Carg18315 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18315
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	dof zinc finger protein DOF3.6-like
Location	Carg_Chr04: 1109912 .. 1111067 (+)
RNA-Seq Expression	Carg18315
Synteny	Carg18315

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCTAGAGAGAGAAAGGCATAAAGTAAAGAAACCCTACTTTGGTGGCCATCTTCTTTCTCTCATTTCCCAGCAAATGTGATTCTCCACCATCACTAACCTTTTACCATGGTTTTCCCTTTGGATCCTCCTCCCAACTGGCCTTCCGTGAGTGGTTTCGAGCCCTACAATTCCCACCTTTTTTTTTTTTTTTTTTTTTAATTTTATTTTATCTGTTCTTGAATATACTCCATCTTTAATCCTGCTTGTTTTTTGGTTTTTCCCAGTTCAATACACAACAAAATAACACTGCTCCGGATTCCGATCAGGTTTTGCTACCTCTGCCACCTTCTGGTGGTGGAGGTGCTGGTGGTGGCGGTGGCGGTGGTGGTGGTGGGTTGATTAGACCGGTTTCGATGACCGATCGTGCTCGGTTGGCGAAGATTCCGCAACCGGAGCCTGGATTAAAATGCCCTAGATGTGAATCTCCCAATACTAAATTCTGTTACTTTAATAACTATAATCTTTCTCAGCCGCGCCACTTTTGCAAGACGTGTCGTCGGTACTGGACGCGTGGTGGTGCGCTGAGGAATGTTCCCGTTGGTGGTGGCTGCCGGAGGAACAAGAGGGCTAAACCCCAGAATCGGTCCAAGTCTCCGACGGCGGGCGAGCGATCGAGCTCCGCTAATTCAACGCCTGCAGTTTCACTTTCAGCTCAACCCCATTTGCCCTTTTTGTCATCTTTACATAATTTCTCTAATTACCTAAACTTGGGGATAATTCCGCCGCCGCCACCTCCAACAAGCAGTGGCGCCGCCGCCGCTGCCGCCGCCGGAGGACCGGATATTCATGAATTTCACGGTGACCATTGGAGATTACAACAACCACAGCAATTCCCTATCTTGGCTAATAATCAACAACCTAATCTACTTTACACTTTCGACCCACCAGAAGGCGCGACGACTCGATACAATCTAAACGAGTTATCGAGATTAGAGATGGAGAACAACGTCGGAATCACGATGGCGGGGACGGTGAAGGTGGAAGAGAGTAAAGCAATGAACTTGGGGAAGAATTTCCAATTCTGGGTCGGTGGCGGCGACACGAATGCTTGGAGCACCGGCGCCGATCTTCACAGCTTCGCTACGTCCTCCGCCGGACACTTATCCAGACAGTAA

mRNA sequence

AATCTAGAGAGAGAAAGGCATAAAGTAAAGAAACCCTACTTTGGTGGCCATCTTCTTTCTCTCATTTCCCAGCAAATGTGATTCTCCACCATCACTAACCTTTTACCATGGTTTTCCCTTTGGATCCTCCTCCCAACTGGCCTTCCTTCAATACACAACAAAATAACACTGCTCCGGATTCCGATCAGGTTTTGCTACCTCTGCCACCTTCTGGTGGTGGAGGTGCTGGTGGTGGCGGTGGCGGTGGTGGTGGTGGGTTGATTAGACCGGTTTCGATGACCGATCGTGCTCGGTTGGCGAAGATTCCGCAACCGGAGCCTGGATTAAAATGCCCTAGATGTGAATCTCCCAATACTAAATTCTGTTACTTTAATAACTATAATCTTTCTCAGCCGCGCCACTTTTGCAAGACGTGTCGTCGGTACTGGACGCGTGGTGGTGCGCTGAGGAATGTTCCCGTTGGTGGTGGCTGCCGGAGGAACAAGAGGGCTAAACCCCAGAATCGGTCCAAGTCTCCGACGGCGGGCGAGCGATCGAGCTCCGCTAATTCAACGCCTGCAGTTTCACTTTCAGCTCAACCCCATTTGCCCTTTTTGTCATCTTTACATAATTTCTCTAATTACCTAAACTTGGGGATAATTCCGCCGCCGCCACCTCCAACAAGCAGTGGCGCCGCCGCCGCTGCCGCCGCCGGAGGACCGGATATTCATGAATTTCACGGTGACCATTGGAGATTACAACAACCACAGCAATTCCCTATCTTGGCTAATAATCAACAACCTAATCTACTTTACACTTTCGACCCACCAGAAGGCGCGACGACTCGATACAATCTAAACGAGTTATCGAGATTAGAGATGGAGAACAACGTCGGAATCACGATGGCGGGGACGGTGAAGGTGGAAGAGAGTAAAGCAATGAACTTGGGGAAGAATTTCCAATTCTGGGTCGGTGGCGGCGACACGAATGCTTGGAGCACCGGCGCCGATCTTCACAGCTTCGCTACGTCCTCCGCCGGACACTTATCCAGACAGTAA

Coding sequence (CDS)

ATGGTTTTCCCTTTGGATCCTCCTCCCAACTGGCCTTCCTTCAATACACAACAAAATAACACTGCTCCGGATTCCGATCAGGTTTTGCTACCTCTGCCACCTTCTGGTGGTGGAGGTGCTGGTGGTGGCGGTGGCGGTGGTGGTGGTGGGTTGATTAGACCGGTTTCGATGACCGATCGTGCTCGGTTGGCGAAGATTCCGCAACCGGAGCCTGGATTAAAATGCCCTAGATGTGAATCTCCCAATACTAAATTCTGTTACTTTAATAACTATAATCTTTCTCAGCCGCGCCACTTTTGCAAGACGTGTCGTCGGTACTGGACGCGTGGTGGTGCGCTGAGGAATGTTCCCGTTGGTGGTGGCTGCCGGAGGAACAAGAGGGCTAAACCCCAGAATCGGTCCAAGTCTCCGACGGCGGGCGAGCGATCGAGCTCCGCTAATTCAACGCCTGCAGTTTCACTTTCAGCTCAACCCCATTTGCCCTTTTTGTCATCTTTACATAATTTCTCTAATTACCTAAACTTGGGGATAATTCCGCCGCCGCCACCTCCAACAAGCAGTGGCGCCGCCGCCGCTGCCGCCGCCGGAGGACCGGATATTCATGAATTTCACGGTGACCATTGGAGATTACAACAACCACAGCAATTCCCTATCTTGGCTAATAATCAACAACCTAATCTACTTTACACTTTCGACCCACCAGAAGGCGCGACGACTCGATACAATCTAAACGAGTTATCGAGATTAGAGATGGAGAACAACGTCGGAATCACGATGGCGGGGACGGTGAAGGTGGAAGAGAGTAAAGCAATGAACTTGGGGAAGAATTTCCAATTCTGGGTCGGTGGCGGCGACACGAATGCTTGGAGCACCGGCGCCGATCTTCACAGCTTCGCTACGTCCTCCGCCGGACACTTATCCAGACAGTAA

Protein sequence

MVFPLDPPPNWPSFNTQQNNTAPDSDQVLLPLPPSGGGGAGGGGGGGGGGLIRPVSMTDRARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRAKPQNRSKSPTAGERSSSANSTPAVSLSAQPHLPFLSSLHNFSNYLNLGIIPPPPPPTSSGAAAAAAAGGPDIHEFHGDHWRLQQPQQFPILANNQQPNLLYTFDPPEGATTRYNLNELSRLEMENNVGITMAGTVKVEESKAMNLGKNFQFWVGGGDTNAWSTGADLHSFATSSAGHLSRQ

Homology

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BLAST of Carg18315 vs. NCBI nr
Match: KAG7030725.1 (Dof zinc finger protein DOF3.6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 634.8 bits (1636), Expect = 3.9e-178
Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 0


Query: 1   MVFPLDPPPNWPSFNTQQNNTAPDSDQVLLPLPPSGGGGAGGGGGGGGGGLIRPVSMTDR 60
           MVFPLDPPPNWPSFNTQQNNTAPDSDQVLLPLPPSGGGGAGGGGGGGGGGLIRPVSMTDR
Sbjct: 1   MVFPLDPPPNWPSFNTQQNNTAPDSDQVLLPLPPSGGGGAGGGGGGGGGGLIRPVSMTDR 60

Query: 61  ARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGG 120
           ARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGG
Sbjct: 61  ARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGG 120

Query: 121 GCRRNKRAKPQNRSKSPTAGERSSSANSTPAVSLSAQPHLPFLSSLHNFSNYLNLGIIPP 180
           GCRRNKRAKPQNRSKSPTAGERSSSANSTPAVSLSAQPHLPFLSSLHNFSNYLNLGIIPP
Sbjct: 121 GCRRNKRAKPQNRSKSPTAGERSSSANSTPAVSLSAQPHLPFLSSLHNFSNYLNLGIIPP 180

Query: 181 PPPPTSSGAAAAAAAGGPDIHEFHGDHWRLQQPQQFPILANNQQPNLLYTFDPPEGATTR 240
           PPPPTSSGAAAAAAAGGPDIHEFHGDHWRLQQPQQFPILANNQQPNLLYTFDPPEGATTR
Sbjct: 181 PPPPTSSGAAAAAAAGGPDIHEFHGDHWRLQQPQQFPILANNQQPNLLYTFDPPEGATTR 240

Query: 241 YNLNELSRLEMENNVGITMAGTVKVEESKAMNLGKNFQFWVGGGDTNAWSTGADLHSFAT 300
           YNLNELSRLEMENNVGITMAGTVKVEESKAMNLGKNFQFWVGGGDTNAWSTGADLHSFAT
Sbjct: 241 YNLNELSRLEMENNVGITMAGTVKVEESKAMNLGKNFQFWVGGGDTNAWSTGADLHSFAT 300

Query: 301 SSAGHLSRQ 310
           SSAGHLSRQ
Sbjct: 301 SSAGHLSRQ 309

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BLAST of Carg18315 vs. NCBI nr
Match: KAG6600054.1 (Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 632.5 bits (1630), Expect = 1.9e-177
Identity = 308/309 (99.68%), Postives = 308/309 (99.68%), Query Frame = 0


Query: 1   MVFPLDPPPNWPSFNTQQNNTAPDSDQVLLPLPPSGGGGAGGGGGGGGGGLIRPVSMTDR 60
           MVFPLDPPPNWPSFNTQQNNTAPDSDQVLLPLPPSGGGGAGGGGGGGGGGLIRPVSMTDR
Sbjct: 1   MVFPLDPPPNWPSFNTQQNNTAPDSDQVLLPLPPSGGGGAGGGGGGGGGGLIRPVSMTDR 60

Query: 61  ARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGG 120
           ARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGG
Sbjct: 61  ARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGG 120

Query: 121 GCRRNKRAKPQNRSKSPTAGERSSSANSTPAVSLSAQPHLPFLSSLHNFSNYLNLGIIPP 180
           GCRRNKRAKPQNRSKSPTAGERSSSANSTPAVSLSAQPHLPFLSSLHNFSNYLNLGIIPP
Sbjct: 121 GCRRNKRAKPQNRSKSPTAGERSSSANSTPAVSLSAQPHLPFLSSLHNFSNYLNLGIIPP 180

Query: 181 PPPPTSSGAAAAAAAGGPDIHEFHGDHWRLQQPQQFPILANNQQPNLLYTFDPPEGATTR 240
           PPPPTSSGAAAAAAAGGPDIHEFHGDHWRLQQPQQFPILANNQQPNLLYTFDPPEGATTR
Sbjct: 181 PPPPTSSGAAAAAAAGGPDIHEFHGDHWRLQQPQQFPILANNQQPNLLYTFDPPEGATTR 240

Query: 241 YNLNELSRLEMENNVGITMAGTVKVEESKAMNLGKNFQFWVGGGDTNAWSTGADLHSFAT 300
           YNLNELSRLEMENNVGITMAGTVKVEESKAMNLGKNFQFWVGG DTNAWSTGADLHSFAT
Sbjct: 241 YNLNELSRLEMENNVGITMAGTVKVEESKAMNLGKNFQFWVGGSDTNAWSTGADLHSFAT 300

Query: 301 SSAGHLSRQ 310
           SSAGHLSRQ
Sbjct: 301 SSAGHLSRQ 309

[Close]

BLAST of Carg18315 vs. NCBI nr
Match: XP_022941607.1 (dof zinc finger protein DOF3.6-like [Cucurbita moschata])

HSP 1 Score: 630.6 bits (1625), Expect = 7.3e-177
Identity = 306/309 (99.03%), Postives = 307/309 (99.35%), Query Frame = 0


Query: 1   MVFPLDPPPNWPSFNTQQNNTAPDSDQVLLPLPPSGGGGAGGGGGGGGGGLIRPVSMTDR 60
           MVFPLDPPPNWPSFNTQQNNTAPDSDQVLLPLPPSGGGG GGGGGGGGGGLIRPVSMTDR
Sbjct: 1   MVFPLDPPPNWPSFNTQQNNTAPDSDQVLLPLPPSGGGGTGGGGGGGGGGLIRPVSMTDR 60

Query: 61  ARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGG 120
           ARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGG
Sbjct: 61  ARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGG 120

Query: 121 GCRRNKRAKPQNRSKSPTAGERSSSANSTPAVSLSAQPHLPFLSSLHNFSNYLNLGIIPP 180
           GCRRNKRAKPQNRSKSPTAGER SSANSTPAVSLSAQPHLPFLSSLHNFSNYLNLGIIPP
Sbjct: 121 GCRRNKRAKPQNRSKSPTAGERPSSANSTPAVSLSAQPHLPFLSSLHNFSNYLNLGIIPP 180

Query: 181 PPPPTSSGAAAAAAAGGPDIHEFHGDHWRLQQPQQFPILANNQQPNLLYTFDPPEGATTR 240
           PPPPTSSGAAAAAAAGGPDIHEFHGDHWRLQQPQQFPILANNQQPN+LYTFDPPEGATTR
Sbjct: 181 PPPPTSSGAAAAAAAGGPDIHEFHGDHWRLQQPQQFPILANNQQPNILYTFDPPEGATTR 240

Query: 241 YNLNELSRLEMENNVGITMAGTVKVEESKAMNLGKNFQFWVGGGDTNAWSTGADLHSFAT 300
           YNLNELSRLEMENNVGITMAGTVKVEESKAMNLGKNFQFWVGGGDTNAWSTGADLHSFAT
Sbjct: 241 YNLNELSRLEMENNVGITMAGTVKVEESKAMNLGKNFQFWVGGGDTNAWSTGADLHSFAT 300

Query: 301 SSAGHLSRQ 310
           SSAGHLSRQ
Sbjct: 301 SSAGHLSRQ 309

[Close]

BLAST of Carg18315 vs. NCBI nr
Match: XP_023546231.1 (dof zinc finger protein DOF2.2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 588.6 bits (1516), Expect = 3.2e-164
Identity = 292/310 (94.19%), Postives = 294/310 (94.84%), Query Frame = 0


Query: 1   MVFPLDPPPNWPSF-NTQQNNTAPDSDQVLLPLPPSGGGGAGGGGGGGGGGLIRPVSMTD 60
           MVFPLDPPPNWPSF N +QNNTA DSDQVLLPLPPSGG   GGGGGGGGGGLIRPVSMTD
Sbjct: 1   MVFPLDPPPNWPSFSNPEQNNTASDSDQVLLPLPPSGG---GGGGGGGGGGLIRPVSMTD 60

Query: 61  RARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVG 120
           RARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVG
Sbjct: 61  RARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVG 120

Query: 121 GGCRRNKRAKPQNRSKSPTAGERSSSANSTPAVSLSAQPHLPFLSSLHNFSNYLNLGIIP 180
           GGCRRNKRAKP NRSKSP A ER SSANSTPAVSLS QPHLPFLSSLHNFSNYLNLGIIP
Sbjct: 121 GGCRRNKRAKPPNRSKSPMASERPSSANSTPAVSLSPQPHLPFLSSLHNFSNYLNLGIIP 180

Query: 181 PPPPPTSSGAAAAAAAGGPDIHEFHGDHWRLQQPQQFPILANNQQPNLLYTFDPPEGATT 240
           PPPPPTSSG    AAAGGPDIHEFHGDHWRLQQPQQFPILANNQQPNLLYTFDPPEGATT
Sbjct: 181 PPPPPTSSG----AAAGGPDIHEFHGDHWRLQQPQQFPILANNQQPNLLYTFDPPEGATT 240

Query: 241 RYNLNELSRLEMENNVGITMAGTVKVEESKAMNLGKNFQFWVGGGDTNAWSTGADLHSFA 300
           RYNLNELSRLEMENNVG+TMAGTVKVEESKAMNLGKNFQFWVGGGDTNAWSTGADLHSF 
Sbjct: 241 RYNLNELSRLEMENNVGMTMAGTVKVEESKAMNLGKNFQFWVGGGDTNAWSTGADLHSFT 300

Query: 301 TSSAGHLSRQ 310
           TSSAGHLSRQ
Sbjct: 301 TSSAGHLSRQ 303

[Close]

BLAST of Carg18315 vs. NCBI nr
Match: XP_022992301.1 (dof zinc finger protein DOF3.6-like [Cucurbita maxima])

HSP 1 Score: 580.1 bits (1494), Expect = 1.1e-161
Identity = 292/311 (93.89%), Postives = 293/311 (94.21%), Query Frame = 0


Query: 1   MVFPLDPPPNWPSF-NTQQNNTAPDSDQVLLPLPPSGGGGAGGGGGGGGGGLIRPVSMTD 60
           MVFPLD PPNWPSF N QQNN APDSDQVLLPLP SGGG  GGGGGGGGGG IRPVSMTD
Sbjct: 1   MVFPLDLPPNWPSFSNPQQNNPAPDSDQVLLPLPSSGGG--GGGGGGGGGGFIRPVSMTD 60

Query: 61  RARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVG 120
           RARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVG
Sbjct: 61  RARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVG 120

Query: 121 GGCRRNKRAKPQNRSKSPTAGERSSSANSTPAVSLSAQPHLPFLSSLHNFSNYLNLGII- 180
           GGCRRNKRAKPQNRSKSPTAGER SSANSTPAVSLSAQPHLPFLSSLHNFSNYLNLGII 
Sbjct: 121 GGCRRNKRAKPQNRSKSPTAGERPSSANSTPAVSLSAQPHLPFLSSLHNFSNYLNLGIIP 180

Query: 181 PPPPPPTSSGAAAAAAAGGPDIHEFHGDHWRLQQPQQFPILANNQQPNLLYTFDPPEGAT 240
           PPPPPPTSSG   AAAAGGPDIHEFHGDHWRLQQPQQFPILANNQQPNLLYTFDPPE AT
Sbjct: 181 PPPPPPTSSG---AAAAGGPDIHEFHGDHWRLQQPQQFPILANNQQPNLLYTFDPPESAT 240

Query: 241 TRYNLNELSRLEMENNVGITMAGTVKVEESKAMNLGKNFQFWVGGGDTNAWSTGADLHSF 300
           TRYNLN LSRLEMENNVG+ MAGTVKVEESKAMNLGKNFQFWVGGGDTN WSTGADLHSF
Sbjct: 241 TRYNLNGLSRLEMENNVGMAMAGTVKVEESKAMNLGKNFQFWVGGGDTNTWSTGADLHSF 300

Query: 301 ATSSAGHLSRQ 310
           ATSSA HLSRQ
Sbjct: 301 ATSSAEHLSRQ 306

[Close]

BLAST of Carg18315 vs. ExPASy Swiss-Prot
Match: O80928 (Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana OX=3702 GN=DOF2.4 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.8e-37
Identity = 79/115 (68.70%), Postives = 90/115 (78.26%), Query Frame = 0


Query: 42  GGGGGGGGGLIRPVSMTDRARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCK 101
           GGGGGGGGG IR  SM DRAR A +  PE  LKCPRCES NTKFCYFNNY+L+QPRHFCK
Sbjct: 58  GGGGGGGGGSIRAGSMVDRARQANVALPEAALKCPRCESTNTKFCYFNNYSLTQPRHFCK 117

Query: 102 TCRRYWTRGGALRNVPVGGGCRRNKRAKP-QNRSKSPTAGERSSSANSTPAVSLS 156
           TCRRYWTRGGALRNVPVGGGCRRN+R K   N + + TA   ++S +S  A ++S
Sbjct: 118 TCRRYWTRGGALRNVPVGGGCRRNRRTKSNSNNNNNSTATSNNTSFSSGNASTIS 172

[Close]

BLAST of Carg18315 vs. ExPASy Swiss-Prot
Match: Q9M2U1 (Dof zinc finger protein DOF3.6 OS=Arabidopsis thaliana OX=3702 GN=DOF3.6 PE=1 SV=2)

HSP 1 Score: 154.8 bits (390), Expect = 1.5e-36
Identity = 114/291 (39.18%), Postives = 146/291 (50.17%), Query Frame = 0


Query: 48  GGGLIRPVSMTDRARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYW 107
           G    R  SM +RAR+AK+P PE  L CPRC+S NTKFCYFNNY+L+QPRHFCKTCRRYW
Sbjct: 51  GSSQARVNSMVERARIAKVPLPEAALNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYW 110

Query: 108 TRGGALRNVPVGGGCRRNKRAKPQNRSKSPTAGERSSSANSTPAVSLSAQPHLPFLSSLH 167
           TRGG+LRNVPVGGG RRNKR+K  +RSKS       S+ N+T   SL+++P     S  H
Sbjct: 111 TRGGSLRNVPVGGGFRRNKRSK--SRSKSTVV---VSTDNTTSTSSLTSRPSYSNPSKFH 170

Query: 168 NFSNYLNLGIIPPPPPPTSS-----GAAAAAAAGGPDIHEFHG---------DHWRL--- 227
           ++          P  PP  S      +      GG  I              D WR+   
Sbjct: 171 SYGQIPEFNSNLPILPPLQSLGDYNSSNTGLDFGGTQISNMISGMSSSGGILDAWRIPPS 230

Query: 228 QQPQQFPILANN----QQPNLLYTFDPPEGATTRYNLNELSRLEME----------NNVG 287
           QQ QQFP L N     Q  N LY     EG  +      +   E +          NN+ 
Sbjct: 231 QQAQQFPFLINTTGLVQSSNALYPL--LEGGVSATQTRNVKAEENDQDRGRDGDGVNNLS 290

Query: 288 ITMAGTVKVEESKAMNLGKNFQFWVGGGDTNAWSTGADLHSFATSSAGHLS 308
               G + +      N G+N ++   GG+ ++W TG      + +S GHLS
Sbjct: 291 RNFLGNINI------NSGRNEEYTSWGGN-SSW-TGFT----SNNSTGHLS 322

[Close]

BLAST of Carg18315 vs. ExPASy Swiss-Prot
Match: Q9LZ56 (Dof zinc finger protein DOF5.1 OS=Arabidopsis thaliana OX=3702 GN=DOF5.1 PE=2 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 6.5e-35
Identity = 87/168 (51.79%), Postives = 101/168 (60.12%), Query Frame = 0


Query: 23  PDSDQVLLPLPPSGGGGAGGGGGGGGGGLIRPVSMTDRARLAKIPQPEPGLKCPRCESPN 82
           P   Q   P      G  G    GG GGLIRP SM +RARLA IP PE  LKCPRC+S N
Sbjct: 45  PPQQQQTPPQLHHNNGNGGVAVPGGPGGLIRPGSMAERARLANIPLPETALKCPRCDSTN 104

Query: 83  TKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRAKPQNRSKSPTAGER 142
           TKFCYFNNY+L+QPRHFCK CRRYWTRGGALR+VPVGGGCRRNKR K  N S        
Sbjct: 105 TKFCYFNNYSLTQPRHFCKACRRYWTRGGALRSVPVGGGCRRNKRTK--NSSGGGGGSTS 164

Query: 143 SSSANSTPAVSLSAQPHLPFL-----------SSLHNFSNYLNLGIIP 180
           S ++ S  + + + Q H   +           SSL +  +  N G+IP
Sbjct: 165 SGNSKSQDSATSNDQYHHRAMANNQMGPPSSSSSLSSLLSSYNAGLIP 210

[Close]

BLAST of Carg18315 vs. ExPASy Swiss-Prot
Match: Q9ZV33 (Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana OX=3702 GN=DOF2.2 PE=2 SV=2)

HSP 1 Score: 147.1 bits (370), Expect = 3.2e-34
Identity = 106/299 (35.45%), Postives = 147/299 (49.16%), Query Frame = 0


Query: 5   LDPPPNWPSFNTQQN-----------NTAPDSDQVLLPLPPSGGGGAGGGGGGGGGGLIR 64
           LDPP NWP      N           +      QVL    P                 + 
Sbjct: 10  LDPPINWPQSANPNNHPHHHQLQENGSLVSGHHQVLSHHFPQNPNPNHHHVETAAATTVD 69

Query: 65  PVSM----TDRARLAKIPQPEPG-LKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWT 124
           P S+     +RARLAK  QP  G LKCPRC+S NTKFCYFNNYNL+QPRHFCK CRRYWT
Sbjct: 70  PSSLNGQAAERARLAKNSQPPEGALKCPRCDSANTKFCYFNNYNLTQPRHFCKACRRYWT 129

Query: 125 RGGALRNVPVGGGCRRNKRAKPQN-------RSKSPTAGERSSSANSTPAVSLSAQPHLP 184
           RGGALRNVPVGGGCRRNK+ K  N       ++K  T+   ++S  +T  V L      P
Sbjct: 130 RGGALRNVPVGGGCRRNKKGKSGNSKSSSSSQNKQSTSMVNATSPTNTSNVQLQTNSQFP 189

Query: 185 FLSSLHNFSNYLNLGIIPPPPPPTSSGAAAAAAAGGPDIHEFHGDHWRLQQPQQFPILAN 244
           FL +L N +    +G+        + G    +++   D+  FHG +         P++ N
Sbjct: 190 FLPTLQNLTQLGGIGLNLAAINGNNGGNGNTSSSFLNDLGFFHGGN------TSGPVMGN 249

Query: 245 NQQPNLLYTFDPPEGATTRYNLNE----LSRLEMENNVGITMAGTVKVEESKAMNLGKN 277
           N + NL+ +     G+++ + L +    L     E N+G++  G  +V ++  + +  N
Sbjct: 250 NNENNLMTSL----GSSSHFALFDRTMGLYNFPNEVNMGLSSIGATRVSQTAQVKMEDN 298

[Close]

BLAST of Carg18315 vs. ExPASy Swiss-Prot
Match: Q8L9V6 (Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana OX=3702 GN=DOF1.1 PE=1 SV=2)

HSP 1 Score: 136.3 bits (342), Expect = 5.7e-31
Identity = 91/227 (40.09%), Postives = 119/227 (52.42%), Query Frame = 0


Query: 56  SMTDRARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRN 115
           SM +RAR A IP     LKCPRC+S NTKFCY+NNYNL+QPRHFCK CRRYWT+GGALRN
Sbjct: 60  SMAERARQANIPPLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRN 119

Query: 116 VPVGGGCRR-NKRAKPQNRSKSPTAGERSSSAN--STPAVSLSAQPHLPFLSSLHNFSNY 175
           VPVGGGCRR NK+ K  N   S ++ ++SSS N  S  +  L      PF  +L+N +  
Sbjct: 120 VPVGGGCRRNNKKGKNGNLKSSSSSSKQSSSVNAQSPSSGQLRTNHQFPFSPTLYNLTQL 179

Query: 176 LNLGIIPPPPPPTSSGAAAAAAAGGPDIHEFHGDHWRLQQPQQFPILA----NNQQPNLL 235
             +G+        +      ++    D+   HG +     P    I      NN + NL+
Sbjct: 180 GGIGLNLAATNGNNQAHQIGSSLMMSDLGFLHGRN--TSTPMTGNIHENNNNNNNENNLM 239

Query: 236 YT---------FDPPEGATTRYNLNELSRLEMENNVGITMAGTVKVE 267
            +         FDP  G     N   +      NNVGI+ + T  V+
Sbjct: 240 ASVGSLSPFALFDPTTGLYAFQNDGNIG-----NNVGISGSSTSMVD 279

[Close]

BLAST of Carg18315 vs. ExPASy TrEMBL
Match: A0A6J1FMY8 (dof zinc finger protein DOF3.6-like OS=Cucurbita moschata OX=3662 GN=LOC111446915 PE=4 SV=1)

HSP 1 Score: 630.6 bits (1625), Expect = 3.5e-177
Identity = 306/309 (99.03%), Postives = 307/309 (99.35%), Query Frame = 0


Query: 1   MVFPLDPPPNWPSFNTQQNNTAPDSDQVLLPLPPSGGGGAGGGGGGGGGGLIRPVSMTDR 60
           MVFPLDPPPNWPSFNTQQNNTAPDSDQVLLPLPPSGGGG GGGGGGGGGGLIRPVSMTDR
Sbjct: 1   MVFPLDPPPNWPSFNTQQNNTAPDSDQVLLPLPPSGGGGTGGGGGGGGGGLIRPVSMTDR 60

Query: 61  ARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGG 120
           ARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGG
Sbjct: 61  ARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGG 120

Query: 121 GCRRNKRAKPQNRSKSPTAGERSSSANSTPAVSLSAQPHLPFLSSLHNFSNYLNLGIIPP 180
           GCRRNKRAKPQNRSKSPTAGER SSANSTPAVSLSAQPHLPFLSSLHNFSNYLNLGIIPP
Sbjct: 121 GCRRNKRAKPQNRSKSPTAGERPSSANSTPAVSLSAQPHLPFLSSLHNFSNYLNLGIIPP 180

Query: 181 PPPPTSSGAAAAAAAGGPDIHEFHGDHWRLQQPQQFPILANNQQPNLLYTFDPPEGATTR 240
           PPPPTSSGAAAAAAAGGPDIHEFHGDHWRLQQPQQFPILANNQQPN+LYTFDPPEGATTR
Sbjct: 181 PPPPTSSGAAAAAAAGGPDIHEFHGDHWRLQQPQQFPILANNQQPNILYTFDPPEGATTR 240

Query: 241 YNLNELSRLEMENNVGITMAGTVKVEESKAMNLGKNFQFWVGGGDTNAWSTGADLHSFAT 300
           YNLNELSRLEMENNVGITMAGTVKVEESKAMNLGKNFQFWVGGGDTNAWSTGADLHSFAT
Sbjct: 241 YNLNELSRLEMENNVGITMAGTVKVEESKAMNLGKNFQFWVGGGDTNAWSTGADLHSFAT 300

Query: 301 SSAGHLSRQ 310
           SSAGHLSRQ
Sbjct: 301 SSAGHLSRQ 309

[Close]

BLAST of Carg18315 vs. ExPASy TrEMBL
Match: A0A6J1JT69 (dof zinc finger protein DOF3.6-like OS=Cucurbita maxima OX=3661 GN=LOC111488655 PE=4 SV=1)

HSP 1 Score: 580.1 bits (1494), Expect = 5.5e-162
Identity = 292/311 (93.89%), Postives = 293/311 (94.21%), Query Frame = 0


Query: 1   MVFPLDPPPNWPSF-NTQQNNTAPDSDQVLLPLPPSGGGGAGGGGGGGGGGLIRPVSMTD 60
           MVFPLD PPNWPSF N QQNN APDSDQVLLPLP SGGG  GGGGGGGGGG IRPVSMTD
Sbjct: 1   MVFPLDLPPNWPSFSNPQQNNPAPDSDQVLLPLPSSGGG--GGGGGGGGGGFIRPVSMTD 60

Query: 61  RARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVG 120
           RARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVG
Sbjct: 61  RARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVG 120

Query: 121 GGCRRNKRAKPQNRSKSPTAGERSSSANSTPAVSLSAQPHLPFLSSLHNFSNYLNLGII- 180
           GGCRRNKRAKPQNRSKSPTAGER SSANSTPAVSLSAQPHLPFLSSLHNFSNYLNLGII 
Sbjct: 121 GGCRRNKRAKPQNRSKSPTAGERPSSANSTPAVSLSAQPHLPFLSSLHNFSNYLNLGIIP 180

Query: 181 PPPPPPTSSGAAAAAAAGGPDIHEFHGDHWRLQQPQQFPILANNQQPNLLYTFDPPEGAT 240
           PPPPPPTSSG   AAAAGGPDIHEFHGDHWRLQQPQQFPILANNQQPNLLYTFDPPE AT
Sbjct: 181 PPPPPPTSSG---AAAAGGPDIHEFHGDHWRLQQPQQFPILANNQQPNLLYTFDPPESAT 240

Query: 241 TRYNLNELSRLEMENNVGITMAGTVKVEESKAMNLGKNFQFWVGGGDTNAWSTGADLHSF 300
           TRYNLN LSRLEMENNVG+ MAGTVKVEESKAMNLGKNFQFWVGGGDTN WSTGADLHSF
Sbjct: 241 TRYNLNGLSRLEMENNVGMAMAGTVKVEESKAMNLGKNFQFWVGGGDTNTWSTGADLHSF 300

Query: 301 ATSSAGHLSRQ 310
           ATSSA HLSRQ
Sbjct: 301 ATSSAEHLSRQ 306

[Close]

BLAST of Carg18315 vs. ExPASy TrEMBL
Match: A0A0A0KQ92 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G182030 PE=4 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 3.3e-122
Identity = 241/328 (73.48%), Postives = 256/328 (78.05%), Query Frame = 0


Query: 1   MVFPLDP----PPNWPSFNTQQ---NNTAPDSDQVLLPLPPSGGGGAGGGGGGGGGGLIR 60
           MVFP  P    PPNW      Q   N+TA DS QVLLP PP   GG GGG GGGG G IR
Sbjct: 1   MVFPPLPSYLDPPNWQPLTNHQTGGNDTAEDSGQVLLPPPP---GGGGGGDGGGGTGSIR 60

Query: 61  PVSMTDRARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGAL 120
           PVSMTDRARLAKIPQPE GLKCPRCES NTKFCYFNNYNLSQPRHFCKTCRRYWTRGGAL
Sbjct: 61  PVSMTDRARLAKIPQPEAGLKCPRCESTNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGAL 120

Query: 121 RNVPVGGGCRRNKRAKPQNRSKSPTAGER---SSSANSTPAVSLSAQPHLPFLSSLHNFS 180
           RNVPVGGGCRRNKR K +NRSKSP A ER     S NST AVSLS QPHLPFLSSLHNFS
Sbjct: 121 RNVPVGGGCRRNKRTKSRNRSKSPAASERQLLGGSTNSTAAVSLSTQPHLPFLSSLHNFS 180

Query: 181 NY-LNLGIIPPPPPPTSSGAAAAAAAGGPDIHEFHGDHWRLQQPQQFPILANNQQPNLLY 240
            Y LNLGIIPP  PPTS G    +AAGG D+HEF GDHWRLQ PQQFP+LAN+QQPNLLY
Sbjct: 181 TYGLNLGIIPPQAPPTSGG----SAAGGVDVHEFQGDHWRLQPPQQFPLLANDQQPNLLY 240

Query: 241 TFDPPEGATTRYNLNELSRLEMENNVGITM-AGTVKVEESKAMNLGKNFQFWVGGG---D 300
           TF+PPEGA  RYNL   SRL +EN++G+TM +G VKVEESK MNLGKNFQFWVGGG   D
Sbjct: 241 TFEPPEGAMARYNLGGFSRLGIENDIGMTMESGAVKVEESKGMNLGKNFQFWVGGGGGND 300

Query: 301 TNAW----STGADLHSFATSSAGHLSRQ 310
            NAW    S GADLH F+++SA HL RQ
Sbjct: 301 VNAWSGGGSGGADLHGFSSASASHLLRQ 321

[Close]

BLAST of Carg18315 vs. ExPASy TrEMBL
Match: A0A1S3CF93 (dof zinc finger protein DOF2.4 OS=Cucumis melo OX=3656 GN=LOC103500213 PE=4 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 2.3e-120
Identity = 238/328 (72.56%), Postives = 255/328 (77.74%), Query Frame = 0


Query: 1   MVFPLDP----PPNWPSFNTQQ---NNTAPDSDQVLLPLPPSGGGGAGGGGGGGGGGLIR 60
           MVFP  P    PPNW      Q   N+TA DS QVLLP PP GGGG G   GGG  G IR
Sbjct: 1   MVFPPLPSYLDPPNWQPLTNHQTGGNDTAEDSGQVLLP-PPPGGGGGGESAGGGSTGSIR 60

Query: 61  PVSMTDRARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGAL 120
           P+SMTDRARLAKIPQPE GLKCPRCES NTKFCYFNNYNLSQPRHFCKTCRRYWTRGGAL
Sbjct: 61  PISMTDRARLAKIPQPEAGLKCPRCESTNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGAL 120

Query: 121 RNVPVGGGCRRNKRAKPQNRSKSPTAGERS---SSANSTPAVSLSAQPHLPFLSSLHNFS 180
           RNVPVGGGCRRNKR K +NRSKSP A ER     S NST AVSLS QPHLPFLSSL NFS
Sbjct: 121 RNVPVGGGCRRNKRTKSRNRSKSPAASERQLLVGSTNSTAAVSLSTQPHLPFLSSLQNFS 180

Query: 181 NY-LNLGIIPPPPPPTSSGAAAAAAAGGPDIHEFHGDHWRLQQPQQFPILANNQQPNLLY 240
            Y LNLGIIPP  PPTS G    +AAGG D+HEF GDHWRLQQPQQFP+LAN+QQPNLLY
Sbjct: 181 TYGLNLGIIPPQAPPTSGG----SAAGGVDVHEFQGDHWRLQQPQQFPLLANDQQPNLLY 240

Query: 241 TFDPPEGATTRYNLNELSRLEMENNVGITMAG-TVKVEESKAMNLGKNFQFWVGGG---D 300
           TF+PPEGA TRYNL   SRL +EN++G++M G  VKVEESK MNLGKNFQFWVGGG   D
Sbjct: 241 TFEPPEGAMTRYNLGGFSRLGIENDIGMSMEGEAVKVEESKGMNLGKNFQFWVGGGGGND 300

Query: 301 TNAW----STGADLHSFATSSAGHLSRQ 310
            NAW    S G++LH F++SSA HL RQ
Sbjct: 301 VNAWSGGGSGGSELHGFSSSSASHLLRQ 323

[Close]

BLAST of Carg18315 vs. ExPASy TrEMBL
Match: A0A6J1JMX1 (dof zinc finger protein DOF2.4-like OS=Cucurbita maxima OX=3661 GN=LOC111487286 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 2.8e-113
Identity = 233/336 (69.35%), Postives = 249/336 (74.11%), Query Frame = 0


Query: 1   MVFPLDP----PPNWPSFNTQQ---NNTAPDSDQVLLPLPPSGGGGAGGG------GGGG 60
           MVFP  P    PPNW     QQ   N+T  DS QVLLP    GGGG+GGG      GGG 
Sbjct: 1   MVFPSFPSYLDPPNWQPLTNQQPGGNDTTCDSSQVLLP----GGGGSGGGGDGDGDGGGS 60

Query: 61  GGGLIRPVSMTDRARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYW 120
           G G IRPVSMTDRARLAKIPQPE GLKCPRCES NTKFCYFNNYNLSQPRHFCK CRRYW
Sbjct: 61  GVGSIRPVSMTDRARLAKIPQPEAGLKCPRCESANTKFCYFNNYNLSQPRHFCKACRRYW 120

Query: 121 TRGGALRNVPVGGGCRRNKRAKPQNRSKSPTAGER---SSSANSTPAVSLSAQPHLPFLS 180
           TRGGALRNVPVGGGCRRNKR K +NRSKSP  GER   + SANST  VSLS   HLPFLS
Sbjct: 121 TRGGALRNVPVGGGCRRNKRTKSRNRSKSPAGGERQLLAGSANSTAGVSLSTPTHLPFLS 180

Query: 181 SLHNFSNY-LNLGIIPPPPPPTSSGAAAAAAAGGPDIHEFHGDHWRLQ--QPQQFPILAN 240
           SLHNF+NY LNLGIIPP PPPTS G    +  GG D+HEF  DHWRLQ  QPQQFP+L N
Sbjct: 181 SLHNFTNYGLNLGIIPPQPPPTSGG----STTGGVDVHEFQADHWRLQPPQPQQFPLLPN 240

Query: 241 NQQPNLLYTFDPPEGATTRYNLNELSRLEMENNVGITM-AGTVKVEESKAMNLGKNFQFW 300
           +QQPNLLYTF+PPE   TRYNL   SRL +E++VG+T  A  VKVEESK M LGKNFQFW
Sbjct: 241 DQQPNLLYTFEPPEATATRYNLGLFSRLGIESDVGMTTEAEVVKVEESKGMTLGKNFQFW 300

Query: 301 VGGG---DTNAWS----TGADLHSFATSSAGHLSRQ 310
           VGGG   D +AWS     G DLH F +SSAGHL RQ
Sbjct: 301 VGGGGGNDVSAWSGSGGGGGDLHGFTSSSAGHLLRQ 328

[Close]

BLAST of Carg18315 vs. TAIR 10
Match: AT2G37590.1 (DNA binding with one finger 2.4 )

HSP 1 Score: 157.9 bits (398), Expect = 1.3e-38
Identity = 79/115 (68.70%), Postives = 90/115 (78.26%), Query Frame = 0


Query: 42  GGGGGGGGGLIRPVSMTDRARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCK 101
           GGGGGGGGG IR  SM DRAR A +  PE  LKCPRCES NTKFCYFNNY+L+QPRHFCK
Sbjct: 58  GGGGGGGGGSIRAGSMVDRARQANVALPEAALKCPRCESTNTKFCYFNNYSLTQPRHFCK 117

Query: 102 TCRRYWTRGGALRNVPVGGGCRRNKRAKP-QNRSKSPTAGERSSSANSTPAVSLS 156
           TCRRYWTRGGALRNVPVGGGCRRN+R K   N + + TA   ++S +S  A ++S
Sbjct: 118 TCRRYWTRGGALRNVPVGGGCRRNRRTKSNSNNNNNSTATSNNTSFSSGNASTIS 172

[Close]

BLAST of Carg18315 vs. TAIR 10
Match: AT2G28810.2 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 155.2 bits (391), Expect = 8.4e-38
Identity = 92/230 (40.00%), Postives = 130/230 (56.52%), Query Frame = 0


Query: 59  DRARLAKIPQPEPG-LKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVP 118
           +RARLAK  QP  G LKCPRC+S NTKFCYFNNYNL+QPRHFCK CRRYWTRGGALRNVP
Sbjct: 62  ERARLAKNSQPPEGALKCPRCDSANTKFCYFNNYNLTQPRHFCKACRRYWTRGGALRNVP 121

Query: 119 VGGGCRRNKRAKPQN-------RSKSPTAGERSSSANSTPAVSLSAQPHLPFLSSLHNFS 178
           VGGGCRRNK+ K  N       ++K  T+   ++S  +T  V L      PFL +L N +
Sbjct: 122 VGGGCRRNKKGKSGNSKSSSSSQNKQSTSMVNATSPTNTSNVQLQTNSQFPFLPTLQNLT 181

Query: 179 NYLNLGIIPPPPPPTSSGAAAAAAAGGPDIHEFHGDHWRLQQPQQFPILANNQQPNLLYT 238
               +G+        + G    +++   D+  FHG +         P++ NN + NL+ +
Sbjct: 182 QLGGIGLNLAAINGNNGGNGNTSSSFLNDLGFFHGGN------TSGPVMGNNNENNLMTS 241

Query: 239 FDPPEGATTRYNLNE----LSRLEMENNVGITMAGTVKVEESKAMNLGKN 277
                G+++ + L +    L     E N+G++  G  +V ++  + +  N
Sbjct: 242 L----GSSSHFALFDRTMGLYNFPNEVNMGLSSIGATRVSQTAQVKMEDN 281

[Close]

BLAST of Carg18315 vs. TAIR 10
Match: AT3G55370.1 (OBF-binding protein 3 )

HSP 1 Score: 154.8 bits (390), Expect = 1.1e-37
Identity = 114/291 (39.18%), Postives = 146/291 (50.17%), Query Frame = 0


Query: 48  GGGLIRPVSMTDRARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYW 107
           G    R  SM +RAR+AK+P PE  L CPRC+S NTKFCYFNNY+L+QPRHFCKTCRRYW
Sbjct: 51  GSSQARVNSMVERARIAKVPLPEAALNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYW 110

Query: 108 TRGGALRNVPVGGGCRRNKRAKPQNRSKSPTAGERSSSANSTPAVSLSAQPHLPFLSSLH 167
           TRGG+LRNVPVGGG RRNKR+K  +RSKS       S+ N+T   SL+++P     S  H
Sbjct: 111 TRGGSLRNVPVGGGFRRNKRSK--SRSKSTVV---VSTDNTTSTSSLTSRPSYSNPSKFH 170

Query: 168 NFSNYLNLGIIPPPPPPTSS-----GAAAAAAAGGPDIHEFHG---------DHWRL--- 227
           ++          P  PP  S      +      GG  I              D WR+   
Sbjct: 171 SYGQIPEFNSNLPILPPLQSLGDYNSSNTGLDFGGTQISNMISGMSSSGGILDAWRIPPS 230

Query: 228 QQPQQFPILANN----QQPNLLYTFDPPEGATTRYNLNELSRLEME----------NNVG 287
           QQ QQFP L N     Q  N LY     EG  +      +   E +          NN+ 
Sbjct: 231 QQAQQFPFLINTTGLVQSSNALYPL--LEGGVSATQTRNVKAEENDQDRGRDGDGVNNLS 290

Query: 288 ITMAGTVKVEESKAMNLGKNFQFWVGGGDTNAWSTGADLHSFATSSAGHLS 308
               G + +      N G+N ++   GG+ ++W TG      + +S GHLS
Sbjct: 291 RNFLGNINI------NSGRNEEYTSWGGN-SSW-TGFT----SNNSTGHLS 322

[Close]

BLAST of Carg18315 vs. TAIR 10
Match: AT3G55370.3 (OBF-binding protein 3 )

HSP 1 Score: 154.8 bits (390), Expect = 1.1e-37
Identity = 114/291 (39.18%), Postives = 146/291 (50.17%), Query Frame = 0


Query: 48  GGGLIRPVSMTDRARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYW 107
           G    R  SM +RAR+AK+P PE  L CPRC+S NTKFCYFNNY+L+QPRHFCKTCRRYW
Sbjct: 96  GSSQARVNSMVERARIAKVPLPEAALNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYW 155

Query: 108 TRGGALRNVPVGGGCRRNKRAKPQNRSKSPTAGERSSSANSTPAVSLSAQPHLPFLSSLH 167
           TRGG+LRNVPVGGG RRNKR+K  +RSKS       S+ N+T   SL+++P     S  H
Sbjct: 156 TRGGSLRNVPVGGGFRRNKRSK--SRSKSTVV---VSTDNTTSTSSLTSRPSYSNPSKFH 215

Query: 168 NFSNYLNLGIIPPPPPPTSS-----GAAAAAAAGGPDIHEFHG---------DHWRL--- 227
           ++          P  PP  S      +      GG  I              D WR+   
Sbjct: 216 SYGQIPEFNSNLPILPPLQSLGDYNSSNTGLDFGGTQISNMISGMSSSGGILDAWRIPPS 275

Query: 228 QQPQQFPILANN----QQPNLLYTFDPPEGATTRYNLNELSRLEME----------NNVG 287
           QQ QQFP L N     Q  N LY     EG  +      +   E +          NN+ 
Sbjct: 276 QQAQQFPFLINTTGLVQSSNALYPL--LEGGVSATQTRNVKAEENDQDRGRDGDGVNNLS 335

Query: 288 ITMAGTVKVEESKAMNLGKNFQFWVGGGDTNAWSTGADLHSFATSSAGHLS 308
               G + +      N G+N ++   GG+ ++W TG      + +S GHLS
Sbjct: 336 RNFLGNINI------NSGRNEEYTSWGGN-SSW-TGFT----SNNSTGHLS 367

[Close]

BLAST of Carg18315 vs. TAIR 10
Match: AT3G55370.2 (OBF-binding protein 3 )

HSP 1 Score: 152.5 bits (384), Expect = 5.4e-37
Identity = 95/203 (46.80%), Postives = 113/203 (55.67%), Query Frame = 0


Query: 48  GGGLIRPVSMTDRARLAKIPQPEPGLKCPRCESPNTKFCYFNNYNLSQPRHFCKTCRRYW 107
           G    R  SM +RAR+AK+P PE  L CPRC+S NTKFCYFNNY+L+QPRHFCKTCRRYW
Sbjct: 51  GSSQARVNSMVERARIAKVPLPEAALNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYW 110

Query: 108 TRGGALRNVPVGGGCRRNKRAKPQNRSKSPTAGERSSSANSTPAVSLSAQPHLPFLSSLH 167
           TRGG+LRNVPVGGG RRNKR+K  +RSKS       S+ N+T   SL+++P     S  H
Sbjct: 111 TRGGSLRNVPVGGGFRRNKRSK--SRSKSTVV---VSTDNTTSTSSLTSRPSYSNPSKFH 170

Query: 168 NFSNYLNLGIIPPPPPPTSS-----GAAAAAAAGGPDIHEFHG---------DHWRL--- 227
           ++          P  PP  S      +      GG  I              D WR+   
Sbjct: 171 SYGQIPEFNSNLPILPPLQSLGDYNSSNTGLDFGGTQISNMISGMSSSGGILDAWRIPPS 230

Query: 228 QQPQQFPILANN----QQPNLLY 230
           QQ QQFP L N     Q  N LY
Sbjct: 231 QQAQQFPFLINTTGLVQSSNALY 248

The following BLAST results are available for this feature:

BLAST of Carg18315 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7030725.1	3.9e-178	100.00	Dof zinc finger protein DOF3.6 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6600054.1	1.9e-177	99.68	Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022941607.1	7.3e-177	99.03	dof zinc finger protein DOF3.6-like [Cucurbita moschata]	[more]
XP_023546231.1	3.2e-164	94.19	dof zinc finger protein DOF2.2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022992301.1	1.1e-161	93.89	dof zinc finger protein DOF3.6-like [Cucurbita maxima]	[more]

BLAST of Carg18315 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80928	1.8e-37	68.70	Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana OX=3702 GN=DOF2.4 PE=2 SV...	[more]
Q9M2U1	1.5e-36	39.18	Dof zinc finger protein DOF3.6 OS=Arabidopsis thaliana OX=3702 GN=DOF3.6 PE=1 SV...	[more]
Q9LZ56	6.5e-35	51.79	Dof zinc finger protein DOF5.1 OS=Arabidopsis thaliana OX=3702 GN=DOF5.1 PE=2 SV...	[more]
Q9ZV33	3.2e-34	35.45	Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana OX=3702 GN=DOF2.2 PE=2 SV...	[more]
Q8L9V6	5.7e-31	40.09	Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana OX=3702 GN=DOF1.1 PE=1 SV...	[more]

BLAST of Carg18315 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FMY8	3.5e-177	99.03	dof zinc finger protein DOF3.6-like OS=Cucurbita moschata OX=3662 GN=LOC11144691...	[more]
A0A6J1JT69	5.5e-162	93.89	dof zinc finger protein DOF3.6-like OS=Cucurbita maxima OX=3661 GN=LOC111488655 ...	[more]
A0A0A0KQ92	3.3e-122	73.48	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G182030 PE...	[more]
A0A1S3CF93	2.3e-120	72.56	dof zinc finger protein DOF2.4 OS=Cucumis melo OX=3656 GN=LOC103500213 PE=4 SV=1	[more]
A0A6J1JMX1	2.8e-113	69.35	dof zinc finger protein DOF2.4-like OS=Cucurbita maxima OX=3661 GN=LOC111487286 ...	[more]

BLAST of Carg18315 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37590.1	1.3e-38	68.70	DNA binding with one finger 2.4	[more]
AT2G28810.2	8.4e-38	40.00	Dof-type zinc finger DNA-binding family protein	[more]
AT3G55370.1	1.1e-37	39.18	OBF-binding protein 3	[more]
AT3G55370.3	1.1e-37	39.18	OBF-binding protein 3	[more]
AT3G55370.2	5.4e-37	46.80	OBF-binding protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 73..127 e-value: 1.2E-31 score: 108.6
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 75..111
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 73..127 score: 29.608751
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..47
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 13..302
None	No IPR available	PANTHER	PTHR31992:SF222	DOF DOMAIN ZINC FINGER PROTEIN	coord: 13..302

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18315-RA	Carg18315-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding