Carg18448 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18448
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	expansin-B3-like
Location	Carg_Chr20: 913776 .. 915192 (-)
RNA-Seq Expression	Carg18448
Synteny	Carg18448

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATCTCCTCCTCCACTGCCGTGGTTTTCGGCTCGTTAGAGCTTTGTTCTGTGCTGCGGCTGTGCTTGAGTGGTTCACGGCGACGGCTCAGCTCCAACACCATGTGGCGGATCTACATTGGCTTCCAGCCACCGCCACGTGGTACGGAAGTCCCGAGGGAGACGGTAGCGACGGTACGGCGGTTCCATTTCCCTACACTTCATTTTTTTTTTTTCGTTTTGGGCTTATTAGGGTCTGTAAATTCATGGGTCGGCTCTGTTTTTGTGAAATACTGCCTGGAAGTTACCGTCATTGAGTGAATTCGGTAAAAAATTGATTATATGCGGGTGAATTAACTAAAACCCAGTTCATAAATCACTTAAACCAACCGTAATTTCACCATTTTGAAGTTCATTGCTGCTAGAAATTAAGCGATCTGAGCTGTGAAATCGCAGGTGGAGCATGTGGGTATGGTAATTTAGTGGATGTGAAGCCTCTAAAGGCAAGAGTTGGGGCTGTGAGTCCAGTTCTGTTCAGAAATGGCGAAGGTTGTGGAGCTTGTTACAAAGTAAAGTGTTTAGACAACAACATTTGCTCTAGACGAGCAGTGACTATAATCGTCACCGACGAATGCCCCGGTGGGTATTGTTCCAATGGAAACACCCACTTCGATCTGAGCGGCGCCGCCTTCGGCCGCATGGCCATCACCGGCGAAGGTGGGCAGCTCAGAAACCGAGGCGAAATCCCAGTTATTTACCGACGGTACAAATTCCTTCCAACTCTGTTTCATTTTTTTATCCCTGCTTTTCTATTTTGTCGCTTATTTTTGGATGTTCTAAATGTGTAGGACGCCGTGTAAGTACCCAGGCAAGCACATTGCGTTCCATGTCAATGAAGGGTCGACAGATTACTGGCTCTCACTCTTGGTTGAATTCGAGGACGGCGATGGCGACATCGGCGCAATGCAAATCAAAGAAGTAAGTAAAAAACAAACAAACTTGGTACTGATGGGGCTTTCTGAAGCATATTCCATTGCTTTAATCACAATAATTTAAGGCGAAAAAGATAGAAAAGCTGGGTGTTTTAGAGGGCGTGGTGCTTAATTACACGTTGAAAGTTGAATCCCAGTGGAAGAATCTTTAGAAGAAAAAGCATGCACTTAGCCACATGATTATAAAAGAATTGTGGGTGACTAAACATGATATTGACCAAAGGAAATGCATGTTTTGTGGCAGGCAGGGTCGGCGGGGGAGTGGGTGGATATGAACCATCTGTGGGGGGCAAATTGGTGCATCATTGGAGGGCCTTTAAAGGGGCCATTCTCAGTGAGACTAACAACGTTGTCGACAGGAAGAAGCCTCTCAGCAAGGGATATAATCCCAAGGAACTGGTCTCCCAAAGCCACTTACACTTCCAGACTTAATTTCTTCTCTTAA

mRNA sequence

ATGCATCTCCTCCTCCACTGCCGTGGTTTTCGGCTCGTTAGAGCTTTGTTCTGTGCTGCGGCTGTGCTTGAGTGGTTCACGGCGACGGCTCAGCTCCAACACCATGTGGCGGATCTACATTGGCTTCCAGCCACCGCCACGTGGTACGGAAGTCCCGAGGGAGACGGTAGCGACGGTGGAGCATGTGGGTATGGTAATTTAGTGGATGTGAAGCCTCTAAAGGCAAGAGTTGGGGCTGTGAGTCCAGTTCTGTTCAGAAATGGCGAAGGTTGTGGAGCTTGTTACAAAGTAAAGTGTTTAGACAACAACATTTGCTCTAGACGAGCAGTGACTATAATCGTCACCGACGAATGCCCCGGTGGGTATTGTTCCAATGGAAACACCCACTTCGATCTGAGCGGCGCCGCCTTCGGCCGCATGGCCATCACCGGCGAAGGTGGGCAGCTCAGAAACCGAGGCGAAATCCCAGTTATTTACCGACGGACGCCGTGTAAGTACCCAGGCAAGCACATTGCGTTCCATGTCAATGAAGGGTCGACAGATTACTGGCTCTCACTCTTGGTTGAATTCGAGGACGGCGATGGCGACATCGGCGCAATGCAAATCAAAGAAGCAGGGTCGGCGGGGGAGTGGGTGGATATGAACCATCTGTGGGGGGCAAATTGGTGCATCATTGGAGGGCCTTTAAAGGGGCCATTCTCAGTGAGACTAACAACGTTGTCGACAGGAAGAAGCCTCTCAGCAAGGGATATAATCCCAAGGAACTGGTCTCCCAAAGCCACTTACACTTCCAGACTTAATTTCTTCTCTTAA

Coding sequence (CDS)

ATGCATCTCCTCCTCCACTGCCGTGGTTTTCGGCTCGTTAGAGCTTTGTTCTGTGCTGCGGCTGTGCTTGAGTGGTTCACGGCGACGGCTCAGCTCCAACACCATGTGGCGGATCTACATTGGCTTCCAGCCACCGCCACGTGGTACGGAAGTCCCGAGGGAGACGGTAGCGACGGTGGAGCATGTGGGTATGGTAATTTAGTGGATGTGAAGCCTCTAAAGGCAAGAGTTGGGGCTGTGAGTCCAGTTCTGTTCAGAAATGGCGAAGGTTGTGGAGCTTGTTACAAAGTAAAGTGTTTAGACAACAACATTTGCTCTAGACGAGCAGTGACTATAATCGTCACCGACGAATGCCCCGGTGGGTATTGTTCCAATGGAAACACCCACTTCGATCTGAGCGGCGCCGCCTTCGGCCGCATGGCCATCACCGGCGAAGGTGGGCAGCTCAGAAACCGAGGCGAAATCCCAGTTATTTACCGACGGACGCCGTGTAAGTACCCAGGCAAGCACATTGCGTTCCATGTCAATGAAGGGTCGACAGATTACTGGCTCTCACTCTTGGTTGAATTCGAGGACGGCGATGGCGACATCGGCGCAATGCAAATCAAAGAAGCAGGGTCGGCGGGGGAGTGGGTGGATATGAACCATCTGTGGGGGGCAAATTGGTGCATCATTGGAGGGCCTTTAAAGGGGCCATTCTCAGTGAGACTAACAACGTTGTCGACAGGAAGAAGCCTCTCAGCAAGGGATATAATCCCAAGGAACTGGTCTCCCAAAGCCACTTACACTTCCAGACTTAATTTCTTCTCTTAA

