGEEQAMARVESGRDLRAKMLEKLRKENSVACGDQEKPGGGSVDVGWISEL 399
            ++  DLG   EEQ M RVESGR LR K+ E+L KE +V+        G + DVGW+S+L
Sbjct: 369 TVEPLDLGLIEEEQPMERVESGRALREKVFERLSKEATVSTDAAAAAAGVAPDVGWVSDL 401

[Close]

BLAST of Carg18611 vs. ExPASy Swiss-Prot
Match: O82307 (Zinc finger CCCH domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN=At2g25900 PE=2 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 2.9e-72
Identity = 168/380 (44.21%), Postives = 214/380 (56.32%), Query Frame = 0


Query: 1   MMIDEQPNRPNQKLHVPPWTFMEDPASDGYSHSPGSGGSGSGSGSGSGSGVKCDGCSTGD 60
           MMI E  NRP+  +H+P W  + DP               + + S   S V  +  S  D
Sbjct: 1   MMIGENKNRPHPTIHIPQWDQINDP---------------TATISSPFSSVNLN--SVND 60

Query: 61  -GYSPFYLQEALAMLQQYLPSKEAEVESDLDASGREADSPVDTYSSDQFRMYEFKIKKCL 120
             +SP    ++ A L +YLPS E   +SD  +SG E+    D++SSD+FR+YEFKI++C 
Sbjct: 61  YPHSPSPYLDSFASLFRYLPSNELTNDSD-SSSGDESSPLTDSFSSDEFRIYEFKIRRCA 120

Query: 121 RGRSHDWTECPFAHPGEKARRRDPRKYYYSGTACADFRKGNCNKGDACEFAHGVFECWLH 180
           RGRSHDWTECPFAHPGEKARRRDPRK++YSGTAC +FRKG+C +GD+CEF+HGVFECWLH
Sbjct: 121 RGRSHDWTECPFAHPGEKARRRDPRKFHYSGTACPEFRKGSCRRGDSCEFSHGVFECWLH 180

Query: 181 PARYRTQPCKDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYDGSPLRQAIEACAK 240
           P+RYRTQPCKDGTSCRRR+CFFAHT EQLR+LP               SP          
Sbjct: 181 PSRYRTQPCKDGTSCRRRICFFAHTTEQLRVLPCSLDPDLGFFSGLATSP---------- 240

Query: 241 QMPYLSSSGTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQS 300
                +S   S   SP  ESPP SP            S  E++AS+R +QL+        
Sbjct: 241 -----TSILVSPSFSPPSESPPLSP------------STGELIASMRKMQLNG------- 300

Query: 301 PSSLWNVQVGSPVFGSPGESSARSGFSSL---PDTPTPPAVRYLDFWDLGSGEEQAMARV 360
                    G   + SP  S+ R  FSS        T P +R  +       E  AM  V
Sbjct: 301 ---------GGCSWSSPMRSAVRLPFSSSLRPIQAATWPRIREFEI-----EEAPAMEFV 314

Query: 361 ESGRDLRAKMLEKLRKENSV 377
           ESG++LRA+M  +L +ENS+
Sbjct: 361 ESGKELRAEMYARLSRENSL 314

[Close]

BLAST of Carg18611 vs. ExPASy TrEMBL
Match: A0A6J1FG51 (zinc finger CCCH domain-containing protein 20-like OS=Cucurbita moschata OX=3662 GN=LOC111443876 PE=4 SV=1)

HSP 1 Score: 802.0 bits (2070), Expect = 1.1e-228
Identity = 393/399 (98.50%), Postives = 393/399 (98.50%), Query Frame = 0


Query: 1   MMIDEQPNRPNQKLHVPPWTFMEDPASDGYSHSPGSGGSGSGSGSGSGSGVKCDGCSTGD 60
           MMIDEQPNRPNQKLHVPPWTFMEDPASDGYSHSPGSG    GSGSGSGSGVKCDGCSTGD
Sbjct: 1   MMIDEQPNRPNQKLHVPPWTFMEDPASDGYSHSPGSG----GSGSGSGSGVKCDGCSTGD 60

Query: 61  GYSPFYLQEALAMLQQYLPSKEAEVESDLDASGREADSPVDTYSSDQFRMYEFKIKKCLR 120
           GYSPFYLQEALAMLQQYLPSKEAEVESDLDASGREADSPVDTYSSDQFRMYEFKIKKCLR
Sbjct: 61  GYSPFYLQEALAMLQQYLPSKEAEVESDLDASGREADSPVDTYSSDQFRMYEFKIKKCLR 120

