Carg18320 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18320
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	RAB GTPase homolog 8A
Location	Carg_Chr04: 1074406 .. 1078443 (-)
RNA-Seq Expression	Carg18320
Synteny	Carg18320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCGTTTCTCTCCCTCTCTCTTCTTTCTCTCTCTTCCCTCTCCCCGTTCGATGTCGCCGACGATTTGCTAAGCTTCGTCAAGGTAATCTCCTTCTCTGTCTTCTGTTTTCTCCTCTCTGCGTTCGATCTTTTGAAAGAGTTGTCGTTTCATTTCATAGAGGAAGTCATTTTTTGTGTTTGTCCCGTTTTCCAGGTCGCAGAAGGGAATCGAATTTCGTTGAAGGATACTGGAAACCGATGGCTGCACCACCGGCAAGGGCTCGTGCTGATTACGATTACCTCATTAAGCTTTTGCTTATTGGCGATAGCGGTATGTTTCCAACCCTTGGTTTTTTGTTTTTTGAGTTTTGAATTCTTTTTATGTTTGGGTGTCGAAGAAGTGATGGGAATGAAAATGGGTGGTGCTGTTAGAGATCTGATGGAACGGGTTATGTGTAGCGTGGTGTGGTTTTGTTTGCATCAACATGATTTCGGGTTTTCTCGTTTTGGTGAGACTAAATTTATTGCATGTTCTCAATTTGTGTTTGGACCTTCTGATTTGAAAATGGTTGATTCTCGTCGATCTCTCCCTCTATTTGGGACTCTTTTTGGGCTCAAGTTTGGCATTCTCGACATGCTGTGTTTTATATTTCATGTTGTGGTGGTATGCGCCATGGTTCTGTGTGCAACAACGTCGTAAGACCTGGTAAAAGGGACCTTGATCTTTTGACGCCCAACGGAGAGAACAGTTTATTTCTCAATTTAAGAAGGCTGGCCGTTGGGATTACTTTTCGAGAACATTACTTCAATTATTGAGAGTTATGCTTGTCTGTTGGAATCGAGGTGAAATTATTGAGTGTTATGCTTAAATGGGCGTCAGATTTGTGAGCCTAACCATTTTGCATTTTAATAGCCTTCTTGTAAGCCTTTTCCATTTCGATTATTTTGCAGGTGTGGGAAAGAGTTGTCTGCTTCTGCGTTTTTCTGATGGTTCTTTCACAACCAGTTTTATCACCACAATTGGGTTTGTAGCCTGTGTTCCCTTGAAGCTTGCATGTTGAAACGTCTTAGTGCTGTATCAATTTGAAAACATTCATAAAGTTTAGCAATGTTCATAGATTTGTAGTTGGGATTATTAGCTGAAATGAGGGACAAGAGTGGTTTGGAAGGATTGTCAGTTTATCAGATAGCTGGTTTGACATTTTCATGTACTGGTGTGTATGATATTAATAGTTCTGCCCGAAAAACTCTATATGTTTTCTAAGTACGTGCATTGTTTCATTTTTTTTTCTCAATGAAAGTATAGAATTTCAGTTTAAAAAAATGTAGTTTTTAATCTCAGATAATATGCATCTTATGGCAGTATTGATTTTAAGATACGAACCATTGAGCTTGATGGGAAGAGAATCAAATTGCAAATCTGGGATACAGCTGGTCAGGAACGTTTCCGGACTATCACAACAGGTATGCATCTAATATTTGGTTTTATTTCTTCTATGTACTGTACTAGAACAGATGCTTCCTCTATGAAAGACGGGCATCTAACTGTATGATCAAAATGGTTTGGAATAAAGCTGGAAGGTGACGGCTAGAAATTTAAATATACATATAGTTCTATTCATTTAGGTATGTTAGCTTATGATGTTTATTTTGACATCAACCGTTCAATTCTTTCAATTTAGTAATGAAAAGGATTAGAATTGAATATCAAGGTCGAACGTGAGAATAAGTGCTTCTAATTGTTGTCATGTGGTTTGTTGAGAGAAGCGGTGGTGAAGTAACTTTCTTCTCCAACTCCCTAAAACAATTTCTTATTCCGATGGCAGTGCAGTGAAGACTTTATCATGTCACTAATTTTGATGATTGTTGTTTGAATCTTTGGTGTAATTTTGTTTGTCACCCTGTAGCTTACTATCGAGGAGCCATGGGAATTTTGCTGGTTTATGATGTCACTGACGAGTCATCTTTCAACAGTGAGTTATTTCATTGCCTATCTATGATTAATTGATTTGCATTAGCTCCGCTCATCTTTTATATATAATATCAAATGTTTGACCTTGATGGGCTTATTGTTCATTCTATCTACCGTTTCATTCAAGATTTTTCTAACTTGTGAAGTTAGTTTATATGACCATTAAGAGCTTTAGTTAGGGGAATGAGTGGGTCGAATATTTTTTTGTCCCTGATGTCAAATTAGCCTATAGTTTAAGAAAAATGAATCTTTGAACTAAAATAACCAGCCATCAAATGGATCAAATTGGAATGAACACCACAACTGACGACTAGAACCAACTGGTTGGATATTTTGAGGTGTTTTTGGCTTTTTGGGTTTAAATCGTACCCTTATGGTCTCTAATCATTTCTACTGTTTTCTTATTTCCATCTATTACGAAGTTTATTCTTTTCTTATTCAGACATTAGGAATTGGATTCGCAATATTGAACAGCATGCATCTGATAATGTGAACAAGATACTGGTAGGAAATAAGGCTGATATGGATGAAAGTAAAAGGGTAAGCATATTATATTGCTCAATTGCCCTCAACCTTTATCTTTCTTATTGCTTGGCACCAAAGAATTACAGGTTCAAGAATTTAGAATGCAACTCCACTTTAAAGCTCATACTTAGCTTCAAATGTCACAAAATAGGAGTTAGTTTTAATATTTCAAGTTGATGTTATCCTGTGTTTACCTTGTGTGTGTCTTTCTTTTATTTTGTCGCAGGCTGTGCCTACTTCTAAGGGTCAAGCTCTTGCTGATGAATATGGAATCAAATTCTTTGAAACCGTAAGTTAGAAATGATTCAAGATCGCATGAAGTTGGAATCTTTGTAGGATTTATTTATTTGTACTTAGTTCTTGCATTTTAACATAATCCGCAGAGTGCAAAGACAAACATGAATGTCGAGGAGGTTTTCTTTTCAATTGCCAGGGACATTAAGCAAAGGCTTTCAGACACTGATTCCAAGTCAGAGGTATTTACTTCGTTGTCTTCAATCCTGGATTGCTTTGAATCTTCTTTAGCCTTGTAGGAAGAAATTGCTGTCACCAATAAAATCCTTAACGTGGATGAGATCTGTTTGTAATCCAGCCTCAAACAATCAAAATAAACAAGCCAGACGCAGGTGGGGGCGATGGTCAAGCCGCTCAAAAGTCAACTTGCTGTGGCTCGTAAAATGGTAGTAGAAGATCAAACCAATTGAAAGAGCGAAAACGCTCTTCATTTCGTGGTGGTGCCTTCTGGGAACAAAATCAAAGAGTCTGGTGAGACTACTGTGGTGGGGCTTTTGTTCATCCATGCTTATGTGTTTGATTGTTTCTTTTTGTTCCTCTACTTTGGCAGAAGACAGTCTGATTTTCCATTTTCTTATTATTATTTTTTTTATATATTGGAGGTTGGGATTTAGGACTCTTCTATTATTTTACGTTACGTGTTGTTGGTGTAGATAGATAATCAAGATTCTTGAAGCATTTTCTTTCTTTAGGAGCAGGGAAGAATGGTGGTCTCTGCTGCATCAGTTGCTCTGTAATTGGGATTATAAGACCCTTTCTTAACGCCCAACTCTAATTGGAATTATTGGATGTTGTTAACTCTTGGACGATGCTAAATCCATGCAATTAATTTCCTTGGCTTGTTGGATTATTTTGTGATTTTATTTTTTTATTCCTTAGATCATGCATATTATACTCAGGTCTCTGTGATGGTTTAGTAACACTTCTAGTTTTTTCATAGTTTTTTCATTAATGAAATTGAGAAAGAAATTGAAAGATCATTTTTTTAGTATGCATATTGATTTCTTGTGGCCTATGATTTTTGTCTTCAATTTGAGGGCAAGCTATTCTTAAAGATGCTCAGAAGGACTTAGATTATTGGAAGATAAATAAGATAGAAAGAAACATTCGGTATCTAGACTGGACGTCACGTGACATGCAGGTTATCGGAGACGATAAAGTATGATACGTTTATCTTCAAACAAATTAAATAGTAAGATGGGTAAATGATAATAGATAAGCAAGTCAGCAGTATCTGAATCTTCATAATCTGGAAATAATTGGTACGA