Protein sequence

MHLLLHCRGFRLVRALFCAAAVLEWFTATAQLQHHVADLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDNNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKEAGSAGEWVDMNHLWGANWCIIGGPLKGPFSVRLTTLSTGRSLSARDIIPRNWSPKATYTSRLNFFS

Homology

[Close]

BLAST of Carg18448 vs. NCBI nr
Match: XP_023512091.1 (expansin-B3-like [Cucurbita pepo subsp. pepo] >KAG7010368.1 Expansin-B3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 578.9 bits (1491), Expect = 2.2e-161
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0


Query: 1   MHLLLHCRGFRLVRALFCAAAVLEWFTATAQLQHHVADLHWLPATATWYGSPEGDGSDGG 60
           MHLLLHCRGFRLVRALFCAAAVLEWFTATAQLQHHVADLHWLPATATWYGSPEGDGSDGG
Sbjct: 1   MHLLLHCRGFRLVRALFCAAAVLEWFTATAQLQHHVADLHWLPATATWYGSPEGDGSDGG 60

Query: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDNNICSRRAVTIIVTDECPG 120
           ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDNNICSRRAVTIIVTDECPG
Sbjct: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDNNICSRRAVTIIVTDECPG 120

Query: 121 GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGST 180
           GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGST
Sbjct: 121 GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGST 180

Query: 181 DYWLSLLVEFEDGDGDIGAMQIKEAGSAGEWVDMNHLWGANWCIIGGPLKGPFSVRLTTL 240
           DYWLSLLVEFEDGDGDIGAMQIKEAGSAGEWVDMNHLWGANWCIIGGPLKGPFSVRLTTL
Sbjct: 181 DYWLSLLVEFEDGDGDIGAMQIKEAGSAGEWVDMNHLWGANWCIIGGPLKGPFSVRLTTL 240

Query: 241 STGRSLSARDIIPRNWSPKATYTSRLNFFS 271
           STGRSLSARDIIPRNWSPKATYTSRLNFFS
Sbjct: 241 STGRSLSARDIIPRNWSPKATYTSRLNFFS 270

[Close]

BLAST of Carg18448 vs. NCBI nr
Match: KAG6570506.1 (Expansin-B3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 578.9 bits (1491), Expect = 2.2e-161
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0


Query: 1   MHLLLHCRGFRLVRALFCAAAVLEWFTATAQLQHHVADLHWLPATATWYGSPEGDGSDGG 60
           MHLLLHCRGFRLVRALFCAAAVLEWFTATAQLQHHVADLHWLPATATWYGSPEGDGSDGG
Sbjct: 131 MHLLLHCRGFRLVRALFCAAAVLEWFTATAQLQHHVADLHWLPATATWYGSPEGDGSDGG 190

Query: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDNNICSRRAVTIIVTDECPG 120
           ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDNNICSRRAVTIIVTDECPG
Sbjct: 191 ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDNNICSRRAVTIIVTDECPG 250

Query: 121 GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGST 180
           GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGST
Sbjct: 251 GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGST 310

Query: 181 DYWLSLLVEFEDGDGDIGAMQIKEAGSAGEWVDMNHLWGANWCIIGGPLKGPFSVRLTTL 240
           DYWLSLLVEFEDGDGDIGAMQIKEAGSAGEWVDMNHLWGANWCIIGGPLKGPFSVRLTTL
Sbjct: 311 DYWLSLLVEFEDGDGDIGAMQIKEAGSAGEWVDMNHLWGANWCIIGGPLKGPFSVRLTTL 370

Query: 241 STGRSLSARDIIPRNWSPKATYTSRLNFFS 271
           STGRSLSARDIIPRNWSPKATYTSRLNFFS
Sbjct: 371 STGRSLSARDIIPRNWSPKATYTSRLNFFS 400

[Close]

BLAST of Carg18448 vs. NCBI nr
Match: XP_022943728.1 (expansin-B3-like [Cucurbita moschata])

HSP 1 Score: 574.3 bits (1479), Expect = 5.4e-160
Identity = 267/270 (98.89%), Postives = 269/270 (99.63%), Query Frame = 0


Query: 1   MHLLLHCRGFRLVRALFCAAAVLEWFTATAQLQHHVADLHWLPATATWYGSPEGDGSDGG 60
           MHLLLHCRGFR+VRALFCAAAVLEWF+ATAQLQHHVADLHWLPATATWYGSPEGDGSDGG
Sbjct: 5   MHLLLHCRGFRIVRALFCAAAVLEWFSATAQLQHHVADLHWLPATATWYGSPEGDGSDGG 64

Query: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDNNICSRRAVTIIVTDECPG 120
           ACGYGN VDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDNNICSRRAVTIIVTDECPG
Sbjct: 65  ACGYGNSVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDNNICSRRAVTIIVTDECPG 124

Query: 121 GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGST 180
           GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGST
Sbjct: 125 GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGST 184

Query: 181 DYWLSLLVEFEDGDGDIGAMQIKEAGSAGEWVDMNHLWGANWCIIGGPLKGPFSVRLTTL 240
           DYWLSLLVEFEDGDGDIGAMQIKEAGSAGEWVDMNHLWGANWCIIGGPLKGPFSVRLTTL
Sbjct: 185 DYWLSLLVEFEDGDGDIGAMQIKEAGSAGEWVDMNHLWGANWCIIGGPLKGPFSVRLTTL 244

Query: 241 STGRSLSARDIIPRNWSPKATYTSRLNFFS 271
           STGRSLSARDIIPRNWSPKATYTSRLNFFS
Sbjct: 245 STGRSLSARDIIPRNWSPKATYTSRLNFFS 274

[Close]

BLAST of Carg18448 vs. NCBI nr
Match: XP_022986016.1 (expansin-B3-like [Cucurbita maxima])

HSP 1 Score: 572.8 bits (1475), Expect = 1.6e-159
Identity = 269/270 (99.63%), Postives = 269/270 (99.63%), Query Frame = 0


Query: 1   MHLLLHCRGFRLVRALFCAAAVLEWFTATAQLQHHVADLHWLPATATWYGSPEGDGSDGG 60
           MHLLLHCRGFRLVRALFCAAAVLEWFTATAQLQHHVADLHWLPATATWYGSPEGDGSDGG
Sbjct: 1   MHLLLHCRGFRLVRALFCAAAVLEWFTATAQLQHHVADLHWLPATATWYGSPEGDGSDGG 60

Query: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDNNICSRRAVTIIVTDECPG 120
           ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDNNICSRRAVTIIVTDECPG
Sbjct: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDNNICSRRAVTIIVTDECPG 120

Query: 121 GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGST 180
           GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGST
Sbjct: 121 GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGST 180

Query: 181 DYWLSLLVEFEDGDGDIGAMQIKEAGSAGEWVDMNHLWGANWCIIGGPLKGPFSVRLTTL 240
           DYWLSLLVEFEDGDGDIGAMQIKEAGS GEWVDMNHLWGANWCIIGGPLKGPFSVRLTTL
Sbjct: 181 DYWLSLLVEFEDGDGDIGAMQIKEAGS-GEWVDMNHLWGANWCIIGGPLKGPFSVRLTTL 240

Query: 241 STGRSLSARDIIPRNWSPKATYTSRLNFFS 271
           STGRSLSARDIIPRNWSPKATYTSRLNFFS
Sbjct: 241 STGRSLSARDIIPRNWSPKATYTSRLNFFS 269

[Close]

BLAST of Carg18448 vs. NCBI nr
Match: XP_038901858.1 (expansin-B3-like [Benincasa hispida])

HSP 1 Score: 530.8 bits (1366), Expect = 6.9e-147
Identity = 249/270 (92.22%), Postives = 256/270 (94.81%), Query Frame = 0


Query: 1   MHLLLHCRGFRLVRALFCAAAVLEWFTATAQLQHHVADLHWLPATATWYGSPEGDGSDGG 60
           M LLL    FRL+RALFCA A+L+WFTA AQLQH V +LHWLPATATWYGSPEGDGSDGG
Sbjct: 1   MQLLLPRHSFRLIRALFCATALLQWFTAAAQLQHRVPNLHWLPATATWYGSPEGDGSDGG 60

Query: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDNNICSRRAVTIIVTDECPG 120
           ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLD NICSRRAVTIIVTDECPG
Sbjct: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDQNICSRRAVTIIVTDECPG 120

Query: 121 GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGST 180
           GYCSNGNTHFDLSGAAFGRMAI GEGGQLRNRGEIPVIYRRTPCKYPGK+IAFHVNEGST
Sbjct: 121 GYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180

Query: 181 DYWLSLLVEFEDGDGDIGAMQIKEAGSAGEWVDMNHLWGANWCIIGGPLKGPFSVRLTTL 240
           DYWLSLLVEFEDGDGDIGAMQIKE  S GEW+DMNHLWGANWCIIGGPLKGPFSVRLTTL
Sbjct: 181 DYWLSLLVEFEDGDGDIGAMQIKETNS-GEWLDMNHLWGANWCIIGGPLKGPFSVRLTTL 240

Query: 241 STGRSLSARDIIPRNWSPKATYTSRLNFFS 271
           STGR+LSARDIIPRNWSPKATYTSRLNFFS
Sbjct: 241 STGRTLSARDIIPRNWSPKATYTSRLNFFS 269

[Close]

BLAST of Carg18448 vs. ExPASy Swiss-Prot
Match: Q9M0I2 (Expansin-B3 OS=Arabidopsis thaliana OX=3702 GN=EXPB3 PE=2 SV=2)

HSP 1 Score: 412.9 bits (1060), Expect = 2.8e-114
Identity = 185/242 (76.45%), Postives = 214/242 (88.43%), Query Frame = 0


Query: 27  TATAQLQHHVADLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLFR 86
           +A A    HV++ HWLPA ATWYGSP GDGSDGGACGYG LVDVKPL ARVGAV+P+LF+
Sbjct: 22  SALATTNRHVSNSHWLPAVATWYGSPNGDGSDGGACGYGTLVDVKPLHARVGAVNPILFK 81

Query: 87  NGEGCGACYKVKCLDNNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAITGEG 146
           NGEGCGACYKV+CLD +ICSRRAVT+I+TDECPG  CS  +THFDLSGA FGR+AI GE 
Sbjct: 82  NGEGCGACYKVRCLDKSICSRRAVTVIITDECPG--CSKTSTHFDLSGAVFGRLAIAGES 141

Query: 147 GQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKEAG 206
           G LRNRG IPVIYRRT CKY GK+IAFHVNEGSTD+WLSLLVEFEDG+GDIG+M I++AG
Sbjct: 142 GPLRNRGLIPVIYRRTACKYRGKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIRQAG 201

Query: 207 SAGEWVDMNHLWGANWCIIGGPLKGPFSVRLTTLSTGRSLSARDIIPRNWSPKATYTSRL 266
            A EW++M H+WGANWCIIGGPLKGPFS++LTTLS G++LSA D++PRNW+PKATY+SRL
Sbjct: 202 -AREWLEMKHVWGANWCIIGGPLKGPFSIKLTTLSAGKTLSATDVVPRNWAPKATYSSRL 260

Query: 267 NF 269
           NF
Sbjct: 262 NF 260

[Close]

BLAST of Carg18448 vs. ExPASy Swiss-Prot
Match: Q0DZ85 (Expansin-B16 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB16 PE=3 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 3.5e-109
Identity = 183/254 (72.05%), Postives = 212/254 (83.46%), Query Frame = 0


Query: 15  ALFCAAAVLEWFTATAQLQHHVADLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLK 74
           +L  AA V +  +  A   H V D  W PATATWYGS +GDGSDGGACGYG LVDV P+K
Sbjct: 21  SLLSAAFVFD--SGEAGAAHRVVDPEWHPATATWYGSADGDGSDGGACGYGTLVDVVPMK 80

Query: 75  ARVGAVSPVLFRNGEGCGACYKVKCLDNNICSRRAVTIIVTDECPGGYCSNGNTHFDLSG 134
            RVGAVSPVLF+ GEGCGACYKV+CLD +ICSRRAVT+IVTDECPGG C+ G THFDLSG
Sbjct: 81  TRVGAVSPVLFKGGEGCGACYKVRCLDASICSRRAVTVIVTDECPGGVCAFGRTHFDLSG 140

Query: 135 AAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGSTDYWLSLLVEFEDGD 194
           AAF R+A+ G GGQL+NRGEI V+YRRT CKY GK+IAFHVNEGST +WLSLLVEFEDGD
Sbjct: 141 AAFARLAVAGHGGQLQNRGEISVVYRRTACKYGGKNIAFHVNEGSTTFWLSLLVEFEDGD 200

Query: 195 GDIGAMQIKEAGSAGEWVDMNHLWGANWCIIGGPLKGPFSVRLTTLSTGRSLSARDIIPR 254
           GDIG+MQ+K+A SA +W DM H+WGA W +  GPL GPFSVRLTTL+T ++LSA+D+IP+
Sbjct: 201 GDIGSMQLKQANSA-QWQDMKHIWGATWSLTPGPLVGPFSVRLTTLTTRQTLSAQDVIPK 260

Query: 255 NWSPKATYTSRLNF 269
           NW+PKATYTSRLNF
Sbjct: 261 NWTPKATYTSRLNF 271

[Close]

BLAST of Carg18448 vs. ExPASy Swiss-Prot
Match: Q7X6J9 (Expansin-B17 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB17 PE=3 SV=2)

HSP 1 Score: 390.2 bits (1001), Expect = 1.9e-107
Identity = 174/231 (75.32%), Postives = 201/231 (87.01%), Query Frame = 0


Query: 38  DLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKV 97
           D+ W PATATWYG  EGDGS GGACGYG+LVDV P+KARVG+VSPVLF++GEGCGACYKV
Sbjct: 45  DMEWRPATATWYGDAEGDGSTGGACGYGSLVDVVPMKARVGSVSPVLFKDGEGCGACYKV 104

Query: 98  KCLDNNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPV 157
           KCLD+ ICSRRAVT+IVTDECPGG C+ G THFDLSGAAF RMA+ G GG LR+RG++ V
Sbjct: 105 KCLDHGICSRRAVTVIVTDECPGGLCAFGRTHFDLSGAAFSRMAVAGAGGHLRDRGQLSV 164

Query: 158 IYRRTPCKYPGKHIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKEAGSAGEWVDMNHL 217
           +YRRT CKY GK+IAF VNEGST++WLSLLVEFEDG GDIG+MQIK+A S  EW+DM H+
Sbjct: 165 VYRRTACKYGGKNIAFRVNEGSTNFWLSLLVEFEDGQGDIGSMQIKQANSV-EWLDMKHV 224

Query: 218 WGANWCIIGGPLKGPFSVRLTTLSTGRSLSARDIIPRNWSPKATYTSRLNF 269
           WGA WC++ GPL GPFSVRLTTLS  ++L+ARD+IPRNW P ATYTSRLNF
Sbjct: 225 WGATWCLVRGPLVGPFSVRLTTLSAQKALTARDVIPRNWKPTATYTSRLNF 274

[Close]

BLAST of Carg18448 vs. ExPASy Swiss-Prot
Match: Q9SKU2 (Expansin-B1 OS=Arabidopsis thaliana OX=3702 GN=EXPB1 PE=2 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 6.4e-103
Identity = 173/245 (70.61%), Postives = 200/245 (81.63%), Query Frame = 0


Query: 28  ATAQLQH---HVADLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVL 87
           +T  L H    VA   WLPATATWYGS EGDGS GGACGYG+LVDVKP KARVGAVSP+L
Sbjct: 24  STPPLTHSNQQVAATRWLPATATWYGSAEGDGSSGGACGYGSLVDVKPFKARVGAVSPIL 83

Query: 88  FRNGEGCGACYKVKCLDNNICSRRAVTIIVTDECPGGYCSNG-NTHFDLSGAAFGRMAIT 147
           F+ GEGCGACYKV+CLD  ICS+RAVTII TD+ P G  +   +THFDLSGAAFG MAI 
Sbjct: 84  FKGGEGCGACYKVRCLDKTICSKRAVTIIATDQSPSGPSAKAKHTHFDLSGAAFGHMAIP 143

Query: 148 GEGGQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIK 207
           G  G +RNRG + ++YRRT CKY GK+IAFHVN GSTDYWLSLL+E+EDG+GDIG+M I+
Sbjct: 144 GHNGVIRNRGLLNILYRRTACKYRGKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIR 203

Query: 208 EAGSAGEWVDMNHLWGANWCIIGGPLKGPFSVRLTTLSTGRSLSARDIIPRNWSPKATYT 267
           +AGS  EW+ M H+WGANWCI+ GPLKGPFSV+LTTLS  ++LSA D+IP NW PKATYT
Sbjct: 204 QAGSK-EWISMKHIWGANWCIVEGPLKGPFSVKLTTLSNNKTLSATDVIPSNWVPKATYT 263

Query: 268 SRLNF 269
           SRLNF
Sbjct: 264 SRLNF 267

[Close]

BLAST of Carg18448 vs. ExPASy Swiss-Prot
Match: Q9SHY6 (Putative expansin-B2 OS=Arabidopsis thaliana OX=3702 GN=EXPB2 PE=3 SV=2)

HSP 1 Score: 252.3 bits (643), Expect = 6.2e-66
Identity = 110/233 (47.21%), Postives = 159/233 (68.24%), Query Frame = 0


Query: 37  ADLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYK 96
           +D  W  A +TWYG+P G GSDGGACGYGN V   P    V A  P LF++G+GCGACY+
Sbjct: 43  SDSDWSIAGSTWYGNPTGYGSDGGACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQ 102

Query: 97  VKCLDNNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIP 156
           VKC   + CS+  VT+++TDECPG  C   + HFDLSG AFG MAI+G+  QLRN GE+ 
Sbjct: 103 VKCTSKSACSKNPVTVVITDECPG--CVKESVHFDLSGTAFGAMAISGQDSQLRNVGELQ 162

Query: 157 VIYRRTPCKYPGKHIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKEAGSAGEWVDMNH 216
           ++Y++  C Y GK + F V++GS     ++LV + +GDG+IG +++K+A  + +W+ M+ 
Sbjct: 163 ILYKKVECNYIGKTVTFQVDKGSNANSFAVLVAYVNGDGEIGRIELKQALDSDKWLSMSQ 222

Query: 217 LWGANWCI-IGGPLKGPFSVRLTTLSTGRSLSARDIIPRNWSPKATYTSRLNF 269
            WGA W + +  PL+ P S+R+T+L +G+++ A ++IP NW P A Y S +NF
Sbjct: 223 SWGAVWKLDVSSPLRAPLSLRVTSLESGKTVVASNVIPANWQPGAIYKSNVNF 273

[Close]

BLAST of Carg18448 vs. ExPASy TrEMBL
Match: A0A6J1FXB3 (expansin-B3-like OS=Cucurbita moschata OX=3662 GN=LOC111448390 PE=3 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 2.6e-160
Identity = 267/270 (98.89%), Postives = 269/270 (99.63%), Query Frame = 0


Query: 1   MHLLLHCRGFRLVRALFCAAAVLEWFTATAQLQHHVADLHWLPATATWYGSPEGDGSDGG 60
           MHLLLHCRGFR+VRALFCAAAVLEWF+ATAQLQHHVADLHWLPATATWYGSPEGDGSDGG
Sbjct: 5   MHLLLHCRGFRIVRALFCAAAVLEWFSATAQLQHHVADLHWLPATATWYGSPEGDGSDGG 64

Query: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDNNICSRRAVTIIVTDECPG 120
           ACGYGN VDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDNNICSRRAVTIIVTDECPG
Sbjct: 65  ACGYGNSVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDNNICSRRAVTIIVTDECPG 124

Query: 121 GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGST 180
           GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGST
Sbjct: 125 GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGST 184

Query: 181 DYWLSLLVEFEDGDGDIGAMQIKEAGSAGEWVDMNHLWGANWCIIGGPLKGPFSVRLTTL 240
           DYWLSLLVEFEDGDGDIGAMQIKEAGSAGEWVDMNHLWGANWCIIGGPLKGPFSVRLTTL
Sbjct: 185 DYWLSLLVEFEDGDGDIGAMQIKEAGSAGEWVDMNHLWGANWCIIGGPLKGPFSVRLTTL 244

Query: 241 STGRSLSARDIIPRNWSPKATYTSRLNFFS 271
           STGRSLSARDIIPRNWSPKATYTSRLNFFS
Sbjct: 245 STGRSLSARDIIPRNWSPKATYTSRLNFFS 274

[Close]

BLAST of Carg18448 vs. ExPASy TrEMBL
Match: A0A6J1J9W0 (expansin-B3-like OS=Cucurbita maxima OX=3661 GN=LOC111483878 PE=3 SV=1)

HSP 1 Score: 572.8 bits (1475), Expect = 7.7e-160
Identity = 269/270 (99.63%), Postives = 269/270 (99.63%), Query Frame = 0


Query: 1   MHLLLHCRGFRLVRALFCAAAVLEWFTATAQLQHHVADLHWLPATATWYGSPEGDGSDGG 60
           MHLLLHCRGFRLVRALFCAAAVLEWFTATAQLQHHVADLHWLPATATWYGSPEGDGSDGG
Sbjct: 1   MHLLLHCRGFRLVRALFCAAAVLEWFTATAQLQHHVADLHWLPATATWYGSPEGDGSDGG 60

Query: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDNNICSRRAVTIIVTDECPG 120
           ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDNNICSRRAVTIIVTDECPG
Sbjct: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDNNICSRRAVTIIVTDECPG 120

Query: 121 GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGST 180
           GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGST
Sbjct: 121 GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGST 180

Query: 181 DYWLSLLVEFEDGDGDIGAMQIKEAGSAGEWVDMNHLWGANWCIIGGPLKGPFSVRLTTL 240
           DYWLSLLVEFEDGDGDIGAMQIKEAGS GEWVDMNHLWGANWCIIGGPLKGPFSVRLTTL
Sbjct: 181 DYWLSLLVEFEDGDGDIGAMQIKEAGS-GEWVDMNHLWGANWCIIGGPLKGPFSVRLTTL 240

Query: 241 STGRSLSARDIIPRNWSPKATYTSRLNFFS 271
           STGRSLSARDIIPRNWSPKATYTSRLNFFS
Sbjct: 241 STGRSLSARDIIPRNWSPKATYTSRLNFFS 269

[Close]

BLAST of Carg18448 vs. ExPASy TrEMBL
Match: A0A515MEM6 (Expansin-B3-like OS=Luffa aegyptiaca OX=3670 PE=2 SV=1)

HSP 1 Score: 529.3 bits (1362), Expect = 9.7e-147
Identity = 251/270 (92.96%), Postives = 256/270 (94.81%), Query Frame = 0


Query: 1   MHLLLHCRGFRLVRALFCAAAVLEWFTATAQLQHHVADLHWLPATATWYGSPEGDGSDGG 60
           M LLL  RGF LV A F A AVLEWFTA AQ QHHV DLHWLPATATWYGSPEGDGSDGG
Sbjct: 1   MRLLLRRRGFGLVGAFFFATAVLEWFTAAAQPQHHVPDLHWLPATATWYGSPEGDGSDGG 60

Query: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDNNICSRRAVTIIVTDECPG 120
           ACGYGNLVDV+PLKARVGAVSPVLFRNGEGCGACYKVKCLD++ICSRRAVTIIVTDECPG
Sbjct: 61  ACGYGNLVDVRPLKARVGAVSPVLFRNGEGCGACYKVKCLDHSICSRRAVTIIVTDECPG 120

Query: 121 GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGST 180
           GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGK+IAFHVNEGST
Sbjct: 121 GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180

Query: 181 DYWLSLLVEFEDGDGDIGAMQIKEAGSAGEWVDMNHLWGANWCIIGGPLKGPFSVRLTTL 240
           DYWLSLLVEFEDGDGDIGAMQIKEA S  EW+DMNHLWGANWCIIGGPLKGPFSVRLTTL
Sbjct: 181 DYWLSLLVEFEDGDGDIGAMQIKEANSE-EWLDMNHLWGANWCIIGGPLKGPFSVRLTTL 240

Query: 241 STGRSLSARDIIPRNWSPKATYTSRLNFFS 271
           STGRSLSARDIIPRNWSPKATYTSRLNFFS
Sbjct: 241 STGRSLSARDIIPRNWSPKATYTSRLNFFS 269

[Close]

BLAST of Carg18448 vs. ExPASy TrEMBL
Match: A0A5D3C3I4 (Expansin-B3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G001520 PE=3 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 1.2e-144
Identity = 245/270 (90.74%), Postives = 255/270 (94.44%), Query Frame = 0


Query: 1   MHLLLHCRGFRLVRALFCAAAVLEWFTATAQLQHHVADLHWLPATATWYGSPEGDGSDGG 60
           M L LH   FRL+ ALF AAA+L+W TA AQLQH + DLHWLPATATWYGSPEGDGSDGG
Sbjct: 1   MLLFLHHCSFRLITALFSAAALLQWSTAAAQLQHRLPDLHWLPATATWYGSPEGDGSDGG 60

Query: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDNNICSRRAVTIIVTDECPG 120
           ACGYGNLVDVKPLKARVGAVSP+LFRNGEGCGACYKVKCLD+NICSRRAVTIIVTDECPG
Sbjct: 61  ACGYGNLVDVKPLKARVGAVSPILFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPG 120

Query: 121 GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGST 180
           GYCSNGNTHFDLSGAAFGRMAI GEGGQLRNRGEIPVIYRRTPCKYPGK+IAFHVNEGST
Sbjct: 121 GYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180

Query: 181 DYWLSLLVEFEDGDGDIGAMQIKEAGSAGEWVDMNHLWGANWCIIGGPLKGPFSVRLTTL 240
           DYWLSLLVEFEDGDGDIGAMQIKE  S GEW+DMNHLWGANWCIIGGPLKGPFSVRLTTL
Sbjct: 181 DYWLSLLVEFEDGDGDIGAMQIKEKNS-GEWLDMNHLWGANWCIIGGPLKGPFSVRLTTL 240

Query: 241 STGRSLSARDIIPRNWSPKATYTSRLNFFS 271
           STGR+LSARDIIPRNWSPKATYTSRLNFF+
Sbjct: 241 STGRALSARDIIPRNWSPKATYTSRLNFFT 269

[Close]

BLAST of Carg18448 vs. ExPASy TrEMBL
Match: A0A1S3BJY6 (expansin-B3 OS=Cucumis melo OX=3656 GN=LOC103490518 PE=3 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 1.2e-144
Identity = 245/270 (90.74%), Postives = 255/270 (94.44%), Query Frame = 0


Query: 1   MHLLLHCRGFRLVRALFCAAAVLEWFTATAQLQHHVADLHWLPATATWYGSPEGDGSDGG 60
           M L LH   FRL+ ALF AAA+L+W TA AQLQH + DLHWLPATATWYGSPEGDGSDGG
Sbjct: 1   MLLFLHHCSFRLITALFSAAALLQWSTAAAQLQHRLPDLHWLPATATWYGSPEGDGSDGG 60

Query: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDNNICSRRAVTIIVTDECPG 120
           ACGYGNLVDVKPLKARVGAVSP+LFRNGEGCGACYKVKCLD+NICSRRAVTIIVTDECPG
Sbjct: 61  ACGYGNLVDVKPLKARVGAVSPILFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPG 120

Query: 121 GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGST 180
           GYCSNGNTHFDLSGAAFGRMAI GEGGQLRNRGEIPVIYRRTPCKYPGK+IAFHVNEGST
Sbjct: 121 GYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180

Query: 181 DYWLSLLVEFEDGDGDIGAMQIKEAGSAGEWVDMNHLWGANWCIIGGPLKGPFSVRLTTL 240
           DYWLSLLVEFEDGDGDIGAMQIKE  S GEW+DMNHLWGANWCIIGGPLKGPFSVRLTTL
Sbjct: 181 DYWLSLLVEFEDGDGDIGAMQIKEKNS-GEWLDMNHLWGANWCIIGGPLKGPFSVRLTTL 240

Query: 241 STGRSLSARDIIPRNWSPKATYTSRLNFFS 271
           STGR+LSARDIIPRNWSPKATYTSRLNFF+
Sbjct: 241 STGRALSARDIIPRNWSPKATYTSRLNFFT 269

[Close]

BLAST of Carg18448 vs. TAIR 10
Match: AT4G28250.1 (expansin B3 )

HSP 1 Score: 412.9 bits (1060), Expect = 2.0e-115
Identity = 185/242 (76.45%), Postives = 214/242 (88.43%), Query Frame = 0


Query: 27  TATAQLQHHVADLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLFR 86
           +A A    HV++ HWLPA ATWYGSP GDGSDGGACGYG LVDVKPL ARVGAV+P+LF+
Sbjct: 22  SALATTNRHVSNSHWLPAVATWYGSPNGDGSDGGACGYGTLVDVKPLHARVGAVNPILFK 81

Query: 87  NGEGCGACYKVKCLDNNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAITGEG 146
           NGEGCGACYKV+CLD +ICSRRAVT+I+TDECPG  CS  +THFDLSGA FGR+AI GE 
Sbjct: 82  NGEGCGACYKVRCLDKSICSRRAVTVIITDECPG--CSKTSTHFDLSGAVFGRLAIAGES 141

Query: 147 GQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKEAG 206
           G LRNRG IPVIYRRT CKY GK+IAFHVNEGSTD+WLSLLVEFEDG+GDIG+M I++AG
Sbjct: 142 GPLRNRGLIPVIYRRTACKYRGKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIRQAG 201

Query: 207 SAGEWVDMNHLWGANWCIIGGPLKGPFSVRLTTLSTGRSLSARDIIPRNWSPKATYTSRL 266
            A EW++M H+WGANWCIIGGPLKGPFS++LTTLS G++LSA D++PRNW+PKATY+SRL
Sbjct: 202 -AREWLEMKHVWGANWCIIGGPLKGPFSIKLTTLSAGKTLSATDVVPRNWAPKATYSSRL 260

Query: 267 NF 269
           NF
Sbjct: 262 NF 260

[Close]

BLAST of Carg18448 vs. TAIR 10
Match: AT4G28250.2 (expansin B3 )

HSP 1 Score: 396.7 bits (1018), Expect = 1.4e-110
Identity = 181/242 (74.79%), Postives = 210/242 (86.78%), Query Frame = 0


Query: 27  TATAQLQHHVADLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLFR 86
           +A A    HV++ HWLPA ATWYGSP GDGSDGGACGYG LVDVKPL ARVGAV+P+LF+
Sbjct: 22  SALATTNRHVSNSHWLPAVATWYGSPNGDGSDGGACGYGTLVDVKPLHARVGAVNPILFK 81

Query: 87  NGEGCGACYKVKCLDNNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAITGEG 146
           NGEGCGACYKV+CLD +ICSRRAVT+I+TDECPG  CS  +THFDLSGA FGR+AI GE 
Sbjct: 82  NGEGCGACYKVRCLDKSICSRRAVTVIITDECPG--CSKTSTHFDLSGAVFGRLAIAGES 141

Query: 147 GQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKEAG 206
           G LRNRG IPVIYRR      GK+IAFHVNEGSTD+WLSLLVEFEDG+GDIG+M I++AG
Sbjct: 142 GPLRNRGLIPVIYRR------GKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIRQAG 201

Query: 207 SAGEWVDMNHLWGANWCIIGGPLKGPFSVRLTTLSTGRSLSARDIIPRNWSPKATYTSRL 266
            A EW++M H+WGANWCIIGGPLKGPFS++LTTLS G++LSA D++PRNW+PKATY+SRL
Sbjct: 202 -AREWLEMKHVWGANWCIIGGPLKGPFSIKLTTLSAGKTLSATDVVPRNWAPKATYSSRL 254

Query: 267 NF 269
           NF
Sbjct: 262 NF 254

[Close]

BLAST of Carg18448 vs. TAIR 10
Match: AT2G20750.1 (expansin B1 )

HSP 1 Score: 375.2 bits (962), Expect = 4.5e-104
Identity = 173/245 (70.61%), Postives = 200/245 (81.63%), Query Frame = 0


Query: 28  ATAQLQH---HVADLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVL 87
           +T  L H    VA   WLPATATWYGS EGDGS GGACGYG+LVDVKP KARVGAVSP+L
Sbjct: 24  STPPLTHSNQQVAATRWLPATATWYGSAEGDGSSGGACGYGSLVDVKPFKARVGAVSPIL 83

Query: 88  FRNGEGCGACYKVKCLDNNICSRRAVTIIVTDECPGGYCSNG-NTHFDLSGAAFGRMAIT 147
           F+ GEGCGACYKV+CLD  ICS+RAVTII TD+ P G  +   +THFDLSGAAFG MAI 
Sbjct: 84  FKGGEGCGACYKVRCLDKTICSKRAVTIIATDQSPSGPSAKAKHTHFDLSGAAFGHMAIP 143

Query: 148 GEGGQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIK 207
           G  G +RNRG + ++YRRT CKY GK+IAFHVN GSTDYWLSLL+E+EDG+GDIG+M I+
Sbjct: 144 GHNGVIRNRGLLNILYRRTACKYRGKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIR 203

Query: 208 EAGSAGEWVDMNHLWGANWCIIGGPLKGPFSVRLTTLSTGRSLSARDIIPRNWSPKATYT 267
           +AGS  EW+ M H+WGANWCI+ GPLKGPFSV+LTTLS  ++LSA D+IP NW PKATYT
Sbjct: 204 QAGSK-EWISMKHIWGANWCIVEGPLKGPFSVKLTTLSNNKTLSATDVIPSNWVPKATYT 263

Query: 268 SRLNF 269
           SRLNF
Sbjct: 264 SRLNF 267

[Close]

BLAST of Carg18448 vs. TAIR 10
Match: AT1G65680.1 (expansin B2 )

HSP 1 Score: 252.3 bits (643), Expect = 4.4e-67
Identity = 110/233 (47.21%), Postives = 159/233 (68.24%), Query Frame = 0


Query: 37  ADLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYK 96
           +D  W  A +TWYG+P G GSDGGACGYGN V   P    V A  P LF++G+GCGACY+
Sbjct: 43  SDSDWSIAGSTWYGNPTGYGSDGGACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQ 102

Query: 97  VKCLDNNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIP 156
           VKC   + CS+  VT+++TDECPG  C   + HFDLSG AFG MAI+G+  QLRN GE+ 
Sbjct: 103 VKCTSKSACSKNPVTVVITDECPG--CVKESVHFDLSGTAFGAMAISGQDSQLRNVGELQ 162

Query: 157 VIYRRTPCKYPGKHIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKEAGSAGEWVDMNH 216
           ++Y++  C Y GK + F V++GS     ++LV + +GDG+IG +++K+A  + +W+ M+ 
Sbjct: 163 ILYKKVECNYIGKTVTFQVDKGSNANSFAVLVAYVNGDGEIGRIELKQALDSDKWLSMSQ 222

Query: 217 LWGANWCI-IGGPLKGPFSVRLTTLSTGRSLSARDIIPRNWSPKATYTSRLNF 269
            WGA W + +  PL+ P S+R+T+L +G+++ A ++IP NW P A Y S +NF
Sbjct: 223 SWGAVWKLDVSSPLRAPLSLRVTSLESGKTVVASNVIPANWQPGAIYKSNVNF 273

[Close]

BLAST of Carg18448 vs. TAIR 10
Match: AT2G45110.1 (expansin B4 )

HSP 1 Score: 218.8 bits (556), Expect = 5.4e-57
Identity = 102/226 (45.13%), Postives = 144/226 (63.72%), Query Frame = 0


Query: 44  ATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDNN 103
           A  TWYG P G GS GGACGYG+ V   PL A V A  P LF NG+GCG CY+V C+ + 
Sbjct: 36  AGVTWYGEPFGAGSTGGACGYGSAVANPPLYAMVSAGGPSLFNNGKGCGTCYQVVCIGHP 95

Query: 104 ICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTP 163
            CS   +T+ +TDECPGG C++   H DLSG A G +A  G+  QLR+ G I V Y+R  
Sbjct: 96  ACSGSPITVTITDECPGGPCASEPVHIDLSGKAMGALAKPGQADQLRSAGVIRVNYKRAA 155

Query: 164 CKYPGKHIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKEAGSAGEWVDMNHLWGANWC 223
           C Y G +I F ++ G+  Y++S +VE+E+GDGD+  ++I+ AG  G ++ M  +  A W 
Sbjct: 156 CLYRGTNIVFRMDAGANPYYISFVVEYENGDGDLSNVEIQPAG--GSFISMQEMRSAVWK 215

Query: 224 I-IGGPLKGPFSVRLTTLSTGRSLSARDIIPRNWSPKATYTSRLNF 269
           +  G  L+GPF++RLT+  + + + A ++IP NW P  +Y S +NF
Sbjct: 216 VNSGSALRGPFNIRLTSGESHKVIVAYNVIPANWKPDESYRSIVNF 259

The following BLAST results are available for this feature:

BLAST of Carg18448 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023512091.1	2.2e-161	100.00	expansin-B3-like [Cucurbita pepo subsp. pepo] >KAG7010368.1 Expansin-B3, partial...	[more]
KAG6570506.1	2.2e-161	100.00	Expansin-B3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022943728.1	5.4e-160	98.89	expansin-B3-like [Cucurbita moschata]	[more]
XP_022986016.1	1.6e-159	99.63	expansin-B3-like [Cucurbita maxima]	[more]
XP_038901858.1	6.9e-147	92.22	expansin-B3-like [Benincasa hispida]	[more]

BLAST of Carg18448 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M0I2	2.8e-114	76.45	Expansin-B3 OS=Arabidopsis thaliana OX=3702 GN=EXPB3 PE=2 SV=2	[more]
Q0DZ85	3.5e-109	72.05	Expansin-B16 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB16 PE=3 SV=1	[more]
Q7X6J9	1.9e-107	75.32	Expansin-B17 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB17 PE=3 SV=2	[more]
Q9SKU2	6.4e-103	70.61	Expansin-B1 OS=Arabidopsis thaliana OX=3702 GN=EXPB1 PE=2 SV=1	[more]
Q9SHY6	6.2e-66	47.21	Putative expansin-B2 OS=Arabidopsis thaliana OX=3702 GN=EXPB2 PE=3 SV=2	[more]

BLAST of Carg18448 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FXB3	2.6e-160	98.89	expansin-B3-like OS=Cucurbita moschata OX=3662 GN=LOC111448390 PE=3 SV=1	[more]
A0A6J1J9W0	7.7e-160	99.63	expansin-B3-like OS=Cucurbita maxima OX=3661 GN=LOC111483878 PE=3 SV=1	[more]
A0A515MEM6	9.7e-147	92.96	Expansin-B3-like OS=Luffa aegyptiaca OX=3670 PE=2 SV=1	[more]
A0A5D3C3I4	1.2e-144	90.74	Expansin-B3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G001520 P...	[more]
A0A1S3BJY6	1.2e-144	90.74	expansin-B3 OS=Cucumis melo OX=3656 GN=LOC103490518 PE=3 SV=1	[more]

BLAST of Carg18448 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28250.1	2.0e-115	76.45	expansin B3	[more]
AT4G28250.2	1.4e-110	74.79	expansin B3	[more]
AT2G20750.1	4.5e-104	70.61	expansin B1	[more]
AT1G65680.1	4.4e-67	47.21	expansin B2	[more]
AT2G45110.1	5.4e-57	45.13	expansin B4	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005795	Major pollen allergen Lol pI	PRINTS	PR00829	LOLP1ALLERGN	coord: 141..156 score: 39.2 coord: 240..257 score: 33.84 coord: 189..204 score: 47.73 coord: 119..134 score: 38.07 coord: 79..90 score: 26.52 coord: 173..188 score: 50.57
IPR007118	Expansin/Lol pI	PRINTS	PR01225	EXPANSNFAMLY	coord: 211..225 score: 39.83 coord: 81..99 score: 51.84 coord: 58..76 score: 43.82 coord: 152..168 score: 47.94 coord: 250..264 score: 30.83 coord: 40..55 score: 42.34
IPR007112	Expansin/pollen allergen, DPBB domain	SMART	SM00837	dpbb_1	coord: 77..159 e-value: 2.5E-10 score: 50.3
IPR007112	Expansin/pollen allergen, DPBB domain	PROSITE	PS50842	EXPANSIN_EG45	coord: 59..169 score: 31.339426
IPR009009	RlpA-like protein, double-psi beta-barrel domain	PFAM	PF03330	DPBB_1	coord: 79..158 e-value: 7.0E-17 score: 61.5
IPR036749	Expansin, cellulose-binding-like domain superfamily	GENE3D	2.60.40.760		coord: 166..269 e-value: 1.5E-29 score: 103.8
IPR036749	Expansin, cellulose-binding-like domain superfamily	SUPERFAMILY	49590	PHL pollen allergen	coord: 169..264
IPR036908	RlpA-like domain superfamily	GENE3D	2.40.40.10		coord: 26..165 e-value: 2.3E-44 score: 152.9
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	50685	Barwin-like endoglucanases	coord: 38..168
IPR007117	Expansin, cellulose-binding-like domain	PFAM	PF01357	Expansin_C	coord: 171..253 e-value: 1.5E-24 score: 85.8
IPR007117	Expansin, cellulose-binding-like domain	PROSITE	PS50843	EXPANSIN_CBD	coord: 182..264 score: 22.405254
None	No IPR available	PANTHER	PTHR31692	EXPANSIN-B3	coord: 18..269
None	No IPR available	PANTHER	PTHR31692:SF96	EXPANSIN-LIKE PROTEIN B1	coord: 18..269

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18448-RA	Carg18448-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019953	sexual reproduction
biological_process	GO:0006949	syncytium formation
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane