Carg17906 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg17906
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	DNA mismatch repair protein MSH2
Location	Carg_Chr10: 1121558 .. 1130388 (-)
RNA-Seq Expression	Carg17906
Synteny	Carg17906

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCACAACAAGGCGAAGAAACAAAGCCATAATTGAAAGCTTCAAACGAAACAGAAGAAATGGATGAAAATGTCGATGAGCAAAGCAAGCTTCCCGAGCTCAAACTTGGTACAGTCTACAAAATCGTCGTTTTTTTTTTTTTCTCGTTCTCATTCTGCATATTAGTTTTTTGAGTTATTTTTAATCCATTTGGTTGAAATGTTGACAGATGCTAAACAGGCTCAAGGGTTTCTCGCATTCTTCAAAACCCTACCCCCCGTAAGTTTTTATTGCAAGTTGGTTTCGCACTTTCGTGACTGAAATTTTAGTGATTGCTCTGAGAACTCTGGTAAAATGTAGAGGAATCTAGATGGAAGTTACCTATTCCTTCTGCATAAGGTCGTTGCTTAATATTCCGTAGTTCCCTGGCCTGCGCGTGGATAAGTTGATGTTACTGGAACTGGGTGCTTAGCGAAGCAGGATAGAAGGACGTTAATTGGATGCTTAATTAACTATAATAGGGAGAATCGTGATTATTTAGAAACTCCTGTAGCTGAGGTTATGTTACTTAATTTAATTGCATGTTTCTGCTGCAGGACTCGAGAGCTGTTCGATTTTTTGATCGTCGGGTCAGTTATTTAATCCTTTCCTTTCATTCGTTAATTTTGTTCAGATGCCATTTGTTGAATTGGGATCTGGTTATCGCCCCCTTGATGCTATTTGAATGGAATATACCATTTGAAACTCAGTCGACTTTTCTTTCTTATCATCATGTCTGTGAAGCAATTTGCGTTTTATCAGAGTGCAATGCTGTTTCATTGTATTTATCCTTTAGTAGCTGGAATTGAATATGCTCTTGTTCACATGCCTCTATTTGATCTCATCTTGGATTGAATTTGATATACGCATGCATATGTAGCCATAATTACCTTCCTCCGTGAATTCGATCGTACAGGATTACTATACTGTCCATGGTGATAGTGCAGTTTTCATTGCAAAGACCTATTACCGTACTACAACTGCTTTACGACAACTGGGCAATGCATCTGAAGCTCTGTCTAGTGTGAGTGTCAGCAAAAATATGTTTGAATCCATTGCCCGGGATCTTCTTTTGGAAAGAATGGACCATACATTGGAGCTTTATGAGGGCAGTGGTTCCAATTGGAGACTGATCAAAAGTGGTTCACCTGGTAATATTGGCAGTTTTGAAGACGTTTTGTTTGCAAATAATGAAATGCAGGACAGCCCTGCTATTGTGGCACTATTACCGAACTTCCGAGAAAATGGGTGCATTGTTGGACTAGCCTACGTTGATTTAACAAAAAGGTTGATGGGGTTGGCTGAATTTCTAGACGATAGCCATTTTACAAATGTGGAGTCAGCTCTGGTTGGTCTCGGTTGTAAGGAATGCCTTCTGCCTCTAGACAGTGGAAAGTTCGGTGATTTAAAACCTCTACATGATGCATTGACAAAGTGTGGTGTGATGTTAACTGAGAGAAAAAAATCAGAATTTAAAATGAGAGATTTGGTGCAGGATCTTTCAAGGCTTGTCAAAGGTTCTGTTGAACCTGTTAGAGATATGGTATCTGGATTTGAATTTGCGCCTGCTGCCTTAGGAGCATTGCTGGCTTATGCAGAATTACTGGCAGATGAAAGCAATTATGGAAACTACAACATCCAGAAATACAATCTTGATAGCTACATGAGGTTAGACTCTGCTGCCATGAGAGCATTAAATGTCCTAGAAAGTAAAACTGATGCAAACAAAAACTTCAGCCTGTTTGGTCTCATGAATAGAACCTGTACTGCTGGAATGGGTAAAAGATTGCTTCATATGTGGCTAAAACAGCCTCTGTTAGACGTCAAAGAAATTAATTCTAGACTGGATCTTGTTCAAGCATTTGTGGAGGATACTGCTCTCCGCCAGGATTTGAGACAACATCTCAAAAGAATCTCAGATATTGAACGATTGACACAGTATCTCGAGAAGAGAAGAGCTGGATTACAGCACATTGTTAAACTTTATCAGGTATAGATTTAAATGAACCACTGACAATTAGTATTAATTGAAATAATTTCTTATAAATGGTTTGGATAATGAGATGAAAATTGTTAATCTTGGCACTGGGTTAATGTTGATTCTTGCACTATCATGAATAAATTGCTACCTGTTTTCATTGTGAGATTTATGTTTTATAGTAATTTGTGCTTTGTCCATATTGCTCTGATATTTGGACTTTCATCATTATAATGTAGTCAAGTATAAGGCTTCCATTCATTAAAAATGCCTTGGAGAATTATGAAGGACAATTTTCCTCACTTATCAAGGAGAAGTACATGGAATGTCTTGAGATCTGGACTGACAACGATCATCTGAACAAGTTCAATAATCTTGTGGAAACTGCTGTTGATCTTGATCAGCTTGAGAATGGAGAATATATGATTTCATCTAGTTACGACCCTGCTCTGTCCAAGTTGAAGAATGTGCAGGAATCGATAGAGCAGCAAATACAGGATTTGCATAGGCAGGTTGCTAATGATCTTGATCTTGCAGTTGATAAGGCTTTGAAGTTAGACAAAGGTACACAATTTGGACATGTTTTTAGAATTACTAAGAAAGAAGAACCAAAAGTAAGGAAAAAGCTCTCCACCCACTTCATTGTCCTTGAAACCCGAAAAGATGGAGTGAAGTTTACAAACACCAAACTTAAAAAGCTGGGTGACCAGTATCAGAAAATAGTCGAGGAGTACAAGAATTTCCAGAAAGAGTTGGTTCACCGAGTAATTGAAACTGCATCATCCTTCAATGAGGTGGATTTACTGTCTATGATGTATCTATTGTTCATTACCACTTTAATTGAACTAAAGAACTTTGTGTGACTGTAGGTATTCAGACCCTTGGCGGAAATGCTCTCAGAATTAGACGTTTTACTTGGTTTTGCTGATTTAGCCTCTAGCTGTCCAACTCCTTATACTAGGCCAGACATCACATCATCGGTATCTTTTTTACTGTTGATTATCCTGAGCACCAATAGATTTGAATCTTACATAAAAGCTACACTTACTCAAAATTAATTTGTTGCCGGCCTTCTGCAACAGGATGAGGGAAATATTATATTGGAAGGAAGTAGGCACCCCTGTGTGGAGGCTCAAGATTGGGTTAATTTCATACCAAATGATTGTAAATTAGTGAGTGGCTTGTTTGGATAATCAAGAATACGTTAATGCTATTCTTACTTATTGTCATTATGTTTCAGATTTGAAATGACTAATTACTTGAAGCTTTTATTTCCCTCGTAAATAGGTAAGGGGAGAAAGTTGGTTCCAAATCATTACTGGGCCTAATATGGGCGGAAAATCTACATTTATCCGACAGGTGCTATGTTGATGACATTTTCATCATTATTTTATTTTGAAATATCTTTAAACTTCTGGTGGTGTAATAGCCTGGAGTTATGACATATTCGCCCAAATTCCTCTTGTTTCAAGTTTGGATTATTAAGTTCCACAGGGGCTTGATATCAGCTTGCCAATACTGTTGCACCTTGTATTCACTCTGAAAACTGGAAATATGTTTTTATAGGTTGGAGTGAACATTCTAATGGCACAAGTAGGTTGTTTTGTTCCCTGTGACAAAGCTAGTATTTCTGTTCGTGATTGCATTTTTGCCCGCGTAGGTGCAGGTGACTGTCAAGTAAGTTCTCAACGCATACTCATTTTTTAAATAACCCTTCACTGAATACTATATTTCTGACATGCATTAAACTATTGTTTTCGTGAACAAATCATGGTTCCTCTTACTTTCCATTAAGGAGTTAAAGGAGACAGGTTCTCTGTGTGACTTTCACTTCACTGGAGGGCTATCTTCGTGCTAGAACAGTGATTAGAACTAATGCTTAGTTTCCCATCATCAACTTATCTTTTTTCCTTATTATTGCAATCTTATTCCTATGCTGCCTAGTTCACACGTTTCACTGACTAATCAAAACTACCTTCTACATATAACAATCCTTTAACATCCTTAGTTGTCCTTCCCTTCTTTTCTACGTGAGTAGGTGGTGTCTATGACTGGAGGCTTATCACATACCCTTTTCTCGTAGTTCTAATTTCCAGGTTCATCGCATGCATAAGCATTCATTACCAACCTTGGAGCCCTGCCAACCCCTGGCTAGTTGTAGCTGAACACTTGATGATACATTAGGAAATGACAATTAAGCAACTGCTTGTTTGGTTGATTAGTTTCTATGTCTTCACAATCACATGTTAGTATTTACTATGGTCTGAGAGCCTACATGGTTTTACAGTTTTTCAAACAAGATTTTCAAGCCATTCAAAGTGACTAATGAGCTGCTTAGGTTTCAAATTAACCACGATAGGGAAAAAACCCACCAAAGGGCGTAGGCCTATAATCCTTTTTCTTGGCCTTCATAGTATCCCTTTTTACTGGCGCTACCTGCAATCTATGTCCTGATATTCATAAATGACTTCTGATGATGTGGTGTTTACTTCAGTTTTTGAATGCCGCAAACTGTTGTGGGTTATATGCTTTAATCTCATTCAATGGACTACTTTAGTTTCGATGCTTTAGTAAGTTTAAAAAAATGGATCAAGAAATTAATTTTACCGACTTTACTTCGACTCTGCTGAAAGCTTCTTTTACATAAAAAAATTAATCACACACTGTTCAGCATCTTATCTAGAAGTCAGATCACGAGGGAATCAGGGTTGTAAAGGCAAAAGCAGATACAAAAAATATATTTTAAATTCTTTTGAGTTCTTAATAGGACATCAAGTGCTAATTTAAATTGTAAAGAGCTTAGAGAGAATGAGTTCAAATTTGGTAACCACATTATATTTAATATCCTATGAGTTTCTTTCATAACCAAAAAATGGTAGGGTCAAACGGTTGTCCTATGAAAATAGTTGGTGGGTGCAAGTTGGTCCAAACACTCGCAGATGTGTATATATATATATATATATATATATATATATAATTGTATTTACAATCAACATTGTAATTGATGGGGAACAATTTTTTGGGACTTTTTCTGTGAAGGCATTTGCTCGACAATTTTCTTAGTTAAATTATTTTCTCGTTACTTGTATATTTGAATCGGCTGTTTCCTTCGATGTGGAAATCTACTAATGTCTATTTTACTATTCTAGCTTCGTGGAGTTTCTACCTTTATGCAAGAGATGCTTGAAACTGCATCTATACTGAAAGGAGCTACAGAGAAGTCTTTGATAATCATTGATGAATTGGGCCGTGGGACATCCACTTATGATGGATTTGGTTGGTTTCTTTCTTGACTCCCTAGCTTTCTCCTGACGTGTCTTGCATTATAGAGTTTTCATAATTTATTCCATAAGGTGCATCGTCAATTCTTTATCACTCGCCCTTTTTGAATTGAAGAATATCCATATAAGTTGTTAAATGTGTATGGCTGGGAACTCTATGAAGAATTGACTACCCAAGCCTCCAACGTTCATTGAACTTTTTATATACCCCAGTCCAAAAAACCATATTAACAGACGAACACAGGAAGGAATTAAACCTAATGGTATCCCAAAGATCCTCTCTAGACTGCTCTACACCACCAAAAATTATCATATATCTCAATGAAAGCTTGGTTTCTCATAAAGAACAGTTTTTTTTTTTTTTTTTTTTAATTTTTAAAATTTGAATTAATTAGAGCATGTAGCTTGAAGAACTAAAGAAGATCAGTTATCCCGATGAAAAATGTCTTTCTTTCACCCATTCGACCCAACTTGCTGAAAATTGTAGTACATTTTAAATGACACTCTTTATAATGTGCCGATTTTCACCCACTAACATTTATCCCCCTATCTTTACTTAACCTGCCGAAAATTGCAGTACATCTTAAATGATACTTTCTTATTACATGACGATCATCACCTTAAATTTTTATGCTTGAGCATGCACGACAATGCTTTGTTCACTGGTTTTAAATGAAATCAGTTATTTTCTCAAGTTGGTTTTTATTAAAATTACTCTGTATTGAATCTTATAATCAGGTTTAGCATGGGCCATTTGTGAACATCTTGTTGAAATGATTAAAGCACCCACTTTATTTGCAACCCACTTCCACGAACTAACTGCACTAACTCATGGCAATACTGATCTTGAGCCCCATGGAAAGCAAATTGTTGGTGTGGCAAACTTTCATGTCAGTGCACACATAGACTCATCAAATCACAAGTTGACAATGCTGTACAAGGTAAATGGTTGCTGGGAATATCTCTTTTTCCTATATTTTATATATATATTTTTTTTTGTCTTAAATTAGATGGGTTGACCAAGGACATCATAACAGAGTATGCTTCATTTTTTCCTGTTCCTTTTGGATTCTGTATTTTAGCCTAAAAGGTTTGTTCTAGGAAAGATGAGGAAATGGAACCCCAGTGGTATATTTTTCTGAATACATTAATGATATAAAAACACATGTTAATATAACATAGTAGTTTGAAGACACGACAGAAGGGCATTGATGATGTCATTTGAATAATTTCCGTTGGATTTATATTAATCTGTATGGCATCTGTAATATGTTGATCAGGAGTTATTAGACCAATGAGAGTGAAAGAAAAGCTAAAACCTGAAGTGCTGTTGTCTACATGTTCGTGAGCCTTTTAGACTTGGTATTCAATAATAGTGTCGATCTATCACTTGTGAATTTAGACTTGGTATTTTACCCATGATCCACTTCAGAATCTATAAATTTATTCCTTCAAGTTGAAAAAAAAAAAAAAAAAACCCCATCATTATTATTTAGACCATGCATCCGAATGTCAAATCTTCCAGTTTCCAAACCTATTTTAGTTTGACCAAATGTTTTCCCAGCCTTCATTAAAATTGGAGGCATCAAGTTTATTATCCTCTCCCTCAATTACCGGCTGTTGTAACTAGCAAGTTCGTTTATGTAACAGAGCTTCATTTGGTCCTTCGCTTTTCTGTCTTTTGCAGGTTGAACCTGGAGCTTGTGATCAAAGCTTTGGGATTCATGTAGCAGAATTTGCGAACTTTCCTTCTAGTGTCGTGGCACTTGCCAGAGAAAAGGCTGCTGAACTGGAAGATTTCTCCACTGATTCAACTACTTCAGCCACTACCGGGAAAGAGGTATAATCTATAGTGTTACATTTTCGTTAAAAATAATTGATTCCATGCTTATCTACACTCCAAAGTATGGGATCAATGAATCCGAAACTCAAATAAGACCAACTTGTCTTACTATCTTTTTCATTAGCTAGTCACGTGTTTCTATTTCTTTCCAAAATCTAAATGACACCCTACCGTATTGAAATCTAGACTACTATATATTCATAATTTGATTCAAACAAAGTTTCTTTCTTACAAATAAACTGACTGCATGCAAGGTCTTTTTGTTTCCTGATCCTACATGTGATTCTTTTCGCCAAGCAAGCTGTGGACTAATGTAAAGGGAAAAGGCGAATAGTTTTGGTTTTAAAAAATAAAGGAAAAGGCCTAATTTATGAATATCATCCTTGATTATAGTTTTTCAGAGAAAGGGGCTTCGGGAAAAAGTGAGTTGTATACCTAGCTTTCTTTCTATAGCAAGTTTCCTTGTTTATCTCACTGGAGGGTTGACGGGTGAGACTTTTTTCTATAGAGGCATTAGAGTGGAAGATCCGCTAGCCACCTTTCTCATTTGAGGGAAGGAGCGAATACTTGTTAAATTCACATAAGCGTAGCTCAATTTTTAGATTTTCTGTGGGCTGAAAAAACAACTTTTCTGAACAAGGTTAATGCAAGAAGACAACTCTGAACCAAAATGGAAGCAAAAATTTAAAAATGAAACTCCCAATGTTAAGAATCAACAACTTGATAATTAGGAAACAATTTTGTTGTAGAGATTCAAAAGGGAAGTATCAGAATGTGTCAAACTTCAAACCTCATACGAAGAAACATCTATAGCCTTAAAATGAAATCTCCATAAAATGTGGTCCAAATCCTAAATTACTTACTTGAAAGCACATACAAATTGAAACTCAAATTCATAGACGAAGATCTGTAGACAAAGCCAATGGGTTAATCCTCTCATCCCTAACCAACCAAGAGAAACATAGACTTAGAAGAGAATATACCCATGGCCACAAGGAACCTAATACAATTGTCAAAAGAATCCAAGTGAAGATGAACAACATGCAAAAGAGAACAAATATGATAAATCATTGGTCTCTCCATCAAACAGATCTTTTCTAAATTGAAAGTTGCAAGATAAATAAACAACATTCATAGACAAGTAAATTACAGAAGGTTGTCAGGTGAGATTTTTTCTCTAATAGAATCATCTTTCTGAAGAGATTGATGAGACGTAGGGATGACAATAACTCTGGAAGAGTGCCTTAAATCACCACAATAGTCACCCATTAGAGTGATGCCCGTAATTATTTTTGCTGTTATTTTTGTTCAACATCATATTGAATGGAGGGATTTAAATTTCGACCTCTTCATCAAGGGTATATATCTTAACTAATTGAGCTACGCTCAAGTTGAATACTACTCTAAAAAATGTATGAGTGCATGCAGATGCATGTATTACTGCTAAATATATAGATATTCTAGTCATGTGTTATATGCCTTTACTTATGTACACTACCATTATATACAGATACCATCAAAGCGAAAACGCGAGTTTGGTTCAGAAGACATGTCCAAAGGTGTAGGGCGGGCTCGCCAGTTTTTAGAGGAGTTTGCTAATCTTCCATTAGATAAAATGGATCTAAAGGAAGCTCTACAACAAGTGAGCCAATTACGAGATGGTTTGAAGAAGGATGCCGTGGACTCTAATTGGCTCCAACAATTCCTTTAA

mRNA sequence

GTTCACAACAAGGCGAAGAAACAAAGCCATAATTGAAAGCTTCAAACGAAACAGAAGAAATGGATGAAAATGTCGATGAGCAAAGCAAGCTTCCCGAGCTCAAACTTGATGCTAAACAGGCTCAAGGGTTTCTCGCATTCTTCAAAACCCTACCCCCCGACTCGAGAGCTGTTCGATTTTTTGATCGTCGGGATTACTATACTGTCCATGGTGATAGTGCAGTTTTCATTGCAAAGACCTATTACCGTACTACAACTGCTTTACGACAACTGGGCAATGCATCTGAAGCTCTGTCTAGTGTGAGTGTCAGCAAAAATATGTTTGAATCCATTGCCCGGGATCTTCTTTTGGAAAGAATGGACCATACATTGGAGCTTTATGAGGGCAGTGGTTCCAATTGGAGACTGATCAAAAGTGGTTCACCTGGTAATATTGGCAGTTTTGAAGACGTTTTGTTTGCAAATAATGAAATGCAGGACAGCCCTGCTATTGTGGCACTATTACCGAACTTCCGAGAAAATGGGTGCATTGTTGGACTAGCCTACGTTGATTTAACAAAAAGGTTGATGGGGTTGGCTGAATTTCTAGACGATAGCCATTTTACAAATGTGGAGTCAGCTCTGGTTGGTCTCGGTTGTAAGGAATGCCTTCTGCCTCTAGACAGTGGAAAGTTCGGTGATTTAAAACCTCTACATGATGCATTGACAAAGTGTGGTGTGATGTTAACTGAGAGAAAAAAATCAGAATTTAAAATGAGAGATTTGGTGCAGGATCTTTCAAGGCTTGTCAAAGGTTCTGTTGAACCTGTTAGAGATATGGTATCTGGATTTGAATTTGCGCCTGCTGCCTTAGGAGCATTGCTGGCTTATGCAGAATTACTGGCAGATGAAAGCAATTATGGAAACTACAACATCCAGAAATACAATCTTGATAGCTACATGAGGTTAGACTCTGCTGCCATGAGAGCATTAAATGTCCTAGAAAGTAAAACTGATGCAAACAAAAACTTCAGCCTGTTTGGTCTCATGAATAGAACCTGTACTGCTGGAATGGGTAAAAGATTGCTTCATATGTGGCTAAAACAGCCTCTGTTAGACGTCAAAGAAATTAATTCTAGACTGGATCTTGTTCAAGCATTTGTGGAGGATACTGCTCTCCGCCAGGATTTGAGACAACATCTCAAAAGAATCTCAGATATTGAACGATTGACACAGTATCTCGAGAAGAGAAGAGCTGGATTACAGCACATTGTTAAACTTTATCAGTCAAGTATAAGGCTTCCATTCATTAAAAATGCCTTGGAGAATTATGAAGGACAATTTTCCTCACTTATCAAGGAGAAGTACATGGAATGTCTTGAGATCTGGACTGACAACGATCATCTGAACAAGTTCAATAATCTTGTGGAAACTGCTGTTGATCTTGATCAGCTTGAGAATGGAGAATATATGATTTCATCTAGTTACGACCCTGCTCTGTCCAAGTTGAAGAATGTGCAGGAATCGATAGAGCAGCAAATACAGGATTTGCATAGGCAGGTTGCTAATGATCTTGATCTTGCAGTTGATAAGGCTTTGAAGTTAGACAAAGGTACACAATTTGGACATGTTTTTAGAATTACTAAGAAAGAAGAACCAAAAGTAAGGAAAAAGCTCTCCACCCACTTCATTGTCCTTGAAACCCGAAAAGATGGAGTGAAGTTTACAAACACCAAACTTAAAAAGCTGGGTGACCAGTATCAGAAAATAGTCGAGGAGTACAAGAATTTCCAGAAAGAGTTGGTTCACCGAGTAATTGAAACTGCATCATCCTTCAATGAGGTATTCAGACCCTTGGCGGAAATGCTCTCAGAATTAGACGTTTTACTTGGTTTTGCTGATTTAGCCTCTAGCTGTCCAACTCCTTATACTAGGCCAGACATCACATCATCGGATGAGGGAAATATTATATTGGAAGGAAGTAGGCACCCCTGTGTGGAGGCTCAAGATTGGGTTAATTTCATACCAAATGATTGTAAATTAGTAAGGGGAGAAAGTTGGTTCCAAATCATTACTGGGCCTAATATGGGCGGAAAATCTACATTTATCCGACAGGTTGGAGTGAACATTCTAATGGCACAAGTAGGTTGTTTTGTTCCCTGTGACAAAGCTAGTATTTCTGTTCGTGATTGCATTTTTGCCCGCGTAGGTGCAGGTGACTGTCAACTTCGTGGAGTTTCTACCTTTATGCAAGAGATGCTTGAAACTGCATCTATACTGAAAGGAGCTACAGAGAAGTCTTTGATAATCATTGATGAATTGGGCCGTGGGACATCCACTTATGATGGATTTGGTTTAGCATGGGCCATTTGTGAACATCTTGTTGAAATGATTAAAGCACCCACTTTATTTGCAACCCACTTCCACGAACTAACTGCACTAACTCATGGCAATACTGATCTTGAGCCCCATGGAAAGCAAATTGTTGGTGTGGCAAACTTTCATGTCAGTGCACACATAGACTCATCAAATCACAAGTTGACAATGCTGTACAAGGTTGAACCTGGAGCTTGTGATCAAAGCTTTGGGATTCATGTAGCAGAATTTGCGAACTTTCCTTCTAGTGTCGTGGCACTTGCCAGAGAAAAGGCTGCTGAACTGGAAGATTTCTCCACTGATTCAACTACTTCAGCCACTACCGGGAAAGAGATACCATCAAAGCGAAAACGCGAGTTTGGTTCAGAAGACATGTCCAAAGGTGTAGGGCGGGCTCGCCAGTTTTTAGAGGAGTTTGCTAATCTTCCATTAGATAAAATGGATCTAAAGGAAGCTCTACAACAAGTGAGCCAATTACGAGATGGTTTGAAGAAGGATGCCGTGGACTCTAATTGGCTCCAACAATTCCTTTAA

Coding sequence (CDS)

ATGGATGAAAATGTCGATGAGCAAAGCAAGCTTCCCGAGCTCAAACTTGATGCTAAACAGGCTCAAGGGTTTCTCGCATTCTTCAAAACCCTACCCCCCGACTCGAGAGCTGTTCGATTTTTTGATCGTCGGGATTACTATACTGTCCATGGTGATAGTGCAGTTTTCATTGCAAAGACCTATTACCGTACTACAACTGCTTTACGACAACTGGGCAATGCATCTGAAGCTCTGTCTAGTGTGAGTGTCAGCAAAAATATGTTTGAATCCATTGCCCGGGATCTTCTTTTGGAAAGAATGGACCATACATTGGAGCTTTATGAGGGCAGTGGTTCCAATTGGAGACTGATCAAAAGTGGTTCACCTGGTAATATTGGCAGTTTTGAAGACGTTTTGTTTGCAAATAATGAAATGCAGGACAGCCCTGCTATTGTGGCACTATTACCGAACTTCCGAGAAAATGGGTGCATTGTTGGACTAGCCTACGTTGATTTAACAAAAAGGTTGATGGGGTTGGCTGAATTTCTAGACGATAGCCATTTTACAAATGTGGAGTCAGCTCTGGTTGGTCTCGGTTGTAAGGAATGCCTTCTGCCTCTAGACAGTGGAAAGTTCGGTGATTTAAAACCTCTACATGATGCATTGACAAAGTGTGGTGTGATGTTAACTGAGAGAAAAAAATCAGAATTTAAAATGAGAGATTTGGTGCAGGATCTTTCAAGGCTTGTCAAAGGTTCTGTTGAACCTGTTAGAGATATGGTATCTGGATTTGAATTTGCGCCTGCTGCCTTAGGAGCATTGCTGGCTTATGCAGAATTACTGGCAGATGAAAGCAATTATGGAAACTACAACATCCAGAAATACAATCTTGATAGCTACATGAGGTTAGACTCTGCTGCCATGAGAGCATTAAATGTCCTAGAAAGTAAAACTGATGCAAACAAAAACTTCAGCCTGTTTGGTCTCATGAATAGAACCTGTACTGCTGGAATGGGTAAAAGATTGCTTCATATGTGGCTAAAACAGCCTCTGTTAGACGTCAAAGAAATTAATTCTAGACTGGATCTTGTTCAAGCATTTGTGGAGGATACTGCTCTCCGCCAGGATTTGAGACAACATCTCAAAAGAATCTCAGATATTGAACGATTGACACAGTATCTCGAGAAGAGAAGAGCTGGATTACAGCACATTGTTAAACTTTATCAGTCAAGTATAAGGCTTCCATTCATTAAAAATGCCTTGGAGAATTATGAAGGACAATTTTCCTCACTTATCAAGGAGAAGTACATGGAATGTCTTGAGATCTGGACTGACAACGATCATCTGAACAAGTTCAATAATCTTGTGGAAACTGCTGTTGATCTTGATCAGCTTGAGAATGGAGAATATATGATTTCATCTAGTTACGACCCTGCTCTGTCCAAGTTGAAGAATGTGCAGGAATCGATAGAGCAGCAAATACAGGATTTGCATAGGCAGGTTGCTAATGATCTTGATCTTGCAGTTGATAAGGCTTTGAAGTTAGACAAAGGTACACAATTTGGACATGTTTTTAGAATTACTAAGAAAGAAGAACCAAAAGTAAGGAAAAAGCTCTCCACCCACTTCATTGTCCTTGAAACCCGAAAAGATGGAGTGAAGTTTACAAACACCAAACTTAAAAAGCTGGGTGACCAGTATCAGAAAATAGTCGAGGAGTACAAGAATTTCCAGAAAGAGTTGGTTCACCGAGTAATTGAAACTGCATCATCCTTCAATGAGGTATTCAGACCCTTGGCGGAAATGCTCTCAGAATTAGACGTTTTACTTGGTTTTGCTGATTTAGCCTCTAGCTGTCCAACTCCTTATACTAGGCCAGACATCACATCATCGGATGAGGGAAATATTATATTGGAAGGAAGTAGGCACCCCTGTGTGGAGGCTCAAGATTGGGTTAATTTCATACCAAATGATTGTAAATTAGTAAGGGGAGAAAGTTGGTTCCAAATCATTACTGGGCCTAATATGGGCGGAAAATCTACATTTATCCGACAGGTTGGAGTGAACATTCTAATGGCACAAGTAGGTTGTTTTGTTCCCTGTGACAAAGCTAGTATTTCTGTTCGTGATTGCATTTTTGCCCGCGTAGGTGCAGGTGACTGTCAACTTCGTGGAGTTTCTACCTTTATGCAAGAGATGCTTGAAACTGCATCTATACTGAAAGGAGCTACAGAGAAGTCTTTGATAATCATTGATGAATTGGGCCGTGGGACATCCACTTATGATGGATTTGGTTTAGCATGGGCCATTTGTGAACATCTTGTTGAAATGATTAAAGCACCCACTTTATTTGCAACCCACTTCCACGAACTAACTGCACTAACTCATGGCAATACTGATCTTGAGCCCCATGGAAAGCAAATTGTTGGTGTGGCAAACTTTCATGTCAGTGCACACATAGACTCATCAAATCACAAGTTGACAATGCTGTACAAGGTTGAACCTGGAGCTTGTGATCAAAGCTTTGGGATTCATGTAGCAGAATTTGCGAACTTTCCTTCTAGTGTCGTGGCACTTGCCAGAGAAAAGGCTGCTGAACTGGAAGATTTCTCCACTGATTCAACTACTTCAGCCACTACCGGGAAAGAGATACCATCAAAGCGAAAACGCGAGTTTGGTTCAGAAGACATGTCCAAAGGTGTAGGGCGGGCTCGCCAGTTTTTAGAGGAGTTTGCTAATCTTCCATTAGATAAAATGGATCTAAAGGAAGCTCTACAACAAGTGAGCCAATTACGAGATGGTTTGAAGAAGGATGCCGTGGACTCTAATTGGCTCCAACAATTCCTTTAA

Protein sequence

MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTVHGDSAVFIAKTYYRTTTALRQLGNASEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSGSPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSHFTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLSRLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAFVEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQFSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLETRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELDVLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESWFQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEMIKAPTLFATHFHELTALTHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVAEFANFPSSVVALAREKAAELEDFSTDSTTSATTGKEIPSKRKREFGSEDMSKGVGRARQFLEEFANLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL

Homology

[Close]

BLAST of Carg17906 vs. NCBI nr
Match: KAG7023250.1 (DNA mismatch repair protein MSH2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1864.4 bits (4828), Expect = 0.0e+00
Identity = 942/942 (100.00%), Postives = 942/942 (100.00%), Query Frame = 0


Query: 1   MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTVHGDSAVFIAKT 60
           MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTVHGDSAVFIAKT
Sbjct: 1   MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTVHGDSAVFIAKT 60

Query: 61  YYRTTTALRQLGNASEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG 120
           YYRTTTALRQLGNASEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG
Sbjct: 61  YYRTTTALRQLGNASEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG 120

Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSH 180
           SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSH 180

Query: 181 FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS 240
           FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS 240

Query: 241 RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
           RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300

Query: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
           MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF
Sbjct: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360

Query: 361 VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
           VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ
Sbjct: 361 VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420

Query: 421 FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
           FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ
Sbjct: 421 FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480

Query: 481 ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
           ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540

Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD 600
           TRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD 600

Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW 660
           VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW
Sbjct: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW 660

Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
           FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720

Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEMIKAPTLFATH 780
           TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEMIKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEMIKAPTLFATH 780

Query: 781 FHELTALTHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
           FHELTALTHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALTHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840

Query: 841 EFANFPSSVVALAREKAAELEDFSTDSTTSATTGKEIPSKRKREFGSEDMSKGVGRARQF 900
           EFANFPSSVVALAREKAAELEDFSTDSTTSATTGKEIPSKRKREFGSEDMSKGVGRARQF
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSTDSTTSATTGKEIPSKRKREFGSEDMSKGVGRARQF 900

Query: 901 LEEFANLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
           LEEFANLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
Sbjct: 901 LEEFANLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 942

[Close]

BLAST of Carg17906 vs. NCBI nr
Match: KAG6589561.1 (DNA mismatch repair protein MSH2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1859.3 bits (4815), Expect = 0.0e+00
Identity = 938/942 (99.58%), Postives = 942/942 (100.00%), Query Frame = 0


Query: 1   MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTVHGDSAVFIAKT 60
           MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTVHGDSAVFIAKT
Sbjct: 1   MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTVHGDSAVFIAKT 60

Query: 61  YYRTTTALRQLGNASEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG 120
           YYRTTTALRQLGNASEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG
Sbjct: 61  YYRTTTALRQLGNASEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG 120

Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSH 180
           SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSH 180

Query: 181 FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS 240
           FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS 240

Query: 241 RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
           RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300

Query: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
           MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF
Sbjct: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360

Query: 361 VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
           VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ
Sbjct: 361 VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420

Query: 421 FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
           FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEY+ISSSYDPALSKLK+VQ
Sbjct: 421 FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYLISSSYDPALSKLKHVQ 480

Query: 481 ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
           ES+EQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESVEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540

Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD 600
           TRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD 600

Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW 660
           VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW
Sbjct: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW 660

Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
           FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720

Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEMIKAPTLFATH 780
           TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVE+IKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780

Query: 781 FHELTALTHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
           FHELTALTHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALTHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840

Query: 841 EFANFPSSVVALAREKAAELEDFSTDSTTSATTGKEIPSKRKREFGSEDMSKGVGRARQF 900
           EFANFPSSVVALAREKAAELEDFSTDSTTSATTGKEIPSKRKREFGSEDMSKGVGRARQF
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSTDSTTSATTGKEIPSKRKREFGSEDMSKGVGRARQF 900

Query: 901 LEEFANLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
           LEEFANLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
Sbjct: 901 LEEFANLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 942

[Close]

BLAST of Carg17906 vs. NCBI nr
Match: XP_023516636.1 (DNA mismatch repair protein MSH2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1857.0 bits (4809), Expect = 0.0e+00
Identity = 938/942 (99.58%), Postives = 939/942 (99.68%), Query Frame = 0


Query: 1   MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTVHGDSAVFIAKT 60
           MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTVHGDSAVFIAKT
Sbjct: 1   MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTVHGDSAVFIAKT 60

Query: 61  YYRTTTALRQLGNASEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG 120
           YYRTTTALRQLGN SEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG
Sbjct: 61  YYRTTTALRQLGNVSEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG 120

Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSH 180
           SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSH 180

Query: 181 FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS 240
           FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS 240

Query: 241 RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
           RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300

Query: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
           MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF
Sbjct: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360

Query: 361 VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
           VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ
Sbjct: 361 VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420

Query: 421 FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
           FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ
Sbjct: 421 FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480

Query: 481 ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
           ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540

Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD 600
           TRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD 600

Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW 660
           VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW
Sbjct: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW 660

Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
           FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720

Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEMIKAPTLFATH 780
           TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVE+IKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780

Query: 781 FHELTALTHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
           FHELTAL HGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840

Query: 841 EFANFPSSVVALAREKAAELEDFSTDSTTSATTGKEIPSKRKREFGSEDMSKGVGRARQF 900
           EFANFPSSVVALAREKAAELEDFSTDSTTSATTGKEIPSKRKREFGSEDMSKGV RARQF
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSTDSTTSATTGKEIPSKRKREFGSEDMSKGVARARQF 900

Query: 901 LEEFANLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
           LEEFANLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
Sbjct: 901 LEEFANLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 942

[Close]

BLAST of Carg17906 vs. NCBI nr
Match: XP_022922057.1 (DNA mismatch repair protein MSH2 [Cucurbita moschata])

HSP 1 Score: 1855.9 bits (4806), Expect = 0.0e+00
Identity = 937/942 (99.47%), Postives = 939/942 (99.68%), Query Frame = 0


Query: 1   MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTVHGDSAVFIAKT 60
           MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTVHGDSAVFIAKT
Sbjct: 1   MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTVHGDSAVFIAKT 60

Query: 61  YYRTTTALRQLGNASEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG 120
           YYRTTTALRQLGN SEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG
Sbjct: 61  YYRTTTALRQLGNVSEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG 120

Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSH 180
           SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSH 180

Query: 181 FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS 240
           FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS 240

Query: 241 RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
           RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300

Query: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
           MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF
Sbjct: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360

Query: 361 VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
           VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ
Sbjct: 361 VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420

Query: 421 FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
           FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ
Sbjct: 421 FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480

Query: 481 ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
           ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540

Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD 600
           TRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD 600

Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW 660
           VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW
Sbjct: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW 660

Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
           FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720

Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEMIKAPTLFATH 780
           TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVE+IKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780

Query: 781 FHELTALTHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
           FHELTAL HGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840

Query: 841 EFANFPSSVVALAREKAAELEDFSTDSTTSATTGKEIPSKRKREFGSEDMSKGVGRARQF 900
           EFANFPSSVVALAREKAAELEDFSTDSTTSATTGKEIPSKRKREFGSEDMSKGVGRARQF
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSTDSTTSATTGKEIPSKRKREFGSEDMSKGVGRARQF 900

Query: 901 LEEFANLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
           LEEFANLPLDKMDLKEALQQVSQLRDGLKKDA +SNWLQQFL
Sbjct: 901 LEEFANLPLDKMDLKEALQQVSQLRDGLKKDAANSNWLQQFL 942

[Close]

BLAST of Carg17906 vs. NCBI nr
Match: XP_022987300.1 (DNA mismatch repair protein MSH2 [Cucurbita maxima])

HSP 1 Score: 1840.9 bits (4767), Expect = 0.0e+00
Identity = 927/942 (98.41%), Postives = 936/942 (99.36%), Query Frame = 0


Query: 1   MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTVHGDSAVFIAKT 60
           M+ENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDY+TVHGD+AVFIAKT
Sbjct: 1   MNENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYFTVHGDNAVFIAKT 60

Query: 61  YYRTTTALRQLGNASEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG 120
           YYRTTTALRQLGN SEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG
Sbjct: 61  YYRTTTALRQLGNVSEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG 120

Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSH 180
           SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAY+DLTKRLMGLAEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYIDLTKRLMGLAEFLDDSH 180

Query: 181 FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS 240
           FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS 240

Query: 241 RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
           RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300

Query: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
           MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF
Sbjct: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360

Query: 361 VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
           VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ
Sbjct: 361 VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420

Query: 421 FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
           FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKL+N Q
Sbjct: 421 FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLRNAQ 480

Query: 481 ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
           ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540

Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD 600
           TRKDGVKFTNTKLKKLGDQYQK+VEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKLVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD 600

Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW 660
           VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW
Sbjct: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW 660

Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
           FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKA ISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKAIISVRDCIFARVGAGDCQLRGVS 720

Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEMIKAPTLFATH 780
           TFMQEMLETASILKG+TEKSLIIIDELGRGTSTYDGFGLAWAICEHLVE+IKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGSTEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780

Query: 781 FHELTALTHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
           FHELTAL HGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840

Query: 841 EFANFPSSVVALAREKAAELEDFSTDSTTSATTGKEIPSKRKREFGSEDMSKGVGRARQF 900
           EFANFPSSVVALAREKA+ELEDFSTDSTTSA TGKEIPSKRKREFGSEDMSKGV RARQF
Sbjct: 841 EFANFPSSVVALAREKASELEDFSTDSTTSANTGKEIPSKRKREFGSEDMSKGVVRARQF 900

Query: 901 LEEFANLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
           LEEFANLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
Sbjct: 901 LEEFANLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 942

[Close]

BLAST of Carg17906 vs. ExPASy Swiss-Prot
Match: O24617 (DNA mismatch repair protein MSH2 OS=Arabidopsis thaliana OX=3702 GN=MSH2 PE=1 SV=1)

HSP 1 Score: 1417.1 bits (3667), Expect = 0.0e+00
Identity = 690/942 (73.25%), Postives = 826/942 (87.69%), Query Frame = 0


Query: 1   MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTVHGDSAVFIAKT 60
           M+ N +EQ+KLPELKLDAKQAQGFL+F+KTLP D+RAVRFFDR+DYYT HG+++VFIAKT
Sbjct: 1   MEGNFEEQNKLPELKLDAKQAQGFLSFYKTLPNDTRAVRFFDRKDYYTAHGENSVFIAKT 60

Query: 61  YYRTTTALRQLGNASEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG 120
           YY TTTALRQLG+ S ALSSVS+S+NMFE+IARDLLLER DHT+ELYEGSGSNWRL+K+G
Sbjct: 61  YYHTTTALRQLGSGSNALSSVSISRNMFETIARDLLLERNDHTVELYEGSGSNWRLVKTG 120

Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSH 180
           SPGNIGSFEDVLFANNEMQD+P +V++ P+F +  C++G+AYVDLT+R++GLAEFLDDS 
Sbjct: 121 SPGNIGSFEDVLFANNEMQDTPVVVSIFPSFHDGRCVIGMAYVDLTRRVLGLAEFLDDSR 180

Query: 181 FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS 240
           FTN+ES+L+ LG KEC+ P +SGK  + K L+D+L +C VM+TERKK EFK RDL  DL 
Sbjct: 181 FTNLESSLIALGAKECIFPAESGKSNECKSLYDSLERCAVMITERKKHEFKGRDLDSDLK 240

Query: 241 RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
           RLVKG++EPVRD+VSGF+ A  ALGALL+++ELL++E NYGN+ I++Y++  +MRLDSAA
Sbjct: 241 RLVKGNIEPVRDLVSGFDLATPALGALLSFSELLSNEDNYGNFTIRRYDIGGFMRLDSAA 300

Query: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
           MRALNV+ESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL+D+ EI +RLD+VQ F
Sbjct: 301 MRALNVMESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLVDLNEIKTRLDIVQCF 360

Query: 361 VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
           VE+  LRQDLRQHLKRISD+ERL + LE+RR GLQHI+KLYQS+IRLPFIK A++ Y G+
Sbjct: 361 VEEAGLRQDLRQHLKRISDVERLLRSLERRRGGLQHIIKLYQSTIRLPFIKTAMQQYTGE 420

Query: 421 FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
           F+SLI E+Y++ LE  +D DHL KF +LVE +VDLDQLENGEYMISSSYD  L+ LK+ +
Sbjct: 421 FASLISERYLKKLEALSDQDHLGKFIDLVECSVDLDQLENGEYMISSSYDTKLASLKDQK 480

Query: 481 ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
           E +EQQI +LH++ A +LDL VDKALKLDK  QFGHVFRITKKEEPK+RKKL+T FIVLE
Sbjct: 481 ELLEQQIHELHKKTAIELDLQVDKALKLDKAAQFGHVFRITKKEEPKIRKKLTTQFIVLE 540

Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD 600
           TRKDGVKFTNTKLKKLGDQYQ +V++Y++ QKELV RV+ET +SF+EVF  LA +LSE+D
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQSVVDDYRSCQKELVDRVVETVTSFSEVFEDLAGLLSEMD 600

Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW 660
           VLL FADLA+SCPTPY RP+ITSSD G+I+LEGSRHPCVEAQDWVNFIPNDC+L+RG+SW
Sbjct: 601 VLLSFADLAASCPTPYCRPEITSSDAGDIVLEGSRHPCVEAQDWVNFIPNDCRLMRGKSW 660

Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
           FQI+TGPNMGGKSTFIRQVGV +LMAQVG FVPCDKASIS+RDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIVTGPNMGGKSTFIRQVGVIVLMAQVGSFVPCDKASISIRDCIFARVGAGDCQLRGVS 720

Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEMIKAPTLFATH 780
           TFMQEMLETASILKGA++KSLIIIDELGRGTSTYDGFGLAWAICEHLV++ +APTLFATH
Sbjct: 721 TFMQEMLETASILKGASDKSLIIIDELGRGTSTYDGFGLAWAICEHLVQVKRAPTLFATH 780

Query: 781 FHELTALTHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
           FHELTAL   N+++  +    VGVANFHVSAHID+ + KLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAQANSEVSGN---TVGVANFHVSAHIDTESRKLTMLYKVEPGACDQSFGIHVA 840

Query: 841 EFANFPSSVVALAREKAAELEDFSTDSTTSATTGKEIPSKRKREFGSEDMSKGVGRARQF 900
           EFANFP SVVALAREKAAELEDFS  S       +E   ++ RE   +++S+G  RA +F
Sbjct: 841 EFANFPESVVALAREKAAELEDFSPSS--MIINNEESGKRKSREDDPDEVSRGAERAHKF 900

Query: 901 LEEFANLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
           L+EFA +PLDKM+LK++LQ+V +++D L+KDA D +WL+QFL
Sbjct: 901 LKEFAAIPLDKMELKDSLQRVREMKDELEKDAADCHWLRQFL 937

[Close]

BLAST of Carg17906 vs. ExPASy Swiss-Prot
Match: Q9XGC9 (DNA mismatch repair protein MSH2 OS=Zea mays OX=4577 GN=MUS1 PE=3 SV=1)

HSP 1 Score: 1289.6 bits (3336), Expect = 0.0e+00
Identity = 645/940 (68.62%), Postives = 765/940 (81.38%), Query Frame = 0


Query: 2   DENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTVHGDSAVFIAKTY 61
           D+   E  KLPE KLDA+QAQGF++FFK LP D RAVR FDRRDYYT HG++A FIA+TY
Sbjct: 4   DDFTPEGGKLPEFKLDARQAQGFISFFKKLPQDPRAVRLFDRRDYYTAHGENATFIARTY 63

Query: 62  YRTTTALRQLGNASEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSGS 121
           Y T +ALRQLG++S+ + S SVSK MFE+IAR++LLER D TLELYEGSGSNWRL KSG+
Sbjct: 64  YHTMSALRQLGSSSDGILSASVSKAMFETIARNILLERTDCTLELYEGSGSNWRLTKSGT 123

Query: 122 PGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSHF 181
           PGNIGSFED+LFANN+M+DSP IVAL P  RE+   VGL+++D+T R +GLAEF +DS F
Sbjct: 124 PGNIGSFEDILFANNDMEDSPVIVALFPACRESQLYVGLSFLDMTNRKLGLAEFPEDSRF 183

Query: 182 TNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLSR 241
           TNVESALV LGCKECLLP D  K  DL PL D ++ C V+LTE+KK++FK RDL QDL R
Sbjct: 184 TNVESALVALGCKECLLPADCEKSIDLNPLQDVISNCNVLLTEKKKADFKSRDLAQDLGR 243

Query: 242 LVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAAM 301
           +++GSVEPVRD++S F++A   LGALL+YAELLAD++NYGNY I+KYNL+ YMRLDSAA+
Sbjct: 244 IIRGSVEPVRDLLSQFDYALGPLGALLSYAELLADDTNYGNYTIEKYNLNCYMRLDSAAV 303

Query: 302 RALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAFV 361
           RALN+ E KTD NKNFSLFGLMNRTCT GMGKRLL+ WLKQPLLDV EIN+RLD+VQAFV
Sbjct: 304 RALNIAEGKTDVNKNFSLFGLMNRTCTVGMGKRLLNRWLKQPLLDVNEINNRLDMVQAFV 363

Query: 362 EDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQF 421
           ED  LRQ LRQ LKRISDI+RLT  L K+ A LQ +VKLYQS  R+P+IK  L+ Y GQF
Sbjct: 364 EDPELRQGLRQQLKRISDIDRLTHSLRKKSANLQPVVKLYQSCSRIPYIKGILQQYNGQF 423

Query: 422 SSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQE 481
           S+LI+ K++E LE W   +   +F++LVETA+DL QLENGEY IS  Y   L  LK+   
Sbjct: 424 STLIRSKFLEPLEEWMAKNRFGRFSSLVETAIDLAQLENGEYRISPLYSSDLGVLKDELS 483

Query: 482 SIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLET 541
            +E  I +LH   A+DLDL+VDK LKL+KG+  GHVFR++KKEE KVRKKL+  ++++ET
Sbjct: 484 VVENHINNLHVDTASDLDLSVDKQLKLEKGS-LGHVFRMSKKEEQKVRKKLTGSYLIIET 543

Query: 542 RKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELDV 601
           RKDGVKFTN+KLK L DQYQ +  EY + QK++V  V+  + +F+EVF   A +LSELDV
Sbjct: 544 RKDGVKFTNSKLKNLSDQYQALFGEYTSCQKKVVGDVVRVSGTFSEVFENFAAVLSELDV 603

Query: 602 LLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESWF 661
           L  FADLA+SCP PY RPDIT+SDEG+I+L GSRHPC+EAQD VNFIPNDC LVRG+SWF
Sbjct: 604 LQSFADLATSCPVPYVRPDITASDEGDIVLLGSRHPCLEAQDGVNFIPNDCTLVRGKSWF 663

Query: 662 QIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVST 721
           QIITGPNMGGKSTFIRQVGVN+LMAQVG FVPCD+ASISVRDCIFARVGAGDCQL GVST
Sbjct: 664 QIITGPNMGGKSTFIRQVGVNVLMAQVGSFVPCDQASISVRDCIFARVGAGDCQLHGVST 723

Query: 722 FMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEMIKAPTLFATHF 781
           FMQEMLETASILKGA++KSLIIIDELGRGTSTYDGFGLAWAICEHL+E+ +APTLFATHF
Sbjct: 724 FMQEMLETASILKGASDKSLIIIDELGRGTSTYDGFGLAWAICEHLMEVTRAPTLFATHF 783

Query: 782 HELTALTHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVAE 841
           HELTAL H N D   H   I GVAN+HV AHID  + KLTMLYKVEPGACDQSFGIHVAE
Sbjct: 784 HELTALAHRNDDEHQHISDI-GVANYHVGAHIDPLSRKLTMLYKVEPGACDQSFGIHVAE 843

Query: 842 FANFPSSVVALAREKAAELEDFSTDSTTSATTGKEIPSKRKREFGSEDMSKGVGRARQFL 901
           FANFP +VVALA+ KAAELEDFST  T S     E+ SKRKR F  +D+++G  RAR FL
Sbjct: 844 FANFPEAVVALAKSKAAELEDFSTTPTFSDDLKDEVGSKRKRVFSPDDITRGAARARLFL 903

Query: 902 EEFANLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQF 942
           EEFA LP+D+MD  + L+  ++++  L+KDA D+ WLQQF
Sbjct: 904 EEFAALPMDEMDGSKILEMATKMKADLQKDAADNPWLQQF 941

[Close]

BLAST of Carg17906 vs. ExPASy Swiss-Prot
Match: Q5XXB5 (DNA mismatch repair protein Msh2 OS=Chlorocebus aethiops OX=9534 GN=MSH2 PE=2 SV=1)

HSP 1 Score: 713.0 bits (1839), Expect = 4.5e-204
Identity = 395/928 (42.56%), Postives = 583/928 (62.82%), Query Frame = 0


Query: 14  LKLDAKQAQGFLAFFKTLP-PDSRAVRFFDRRDYYTVHGDSAVFIAKTYYRTTTALRQLG 73
           L+L++    GF+ FF+++P   +  VR FDR D+YT HG+ A+  A+  ++T   ++ +G
Sbjct: 9   LQLESAAEVGFVRFFQSMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68

Query: 74  NA-SEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSN-------WRLIKSGSPGN 133
            A ++ L SV +SK  FES  +DLLL R  + +E+Y+    N       W L    SPGN
Sbjct: 69  PAGAKNLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAYKASPGN 128

Query: 134 IGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSHFTNV 193
           +  FED+LF NN+M  S  +V +  +  +    VG+ YVD T+R +GL EF D+  F+N+
Sbjct: 129 LSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDSTQRKLGLCEFPDNDQFSNL 188

Query: 194 ESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLSRLVK 253
           E+ L+ +G KEC+LP      GD+  L   + + G+++TERKK++F  +D+ QDL+RL+K
Sbjct: 189 EALLIQIGPKECVLP-GGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLK 248

Query: 254 GSV-EPVRDMV---SGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 313
           G   E +   V      + A ++L A++ + ELL+D+SN+G + +  ++   YM+LD AA
Sbjct: 249 GKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAA 308

Query: 314 MRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQA 373
           +RALN+ + S  D   + SL  L+N+ C    G+RL++ W+KQPL+D   I  RL+LV+A
Sbjct: 309 VRALNLFQGSVEDTTGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEA 368

Query: 374 FVEDTALRQDLRQH-LKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYE 433
           FVED  LRQ L++  L+R  D+ RL +  +++ A LQ   +LYQ   +LP +  ALE +E
Sbjct: 369 FVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHE 428

Query: 434 GQFSSLIKEKYMECLEIWTD-NDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLK 493
           G+   L+   ++  L   TD     +KF  ++ET +D+DQ+EN E+++  S+DP LS+L+
Sbjct: 429 GKHQKLLLAVFVTPL---TDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELR 488

Query: 494 NVQESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFI 553
            +   +E+++Q      A DL L   K +KLD  TQFG+ FR+T KEE  +R   + +F 
Sbjct: 489 EIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEKVLRN--NKNFS 548

Query: 554 VLETRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLS 613
            ++ +K+GVKFTN+KL  L ++Y K   EY+  Q  +V  ++  +S + E  + L ++L+
Sbjct: 549 TVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA 608

Query: 614 ELDVLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRG 673
           +LD ++ FA +++  P PY RP I    +G IIL+ SRH CVE QD + FIPND    + 
Sbjct: 609 QLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEITFIPNDIYFEKD 668

Query: 674 ESWFQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLR 733
           +  F IITGPNMGGKST+IRQ GV +LMAQ+GCFVPC+ A +S+ DCI ARVGAGD QL+
Sbjct: 669 KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK 728

Query: 734 GVSTFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEMIKAPTLF 793
           GVSTFM EMLETASIL+ AT+ SLIIIDELGRGTSTYDGFGLAWAI E++   I A  +F
Sbjct: 729 GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF 788

Query: 794 ATHFHELTALTHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGI 853
           ATHFHELTAL +          QI  V N HV+A   ++   LTMLY+V+ G CDQSFGI
Sbjct: 789 ATHFHELTALAN----------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSFGI 848

Query: 854 HVAEFANFPSSVVALAREKAAELEDFSTDSTTSATTGKEIPSKRKREFGSEDMSKGVGRA 913
           HVAE ANFP  V+  A++KA ELE+F        + G ++    K+ +   +  + +   
Sbjct: 849 HVAELANFPKHVIECAKQKALELEEF---QYIGESQGYDMEPAAKKCYLEREQGEKI--I 908

Query: 914 RQFLEEFANLPLDKMDLKEALQQVSQLR 926
           ++FL +   +P  +M  +    ++ QL+
Sbjct: 909 QEFLSKVKQMPFTEMSEENITIKLKQLK 911

[Close]

BLAST of Carg17906 vs. ExPASy Swiss-Prot
Match: P43247 (DNA mismatch repair protein Msh2 OS=Mus musculus OX=10090 GN=Msh2 PE=1 SV=1)

HSP 1 Score: 712.2 bits (1837), Expect = 7.7e-204
Identity = 393/928 (42.35%), Postives = 580/928 (62.50%), Query Frame = 0


Query: 14  LKLDAKQAQGFLAFFKTLP-PDSRAVRFFDRRDYYTVHGDSAVFIAKTYYRTTTALRQLG 73
           L+L+     GF+ FF+ +P   S  VR FDR D+YT HG+ A+  A+  ++T   ++ +G
Sbjct: 9   LQLEGAAEAGFVRFFEGMPEKPSTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68

Query: 74  NA-SEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSN-------WRLIKSGSPGN 133
            A S+ L SV +SK  FES  +DLLL R  + +E+Y+    N       W L    SPGN
Sbjct: 69  PAGSKTLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNKAGNKASKENEWYLAFKASPGN 128

Query: 134 IGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSHFTNV 193
           +  FED+LF NN+M  S  ++ +     +    VG+ YVD T+R +GL EF ++  F+N+
Sbjct: 129 LSQFEDILFGNNDMSASVGVMGIKMAVVDGQRHVGVGYVDSTQRKLGLCEFPENDQFSNL 188

Query: 194 ESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLSRLVK 253
           E+ L+ +G KEC+LP      GD+  L   + + G+++TERK+++F  +D+ QDL+RL+K
Sbjct: 189 EALLIQIGPKECVLP-GGETTGDMGKLRQVIQRGGILITERKRADFSTKDIYQDLNRLLK 248

Query: 254 G----SVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 313
           G     +          + A ++L A++ + ELL+D+SN+G + +  ++   YM+LD AA
Sbjct: 249 GKKGEQINSAALPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELATFDFSQYMKLDMAA 308

Query: 314 MRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQA 373
           +RALN+ + S  D   + SL  L+N+ C    G+RL++ W+KQPL+D   I  RL+LV+A
Sbjct: 309 VRALNLFQGSVEDTTGSQSLAALLNK-CKTAQGQRLVNQWIKQPLMDRNRIEERLNLVEA 368

Query: 374 FVEDTALRQDLRQH-LKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYE 433
           FVED+ LRQ L++  L+R  D+ RL +  +++ A LQ   +LYQ   +LP +  ALE YE
Sbjct: 369 FVEDSELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPSVIQALEKYE 428

Query: 434 GQFSSLIKEKYM-ECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLK 493
           G+  +L+   ++   +++ +D    +KF  ++ET +D+DQ+EN E+++  S+DP LS+L+
Sbjct: 429 GRHQALLLAVFVTPLIDLRSD---FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELR 488

Query: 494 NVQESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFI 553
            V + +E+++Q      A  L L   K +KLD   QFG+ FR+T KEE  +R   + +F 
Sbjct: 489 EVMDGLEKKMQSTLINAARGLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NKNFS 548

Query: 554 VLETRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLS 613
            ++ +K+GVKFTN++L  L ++Y K   EY+  Q  +V  ++  +S + E  + L ++L+
Sbjct: 549 TVDIQKNGVKFTNSELSSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA 608

Query: 614 ELDVLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRG 673
            LD ++ FA ++++ P PY RP I    +G IIL+ SRH CVE QD V FIPND    + 
Sbjct: 609 HLDAIVSFAHVSNAAPVPYVRPVILEKGKGRIILKASRHACVEVQDEVAFIPNDVHFEKD 668

Query: 674 ESWFQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLR 733
           +  F IITGPNMGGKST+IRQ GV +LMAQ+GCFVPC+ A +S+ DCI ARVGAGD QL+
Sbjct: 669 KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK 728

Query: 734 GVSTFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEMIKAPTLF 793
           GVSTFM EMLETASIL+ AT+ SLIIIDELGRGTSTYDGFGLAWAI +++   I A  +F
Sbjct: 729 GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISDYIATKIGAFCMF 788

Query: 794 ATHFHELTALTHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGI 853
           ATHFHELTAL +          QI  V N HV+A   ++   LTMLY+V+ G CDQSFGI
Sbjct: 789 ATHFHELTALAN----------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSFGI 848

Query: 854 HVAEFANFPSSVVALAREKAAELEDFSTDSTTSATTGKEIPSKRKREFGSEDMSKGVGRA 913
           HVAE ANFP  V+A A++KA ELE+F    T+      E  +KR+      +  +G    
Sbjct: 849 HVAELANFPRHVIACAKQKALELEEFQNIGTSLGCDEAEPAAKRR----CLEREQGEKII 908

Query: 914 RQFLEEFANLPLDKMDLKEALQQVSQLR 926
            +FL +   +P   M  +    ++ QL+
Sbjct: 909 LEFLSKVKQVPFTAMSEESISAKLKQLK 912

[Close]

BLAST of Carg17906 vs. ExPASy Swiss-Prot
Match: Q3MHE4 (DNA mismatch repair protein Msh2 OS=Bos taurus OX=9913 GN=MSH2 PE=2 SV=1)

HSP 1 Score: 711.1 bits (1834), Expect = 1.7e-203
Identity = 397/931 (42.64%), Postives = 585/931 (62.84%), Query Frame = 0


Query: 14  LKLDAKQAQGFLAFFKTLP-PDSRAVRFFDRRDYYTVHGDSAVFIAKTYYRTTTALRQLG 73
           L+LD+    GF+ FF+ +P   +  VR FDR D+YT H + A+  A+  ++T   ++ +G
Sbjct: 9   LQLDSAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHREDALLAAREVFKTQGVVKYMG 68

Query: 74  NA-SEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSN-------WRLIKSGSPGN 133
            A ++ L SV +SK  FES  +DLLL R  + +E+Y+    N       W L    SPGN
Sbjct: 69  PAGAKTLESVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAFKASPGN 128

Query: 134 IGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSHFTNV 193
           +  FED+LF NN+M  S  +V +  +  +    VG+ YVD T+R +GL EF D+  F+N+
Sbjct: 129 LSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDSTQRKLGLCEFPDNDQFSNL 188

Query: 194 ESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLSRLVK 253
           E+ L+ +G KEC++P      GD+  L   + + G+++TERK+++F  +D+ QDL+RL+K
Sbjct: 189 EALLIQIGPKECVMP-GGETAGDMGKLRQVIQRGGILITERKRADFSTKDIYQDLNRLLK 248

Query: 254 GSV-EPVRDMV---SGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 313
           G   E V   V      + A ++L A++ + ELL+D+SN+G + +  ++   YM+LD AA
Sbjct: 249 GKKGEQVNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAA 308

Query: 314 MRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQA 373
           +RALN+ + S  D + + SL  L+N+ C    G+RL++ W+KQPL+D   I  RL+LV+A
Sbjct: 309 VRALNLFQGSVEDTSGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEA 368

Query: 374 FVEDTALRQDLRQH-LKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYE 433
           FVED  LRQ+L++  L+R  D+ RL +  +++ A LQ   +LYQ   +LP +  ALE YE
Sbjct: 369 FVEDAELRQNLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKYE 428

Query: 434 GQFSSLIKEKYM-ECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLK 493
           G+  +L    ++   +++ +D    +KF  ++ET +D+DQ+EN E+++  S+DP LS+L+
Sbjct: 429 GKHQALFLAVFVTPLIDLRSD---FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELR 488

Query: 494 NVQESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFI 553
            + + +E+++Q      A DL L   K +KLD  TQFG+ FR+T KEE  +R   + +F 
Sbjct: 489 EIMDDLEKKMQSTLVSAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEKVLRN--NKNFS 548

Query: 554 VLETRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLS 613
            ++ +K+GVKFTN+KL  L ++Y K   EY+  Q  +V  ++  +S + E  + L ++L+
Sbjct: 549 TVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQNAIVKEIVNISSGYVEPMQTLNDVLA 608

Query: 614 ELDVLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRG 673
           +LD ++ FA ++ + P PY RP I     G I L+ SRH CVE QD V FIPND    + 
Sbjct: 609 QLDAVVSFAHVSDAAPVPYVRPVILEKGRGRITLKASRHACVEVQDEVAFIPNDVHFEKD 668

Query: 674 ESWFQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLR 733
           +  F IITGPNMGGKST+IRQ GV +LMAQ+GCFVPC+ A +S+ DCI ARVGAGD QL+
Sbjct: 669 KQMFHIITGPNMGGKSTYIRQTGVVVLMAQIGCFVPCEWAEVSIVDCILARVGAGDSQLK 728

Query: 734 GVSTFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEMIKAPTLF 793
           GVSTFM EMLETASIL+ AT+ SLIIIDELGRGTSTYDGFGLAWAI E++   I A  +F
Sbjct: 729 GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF 788

Query: 794 ATHFHELTALTHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGI 853
           ATHFHELTAL +          QI  V N HV+A   ++   LTMLY+V+ G CDQSFGI
Sbjct: 789 ATHFHELTALAN----------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSFGI 848

Query: 854 HVAEFANFPSSVVALAREKAAELEDFSTDSTTSATTGKEIPSKR---KREFGSEDMSKGV 913
           HVAE ANFP  V+  A++KA ELE+F            E  +KR   +RE G + +    
Sbjct: 849 HVAELANFPRHVIECAKQKALELEEFQNIGKPQECDEMEPAAKRCYLEREQGEKII---- 908

Query: 914 GRARQFLEEFANLPLDKMDLKEALQQVSQLR 926
              ++FL +   +P  +M  +   +++ QL+
Sbjct: 909 ---QEFLSKVKQVPFTEMSEESITRKLKQLK 912

[Close]

BLAST of Carg17906 vs. ExPASy TrEMBL
Match: A0A6J1E222 (DNA mismatch repair protein MSH2 OS=Cucurbita moschata OX=3662 GN=LOC111430121 PE=3 SV=1)

HSP 1 Score: 1855.9 bits (4806), Expect = 0.0e+00
Identity = 937/942 (99.47%), Postives = 939/942 (99.68%), Query Frame = 0


Query: 1   MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTVHGDSAVFIAKT 60
           MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTVHGDSAVFIAKT
Sbjct: 1   MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTVHGDSAVFIAKT 60

Query: 61  YYRTTTALRQLGNASEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG 120
           YYRTTTALRQLGN SEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG
Sbjct: 61  YYRTTTALRQLGNVSEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG 120

Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSH 180
           SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSH 180

Query: 181 FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS 240
           FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS 240

Query: 241 RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
           RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300

Query: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
           MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF
Sbjct: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360

Query: 361 VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
           VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ
Sbjct: 361 VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420

Query: 421 FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
           FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ
Sbjct: 421 FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480

Query: 481 ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
           ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540

Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD 600
           TRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD 600

Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW 660
           VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW
Sbjct: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW 660

Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
           FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720

Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEMIKAPTLFATH 780
           TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVE+IKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780

Query: 781 FHELTALTHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
           FHELTAL HGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840

Query: 841 EFANFPSSVVALAREKAAELEDFSTDSTTSATTGKEIPSKRKREFGSEDMSKGVGRARQF 900
           EFANFPSSVVALAREKAAELEDFSTDSTTSATTGKEIPSKRKREFGSEDMSKGVGRARQF
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSTDSTTSATTGKEIPSKRKREFGSEDMSKGVGRARQF 900

Query: 901 LEEFANLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
           LEEFANLPLDKMDLKEALQQVSQLRDGLKKDA +SNWLQQFL
Sbjct: 901 LEEFANLPLDKMDLKEALQQVSQLRDGLKKDAANSNWLQQFL 942

[Close]

BLAST of Carg17906 vs. ExPASy TrEMBL
Match: A0A6J1JGF9 (DNA mismatch repair protein MSH2 OS=Cucurbita maxima OX=3661 GN=LOC111484889 PE=3 SV=1)

HSP 1 Score: 1840.9 bits (4767), Expect = 0.0e+00
Identity = 927/942 (98.41%), Postives = 936/942 (99.36%), Query Frame = 0


Query: 1   MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTVHGDSAVFIAKT 60
           M+ENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDY+TVHGD+AVFIAKT
Sbjct: 1   MNENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYFTVHGDNAVFIAKT 60

Query: 61  YYRTTTALRQLGNASEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG 120
           YYRTTTALRQLGN SEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG
Sbjct: 61  YYRTTTALRQLGNVSEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG 120

Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSH 180
           SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAY+DLTKRLMGLAEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYIDLTKRLMGLAEFLDDSH 180

Query: 181 FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS 240
           FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS 240

Query: 241 RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
           RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300

Query: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
           MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF
Sbjct: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360

Query: 361 VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
           VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ
Sbjct: 361 VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420

Query: 421 FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
           FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKL+N Q
Sbjct: 421 FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLRNAQ 480

Query: 481 ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
           ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540

Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD 600
           TRKDGVKFTNTKLKKLGDQYQK+VEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKLVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD 600

Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW 660
           VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW
Sbjct: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW 660

Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
           FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKA ISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKAIISVRDCIFARVGAGDCQLRGVS 720

Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEMIKAPTLFATH 780
           TFMQEMLETASILKG+TEKSLIIIDELGRGTSTYDGFGLAWAICEHLVE+IKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGSTEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780

Query: 781 FHELTALTHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
           FHELTAL HGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840

Query: 841 EFANFPSSVVALAREKAAELEDFSTDSTTSATTGKEIPSKRKREFGSEDMSKGVGRARQF 900
           EFANFPSSVVALAREKA+ELEDFSTDSTTSA TGKEIPSKRKREFGSEDMSKGV RARQF
Sbjct: 841 EFANFPSSVVALAREKASELEDFSTDSTTSANTGKEIPSKRKREFGSEDMSKGVVRARQF 900

Query: 901 LEEFANLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
           LEEFANLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
Sbjct: 901 LEEFANLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 942

[Close]

BLAST of Carg17906 vs. ExPASy TrEMBL
Match: A0A5D3DX26 (DNA mismatch repair protein MSH2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00250 PE=3 SV=1)

HSP 1 Score: 1772.7 bits (4590), Expect = 0.0e+00
Identity = 892/942 (94.69%), Postives = 917/942 (97.35%), Query Frame = 0


Query: 1   MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTVHGDSAVFIAKT 60
           MD+NVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYT H D+AVFIAKT
Sbjct: 1   MDDNVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKT 60

Query: 61  YYRTTTALRQLGNASEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG 120
           YYRTTTALRQLGNASE+LSSVSVSKNMFESIARDLLLER DHTLELYEGSGSNWRLIKSG
Sbjct: 61  YYRTTTALRQLGNASESLSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSG 120

Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSH 180
           SPGNIGSFEDVLFANNEMQDSPAIVAL P FR+NGCIVGL YVDLTKR+MG+AEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRVMGMAEFLDDSH 180

Query: 181 FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS 240
           FTNVESALVGLGCKECLLPL+SGK GD+KPLH+ LTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLESGKSGDIKPLHNVLTKCGVMLTERKKSEFKMRDLVQDLS 240

Query: 241 RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
           RLVKGSVEPVRD+VSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300

Query: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
           +RALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEI+SRLDLVQAF
Sbjct: 301 IRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF 360

Query: 361 VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
           VEDTAL QDLRQHLKRISDIERLT YLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ
Sbjct: 361 VEDTALCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420

Query: 421 FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
           FSSLIKEKY+E LE  TDNDHLNKFNNLVETA+DLDQLENGEYMISSSYD  LSKLKNVQ
Sbjct: 421 FSSLIKEKYLEFLETCTDNDHLNKFNNLVETAIDLDQLENGEYMISSSYDATLSKLKNVQ 480

Query: 481 ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
           ESIEQQIQDLHRQVANDLDL VDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540

Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD 600
           TRKDGVKFTNTKLKKLGDQYQKIVEEYK+ QK+LVHRVIETASSFNEVF+PLAE+LSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFKPLAELLSELD 600

Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW 660
           VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRG+SW
Sbjct: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660

Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
           FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720

Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEMIKAPTLFATH 780
           TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVE+IKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780

Query: 781 FHELTALTHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
           FHELTAL HGNTDL+ HGKQ+VGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAHGNTDLDSHGKQMVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840

Query: 841 EFANFPSSVVALAREKAAELEDFSTDSTTSATTGKEIPSKRKREFGSEDMSKGVGRARQF 900
           EFANFPSSVVALAREKAAELEDFSTD+T   T GKEIPSKRKREF S+DMSKGV RARQF
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSTDTTAPNTNGKEIPSKRKREFSSDDMSKGVARARQF 900

Query: 901 LEEFANLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
           LEEF+NLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
Sbjct: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 942

[Close]

BLAST of Carg17906 vs. ExPASy TrEMBL
Match: A0A5A7UX35 (DNA mismatch repair protein MSH2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003570 PE=3 SV=1)

HSP 1 Score: 1770.4 bits (4584), Expect = 0.0e+00
Identity = 891/942 (94.59%), Postives = 916/942 (97.24%), Query Frame = 0


Query: 1   MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTVHGDSAVFIAKT 60
           MD+NVDE+SKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYT H D+AVFIAKT
Sbjct: 1   MDDNVDERSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKT 60

Query: 61  YYRTTTALRQLGNASEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG 120
           YYRTTTALRQLGNASE+LSSVSVSKNMFESIARDLLLER DHTLELYEGSGSNWRLIKSG
Sbjct: 61  YYRTTTALRQLGNASESLSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSG 120

Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSH 180
           SPGNIGSFEDVLFANNEMQDSPAIVAL P FR+NGCIVGL YVDLTKR MG+AEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRAMGMAEFLDDSH 180

Query: 181 FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS 240
           FTNVESALVGLGCKECLLPL+SGK GD+KPLH+ LTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLESGKSGDIKPLHNVLTKCGVMLTERKKSEFKMRDLVQDLS 240

Query: 241 RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
           RLVKGSVEPVRD+VSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300

Query: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
           +RALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEI+SRLDLVQAF
Sbjct: 301 IRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF 360

Query: 361 VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
           VEDTAL QDLRQHLKRISDIERLT YLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ
Sbjct: 361 VEDTALCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420

Query: 421 FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
           FSSLIKEKY+E LE  TDNDHLNKFNNLVETA+DLDQLENGEYMISSSYD  LSKLKNVQ
Sbjct: 421 FSSLIKEKYLEFLETCTDNDHLNKFNNLVETAIDLDQLENGEYMISSSYDATLSKLKNVQ 480

Query: 481 ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
           ESIEQQIQDLHRQVANDLDL VDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540

Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD 600
           TRKDGVKFTNTKLKKLGDQYQKIVEEYK+ QK+LVHRVIETASSFNEVF+PLAE+LSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFKPLAELLSELD 600

Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW 660
           VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRG+SW
Sbjct: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660

Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
           FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720

Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEMIKAPTLFATH 780
           TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVE+IKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780

Query: 781 FHELTALTHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
           FHELTAL HGNTDL+ HGKQ+VGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAHGNTDLDSHGKQMVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840

Query: 841 EFANFPSSVVALAREKAAELEDFSTDSTTSATTGKEIPSKRKREFGSEDMSKGVGRARQF 900
           EFANFPSSVVALAREKAAELEDFSTD+T   T GKEIPSKRKREF S+DMSKGV RARQF
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSTDTTAPNTNGKEIPSKRKREFSSDDMSKGVARARQF 900

Query: 901 LEEFANLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
           LEEF+NLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
Sbjct: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 942

[Close]

BLAST of Carg17906 vs. ExPASy TrEMBL
Match: A0A1S3BX85 (DNA mismatch repair protein MSH2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494106 PE=3 SV=1)

HSP 1 Score: 1770.4 bits (4584), Expect = 0.0e+00
Identity = 891/942 (94.59%), Postives = 916/942 (97.24%), Query Frame = 0


Query: 1   MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTVHGDSAVFIAKT 60
           MD+NVDE+SKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYT H D+AVFIAKT
Sbjct: 1   MDDNVDERSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKT 60

Query: 61  YYRTTTALRQLGNASEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG 120
           YYRTTTALRQLGNASE+LSSVSVSKNMFESIARDLLLER DHTLELYEGSGSNWRLIKSG
Sbjct: 61  YYRTTTALRQLGNASESLSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSG 120

Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSH 180
           SPGNIGSFEDVLFANNEMQDSPAIVAL P FR+NGCIVGL YVDLTKR MG+AEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRAMGMAEFLDDSH 180

Query: 181 FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS 240
           FTNVESALVGLGCKECLLPL+SGK GD+KPLH+ LTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLESGKSGDIKPLHNVLTKCGVMLTERKKSEFKMRDLVQDLS 240

Query: 241 RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
           RLVKGSVEPVRD+VSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300

Query: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
           +RALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEI+SRLDLVQAF
Sbjct: 301 IRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF 360

Query: 361 VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
           VEDTAL QDLRQHLKRISDIERLT YLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ
Sbjct: 361 VEDTALCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420

Query: 421 FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
           FSSLIKEKY+E LE  TDNDHLNKFNNLVETA+DLDQLENGEYMISSSYD  LSKLKNVQ
Sbjct: 421 FSSLIKEKYLEFLETCTDNDHLNKFNNLVETAIDLDQLENGEYMISSSYDATLSKLKNVQ 480

Query: 481 ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
           ESIEQQIQDLHRQVANDLDL VDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540

Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD 600
           TRKDGVKFTNTKLKKLGDQYQKIVEEYK+ QK+LVHRVIETASSFNEVF+PLAE+LSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFKPLAELLSELD 600

Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW 660
           VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRG+SW
Sbjct: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660

Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
           FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720

Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEMIKAPTLFATH 780
           TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVE+IKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780

Query: 781 FHELTALTHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
           FHELTAL HGNTDL+ HGKQ+VGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAHGNTDLDSHGKQMVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840

Query: 841 EFANFPSSVVALAREKAAELEDFSTDSTTSATTGKEIPSKRKREFGSEDMSKGVGRARQF 900
           EFANFPSSVVALAREKAAELEDFSTD+T   T GKEIPSKRKREF S+DMSKGV RARQF
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSTDTTAPNTNGKEIPSKRKREFSSDDMSKGVARARQF 900

Query: 901 LEEFANLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
           LEEF+NLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
Sbjct: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 942

[Close]

BLAST of Carg17906 vs. TAIR 10
Match: AT3G18524.1 (MUTS homolog 2 )

HSP 1 Score: 1417.1 bits (3667), Expect = 0.0e+00
Identity = 690/942 (73.25%), Postives = 826/942 (87.69%), Query Frame = 0


Query: 1   MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTVHGDSAVFIAKT 60
           M+ N +EQ+KLPELKLDAKQAQGFL+F+KTLP D+RAVRFFDR+DYYT HG+++VFIAKT
Sbjct: 1   MEGNFEEQNKLPELKLDAKQAQGFLSFYKTLPNDTRAVRFFDRKDYYTAHGENSVFIAKT 60

Query: 61  YYRTTTALRQLGNASEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG 120
           YY TTTALRQLG+ S ALSSVS+S+NMFE+IARDLLLER DHT+ELYEGSGSNWRL+K+G
Sbjct: 61  YYHTTTALRQLGSGSNALSSVSISRNMFETIARDLLLERNDHTVELYEGSGSNWRLVKTG 120

Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSH 180
           SPGNIGSFEDVLFANNEMQD+P +V++ P+F +  C++G+AYVDLT+R++GLAEFLDDS 
Sbjct: 121 SPGNIGSFEDVLFANNEMQDTPVVVSIFPSFHDGRCVIGMAYVDLTRRVLGLAEFLDDSR 180

Query: 181 FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS 240
           FTN+ES+L+ LG KEC+ P +SGK  + K L+D+L +C VM+TERKK EFK RDL  DL 
Sbjct: 181 FTNLESSLIALGAKECIFPAESGKSNECKSLYDSLERCAVMITERKKHEFKGRDLDSDLK 240

Query: 241 RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
           RLVKG++EPVRD+VSGF+ A  ALGALL+++ELL++E NYGN+ I++Y++  +MRLDSAA
Sbjct: 241 RLVKGNIEPVRDLVSGFDLATPALGALLSFSELLSNEDNYGNFTIRRYDIGGFMRLDSAA 300

Query: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360
           MRALNV+ESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL+D+ EI +RLD+VQ F
Sbjct: 301 MRALNVMESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLVDLNEIKTRLDIVQCF 360

Query: 361 VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
           VE+  LRQDLRQHLKRISD+ERL + LE+RR GLQHI+KLYQS+IRLPFIK A++ Y G+
Sbjct: 361 VEEAGLRQDLRQHLKRISDVERLLRSLERRRGGLQHIIKLYQSTIRLPFIKTAMQQYTGE 420

Query: 421 FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480
           F+SLI E+Y++ LE  +D DHL KF +LVE +VDLDQLENGEYMISSSYD  L+ LK+ +
Sbjct: 421 FASLISERYLKKLEALSDQDHLGKFIDLVECSVDLDQLENGEYMISSSYDTKLASLKDQK 480

Query: 481 ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
           E +EQQI +LH++ A +LDL VDKALKLDK  QFGHVFRITKKEEPK+RKKL+T FIVLE
Sbjct: 481 ELLEQQIHELHKKTAIELDLQVDKALKLDKAAQFGHVFRITKKEEPKIRKKLTTQFIVLE 540

Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD 600
           TRKDGVKFTNTKLKKLGDQYQ +V++Y++ QKELV RV+ET +SF+EVF  LA +LSE+D
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQSVVDDYRSCQKELVDRVVETVTSFSEVFEDLAGLLSEMD 600

Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW 660
           VLL FADLA+SCPTPY RP+ITSSD G+I+LEGSRHPCVEAQDWVNFIPNDC+L+RG+SW
Sbjct: 601 VLLSFADLAASCPTPYCRPEITSSDAGDIVLEGSRHPCVEAQDWVNFIPNDCRLMRGKSW 660

Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
           FQI+TGPNMGGKSTFIRQVGV +LMAQVG FVPCDKASIS+RDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIVTGPNMGGKSTFIRQVGVIVLMAQVGSFVPCDKASISIRDCIFARVGAGDCQLRGVS 720

Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEMIKAPTLFATH 780
           TFMQEMLETASILKGA++KSLIIIDELGRGTSTYDGFGLAWAICEHLV++ +APTLFATH
Sbjct: 721 TFMQEMLETASILKGASDKSLIIIDELGRGTSTYDGFGLAWAICEHLVQVKRAPTLFATH 780

Query: 781 FHELTALTHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
           FHELTAL   N+++  +    VGVANFHVSAHID+ + KLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAQANSEVSGN---TVGVANFHVSAHIDTESRKLTMLYKVEPGACDQSFGIHVA 840

Query: 841 EFANFPSSVVALAREKAAELEDFSTDSTTSATTGKEIPSKRKREFGSEDMSKGVGRARQF 900
           EFANFP SVVALAREKAAELEDFS  S       +E   ++ RE   +++S+G  RA +F
Sbjct: 841 EFANFPESVVALAREKAAELEDFSPSS--MIINNEESGKRKSREDDPDEVSRGAERAHKF 900

Query: 901 LEEFANLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
           L+EFA +PLDKM+LK++LQ+V +++D L+KDA D +WL+QFL
Sbjct: 901 LKEFAAIPLDKMELKDSLQRVREMKDELEKDAADCHWLRQFL 937

[Close]

BLAST of Carg17906 vs. TAIR 10
Match: AT3G24495.1 (MUTS homolog 7 )

HSP 1 Score: 207.6 bits (527), Expect = 4.4e-53
Identity = 187/667 (28.04%), Postives = 295/667 (44.23%), Query Frame = 0


Query: 244  KGSVEPVRDMVSGF---EFAPAALGALLAYAELLADESNYGNYNIQKYNL-DSYMRLDSA 303
            KGS E     V G    + A +ALG L+ +   L  E    + +I  Y +    +R+D  
Sbjct: 499  KGSSESWNCAVDGLNECDVALSALGELINHLSRLKLEDVLKHGDIFPYQVYRGCLRIDGQ 558

Query: 304  AMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQA 363
             M  L +  +  D   + +L+  ++  C +  GKRLL  W+  PL DV+ IN RLD+V+ 
Sbjct: 559  TMVNLEIFNNSCDGGPSGTLYKYLD-NCVSPTGKRLLRNWICHPLKDVESINKRLDVVEE 618

Query: 364  FVEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEG 423
            F  ++   Q   Q+L ++ D+ERL                       L  IK+++ +   
Sbjct: 619  FTANSESMQITGQYLHKLPDLERL-----------------------LGRIKSSVRSSAS 678

Query: 424  QFSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNV 483
               +L+ +K ++          +  F  +V                           K  
Sbjct: 679  VLPALLGKKVLK--------QRVKAFGQIV---------------------------KGF 738

Query: 484  QESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVL 543
            +  I             DL LA+ K     +      ++++ K      +  L       
Sbjct: 739  RSGI-------------DLLLALQK-----ESNMMSLLYKLCKLPILVGKSGLELFLSQF 798

Query: 544  ETRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSEL 603
            E   D   F N        Q Q + +E       L+   IE A+ ++EV       +S L
Sbjct: 799  EAAIDS-DFPNY-------QNQDVTDENAETLTILIELFIERATQWSEVI----HTISCL 858

Query: 604  DVLLGFADLAS----SCPTPYTRPDITSSDEGN------IILEGSRHPCVEAQDWVNFIP 663
            DVL  FA  AS    S   P   P+  ++D+        + ++G  HP   A D    +P
Sbjct: 859  DVLRSFAIAASLSAGSMARPVIFPESEATDQNQKTKGPILKIQGLWHPFAVAADGQLPVP 918

Query: 664  NDCKLVRGESWFQ---------IITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASIS 723
            ND  ++ GE+            ++TGPNMGGKST +R   + ++ AQ+GC+VPC+   IS
Sbjct: 919  ND--ILLGEARRSSGSIHPRSLLLTGPNMGGKSTLLRATCLAVIFAQLGCYVPCESCEIS 978

Query: 724  VRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLA 783
            + D IF R+GA D  + G STF+ E  ETAS+L+ AT+ SL+I+DELGRGTST+DG+ +A
Sbjct: 979  LVDTIFTRLGASDRIMTGESTFLVECTETASVLQNATQDSLVILDELGRGTSTFDGYAIA 1038

Query: 784  WAICEHLVEMIKAPTLFATHFHELTALTHGNTDLEPHGKQIVGVANFHVSAHIDS----- 843
            +++  HLVE ++   LFATH+H LT       +   H +    V + H++    S     
Sbjct: 1039 YSVFRHLVEKVQCRMLFATHYHPLT------KEFASHPR----VTSKHMACAFKSRSDYQ 1064

Query: 844  ---SNHKLTMLYKVEPGACDQSFGIHVAEFANFPSSVVALAREKAAELEDFSTDSTTSAT 880
                +  L  LY++  GAC +S+G+ VA  A  P+ VV  A   A  ++    ++  S+ 
Sbjct: 1099 PRGCDQDLVFLYRLTEGACPESYGLQVALMAGIPNQVVETASGAAQAMKRSIGENFKSSE 1064

[Close]

BLAST of Carg17906 vs. TAIR 10
Match: AT4G25540.1 (homolog of DNA mismatch repair protein MSH3 )

HSP 1 Score: 204.1 bits (518), Expect = 4.8e-52
Identity = 178/631 (28.21%), Postives = 292/631 (46.28%), Query Frame = 0


Query: 280  YGNYNIQKYNLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMW 339
            Y   + +  + ++ M L +  ++ L V+++ +D +++ SLF  MN T T   G RLL  W
Sbjct: 406  YQGASFRSLSSNTEMTLSANTLQQLEVVKNNSDGSESGSLFHNMNHTLTV-YGSRLLRHW 465

Query: 340  LKQPLLDVKEINSRLDLV----------------QAFVEDTALR-----------QDLRQ 399
            +  PL D   I++RLD V                   VE+ + R             +  
Sbjct: 466  VTHPLCDRNLISARLDAVSEISACMGSHSSSQLSSELVEEGSERAIVSPEFYLVLSSVLT 525

Query: 400  HLKRISDIER-LTQYLEKRRAGLQHI-----VKLYQSSIRLPFIKNALENYEGQFS---S 459
             + R SDI+R +T+   +     + I     + L    I+   IK   E    Q +   S
Sbjct: 526  AMSRSSDIQRGITRIFHRTAKATEFIAVMEAILLAGKQIQRLGIKQDSEMRSMQSATVRS 585

Query: 460  LIKEKYMECLEIWTDNDHLNKFNNLV--ETAVDLDQLENGEYMISSSYDPALSKLKN--- 519
             +  K +  +      D+  K  + +  E AV  D L+    + SS   P L++ +    
Sbjct: 586  TLLRKLISVISSPVVVDNAGKLLSALNKEAAVRGDLLD--ILITSSDQFPELAEARQAVL 645

Query: 520  -VQESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFI 579
             ++E ++  I    +++A              +  +F  V  IT   E  V  K+  +++
Sbjct: 646  VIREKLDSSIASFRKKLA-------------IRNLEFLQVSGITHLIELPVDSKVPMNWV 705

Query: 580  VLETRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLS 639
             + + K  +++   ++    D+     E      +      +++ S +   F+   + L+
Sbjct: 706  KVNSTKKTIRYHPPEIVAGLDELALATEHLAIVNRASWDSFLKSFSRYYTDFKAAVQALA 765

Query: 640  ELDVLLGFADLASSCPTPYTRPDITSSDEG-NIILEGSRHPCVEAQDWVNFIPNDCKLVR 699
             LD L   + L+ +    Y RP+     E   I ++  RHP +E     NF+PND  L  
Sbjct: 766  ALDCLHSLSTLSRN--KNYVRPEFVDDCEPVEINIQSGRHPVLETILQDNFVPNDTILHA 825

Query: 700  GESWFQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQL 759
               + QIITGPNMGGKS +IRQV +  +MAQVG FVP   A + V D +F R+GA D   
Sbjct: 826  EGEYCQIITGPNMGGKSCYIRQVALISIMAQVGSFVPASFAKLHVLDGVFTRMGASDSIQ 885

Query: 760  RGVSTFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEMIKAPTL 819
             G STF++E+ E + I++  + +SL+I+DELGRGTST+DG  +A+A  +HL+   +   L
Sbjct: 886  HGRSTFLEELSEASHIIRTCSSRSLVILDELGRGTSTHDGVAIAYATLQHLLAEKRCLVL 945

Query: 820  FATHFHELTALTHGNTDLEPHGKQIVGVANFHVS-----AHIDSSNH-KLTMLYKVEPGA 862
            F TH+ E+  +++G             V  +HVS         S +H  +T LYK+  G 
Sbjct: 946  FVTHYPEIAEISNGFPG---------SVGTYHVSYLTLQKDKGSYDHDDVTYLYKLVRGL 1005

[Close]

BLAST of Carg17906 vs. TAIR 10
Match: AT4G02070.1 (MUTS homolog 6 )

HSP 1 Score: 203.0 bits (515), Expect = 1.1e-51
Identity = 180/642 (28.04%), Postives = 299/642 (46.57%), Query Frame = 0


Query: 260  APAALGALLAY-AELLADES--NYGNYNIQKY------NLDSYMRLDSAAMRALNVLESK 319
            A +ALG  + Y  +   DES   +  +    Y      N   +M LD+AA+  L + E+ 
Sbjct: 653  ALSALGGAIYYLRQAFLDESLLRFAKFESLPYCDFSNVNEKQHMVLDAAALENLEIFENS 712

Query: 320  TDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF-VEDTALRQD 379
             +   + +L+  +N+ C    GKRLL  WL +PL + + I  R D V     E+     +
Sbjct: 713  RNGGYSGTLYAQLNQ-CITASGKRLLKTWLARPLYNTELIKERQDAVAILRGENLPYSLE 772

Query: 380  LRQHLKRISDIERL--TQYLEKRRAGLQ-HIVKLYQSSIR---------LPFIKNALENY 439
             R+ L R+ D+ERL    +     +G     V LY+ + +         L   +   E  
Sbjct: 773  FRKSLSRLPDMERLIARMFSSIEASGRNGDKVVLYEDTAKKQVQEFISTLRGCETMAEAC 832

Query: 440  EGQFSSLIKEKYMECLEIWTDNDHLNKFNNLV---ETAVDLDQLENGEYMI-----SSSY 499
                + L  +     L + T    L   ++ +   + A D  +  N   +I        Y
Sbjct: 833  SSLRAILKHDTSRRLLHLLTPGQSLPNISSSIKYFKDAFDWVEAHNSGRVIPHEGADEEY 892

Query: 500  DPALSKLKNVQESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVR 559
            D A   ++  + S+++ +++  R++  D  +     + + K             E P+  
Sbjct: 893  DCACKTVEEFESSLKKHLKE-QRKLLGDASI---NYVTVGKDEYL--------LEVPESL 952

Query: 560  KKLSTHFIVLETRKDGV-KFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEV 619
                 H   L + K GV ++    +KKL  +  +   E ++  K +  R+I       E 
Sbjct: 953  SGSVPHDYELCSSKKGVSRYWTPTIKKLLKELSQAKSEKESALKSISQRLIGRFCEHQEK 1012

Query: 620  FRPLAEMLSELDVLLGFADLASSCPTPYTRPDI---TSSDEGNIILEGSRHPCVEAQDW- 679
            +R L    +ELDVL+  A  + S      RP I   TS    ++   G  HP +      
Sbjct: 1013 WRQLVSATAELDVLISLAFASDSYEGVRCRPVISGSTSDGVPHLSATGLGHPVLRGDSLG 1072

Query: 680  -VNFIPNDCKLVRGE-SWFQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVR 739
              +F+PN+ K+   E + F ++TGPNMGGKST +RQV + +++AQ+G  VP +   +S  
Sbjct: 1073 RGSFVPNNVKIGGAEKASFILLTGPNMGGKSTLLRQVCLAVILAQIGADVPAETFEVSPV 1132

Query: 740  DCIFARVGAGDCQLRGVSTFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWA 799
            D I  R+GA D  + G STF+ E+ ETA +L  AT  SL+++DELGRGT+T DG  +A +
Sbjct: 1133 DKICVRMGAKDHIMAGQSTFLTELSETAVMLTSATRNSLVVLDELGRGTATSDGQAIAES 1192

Query: 800  ICEHLVEMIKAPTLFATHFHELTALTHGNTDLEPHGKQIVGVANFHVSAHID---SSNHK 859
            + EH +E ++    F+TH+H L      + D + + K    V+  H++  I        +
Sbjct: 1193 VLEHFIEKVQCRGFFSTHYHRL------SVDYQTNPK----VSLCHMACQIGEGIGGVEE 1252

Query: 860  LTMLYKVEPGACDQSFGIHVAEFANFPSSVVALAREKAAELE 862
            +T LY++ PGAC +S+G++VA  A  P  V+  A  K+ E E
Sbjct: 1253 VTFLYRLTPGACPKSYGVNVARLAGLPDYVLQRAVIKSQEFE 1271

[Close]

BLAST of Carg17906 vs. TAIR 10
Match: AT4G02070.2 (MUTS homolog 6 )

HSP 1 Score: 203.0 bits (515), Expect = 1.1e-51
Identity = 180/642 (28.04%), Postives = 299/642 (46.57%), Query Frame = 0


Query: 260  APAALGALLAY-AELLADES--NYGNYNIQKY------NLDSYMRLDSAAMRALNVLESK 319
            A +ALG  + Y  +   DES   +  +    Y      N   +M LD+AA+  L + E+ 
Sbjct: 650  ALSALGGAIYYLRQAFLDESLLRFAKFESLPYCDFSNVNEKQHMVLDAAALENLEIFENS 709

Query: 320  TDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF-VEDTALRQD 379
             +   + +L+  +N+ C    GKRLL  WL +PL + + I  R D V     E+     +
Sbjct: 710  RNGGYSGTLYAQLNQ-CITASGKRLLKTWLARPLYNTELIKERQDAVAILRGENLPYSLE 769

Query: 380  LRQHLKRISDIERL--TQYLEKRRAGLQ-HIVKLYQSSIR---------LPFIKNALENY 439
             R+ L R+ D+ERL    +     +G     V LY+ + +         L   +   E  
Sbjct: 770  FRKSLSRLPDMERLIARMFSSIEASGRNGDKVVLYEDTAKKQVQEFISTLRGCETMAEAC 829

Query: 440  EGQFSSLIKEKYMECLEIWTDNDHLNKFNNLV---ETAVDLDQLENGEYMI-----SSSY 499
                + L  +     L + T    L   ++ +   + A D  +  N   +I        Y
Sbjct: 830  SSLRAILKHDTSRRLLHLLTPGQSLPNISSSIKYFKDAFDWVEAHNSGRVIPHEGADEEY 889

Query: 500  DPALSKLKNVQESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVR 559
            D A   ++  + S+++ +++  R++  D  +     + + K             E P+  
Sbjct: 890  DCACKTVEEFESSLKKHLKE-QRKLLGDASI---NYVTVGKDEYL--------LEVPESL 949

Query: 560  KKLSTHFIVLETRKDGV-KFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEV 619
                 H   L + K GV ++    +KKL  +  +   E ++  K +  R+I       E 
Sbjct: 950  SGSVPHDYELCSSKKGVSRYWTPTIKKLLKELSQAKSEKESALKSISQRLIGRFCEHQEK 1009

Query: 620  FRPLAEMLSELDVLLGFADLASSCPTPYTRPDI---TSSDEGNIILEGSRHPCVEAQDW- 679
            +R L    +ELDVL+  A  + S      RP I   TS    ++   G  HP +      
Sbjct: 1010 WRQLVSATAELDVLISLAFASDSYEGVRCRPVISGSTSDGVPHLSATGLGHPVLRGDSLG 1069

Query: 680  -VNFIPNDCKLVRGE-SWFQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVR 739
              +F+PN+ K+   E + F ++TGPNMGGKST +RQV + +++AQ+G  VP +   +S  
Sbjct: 1070 RGSFVPNNVKIGGAEKASFILLTGPNMGGKSTLLRQVCLAVILAQIGADVPAETFEVSPV 1129

Query: 740  DCIFARVGAGDCQLRGVSTFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWA 799
            D I  R+GA D  + G STF+ E+ ETA +L  AT  SL+++DELGRGT+T DG  +A +
Sbjct: 1130 DKICVRMGAKDHIMAGQSTFLTELSETAVMLTSATRNSLVVLDELGRGTATSDGQAIAES 1189

Query: 800  ICEHLVEMIKAPTLFATHFHELTALTHGNTDLEPHGKQIVGVANFHVSAHID---SSNHK 859
            + EH +E ++    F+TH+H L      + D + + K    V+  H++  I        +
Sbjct: 1190 VLEHFIEKVQCRGFFSTHYHRL------SVDYQTNPK----VSLCHMACQIGEGIGGVEE 1249

Query: 860  LTMLYKVEPGACDQSFGIHVAEFANFPSSVVALAREKAAELE 862
            +T LY++ PGAC +S+G++VA  A  P  V+  A  K+ E E
Sbjct: 1250 VTFLYRLTPGACPKSYGVNVARLAGLPDYVLQRAVIKSQEFE 1268

The following BLAST results are available for this feature:

BLAST of Carg17906 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023250.1	0.0e+00	100.00	DNA mismatch repair protein MSH2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6589561.1	0.0e+00	99.58	DNA mismatch repair protein MSH2, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_023516636.1	0.0e+00	99.58	DNA mismatch repair protein MSH2 [Cucurbita pepo subsp. pepo]	[more]
XP_022922057.1	0.0e+00	99.47	DNA mismatch repair protein MSH2 [Cucurbita moschata]	[more]
XP_022987300.1	0.0e+00	98.41	DNA mismatch repair protein MSH2 [Cucurbita maxima]	[more]

BLAST of Carg17906 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24617	0.0e+00	73.25	DNA mismatch repair protein MSH2 OS=Arabidopsis thaliana OX=3702 GN=MSH2 PE=1 SV...	[more]
Q9XGC9	0.0e+00	68.62	DNA mismatch repair protein MSH2 OS=Zea mays OX=4577 GN=MUS1 PE=3 SV=1	[more]
Q5XXB5	4.5e-204	42.56	DNA mismatch repair protein Msh2 OS=Chlorocebus aethiops OX=9534 GN=MSH2 PE=2 SV...	[more]
P43247	7.7e-204	42.35	DNA mismatch repair protein Msh2 OS=Mus musculus OX=10090 GN=Msh2 PE=1 SV=1	[more]
Q3MHE4	1.7e-203	42.64	DNA mismatch repair protein Msh2 OS=Bos taurus OX=9913 GN=MSH2 PE=2 SV=1	[more]

BLAST of Carg17906 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E222	0.0e+00	99.47	DNA mismatch repair protein MSH2 OS=Cucurbita moschata OX=3662 GN=LOC111430121 P...	[more]
A0A6J1JGF9	0.0e+00	98.41	DNA mismatch repair protein MSH2 OS=Cucurbita maxima OX=3661 GN=LOC111484889 PE=...	[more]
A0A5D3DX26	0.0e+00	94.69	DNA mismatch repair protein MSH2 isoform X1 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5A7UX35	0.0e+00	94.59	DNA mismatch repair protein MSH2 isoform X1 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BX85	0.0e+00	94.59	DNA mismatch repair protein MSH2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494...	[more]

BLAST of Carg17906 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18524.1	0.0e+00	73.25	MUTS homolog 2	[more]
AT3G24495.1	4.4e-53	28.04	MUTS homolog 7	[more]
AT4G25540.1	4.8e-52	28.21	homolog of DNA mismatch repair protein MSH3	[more]
AT4G02070.1	1.1e-51	28.04	MUTS homolog 6	[more]
AT4G02070.2	1.1e-51	28.04	MUTS homolog 6	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 911..931
None	No IPR available	COILS	Coil	Coil	coord: 553..573
None	No IPR available	COILS	Coil	Coil	coord: 473..493
None	No IPR available	GENE3D	1.10.1420.10		coord: 523..616 e-value: 1.4E-8 score: 37.1 coord: 294..522 e-value: 2.4E-58 score: 200.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 862..890
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 876..890
None	No IPR available	CDD	cd03285	ABC_MSH2_euk	coord: 630..861 e-value: 9.86134E-149 score: 437.193
IPR000432	DNA mismatch repair protein MutS, C-terminal	SMART	SM00534	mutATP5	coord: 659..858 e-value: 1.2E-117 score: 406.9
IPR000432	DNA mismatch repair protein MutS, C-terminal	PFAM	PF00488	MutS_V	coord: 662..861 e-value: 4.7E-81 score: 271.3
IPR000432	DNA mismatch repair protein MutS, C-terminal	PROSITE	PS00486	DNA_MISMATCH_REPAIR_2	coord: 740..756
IPR007696	DNA mismatch repair protein MutS, core	SMART	SM00533	DNAend	coord: 314..642 e-value: 9.1E-104 score: 360.7
IPR007696	DNA mismatch repair protein MutS, core	PFAM	PF05192	MutS_III	coord: 300..606 e-value: 9.3E-36 score: 124.4
IPR036678	MutS, connector domain superfamily	GENE3D	3.30.420.110	MutS, connector domain	coord: 122..291 e-value: 2.3E-46 score: 159.6
IPR036678	MutS, connector domain superfamily	SUPERFAMILY	53150	DNA repair protein MutS, domain II	coord: 146..309
IPR011184	DNA mismatch repair Msh2-type	PIRSF	PIRSF005813	MSH2	coord: 6..942 e-value: 0.0 score: 1241.2
IPR007695	DNA mismatch repair protein MutS-like, N-terminal	PFAM	PF01624	MutS_I	coord: 23..128 e-value: 5.0E-13 score: 49.3
IPR007861	DNA mismatch repair protein MutS, clamp	PFAM	PF05190	MutS_IV	coord: 469..565 e-value: 5.2E-19 score: 68.4
IPR007860	DNA mismatch repair protein MutS, connector domain	PFAM	PF05188	MutS_II	coord: 144..283 e-value: 5.8E-17 score: 62.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 617..939 e-value: 3.6E-100 score: 336.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 616..862
IPR016151	DNA mismatch repair protein MutS, N-terminal	GENE3D	3.40.1170.10	DNA repair protein MutS, domain I	coord: 7..121 e-value: 2.1E-33 score: 116.8
IPR032642	DNA mismatch repair protein Msh2	PANTHER	PTHR11361:SF35	DNA MISMATCH REPAIR PROTEIN MSH2	coord: 24..924
IPR045076	DNA mismatch repair MutS family	PANTHER	PTHR11361	DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER	coord: 24..924
IPR036187	DNA mismatch repair protein MutS, core domain superfamily	SUPERFAMILY	48334	DNA repair protein MutS, domain III	coord: 297..611

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17906-RA	Carg17906-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043570	maintenance of DNA repeat elements
biological_process	GO:0045128	negative regulation of reciprocal meiotic recombination
biological_process	GO:0006301	postreplication repair
biological_process	GO:0006290	pyrimidine dimer repair
biological_process	GO:0006298	mismatch repair
cellular_component	GO:0032301	MutSalpha complex
cellular_component	GO:0032302	MutSbeta complex
cellular_component	GO:0032300	mismatch repair complex
molecular_function	GO:0032357	oxidized purine DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0032143	single thymine insertion binding
molecular_function	GO:0032142	single guanine insertion binding
molecular_function	GO:0000406	double-strand/single-strand DNA junction binding
molecular_function	GO:0032405	MutLalpha complex binding
molecular_function	GO:0032137	guanine/thymine mispair binding
molecular_function	GO:0000400	four-way junction DNA binding
molecular_function	GO:0032181	dinucleotide repeat insertion binding
molecular_function	GO:0008094	ATP-dependent activity, acting on DNA
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0030983	mismatched DNA binding