mRNA sequence

TTCGTTTCTCTCCCTCTCTCTTCTTTCTCTCTCTTCCCTCTCCCCGTTCGATGTCGCCGACGATTTGCTAAGCTTCGTCAAGGTCGCAGAAGGGAATCGAATTTCGTTGAAGGATACTGGAAACCGATGGCTGCACCACCGGCAAGGGCTCGTGCTGATTACGATTACCTCATTAAGCTTTTGCTTATTGGCGATAGCGGTGTGGGAAAGAGTTGTCTGCTTCTGCGTTTTTCTGATGGTTCTTTCACAACCAGTTTTATCACCACAATTGGTATTGATTTTAAGATACGAACCATTGAGCTTGATGGGAAGAGAATCAAATTGCAAATCTGGGATACAGCTGGTCAGGAACGTTTCCGGACTATCACAACAGCTTACTATCGAGGAGCCATGGGAATTTTGCTGGTTTATGATGTCACTGACGAGTCATCTTTCAACAGTGATTTATTCTTTTCTTATTCAGACATTAGGAATTGGATTCGCAATATTGAACAGCATGCATCTGATAATGTGAACAAGATACTGGTAGGAAATAAGGCTGATATGGATGAAAGTAAAAGGGCTGTGCCTACTTCTAAGGGTCAAGCTCTTGCTGATGAATATGGAATCAAATTCTTTGAAACCAGTGCAAAGACAAACATGAATGTCGAGGAGGTTTTCTTTTCAATTGCCAGGGACATTAAGCAAAGGCTTTCAGACACTGATTCCAAGTCAGAGCCTCAAACAATCAAAATAAACAAGCCAGACGCAGGTGGGGGCGATGGTCAAGCCGCTCAAAAGTCAACTTGCTGTGGCTCGTAAAATGGTAGTAGAAGATCAAACCAATTGAAAGAGCGAAAACGCTCTTCATTTCGTGGTGGTGCCTTCTGGGAACAAAATCAAAGAGTCTGGTGAGACTACTGTGGTGGGGCTTTTGTTCATCCATGCTTATGTGTTTGATTGTTTCTTTTTGTTCCTCTACTTTGGCAGAAGACAGTCTGATTTTCCATTTTCTTATTATTATTTTTTTTATATATTGGAGGTTGGGATTTAGGACTCTTCTATTATTTTACGTTACGTGTTGTTGGTGTAGATAGATAATCAAGATTCTTGAAGCATTTTCTTTCTTTAGGAGCAGGGAAGAATGGTGGTCTCTGCTGCATCAGTTGCTCTGTAATTGGGATTATAAGACCCTTTCTTAACGCCCAACTCTAATTGGAATTATTGGATGTTGTTAACTCTTGGACGATGCTAAATCCATGCAATTAATTTCCTTGGCTTGTTGGATTATTTTGTGATTTTATTTTTTTATTCCTTAGATCATGCATATTATACTCAGGTCTCTGTGATGGTTTAGTAACACTTCTAGTTTTTTCATAGTTTTTTCATTAATGAAATTGAGAAAGAAATTGAAAGATCATTTTTTTAGTATGCATATTGATTTCTTGTGGCCTATGATTTTTGTCTTCAATTTGAGGGCAAGCTATTCTTAAAGATGCTCAGAAGGACTTAGATTATTGGAAGATAAATAAGATAGAAAGAAACATTCGGTATCTAGACTGGACGTCACGTGACATGCAGGTTATCGGAGACGATAAAGTATGATACGTTTATCTTCAAACAAATTAAATAGTAAGATGGGTAAATGATAATAGATAAGCAAGTCAGCAGTATCTGAATCTTCATAATCTGGAAATAATTGGTACGA

Coding sequence (CDS)

TTCGTTTCTCTCCCTCTCTCTTCTTTCTCTCTCTTCCCTCTCCCCGTTCGATGTCGCCGACGATTTGCTAAGCTTCGTCAAGGTCGCAGAAGGGAATCGAATTTCGTTGAAGGATACTGGAAACCGATGGCTGCACCACCGGCAAGGGCTCGTGCTGATTACGATTACCTCATTAAGCTTTTGCTTATTGGCGATAGCGGTGTGGGAAAGAGTTGTCTGCTTCTGCGTTTTTCTGATGGTTCTTTCACAACCAGTTTTATCACCACAATTGGTATTGATTTTAAGATACGAACCATTGAGCTTGATGGGAAGAGAATCAAATTGCAAATCTGGGATACAGCTGGTCAGGAACGTTTCCGGACTATCACAACAGCTTACTATCGAGGAGCCATGGGAATTTTGCTGGTTTATGATGTCACTGACGAGTCATCTTTCAACAGTGATTTATTCTTTTCTTATTCAGACATTAGGAATTGGATTCGCAATATTGAACAGCATGCATCTGATAATGTGAACAAGATACTGGTAGGAAATAAGGCTGATATGGATGAAAGTAAAAGGGCTGTGCCTACTTCTAAGGGTCAAGCTCTTGCTGATGAATATGGAATCAAATTCTTTGAAACCAGTGCAAAGACAAACATGAATGTCGAGGAGGTTTTCTTTTCAATTGCCAGGGACATTAAGCAAAGGCTTTCAGACACTGATTCCAAGTCAGAGCCTCAAACAATCAAAATAAACAAGCCAGACGCAGGTGGGGGCGATGGTCAAGCCGCTCAAAAGTCAACTTGCTGTGGCTCGTAA

Protein sequence

FVSLPLSSFSLFPLPVRCRRRFAKLRQGRRRESNFVEGYWKPMAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSDLFFSYSDIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLSDTDSKSEPQTIKINKPDAGGGDGQAAQKSTCCGS

Homology

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BLAST of Carg18320 vs. NCBI nr
Match: KAG7030720.1 (Ras-related protein RABE1c, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 528.9 bits (1361), Expect = 2.6e-146
Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0


Query: 1   FVSLPLSSFSLFPLPVRCRRRFAKLRQGRRRESNFVEGYWKPMAAPPARARADYDYLIKL 60
           FVSLPLSSFSLFPLPVRCRRRFAKLRQGRRRESNFVEGYWKPMAAPPARARADYDYLIKL
Sbjct: 1   FVSLPLSSFSLFPLPVRCRRRFAKLRQGRRRESNFVEGYWKPMAAPPARARADYDYLIKL 60

Query: 61  LLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFR 120
           LLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFR
Sbjct: 61  LLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFR 120

Query: 121 TITTAYYRGAMGILLVYDVTDESSFNSDLFFSYSDIRNWIRNIEQHASDNVNKILVGNKA 180
           TITTAYYRGAMGILLVYDVTDESSFNSDLFFSYSDIRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 121 TITTAYYRGAMGILLVYDVTDESSFNSDLFFSYSDIRNWIRNIEQHASDNVNKILVGNKA 180

Query: 181 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLSDTDSKSEP 240
           DMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLSDTDSKSEP
Sbjct: 181 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLSDTDSKSEP 240

Query: 241 QTIKINKPDAGGGDGQAAQKSTCCGS 267
           QTIKINKPDAGGGDGQAAQKSTCCGS
Sbjct: 241 QTIKINKPDAGGGDGQAAQKSTCCGS 266

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BLAST of Carg18320 vs. NCBI nr
Match: KAG6600049.1 (Ras-related protein RABE1c, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 486.1 bits (1250), Expect = 1.9e-133
Identity = 249/261 (95.40%), Postives = 250/261 (95.79%), Query Frame = 0


Query: 6   LSSFSLFPLPVRCRRRFAKLRQGRRRESNFVEGYWKPMAAPPARARADYDYLIKLLLIGD 65
           LS  SL PLPVRCRRRFAKLRQGRRRESNFVEGYWKPMAAPPARARADYDYLIKLLLIGD
Sbjct: 57  LSLSSLSPLPVRCRRRFAKLRQGRRRESNFVEGYWKPMAAPPARARADYDYLIKLLLIGD 116

Query: 66  SGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTA 125
           SGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTA
Sbjct: 117 SGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTA 176

Query: 126 YYRGAMGILLVYDVTDESSFNSDLFFSYSDIRNWIRNIEQHASDNVNKILVGNKADMDES 185
           YYRGAMGILLVYDVTDESSFN        +IRNWIRNIEQHASDNVNKILVGNKADMDES
Sbjct: 177 YYRGAMGILLVYDVTDESSFN--------NIRNWIRNIEQHASDNVNKILVGNKADMDES 236

Query: 186 KRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLSDTDSKSEPQTIKI 245
           KRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLSDTDSKSEPQTIKI
Sbjct: 237 KRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLSDTDSKSEPQTIKI 296

Query: 246 NKPDAGGGDGQAAQKSTCCGS 267
           NKPDAGGGDGQAAQKSTCCGS
Sbjct: 297 NKPDAGGGDGQAAQKSTCCGS 309

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BLAST of Carg18320 vs. NCBI nr
Match: XP_022943018.1 (ras-related protein RABE1c-like [Cucurbita moschata] >XP_022975876.1 ras-related protein RABE1c-like [Cucurbita maxima] >XP_023532106.1 ras-related protein RABE1c-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 418.3 bits (1074), Expect = 4.9e-113
Identity = 215/224 (95.98%), Postives = 216/224 (96.43%), Query Frame = 0


Query: 43  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 102
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 103 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSDLFFSYSDIRNWIRN 162
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN        +IRNWIRN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN--------NIRNWIRN 120

Query: 163 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFS 222
           IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFS
Sbjct: 121 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFS 180

Query: 223 IARDIKQRLSDTDSKSEPQTIKINKPDAGGGDGQAAQKSTCCGS 267
           IARDIKQRLSDTDSKSEPQTIKINKPDAGGGDGQAAQKSTCCGS
Sbjct: 181 IARDIKQRLSDTDSKSEPQTIKINKPDAGGGDGQAAQKSTCCGS 216

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BLAST of Carg18320 vs. NCBI nr
Match: XP_004147688.1 (ras-related protein RABE1c [Cucumis sativus] >XP_008461674.1 PREDICTED: ras-related protein RABE1c-like [Cucumis melo] >XP_038891057.1 ras-related protein RABE1c-like [Benincasa hispida] >KAA0050319.1 ras-related protein RABE1c-like [Cucumis melo var. makuwa] >KAE8647990.1 hypothetical protein Csa_021425 [Cucumis sativus] >TYK03537.1 ras-related protein RABE1c-like [Cucumis melo var. makuwa])

HSP 1 Score: 408.3 bits (1048), Expect = 5.1e-110
Identity = 209/224 (93.30%), Postives = 213/224 (95.09%), Query Frame = 0


Query: 43  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 102
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 103 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSDLFFSYSDIRNWIRN 162
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN        +IRNWIRN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN--------NIRNWIRN 120

Query: 163 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFS 222
           IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFS
Sbjct: 121 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS 180

Query: 223 IARDIKQRLSDTDSKSEPQTIKINKPDAGGGDGQAAQKSTCCGS 267
           IARDIKQRL+DTDSK+EPQTIKINKPDA  GDGQAAQKS CCGS
Sbjct: 181 IARDIKQRLADTDSKAEPQTIKINKPDAAAGDGQAAQKSACCGS 216

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BLAST of Carg18320 vs. NCBI nr
Match: GAY45171.1 (hypothetical protein CUMW_087490 [Citrus unshiu])

HSP 1 Score: 405.6 bits (1041), Expect = 3.3e-109
Identity = 207/224 (92.41%), Postives = 215/224 (95.98%), Query Frame = 0


Query: 43  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 102
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 103 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSDLFFSYSDIRNWIRN 162
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN+ + F  SDIRNWIRN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNT-VNFLCSDIRNWIRN 120

Query: 163 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFS 222
           IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFS
Sbjct: 121 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS 180

Query: 223 IARDIKQRLSDTDSKSEPQTIKINKPDAGGGDGQAAQKSTCCGS 267
           IARDIKQRL+DTDS++EPQTIKIN+PD  GG  QAAQ+S CCGS
Sbjct: 181 IARDIKQRLADTDSRAEPQTIKINQPDQAGGAAQAAQRSACCGS 223

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BLAST of Carg18320 vs. ExPASy Swiss-Prot
Match: P28186 (Ras-related protein RABE1c OS=Arabidopsis thaliana OX=3702 GN=RABE1C PE=1 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 4.2e-107
Identity = 199/224 (88.84%), Postives = 207/224 (92.41%), Query Frame = 0


Query: 43  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 102
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 103 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSDLFFSYSDIRNWIRN 162
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN        +IRNWIRN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN--------NIRNWIRN 120

Query: 163 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFS 222
           IEQHASDNVNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTN+NVEEVFFS
Sbjct: 121 IEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFS 180

Query: 223 IARDIKQRLSDTDSKSEPQTIKINKPDAGGGDGQAAQKSTCCGS 267
           I RDIKQRLSDTDS++EP TIKI++ D   G GQA QKS CCG+
Sbjct: 181 IGRDIKQRLSDTDSRAEPATIKISQTDQAAGAGQATQKSACCGT 216

[Close]

BLAST of Carg18320 vs. ExPASy Swiss-Prot
Match: O24466 (Ras-related protein RABE1a OS=Arabidopsis thaliana OX=3702 GN=RABE1A PE=1 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 1.2e-106
Identity = 197/224 (87.95%), Postives = 208/224 (92.86%), Query Frame = 0


Query: 43  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 102
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 103 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSDLFFSYSDIRNWIRN 162
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN        +IRNWIRN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN--------NIRNWIRN 120

Query: 163 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFS 222
           IEQHASD+VNKILVGNKADMDESKRAVP SKGQALADEYG+KFFETSAKTN+NVEEVFFS
Sbjct: 121 IEQHASDSVNKILVGNKADMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEVFFS 180

Query: 223 IARDIKQRLSDTDSKSEPQTIKINKPDAGGGDGQAAQKSTCCGS 267
           IA+DIKQRL+DTD+++EPQTIKIN+ D G G  QA QKS CCG+
Sbjct: 181 IAKDIKQRLADTDARAEPQTIKINQSDQGAGTSQATQKSACCGT 216

[Close]

BLAST of Carg18320 vs. ExPASy Swiss-Prot
Match: Q39433 (Ras-related protein RAB1BV OS=Beta vulgaris OX=161934 GN=RAB1BV PE=2 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 2.0e-101
Identity = 195/225 (86.67%), Postives = 203/225 (90.22%), Query Frame = 0


Query: 43  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 102
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 103 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSDLFFSYSDIRNWIRN 162
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN        +IRNWIRN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN--------NIRNWIRN 120

Query: 163 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFS 222
           IEQHASDNVNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTN+NVEEVFFS
Sbjct: 121 IEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFS 180

Query: 223 IARDIKQRLSDTDSKSEPQ-TIKINKPDAGGGDGQAAQKSTCCGS 267
           IARDIKQRL+D+D++ E Q +I I   D  G   QAA KS CCGS
Sbjct: 181 IARDIKQRLADSDTRQEAQPSITIKPADQSG--NQAAAKSACCGS 215

[Close]

BLAST of Carg18320 vs. ExPASy Swiss-Prot
Match: Q9LZD4 (Ras-related protein RABE1d OS=Arabidopsis thaliana OX=3702 GN=RABE1D PE=1 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 7.9e-98
Identity = 183/222 (82.43%), Postives = 197/222 (88.74%), Query Frame = 0


Query: 43  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 102
           MA  PARAR+DYDYLIKLLLIGDSGVGKSCLLLRFSD +FTTSFITTIGIDFKIRT+ELD
Sbjct: 1   MAVAPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELD 60

Query: 103 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSDLFFSYSDIRNWIRN 162
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN        +IRNW++N
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN--------NIRNWMKN 120

Query: 163 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFS 222
           IEQHASDNVNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTN+NVE VF S
Sbjct: 121 IEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVENVFMS 180

Query: 223 IARDIKQRLSDTDSKSEPQTIKINKPDAGGGDGQAAQKSTCC 265
           IA+DIKQRL++TD+K+EPQ IKI K D        A+KS CC
Sbjct: 181 IAKDIKQRLTETDTKAEPQGIKITKQDT-AASSSTAEKSACC 213

[Close]

BLAST of Carg18320 vs. ExPASy Swiss-Prot
Match: Q9SF91 (Ras-related protein RABE1e OS=Arabidopsis thaliana OX=3702 GN=RABE1E PE=1 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 6.7e-97
Identity = 182/223 (81.61%), Postives = 198/223 (88.79%), Query Frame = 0


Query: 43  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 102
           MA  PARAR+DYDYLIKLLLIGDSGVGKSCLLLRFSD +FTTSFITTIGIDFKIRT+ELD
Sbjct: 1   MAVAPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELD 60

Query: 103 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSDLFFSYSDIRNWIRN 162
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN        +IRNW++N
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN--------NIRNWMKN 120

Query: 163 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFS 222
           IEQHASD+VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN NVE+VF S
Sbjct: 121 IEQHASDSVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFLS 180

Query: 223 IARDIKQRLSDTDSKSEPQTIKINKPDAGGGDGQAA-QKSTCC 265
           IA+DIKQRL+++D+K+EPQ IKI K DA      +  +KS CC
Sbjct: 181 IAKDIKQRLTESDTKAEPQGIKITKQDANKASSSSTNEKSACC 215

[Close]

BLAST of Carg18320 vs. ExPASy TrEMBL
Match: A0A0A0KLV7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G182090 PE=4 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 7.6e-120
Identity = 231/266 (86.84%), Postives = 239/266 (89.85%), Query Frame = 0


Query: 3   SLPLSSFSLF--PLPVRCRRRFAKLRQGRRRESNFVEGYWKPMAAPPARARADYDYLIKL 62
           +L   S++LF   L VRCRRR  KL     R+SNFV  YWKPMAAPPARARADYDYLIKL
Sbjct: 21  NLRAKSYNLFFISLCVRCRRRLPKL-----RKSNFVLIYWKPMAAPPARARADYDYLIKL 80

Query: 63  LLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFR 122
           LLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFR
Sbjct: 81  LLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFR 140

Query: 123 TITTAYYRGAMGILLVYDVTDESSFNSDLFFSYSDIRNWIRNIEQHASDNVNKILVGNKA 182
           TITTAYYRGAMGILLVYDVTDESSFN        +IRNWIRNIEQHASDNVNKILVGNKA
Sbjct: 141 TITTAYYRGAMGILLVYDVTDESSFN--------NIRNWIRNIEQHASDNVNKILVGNKA 200

Query: 183 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLSDTDSKSEP 242
           DMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFSIARDIKQRL+DTDSK+EP
Sbjct: 201 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEP 260

Query: 243 QTIKINKPDAGGGDGQAAQKSTCCGS 267
           QTIKINKPDA  GDGQAAQKS CCGS
Sbjct: 261 QTIKINKPDAAAGDGQAAQKSACCGS 273

[Close]

BLAST of Carg18320 vs. ExPASy TrEMBL
Match: A0A6J1IFD7 (ras-related protein RABE1c-like OS=Cucurbita maxima OX=3661 GN=LOC111476448 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 2.4e-113
Identity = 215/224 (95.98%), Postives = 216/224 (96.43%), Query Frame = 0


Query: 43  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 102
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 103 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSDLFFSYSDIRNWIRN 162
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN        +IRNWIRN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN--------NIRNWIRN 120

Query: 163 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFS 222
           IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFS
Sbjct: 121 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFS 180

Query: 223 IARDIKQRLSDTDSKSEPQTIKINKPDAGGGDGQAAQKSTCCGS 267
           IARDIKQRLSDTDSKSEPQTIKINKPDAGGGDGQAAQKSTCCGS
Sbjct: 181 IARDIKQRLSDTDSKSEPQTIKINKPDAGGGDGQAAQKSTCCGS 216

[Close]

BLAST of Carg18320 vs. ExPASy TrEMBL
Match: A0A6J1FW69 (ras-related protein RABE1c-like OS=Cucurbita moschata OX=3662 GN=LOC111447882 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 2.4e-113
Identity = 215/224 (95.98%), Postives = 216/224 (96.43%), Query Frame = 0


Query: 43  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 102
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 103 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSDLFFSYSDIRNWIRN 162
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN        +IRNWIRN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN--------NIRNWIRN 120

Query: 163 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFS 222
           IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFS
Sbjct: 121 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFS 180

Query: 223 IARDIKQRLSDTDSKSEPQTIKINKPDAGGGDGQAAQKSTCCGS 267
           IARDIKQRLSDTDSKSEPQTIKINKPDAGGGDGQAAQKSTCCGS
Sbjct: 181 IARDIKQRLSDTDSKSEPQTIKINKPDAGGGDGQAAQKSTCCGS 216

[Close]

BLAST of Carg18320 vs. ExPASy TrEMBL
Match: A0A5A7U9Z4 (Ras-related protein RABE1c-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00290 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 2.5e-110
Identity = 209/224 (93.30%), Postives = 213/224 (95.09%), Query Frame = 0


Query: 43  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 102
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 103 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSDLFFSYSDIRNWIRN 162
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN        +IRNWIRN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN--------NIRNWIRN 120

Query: 163 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFS 222
           IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFS
Sbjct: 121 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS 180

Query: 223 IARDIKQRLSDTDSKSEPQTIKINKPDAGGGDGQAAQKSTCCGS 267
           IARDIKQRL+DTDSK+EPQTIKINKPDA  GDGQAAQKS CCGS
Sbjct: 181 IARDIKQRLADTDSKAEPQTIKINKPDAAAGDGQAAQKSACCGS 216

[Close]

BLAST of Carg18320 vs. ExPASy TrEMBL
Match: A0A1S3CGK2 (ras-related protein RABE1c-like OS=Cucumis melo OX=3656 GN=LOC103500219 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 2.5e-110
Identity = 209/224 (93.30%), Postives = 213/224 (95.09%), Query Frame = 0


Query: 43  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 102
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 103 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSDLFFSYSDIRNWIRN 162
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN        +IRNWIRN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN--------NIRNWIRN 120

Query: 163 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFS 222
           IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFS
Sbjct: 121 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFS 180

Query: 223 IARDIKQRLSDTDSKSEPQTIKINKPDAGGGDGQAAQKSTCCGS 267
           IARDIKQRL+DTDSK+EPQTIKINKPDA  GDGQAAQKS CCGS
Sbjct: 181 IARDIKQRLADTDSKAEPQTIKINKPDAAAGDGQAAQKSACCGS 216

[Close]

BLAST of Carg18320 vs. TAIR 10
Match: AT3G46060.1 (RAB GTPase homolog 8A )

HSP 1 Score: 389.0 bits (998), Expect = 3.0e-108
Identity = 199/224 (88.84%), Postives = 207/224 (92.41%), Query Frame = 0


Query: 43  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 102
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 103 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSDLFFSYSDIRNWIRN 162
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN        +IRNWIRN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN--------NIRNWIRN 120

Query: 163 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFS 222
           IEQHASDNVNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTN+NVEEVFFS
Sbjct: 121 IEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFS 180

Query: 223 IARDIKQRLSDTDSKSEPQTIKINKPDAGGGDGQAAQKSTCCGS 267
           I RDIKQRLSDTDS++EP TIKI++ D   G GQA QKS CCG+
Sbjct: 181 IGRDIKQRLSDTDSRAEPATIKISQTDQAAGAGQATQKSACCGT 216

[Close]

BLAST of Carg18320 vs. TAIR 10
Match: AT3G46060.2 (RAB GTPase homolog 8A )

HSP 1 Score: 389.0 bits (998), Expect = 3.0e-108
Identity = 199/224 (88.84%), Postives = 207/224 (92.41%), Query Frame = 0


Query: 43  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 102
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 103 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSDLFFSYSDIRNWIRN 162
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN        +IRNWIRN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN--------NIRNWIRN 120

Query: 163 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFS 222
           IEQHASDNVNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTN+NVEEVFFS
Sbjct: 121 IEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFS 180

Query: 223 IARDIKQRLSDTDSKSEPQTIKINKPDAGGGDGQAAQKSTCCGS 267
           I RDIKQRLSDTDS++EP TIKI++ D   G GQA QKS CCG+
Sbjct: 181 IGRDIKQRLSDTDSRAEPATIKISQTDQAAGAGQATQKSACCGT 216

[Close]

BLAST of Carg18320 vs. TAIR 10
Match: AT3G46060.3 (RAB GTPase homolog 8A )

HSP 1 Score: 389.0 bits (998), Expect = 3.0e-108
Identity = 199/224 (88.84%), Postives = 207/224 (92.41%), Query Frame = 0


Query: 43  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 102
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 103 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSDLFFSYSDIRNWIRN 162
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN        +IRNWIRN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN--------NIRNWIRN 120

Query: 163 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFS 222
           IEQHASDNVNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTN+NVEEVFFS
Sbjct: 121 IEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFS 180

Query: 223 IARDIKQRLSDTDSKSEPQTIKINKPDAGGGDGQAAQKSTCCGS 267
           I RDIKQRLSDTDS++EP TIKI++ D   G GQA QKS CCG+
Sbjct: 181 IGRDIKQRLSDTDSRAEPATIKISQTDQAAGAGQATQKSACCGT 216

[Close]

BLAST of Carg18320 vs. TAIR 10
Match: AT5G59840.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 388.3 bits (996), Expect = 5.1e-108
Identity = 199/224 (88.84%), Postives = 207/224 (92.41%), Query Frame = 0


Query: 43  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 102
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 103 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSDLFFSYSDIRNWIRN 162
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN        +IRNWIRN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN--------NIRNWIRN 120

Query: 163 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFS 222
           IEQHASDNVNKILVGNKADMDESKRAVP SKGQALADEYGIKFFETSAKTN+NVEEVFFS
Sbjct: 121 IEQHASDNVNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFS 180

Query: 223 IARDIKQRLSDTDSKSEPQTIKINKPDAGGGDGQAAQKSTCCGS 267
           IA+DIKQRL+DTDS++EP TIKI++ D   G GQA QKS CCGS
Sbjct: 181 IAKDIKQRLADTDSRAEPATIKISQTDQAAGAGQATQKSACCGS 216

[Close]

BLAST of Carg18320 vs. TAIR 10
Match: AT3G53610.1 (RAB GTPase homolog 8 )

HSP 1 Score: 387.5 bits (994), Expect = 8.7e-108
Identity = 197/224 (87.95%), Postives = 208/224 (92.86%), Query Frame = 0


Query: 43  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 102
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 103 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSDLFFSYSDIRNWIRN 162
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN        +IRNWIRN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN--------NIRNWIRN 120

Query: 163 IEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFS 222
           IEQHASD+VNKILVGNKADMDESKRAVP SKGQALADEYG+KFFETSAKTN+NVEEVFFS
Sbjct: 121 IEQHASDSVNKILVGNKADMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEVFFS 180

Query: 223 IARDIKQRLSDTDSKSEPQTIKINKPDAGGGDGQAAQKSTCCGS 267
           IA+DIKQRL+DTD+++EPQTIKIN+ D G G  QA QKS CCG+
Sbjct: 181 IAKDIKQRLADTDARAEPQTIKINQSDQGAGTSQATQKSACCGT 216

The following BLAST results are available for this feature:

BLAST of Carg18320 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7030720.1	2.6e-146	100.00	Ras-related protein RABE1c, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6600049.1	1.9e-133	95.40	Ras-related protein RABE1c, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022943018.1	4.9e-113	95.98	ras-related protein RABE1c-like [Cucurbita moschata] >XP_022975876.1 ras-related...	[more]
XP_004147688.1	5.1e-110	93.30	ras-related protein RABE1c [Cucumis sativus] >XP_008461674.1 PREDICTED: ras-rela...	[more]
GAY45171.1	3.3e-109	92.41	hypothetical protein CUMW_087490 [Citrus unshiu]	[more]

BLAST of Carg18320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P28186	4.2e-107	88.84	Ras-related protein RABE1c OS=Arabidopsis thaliana OX=3702 GN=RABE1C PE=1 SV=1	[more]
O24466	1.2e-106	87.95	Ras-related protein RABE1a OS=Arabidopsis thaliana OX=3702 GN=RABE1A PE=1 SV=1	[more]
Q39433	2.0e-101	86.67	Ras-related protein RAB1BV OS=Beta vulgaris OX=161934 GN=RAB1BV PE=2 SV=1	[more]
Q9LZD4	7.9e-98	82.43	Ras-related protein RABE1d OS=Arabidopsis thaliana OX=3702 GN=RABE1D PE=1 SV=1	[more]
Q9SF91	6.7e-97	81.61	Ras-related protein RABE1e OS=Arabidopsis thaliana OX=3702 GN=RABE1E PE=1 SV=1	[more]

BLAST of Carg18320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLV7	7.6e-120	86.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G182090 PE=4 SV=1	[more]
A0A6J1IFD7	2.4e-113	95.98	ras-related protein RABE1c-like OS=Cucurbita maxima OX=3661 GN=LOC111476448 PE=4...	[more]
A0A6J1FW69	2.4e-113	95.98	ras-related protein RABE1c-like OS=Cucurbita moschata OX=3662 GN=LOC111447882 PE...	[more]
A0A5A7U9Z4	2.5e-110	93.30	Ras-related protein RABE1c-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3CGK2	2.5e-110	93.30	ras-related protein RABE1c-like OS=Cucumis melo OX=3656 GN=LOC103500219 PE=4 SV=...	[more]

BLAST of Carg18320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46060.1	3.0e-108	88.84	RAB GTPase homolog 8A	[more]
AT3G46060.2	3.0e-108	88.84	RAB GTPase homolog 8A	[more]
AT3G46060.3	3.0e-108	88.84	RAB GTPase homolog 8A	[more]
AT5G59840.1	5.1e-108	88.84	Ras-related small GTP-binding family protein	[more]
AT3G53610.1	8.7e-108	87.95	RAB GTPase homolog 8	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 205..227 score: 47.35 coord: 81..97 score: 34.3 coord: 58..79 score: 55.38 coord: 99..121 score: 57.68 coord: 169..182 score: 51.25
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 59..230 e-value: 6.6E-33 score: 125.3
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 63..265 e-value: 2.8E-5 score: 25.7
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 58..230 e-value: 7.7E-101 score: 351.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 231..266
None	No IPR available	PANTHER	PTHR47980	LD44762P	coord: 27..264
None	No IPR available	PANTHER	PTHR47980:SF5	BNAA07G37610D PROTEIN	coord: 27..264
None	No IPR available	PROSITE	PS51419	RAB	coord: 53..264 score: 37.425877
None	No IPR available	PROSITE	PS51420	RHO	coord: 51..228 score: 10.760118
None	No IPR available	CDD	cd01867	Rab8_Rab10_Rab13_like	coord: 55..230 e-value: 2.50448E-119 score: 336.162
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 60..230 e-value: 2.3E-12 score: 38.6
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 59..228 e-value: 9.5E-62 score: 207.4
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 48..266 score: 21.550688
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 51..264 e-value: 1.5E-72 score: 245.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 53..239
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 56..220 e-value: 4.9E-29 score: 99.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18320-RA	Carg18320-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009306	protein secretion
biological_process	GO:0017157	regulation of exocytosis
biological_process	GO:0006904	vesicle docking involved in exocytosis
molecular_function	GO:0003925	G protein activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003924	GTPase activity