Query: 121 GRSHDWTECPFAHPGEKARRRDPRKYYYSGTACADFRKGNCNKGDACEFAHGVFECWLHP 180
           GRSHDWTECPFAHPGEKARRRDPRKYYYSGTACADFRKGNC KGDACEFAHGVFECWLHP
Sbjct: 121 GRSHDWTECPFAHPGEKARRRDPRKYYYSGTACADFRKGNCTKGDACEFAHGVFECWLHP 180

Query: 181 ARYRTQPCKDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYDGSPLRQAIEACAKQ 240
           ARYRTQPCKDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYDGSPLRQAIEACAKQ
Sbjct: 181 ARYRTQPCKDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYDGSPLRQAIEACAKQ 240

Query: 241 MPYLSSSGTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQSP 300
           MPYLSSSGTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQSP
Sbjct: 241 MPYLSSSGTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQSP 300

Query: 301 SSLWNVQVGSPVFGSPGESSARSGFSSLPDTPTPPAVRYLDFWDLGSGEEQAMARVESGR 360
           SSLWNVQVGSPVFGSPGESSARSGFSSLPDTPTPPAVRYLDFWDLG GEEQAMARVESGR
Sbjct: 301 SSLWNVQVGSPVFGSPGESSARSGFSSLPDTPTPPAVRYLDFWDLGCGEEQAMARVESGR 360

Query: 361 DLRAKMLEKLRKENSVACGDQEKPGGGSVDVGWISELLK 400
           DLRAKMLEKLRKENSVACGDQEKPGGGSVDVGWISELLK
Sbjct: 361 DLRAKMLEKLRKENSVACGDQEKPGGGSVDVGWISELLK 395

[Close]

BLAST of Carg18611 vs. ExPASy TrEMBL
Match: A0A6J1HL92 (zinc finger CCCH domain-containing protein 20-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465573 PE=4 SV=1)

HSP 1 Score: 799.3 bits (2063), Expect = 7.4e-228
Identity = 391/399 (97.99%), Postives = 392/399 (98.25%), Query Frame = 0


Query: 1   MMIDEQPNRPNQKLHVPPWTFMEDPASDGYSHSPGSGGSGSGSGSGSGSGVKCDGCSTGD 60
           MMIDEQPNRPNQKLHVPPW FMEDPASDGYSHSPGSG  GSGSGSGSGSGVKCDGCS+GD
Sbjct: 1   MMIDEQPNRPNQKLHVPPWAFMEDPASDGYSHSPGSG--GSGSGSGSGSGVKCDGCSSGD 60

Query: 61  GYSPFYLQEALAMLQQYLPSKEAEVESDLDASGREADSPVDTYSSDQFRMYEFKIKKCLR 120
           GYSPFYLQEALAMLQQYLPSKEAEVESDLD SGRE DSPVDTYSSDQFRMYEFKIKKCLR
Sbjct: 61  GYSPFYLQEALAMLQQYLPSKEAEVESDLDVSGREPDSPVDTYSSDQFRMYEFKIKKCLR 120

Query: 121 GRSHDWTECPFAHPGEKARRRDPRKYYYSGTACADFRKGNCNKGDACEFAHGVFECWLHP 180
           GRSHDWTECPFAHPGEKARRRDPRKYYYSGTACADFRKGNCNKGDACEFAHGVFECWLHP
Sbjct: 121 GRSHDWTECPFAHPGEKARRRDPRKYYYSGTACADFRKGNCNKGDACEFAHGVFECWLHP 180

Query: 181 ARYRTQPCKDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYDGSPLRQAIEACAKQ 240
           ARYRTQPCKDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYDGSPLRQAIEACAKQ
Sbjct: 181 ARYRTQPCKDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYDGSPLRQAIEACAKQ 240

Query: 241 MPYLSSSGTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQSP 300
           MPYLSSSGTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQSP
Sbjct: 241 MPYLSSSGTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQSP 300

Query: 301 SSLWNVQVGSPVFGSPGESSARSGFSSLPDTPTPPAVRYLDFWDLGSGEEQAMARVESGR 360
           SSLWNVQVGSPVFGSPGESSARSGF SLPDTPTPPAVRYLDFWDLG GEEQAMARVESGR
Sbjct: 301 SSLWNVQVGSPVFGSPGESSARSGFGSLPDTPTPPAVRYLDFWDLGCGEEQAMARVESGR 360

Query: 361 DLRAKMLEKLRKENSVACGDQEKPGGGSVDVGWISELLK 400
           DLRAKMLEKLRKENSVACGDQEKPGGGSVDVGWISELLK
Sbjct: 361 DLRAKMLEKLRKENSVACGDQEKPGGGSVDVGWISELLK 397

[Close]

BLAST of Carg18611 vs. ExPASy TrEMBL
Match: A0A6J1HQ03 (zinc finger CCCH domain-containing protein 20-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465573 PE=4 SV=1)

HSP 1 Score: 780.8 bits (2015), Expect = 2.7e-222
Identity = 380/399 (95.24%), Postives = 381/399 (95.49%), Query Frame = 0


Query: 1   MMIDEQPNRPNQKLHVPPWTFMEDPASDGYSHSPGSGGSGSGSGSGSGSGVKCDGCSTGD 60
           MMIDEQPNRPNQKLHVPPW FMEDPASDGYSHSP             GSGVKCDGCS+GD
Sbjct: 1   MMIDEQPNRPNQKLHVPPWAFMEDPASDGYSHSP-------------GSGVKCDGCSSGD 60

Query: 61  GYSPFYLQEALAMLQQYLPSKEAEVESDLDASGREADSPVDTYSSDQFRMYEFKIKKCLR 120
           GYSPFYLQEALAMLQQYLPSKEAEVESDLD SGRE DSPVDTYSSDQFRMYEFKIKKCLR
Sbjct: 61  GYSPFYLQEALAMLQQYLPSKEAEVESDLDVSGREPDSPVDTYSSDQFRMYEFKIKKCLR 120

Query: 121 GRSHDWTECPFAHPGEKARRRDPRKYYYSGTACADFRKGNCNKGDACEFAHGVFECWLHP 180
           GRSHDWTECPFAHPGEKARRRDPRKYYYSGTACADFRKGNCNKGDACEFAHGVFECWLHP
Sbjct: 121 GRSHDWTECPFAHPGEKARRRDPRKYYYSGTACADFRKGNCNKGDACEFAHGVFECWLHP 180

Query: 181 ARYRTQPCKDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYDGSPLRQAIEACAKQ 240
           ARYRTQPCKDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYDGSPLRQAIEACAKQ
Sbjct: 181 ARYRTQPCKDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYDGSPLRQAIEACAKQ 240

Query: 241 MPYLSSSGTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQSP 300
           MPYLSSSGTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQSP
Sbjct: 241 MPYLSSSGTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQSP 300

Query: 301 SSLWNVQVGSPVFGSPGESSARSGFSSLPDTPTPPAVRYLDFWDLGSGEEQAMARVESGR 360
           SSLWNVQVGSPVFGSPGESSARSGF SLPDTPTPPAVRYLDFWDLG GEEQAMARVESGR
Sbjct: 301 SSLWNVQVGSPVFGSPGESSARSGFGSLPDTPTPPAVRYLDFWDLGCGEEQAMARVESGR 360

Query: 361 DLRAKMLEKLRKENSVACGDQEKPGGGSVDVGWISELLK 400
           DLRAKMLEKLRKENSVACGDQEKPGGGSVDVGWISELLK
Sbjct: 361 DLRAKMLEKLRKENSVACGDQEKPGGGSVDVGWISELLK 386

[Close]

BLAST of Carg18611 vs. ExPASy TrEMBL
Match: A0A5A7V3Q9 (Zinc finger CCCH domain-containing protein 20-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G00680 PE=4 SV=1)

HSP 1 Score: 660.6 bits (1703), Expect = 4.1e-186
Identity = 325/404 (80.45%), Postives = 355/404 (87.87%), Query Frame = 0


Query: 1   MMIDEQPNRPNQKLHVPPWTFMEDPASDGYSH-SPGSGGSGSGSGSGSGSGVKCDGCSTG 60
           M++ EQP R N  + +PPWTF+ED   D YSH SPGSGGS       SGS VKCDGCS+G
Sbjct: 1   MIVGEQPKRTNPTVQIPPWTFLEDAGMDVYSHSSPGSGGS-------SGS-VKCDGCSSG 60

Query: 61  DGYSPFYLQEALAMLQQYLPSKEAEVESDLDASGREADSPVDTYSSDQFRMYEFKIKKCL 120
            GYSP+YLQEALAML++YLPS EAE++SD+D SG+E DSPVD YSSDQFRMYEFKIKKC 
Sbjct: 61  GGYSPYYLQEALAMLKRYLPSNEAEMDSDIDVSGKEMDSPVDAYSSDQFRMYEFKIKKCT 120

Query: 121 RGRSHDWTECPFAHPGEKARRRDPRKYYYSGTACADFRKGNCNKGDACEFAHGVFECWLH 180
           RGRSHDWTECPFAHPGEKARRRDPR+YYYSGTACADFRKG+C KGDACEFAHGVFECWLH
Sbjct: 121 RGRSHDWTECPFAHPGEKARRRDPRRYYYSGTACADFRKGSCVKGDACEFAHGVFECWLH 180

Query: 181 PARYRTQPCKDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYDGSPLRQAIEACAK 240
           PARYRTQPCKDGTSCRRRVCFFAHTPEQLR+LPQQSPRST+SIPSYDGSPLRQAIEACAK
Sbjct: 181 PARYRTQPCKDGTSCRRRVCFFAHTPEQLRVLPQQSPRSTTSIPSYDGSPLRQAIEACAK 240

Query: 241 QMPYLSSSGTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQS 300
           QMPYLSS GTS PVSPRIESPPQSP+ +SLNRPHA SSINEM+ASLR+LQL+KEL KVQS
Sbjct: 241 QMPYLSSPGTSPPVSPRIESPPQSPIIKSLNRPHAPSSINEMIASLRNLQLNKELCKVQS 300

Query: 301 P--SSLWNVQVGSPVFGSPGESSARSGFSSLPDTPTPPAVRYLDFWDLGSGEEQAMARVE 360
           P  SS WNVQVGSPVFGSP +S+ RSG  SLP+T TPP +RYLDFW+LG GEE AM RVE
Sbjct: 301 PSSSSSWNVQVGSPVFGSPKDSTTRSGLPSLPETSTPPGIRYLDFWELGIGEEPAMERVE 360

Query: 361 SGRDLRAKMLEKLRKENSVACGDQEKPGGGS--VDVGWISELLK 400
           SGRDLRAKM EKLRKENSV CGDQ+K  GG+  +DVGWISELLK
Sbjct: 361 SGRDLRAKMFEKLRKENSVGCGDQDKNSGGAGGLDVGWISELLK 396

[Close]

BLAST of Carg18611 vs. ExPASy TrEMBL
Match: A0A1S3C9K7 (zinc finger CCCH domain-containing protein 20-like OS=Cucumis melo OX=3656 GN=LOC103498342 PE=4 SV=1)

HSP 1 Score: 660.6 bits (1703), Expect = 4.1e-186
Identity = 325/404 (80.45%), Postives = 355/404 (87.87%), Query Frame = 0


Query: 1   MMIDEQPNRPNQKLHVPPWTFMEDPASDGYSH-SPGSGGSGSGSGSGSGSGVKCDGCSTG 60
           M++ EQP R N  + +PPWTF+ED   D YSH SPGSGGS       SGS VKCDGCS+G
Sbjct: 1   MIVGEQPKRTNPTVQIPPWTFLEDTGMDVYSHSSPGSGGS-------SGS-VKCDGCSSG 60

Query: 61  DGYSPFYLQEALAMLQQYLPSKEAEVESDLDASGREADSPVDTYSSDQFRMYEFKIKKCL 120
            GYSP+YLQEALAML++YLPS EAE++SD+D SG+E DSPVD YSSDQFRMYEFKIKKC 
Sbjct: 61  GGYSPYYLQEALAMLKRYLPSNEAEMDSDIDVSGKEMDSPVDAYSSDQFRMYEFKIKKCT 120

Query: 121 RGRSHDWTECPFAHPGEKARRRDPRKYYYSGTACADFRKGNCNKGDACEFAHGVFECWLH 180
           RGRSHDWTECPFAHPGEKARRRDPR+YYYSGTACADFRKG+C KGDACEFAHGVFECWLH
Sbjct: 121 RGRSHDWTECPFAHPGEKARRRDPRRYYYSGTACADFRKGSCVKGDACEFAHGVFECWLH 180

Query: 181 PARYRTQPCKDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYDGSPLRQAIEACAK 240
           PARYRTQPCKDGTSCRRRVCFFAHTPEQLR+LPQQSPRST+SIPSYDGSPLRQAIEACAK
Sbjct: 181 PARYRTQPCKDGTSCRRRVCFFAHTPEQLRVLPQQSPRSTTSIPSYDGSPLRQAIEACAK 240

Query: 241 QMPYLSSSGTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQS 300
           QMPYLSS GTS PVSPRIESPPQSP+ +SLNRPHA SSINEM+ASLR+LQL+KEL KVQS
Sbjct: 241 QMPYLSSPGTSPPVSPRIESPPQSPIIKSLNRPHAPSSINEMIASLRNLQLNKELCKVQS 300

Query: 301 P--SSLWNVQVGSPVFGSPGESSARSGFSSLPDTPTPPAVRYLDFWDLGSGEEQAMARVE 360
           P  SS WNVQVGSPVFGSP +S+ RSG  SLP+T TPP +RYLDFW+LG GEE AM RVE
Sbjct: 301 PSSSSSWNVQVGSPVFGSPKDSTTRSGLPSLPETSTPPGIRYLDFWELGIGEEPAMERVE 360

Query: 361 SGRDLRAKMLEKLRKENSVACGDQEKPGGGS--VDVGWISELLK 400
           SGRDLRAKM EKLRKENSV CGDQ+K  GG+  +DVGWISELLK
Sbjct: 361 SGRDLRAKMFEKLRKENSVGCGDQDKNSGGAGGLDVGWISELLK 396

[Close]

BLAST of Carg18611 vs. TAIR 10
Match: AT2G19810.1 (CCCH-type zinc finger family protein )

HSP 1 Score: 355.1 bits (910), Expect = 7.1e-98
Identity = 200/404 (49.50%), Postives = 253/404 (62.62%), Query Frame = 0


Query: 1   MMIDEQPNRPNQKLHVPPWTFMEDPASDGYSHSPGSGGSGSGSGSGSGSGVKCDGCSTGD 60
           MMI E     N  +H+PPW   ED        SP  G S                     
Sbjct: 1   MMIGESHRGFNPTVHIPPWPLSEDLTVSDIYGSPDGGSS--------------------- 60

Query: 61  GYSPFYLQEALAMLQQYLPSKEAEVESDLDASGREADSPVDTYSSDQFRMYEFKIKKCLR 120
                 + EALA LQ+YLPS E + +SD D SG   DSP+D Y+ D FRMYEFK+++C R
Sbjct: 61  ------MMEALAELQRYLPSNEPDPDSDPDLSG--PDSPIDAYTCDHFRMYEFKVRRCAR 120

Query: 121 GRSHDWTECPFAHPGEKARRRDPRKYYYSGTACADFRKGNCNKGDACEFAHGVFECWLHP 180
           GRSHDWTECP+AHPGEKARRRDPRK++YSGTAC +FRKG C +GDACEF+HGVFECWLHP
Sbjct: 121 GRSHDWTECPYAHPGEKARRRDPRKFHYSGTACPEFRKGCCKRGDACEFSHGVFECWLHP 180

Query: 181 ARYRTQPCKDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYD--GSPLRQAIEACA 240
           ARYRTQPCKDG +CRRRVCFFAH+P+Q+R+LP QSP     + S+D     +R+A +   
Sbjct: 181 ARYRTQPCKDGGNCRRRVCFFAHSPDQIRVLPNQSP---DRVDSFDVLSPTIRRAFQFS- 240

Query: 241 KQMPYLSSSGTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQ 300
                +S S  S PVSPR +S     +   L+R   ++  N++VASLR+LQL+K      
Sbjct: 241 -----ISPSSNSPPVSPRGDSDSSCSL---LSRSLGSNLGNDVVASLRNLQLNK---VKS 300

Query: 301 SPSSLWNVQVG--SPVFGSPGESSARSGFSSLPDTPTPPAVRYLDFWDLGSGEEQAMARV 360
           S SS +N Q+G     FGSP  S    GF SLP TPT P   +++ W+ G  EE AM RV
Sbjct: 301 SLSSSYNNQIGGYGSGFGSPRGSVLGPGFRSLPTTPTRPG--FMNIWENGLEEEPAMERV 358

Query: 361 ESGRDLRAKMLEKLRKENSVAC--GDQEKPGGGSVDVGWISELL 399
           ESGR+LRA++ EKL KEN +     D ++  G + DVGW+S+L+
Sbjct: 361 ESGRELRAQLFEKLSKENCMGRIEPDPDQGAGDTPDVGWVSDLV 358

[Close]

BLAST of Carg18611 vs. TAIR 10
Match: AT4G29190.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 334.7 bits (857), Expect = 1.0e-91
Identity = 187/336 (55.65%), Postives = 228/336 (67.86%), Query Frame = 0


Query: 69  EALAMLQQYLPSKEAEVESDLDASGREADSPVDTYSSDQFRMYEFKIKKCLRGRSHDWTE 128
           EALA LQ+YLPS E + ES  D  G   DSP+D YS D FRMY+FK+++C RGRSHDWTE
Sbjct: 43  EALAGLQRYLPSNEPDPESYPDLLG--PDSPIDAYSCDHFRMYDFKVRRCARGRSHDWTE 102

Query: 129 CPFAHPGEKARRRDPRKYYYSGTACADFRKGNCNKGDACEFAHGVFECWLHPARYRTQPC 188
           CP+AHPGEKARRRDPRKY+YSGTAC DFRKG C KGD+CEFAHGVFECWLHPARYRTQPC
Sbjct: 103 CPYAHPGEKARRRDPRKYHYSGTACPDFRKGGCKKGDSCEFAHGVFECWLHPARYRTQPC 162

Query: 189 KDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYD-GSPLRQAIEACAKQMPYLSSS 248
           KDG +C R++CFFAH+P+QLR L  +SP     + S+D  SP+R    A A Q+     S
Sbjct: 163 KDGGNCLRKICFFAHSPDQLRFLHTRSP---DRVDSFDVSSPIR----ARAFQLSISPVS 222

Query: 249 GTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQSPSSLWNVQ 308
           G S P+SPR +S   SPM +SL+R   + SIN++V S R+LQ           +S+ +  
Sbjct: 223 G-SPPMSPRADS-ESSPMTQSLSRSLGSCSINDVVPSFRNLQF----------NSVKSFP 282

Query: 309 VGSPV--FGSPGESSARSGFSSLPDTPTPPAVRYLDFWDLGSGEEQAMAR-VESGRDLRA 368
             +P+  FGSP  S    GF SLP TPT P    LD W+ G  EE  M R VESGR+LR 
Sbjct: 283 RNNPLFGFGSPRGSILGPGFQSLPTTPTRPG--NLDIWEYGLEEEPVMERVVESGRELRE 342

Query: 369 KMLEKLRKENSV--ACGDQEKPGGGSVDVGWISELL 399
           KM EKL KEN +     D ++  G + DVGW+S+LL
Sbjct: 343 KMREKLHKENCMDRVAQDPDQNLGEAPDVGWVSDLL 355

[Close]

BLAST of Carg18611 vs. TAIR 10
Match: AT2G25900.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 273.9 bits (699), Expect = 2.1e-73
Identity = 168/380 (44.21%), Postives = 214/380 (56.32%), Query Frame = 0


Query: 1   MMIDEQPNRPNQKLHVPPWTFMEDPASDGYSHSPGSGGSGSGSGSGSGSGVKCDGCSTGD 60
           MMI E  NRP+  +H+P W  + DP               + + S   S V  +  S  D
Sbjct: 1   MMIGENKNRPHPTIHIPQWDQINDP---------------TATISSPFSSVNLN--SVND 60

Query: 61  -GYSPFYLQEALAMLQQYLPSKEAEVESDLDASGREADSPVDTYSSDQFRMYEFKIKKCL 120
             +SP    ++ A L +YLPS E   +SD  +SG E+    D++SSD+FR+YEFKI++C 
Sbjct: 61  YPHSPSPYLDSFASLFRYLPSNELTNDSD-SSSGDESSPLTDSFSSDEFRIYEFKIRRCA 120

Query: 121 RGRSHDWTECPFAHPGEKARRRDPRKYYYSGTACADFRKGNCNKGDACEFAHGVFECWLH 180
           RGRSHDWTECPFAHPGEKARRRDPRK++YSGTAC +FRKG+C +GD+CEF+HGVFECWLH
Sbjct: 121 RGRSHDWTECPFAHPGEKARRRDPRKFHYSGTACPEFRKGSCRRGDSCEFSHGVFECWLH 180

Query: 181 PARYRTQPCKDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYDGSPLRQAIEACAK 240
           P+RYRTQPCKDGTSCRRR+CFFAHT EQLR+LP               SP          
Sbjct: 181 PSRYRTQPCKDGTSCRRRICFFAHTTEQLRVLPCSLDPDLGFFSGLATSP---------- 240

Query: 241 QMPYLSSSGTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQS 300
                +S   S   SP  ESPP SP            S  E++AS+R +QL+        
Sbjct: 241 -----TSILVSPSFSPPSESPPLSP------------STGELIASMRKMQLNG------- 300

Query: 301 PSSLWNVQVGSPVFGSPGESSARSGFSSL---PDTPTPPAVRYLDFWDLGSGEEQAMARV 360
                    G   + SP  S+ R  FSS        T P +R  +       E  AM  V
Sbjct: 301 ---------GGCSWSSPMRSAVRLPFSSSLRPIQAATWPRIREFEI-----EEAPAMEFV 314

Query: 361 ESGRDLRAKMLEKLRKENSV 377
           ESG++LRA+M  +L +ENS+
Sbjct: 361 ESGKELRAEMYARLSRENSL 314

[Close]

BLAST of Carg18611 vs. TAIR 10
Match: AT2G25900.2 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 273.9 bits (699), Expect = 2.1e-73
Identity = 168/380 (44.21%), Postives = 214/380 (56.32%), Query Frame = 0


Query: 1   MMIDEQPNRPNQKLHVPPWTFMEDPASDGYSHSPGSGGSGSGSGSGSGSGVKCDGCSTGD 60
           MMI E  NRP+  +H+P W  + DP               + + S   S V  +  S  D
Sbjct: 1   MMIGENKNRPHPTIHIPQWDQINDP---------------TATISSPFSSVNLN--SVND 60

Query: 61  -GYSPFYLQEALAMLQQYLPSKEAEVESDLDASGREADSPVDTYSSDQFRMYEFKIKKCL 120
             +SP    ++ A L +YLPS E   +SD  +SG E+    D++SSD+FR+YEFKI++C 
Sbjct: 61  YPHSPSPYLDSFASLFRYLPSNELTNDSD-SSSGDESSPLTDSFSSDEFRIYEFKIRRCA 120

Query: 121 RGRSHDWTECPFAHPGEKARRRDPRKYYYSGTACADFRKGNCNKGDACEFAHGVFECWLH 180
           RGRSHDWTECPFAHPGEKARRRDPRK++YSGTAC +FRKG+C +GD+CEF+HGVFECWLH
Sbjct: 121 RGRSHDWTECPFAHPGEKARRRDPRKFHYSGTACPEFRKGSCRRGDSCEFSHGVFECWLH 180

Query: 181 PARYRTQPCKDGTSCRRRVCFFAHTPEQLRILPQQSPRSTSSIPSYDGSPLRQAIEACAK 240
           P+RYRTQPCKDGTSCRRR+CFFAHT EQLR+LP               SP          
Sbjct: 181 PSRYRTQPCKDGTSCRRRICFFAHTTEQLRVLPCSLDPDLGFFSGLATSP---------- 240

Query: 241 QMPYLSSSGTSTPVSPRIESPPQSPMFRSLNRPHATSSINEMVASLRSLQLHKELGKVQS 300
                +S   S   SP  ESPP SP            S  E++AS+R +QL+        
Sbjct: 241 -----TSILVSPSFSPPSESPPLSP------------STGELIASMRKMQLNG------- 300

Query: 301 PSSLWNVQVGSPVFGSPGESSARSGFSSL---PDTPTPPAVRYLDFWDLGSGEEQAMARV 360
                    G   + SP  S+ R  FSS        T P +R  +       E  AM  V
Sbjct: 301 ---------GGCSWSSPMRSAVRLPFSSSLRPIQAATWPRIREFEI-----EEAPAMEFV 314

Query: 361 ESGRDLRAKMLEKLRKENSV 377
           ESG++LRA+M  +L +ENS+
Sbjct: 361 ESGKELRAEMYARLSRENSL 314

[Close]

BLAST of Carg18611 vs. TAIR 10
Match: AT1G03790.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 207.6 bits (527), Expect = 1.8e-53
Identity = 110/213 (51.64%), Postives = 137/213 (64.32%), Query Frame = 0


Query: 83  AEVESDLDASGRE-------ADSPVDTYSSDQFRMYEFKIKKCLRGRSHDWTECPFAHPG 142
           +E E D + + RE       +DS  D Y+SD FRM+EFKI++C R RSHDWT+CPFAHPG
Sbjct: 52  SEHEEDNEDNNRENKEYCYDSDSD-DPYASDHFRMFEFKIRRCTRSRSHDWTDCPFAHPG 111

Query: 143 EKARRRDPRKYYYSGTACADFRK-GNCNKGDACEFAHGVFECWLHPARYRTQPCKDGTSC 202
           EKARRRDPR++ YSG  C +FR+ G+C++GD CEFAHGVFECWLHP RYRT+ CKDG  C
Sbjct: 112 EKARRRDPRRFQYSGEVCPEFRRGGDCSRGDDCEFAHGVFECWLHPIRYRTEACKDGKHC 171

Query: 203 RRRVCFFAHTPEQLRILPQQSPRSTSSIPSYDGSPLRQAIEACAKQMPYLSSSGTST--- 262
           +R+VCFFAH+P QLR+LP   P + S +     SP   A   C     + SSS TST   
Sbjct: 172 KRKVCFFAHSPRQLRVLP---PENVSGV---SASPSPAAKNPCCL---FCSSSPTSTLLG 231

Query: 263 PVSPRIESPPQSPMFRSLNRPHATSSINEMVAS 285
            +S    SP  SP     N+  A S +    AS
Sbjct: 232 NLSHLSRSPSLSPPMSPANKAAAFSRLRNRAAS 254

The following BLAST results are available for this feature:

BLAST of Carg18611 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6586463.1	5.5e-233	100.00	Zinc finger CCCH domain-containing protein 20, partial [Cucurbita argyrosperma s...	[more]
XP_023536933.1	1.3e-229	99.00	zinc finger CCCH domain-containing protein 20-like [Cucurbita pepo subsp. pepo]	[more]
XP_022937473.1	2.4e-228	98.50	zinc finger CCCH domain-containing protein 20-like [Cucurbita moschata]	[more]
XP_022965787.1	1.5e-227	97.99	zinc finger CCCH domain-containing protein 20-like isoform X1 [Cucurbita maxima]	[more]
XP_022965788.1	5.7e-222	95.24	zinc finger CCCH domain-containing protein 20-like isoform X2 [Cucurbita maxima]	[more]

BLAST of Carg18611 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82199	1.0e-96	49.50	Zinc finger CCCH domain-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9M0G2	1.4e-90	55.65	Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9FU27	3.1e-90	48.77	Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=...	[more]
Q6L4N4	5.4e-82	46.56	Zinc finger CCCH domain-containing protein 35 OS=Oryza sativa subsp. japonica OX...	[more]
O82307	2.9e-72	44.21	Zinc finger CCCH domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Carg18611 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FG51	1.1e-228	98.50	zinc finger CCCH domain-containing protein 20-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1HL92	7.4e-228	97.99	zinc finger CCCH domain-containing protein 20-like isoform X1 OS=Cucurbita maxim...	[more]
A0A6J1HQ03	2.7e-222	95.24	zinc finger CCCH domain-containing protein 20-like isoform X2 OS=Cucurbita maxim...	[more]
A0A5A7V3Q9	4.1e-186	80.45	Zinc finger CCCH domain-containing protein 20-like OS=Cucumis melo var. makuwa O...	[more]
A0A1S3C9K7	4.1e-186	80.45	zinc finger CCCH domain-containing protein 20-like OS=Cucumis melo OX=3656 GN=LO...	[more]

BLAST of Carg18611 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19810.1	7.1e-98	49.50	CCCH-type zinc finger family protein	[more]
AT4G29190.1	1.0e-91	55.65	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT2G25900.1	2.1e-73	44.21	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT2G25900.2	2.1e-73	44.21	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G03790.1	1.8e-53	51.64	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 147..173 e-value: 4.1E-4 score: 29.7 coord: 182..205 e-value: 14.0 score: 7.1
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 152..172 e-value: 4.5E-5 score: 23.2
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 147..174 score: 12.93405
None	No IPR available	GENE3D	3.30.1370.210		coord: 147..210 e-value: 1.1E-8 score: 37.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 245..264
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..52
None	No IPR available	PANTHER	PTHR14493	UNKEMPT FAMILY MEMBER	coord: 10..398
None	No IPR available	PANTHER	PTHR14493:SF116	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 20	coord: 10..398

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18611-RA	Carg18611-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding