Carg17862 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg17862
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Signal recognition particle subunit SRP68
Location	Carg_Chr10: 4518568 .. 4528081 (-)
RNA-Seq Expression	Carg17862
Synteny	Carg17862

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGATTTTGTCCTTTCCATTGAAAGAAACCCAATTTTGGCAAGAACACTACCAAATCTGCGAACGGTTCGAGTCACAGAGGCAATCCGAGGATTCGCAGCAGCCGTCGCTACTTCCCACAGATCGCCAGGGCAGTTGTAGAGACCTGAAGTAAGCATTCTGATTCCCCCGCAAATGAATCTCAGATTCCGATCCCTAGGGCCTGTTTCAGCATTTCTCCGGCCGGTCAAGTCGGAATCCATGGATATAGCTTCATTCATTGGCAGTTGTGTAACAATTTTGTAGTCTGATGGTTTCTTTTCGTGTTTTTTTAAGGTCCGGATTGCGAAGTAGAGGCAAATGGCGTCCATGGAAGTCGACAGCGCTAACTCCAATGCTTCTGACCCTGATAATCCTAGATTTTCCGTCAACGGTATGCTCTTGTCAATTGCTGTTGTTTCCTTCATTGATCTTGAGAAACTGTTCGAGTTTTTTCGTGTTTTAAACTTCGTCTGGTGTGTTCATTTTGCCCATTTTATCAGCTTTGGCAAATTTCATCACGCTAGACTTATTTATTTATTTATTTATGTTGACGGTGCATTTCTGTTTTCATTTTATTTGTTTTTGAAGTATTGCAGCTCTTGAAATCTGCTCAGATGCAGCATGGATTGCGTCATGGAGATTATACTCGCTATCGGTTGGTGCAAACGCGTTTTGTATAAATCTGACTTTATTGATAAGTTGTTACGCTGTCTTAGTTTCATACTTCCAATTATGCTAGCGTTTATAGCGTTCTGGAGTTCTCTTGATTGCGTAGGCTGCTGATTGTTGGTAGATTTATTATTATTATTTTTGATGCGTAGGAGGTATTGCACAGCTCGGCTAAGGAGGCTGTATAAATCTCTGAAGTTCACTCATGGTCGTGGAAAGTACACCAAACGAGCCATAACTCAGTCAACTGTTAGTGAAGTCAGGTTTGTCCCATTTATAGTTTTTTGCAAGCAGAGAGTAACATTCAATTCTTCACATATTTACGTTTTGTATCTTTAATCCCTTCTTGGATTTACACTTCGAATTCGTCTCCTCCTGTTATTGCCTACAAAATGTTGCACTCTAGAAATTGTTAACAAAGTGGTCAATTATGTTTCCCCTTAATGTACACTGATTCTAATGAAGTGGGAAGGAAAAGTGGAAGAGAAAGAAGATGATCAAGTGGTAAATAATTTGACGATTGTTAGAATCTTATGATATGAGTTCAGATGTAGTGGCACGGGTATTTTTAGATTGGAATGTGTCTGTGAAGATAAATACATTGCAAAAATCATTATGAATAAAGTGTTAAACTATCAACTTCTGGATTTAAAATAGGTTTCTCCATGTGGTTCTTTATATGGCGGAGAGAGCATGGAGTCATGCTATGGAGAAAAGGCAATTACCAGCGGGTCCAAATGCACGCCAGCGTATCTATTTGATTGGTAGGCTCAGGAAGGCGGTAAAATGGGCCACTCTCTTTGCACAATTGTGTGCAAGCAAGGGAGATTCAAGAACGTCTTTGGAAGCAGAGGTGTGATCCTAGTTTTTTTCCTTATGAAATATAAATCACATATGATATTCTTTTAACCTTGAAATTTTAAACTTAGTGAAGAGTGATTTTTCATCATCTTTTGCTTCTCAGCTGGTAACTATTTGTTCCTATATGTAGGCTTATGCATCGTATATGACTGGGAACTTGTTGTTTGAACAAGATCAGAATTGGGACACTGCATTACTGAACTTCAAAAGAGCTAGGTGCTTCCTTGTATTTTCCTGATCGTTAATTTCCTTGTTAAACTGAACAACTAATTCTTGAATGACCTTCTCTTTTCGGGCTAGGATGCATTATGCAAATAATTCTCTATGGATGCTGTAATAGTTTATTTTTGTTTTTGTATTTCTTTTCCCATACTCTATATAAGAAAGGCCTATAATCCATTAGAGAAACATGGTCACTGCCATTCTAGGAAAGTTTGGAAGACACAGAGTAGATATATTCTTTATGATAATATGGGGCCTTTAGAAGAGATCTGGTATGGAACCAGGTTTATTGCCTCTATTCAAGCTTTCAATTCCCACAAATTCTTCCCTCTTCATCTCCTTCCACTGAAAGTTCTATCTTGTTCCAACCAAATTTCCCACAAAATGACCCTAGAGCATTAAGTGAGAGAGTCCTCGTCTTGTCTTGAGGCTTTGAACCCTAAAGGAAAGGAGGATTGAAGGGCTTTGGCGATCCTCAAAGGTTGGGTAAGCCAACACTAAAAGGATCATTAAAGCTTCAGTGTGTAAGTGCAGCTGATGAGAATGTGACTTGCATTTTGATTTCTTACTGCTGAAGATGACTCTAAGATAAAAAGAAGAAAATTTTAATTTATCTACGATTTCTACTGTTATCCATGTGTAAAGAATCCAAAAACTGTTAAGGACACTTGATTTCCTAAAGGCCCTGCGTCATTTATCATCTCATTTTGATTTTTTCAGATAACTTATTAGGTAATGTTTTGTTTACCTTTCAGAGCGGTTTATGAAGAACTTGGGAAAGTAGGAGACCTAGAGAATCAAGTTTTGTGTCGTGAACGTGTAGAGGAGCTAGAACCTAGTATACGATACTGCTTGCACAAGATAGGGAAGTCAGATCTACAGGCTTCTGAACTTTTACATATTGGGGAGATGGAAGGTCCTGCTCTAGACCTGTTCAAAGCTAAATTAGAGGTATGTTTGCTTGCTTTTTACTTTCAAGTTTATGAATTGTCATTTTTGCTCCAATTTTATTTTTATTTATAACTATATCCAATGTATCTATGTAGGAGCATCATAAATTAAAAAAACTTACTGAAAGATATCTGTTCAACTGACAAAAGTCCGACTCAAATTGGTTTTCACAGTTTACAAGAATTCATTTTTCTTGTTGATTTTGGTGTTTCTTTTACTGCGAAGTTGTTTTGTTTTCAATGAAGATATGTATAAGTTTTCAGGAAAGTTTTGAAGGCCTTGGTTTAAGTTTACTTGGTTATAGAGTACTACTTTGGAAAAATTATCTTTTTGGTCCTCAAGTTTTTAGAAATAGGTTCATTTGGTCCTCCGAGTTTCCAAAATGTGCATTTTTAGTTCTTGAGTTTTGAGAAATAGGTTTTACAGGTCATTGAATTTTCAAAAATTAGTATAAAAGTTCCCGACGTTACTTTTTCATTTGCTACAGTGACATTTTAAAAAAAAAAAGTGAGTTAATTTTTTTAACGTTGATGTGAAATTTGAAATAAAGAATATAAAATAGATCTCTTTCCTCTCTCACTCTTTTCGGCTGGACTAGAGGCATCGTCTCCTTGATCAGGGGTAAAGGCTGGAGCTTGGTGGCGGTGGTGTAGGGTTGCGGGAGTTGACGAGAGCAATGATTCCGAGATGGTGGAGGATAGGAATTGTTTTGTTCTTTTCTGAGTTCGGTCTAAAATAGTGAATTTAGCCTCAGCTTGTATGTGAAATCGCGACAACCCACAAAACTTAAGGCCAATGGGTCAATGGAAACTAGGGGAAGTAGACGGTTGGCATGCGGGACACTGGATCATGCGGTAGAGGGATGGAAAGTGGTGGCATTTGGAATTGGGCGGTCGAGAGATTTAGTTGATATTCGGCAAGGAATGAACTTTGAGCAAGTCTGGCTTTGGCAATACCAAATTGTCGTCACCAATGTCAAGTGCTTGTGAAAATTAACCATCAACAGGGACTGCTCCCCTGTGGCAACCCTTTGCAGTTAAGAGAGAGAATTGGAAGATAGAGGATAAAGAAGGGAGGGAGGAGATAGGAGAGAGAATGTGGAGAGAGGGAGAGAGAAATTACTTTATTTATTTATTTATTTTTAATTTCAAACGCCAGGTTAGAATTTAAAATAATAAAAAAATTTGTTCCTTCAGCAAATGGAAAACGTAATGCCCAAAGGCATTTTAAACCTATTTCTTAAAACTTAGGGACTAAACACATTAGAAATTTGGGGCACAACGCAAACCTATTCCTTAAAACTCTGGGACCAAAATGAAAAATTTACTTCTGCTTTTAAAATGTTGTGGCATCAACAAAGTCTTGCTTTTATTTTATTTGGAGAGCTTTTCATCTAAGGACAATTTCTATTACCTAGACAATATTTTTCTTATCTACCTTTCTTTTTGATCTCAGTATAGATATGGATGTTTGGACCTGCGGTTGTATAACCTATGCTTTCATTTTCTCAATGAAAGCTTGACTTTTAGTAGAAAAAAAGGTCTTATAGCCATCATTTATTGTTAGGTTGACCGTAGCCCTGAGAACACTGCCTGTTATTGAAAGAACCTCAGAAATATTCTTCAACTGCAAACTATTTGACTGCTCAGGTTTTCAGTAAAAAAACTGAACTTTCATAACGGTGGTGATGTTTTTTCTCTTGTTCTGTGTTTGGTTGATCTGATAATGTCTTTACTCTTTTAGTCTATTAGCGGTCTTAGTTTATTTTATATTCTCGTTCTTTCTTGCTTGTAGGCCGTCATGTCGGAGGCCAGATCTCAGCAGGCTGTTTCCATGACCGAGTTTCACTGGCTTGGTCATAGGTTTCCAATATCCAATGCAAAAACCAGAGTTGCCATATTAAAAGGTTGGTGTTTGTTTTTATACATCATTTAAATATTGAGATTTATGATGATTTTCCTCGGTTAGGAACTTATATGCTAACCACCTAAAATTAAATGGCCTGTTTATATATGTTCCAAAACAAAAAAAAAAAATTATTGGTTTCTAAAATTTTTAGATGCATTATTTGGGTTGTCTAGAACTGAGGGTGTTTGGGGGACAGTTGACGTAGGATAAAGGGGAGATTTTCTAGTTGGAGAAACTTCTACTTATCTGGAACAGGATGACTATAATTCTTTTGGTTTTTGTCTATATCCCTATGGGTTTCATGTCCATATTGGAAACAGTCATGTCTATATCCCTACGGATCTCATGTACATAGAAAAGGGATTGGGGGTGTTGGGAGTGAAGAAATCTTGTTACTTCCATCTATGATGATTGGGACGTTTACCTTATGTTATAAAGATTCTTTCATGGAATGTTAAGTGGCCTTGAGGATATAGAAAGAGGAGTTTGGTACGCAATGCTATTTAGACATTCTGATTCAAATATGCTCTCTCTCAATAAACTGAAGTTCCCATGGTAGATAGAGCTCATCTTATGACTATTTACTCATCTCAAATGGAGTGGTTTTTTTAGCTTTGAAAGAGCTGCTCTTGGTATTCATGTTCCGTGGAAGAAAATTCTATATTGATTTGCAAAGTCCTCATTTTTGCTTTCCGTAAATGTTTTTTATAATGATAACACTACTACTGTTGGTATGGTTGGAATATTCTTTGAGTTGGAGGAAATCTATGATTTCTATGGTCTTTGTCATAGTTGCTGGTGCGTTGGAGGTGGTAATTTTGACGATGTTATGTGGATAAAAGGTGGATTTCTGAAACCCATCGAGAGGATACTCAAATCATTGAACTTTTTGACATTGCTTATTGGTGATCAAGTTCCAAATGATATTTGTCTATCACGTGGCTTCTTTTCCTGATCTAACGAGGCAAAGACCCATTCTTTCTCTTATCAATTAGTTTCATTGAGAAGTGCCTAGGTGGGCTGAATATGTGGAAAATCTGGATGCAGTCCAACTCTGTAACGGCAAAAGCAGTCTATGATGGGAGTAAGATCTAAGTGGTTTTTTCTCGGCAATATCCACTTTCTAACAACTTACTAAACCTAAAGCCAAGATGAAAACCCCTGGTGCACTATACTTGGAAATCTAAACCTCCAAAGAAAGTAAAGTTCTTCATTTGATCTCTTTTTCATAGAAACCTGAAGTCCTTAATACTGTGGATAGGTTACCGAGAAAATTTCTAAGTTGAGCTCCATCTTCCTTGGTTATGGGTTGATTTCTTTTCACTCTTTCGAAGTTTACTTGATCTAATGAAAGTTACTCTTGTTTCCTCTCTTAACTAGTTGTCTTTTTGTTTTCTATCCTCCATTCTTTCCTTTTCTATTTTTCTCAACCACAGAGTCCTCTTTCTATTTTACTTGGTTATAATGTATTTATGTATAATATGTGGTTAGCATTTTTTATATGTGCTGGTGTCTAGGCTCTCTGTTAATTTTATATTGATTACACTTGGAAGAGTTTGGCTTGATAATAAGTTGCAAAACATATTCCTATATAACTCATTATTATGTTGTATTTTCTAGGAATCCGTCGAGGATATGCCCTTACTGATGTGCATATTTTCATTTTGCACTTTTTTCATCCAGATTTCCTTATTATTTTGTATTTTCTAGGAATCTGTAGTAGTGTGCCCTTACCATCACGTGCATATTTCCATTTTGCACTTTCTTCATCCATAATTTCTAATTATGTCTGCATGAAATTATCTAGCTCGGGAATTAGAAAAGGACTTGCAAGGTTCAGCAGATTCACTTCCTGCAGAGAAAAGATTGTCCATTTTTGATAAGATCTTTGCAGCCTACCATGAGGCAAGGAGCTCCATTCGCAGTGATTTGGTATGTGGAAGATTGACAGTAGCCTTTCTTTGGATTCTTTAGTGTGTTTGTGTCTCTTCTAATTTGATCTTCCAGGCTTAAACGTTTCTGATTCTGTTTGTTTAGGTCAGTGCTGGAAATGCTGAAAATGTTAAAGATGATTTAAGTGGGCTTGATAAAGCTGTTAGTGCAGTGTTGGGTCAAAGGACAATAGAACGCAACCAGTTATTGGTAAAAATTGCAAAAAGTAAGCTTGTTAGGCGTCATGATGAAAAAAATGAGAAAGTTACCAAGCCGGAGGAACTTGTTCGCTTGTATGATCTCTTATTACAAGTAAGCATCTTTTTGCATTCTTGTATCCTTTTCATTATTTGAAATGATCCAACTGTTCTGCTCGACTAAAAACAGAGGTTTTTCTGGAGGGTTTAGCAATAGCTATATATAATTTTTGTTCTCAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTCTTTTGCAGAATATTGCTGATCTTTCTGATTTAGTCAGTTCTGGAAGAGATAGGAGGCAGGAAGAAGTAGCGTTTGCTGAGGAGTGCTCGCTTAAAAGCATAGCTTTCCGTGGAGAAAGGTTTCTGCCCTTGAGTTCCTAATCTTTCTTGCTGATCAGAAAAACCTCCATATTTACATTGATAATCCCAATTTGCATTCTGGATTACCTGTTCTCTTTTCGAGCATAGAAATCTTTTTGTTCTTTTAATCCTTGTAAATTTGCTCATAATGCGTTAGATTCCCCGCCATTTTCCTTGACCCTATAACTCATTGCTTTTAGCTGTATCCTGCACCTTGTTTGCTTTGCATTCTCTTGTTCTATTTAACCTGTCGAGGTGATATTATGCCAGCGTTGACATTCATTCTCAGGCGCATCTCTTTGGAGTATCATATGGACATATCATTTTGTTTATAGATTTTTTAATTTTTAAAATTTTTTTACAATTATCATCAGTGTTATTAGTGTTGAAGATGATGCGATTTTCAGAACTTACTGATAAGAGACAAAAATAGAAAAGTTAGCAAAACATCCGTGTAATAGTGTCTAAAACTTATTCAACCCTTGGAAACCATGTAGCACGTGTGATACAGTTAGTCTCCCCTCACCCTCCCAACCAATAAAAAACAAATTAATTCACTCTTTTCATTTCCAAAAGTGTGTAAGAATAAATGGTGTCTGGGTTGAGAACATTCTTTCCTTGGCCCCTGCGCATCTTGTCATTACATTTGATCTTCCCTCTTGTTTATATGTCATTACTCAAGAGTAGATCAATTGATGTTTGCTGACACTAGGTTGCTGTACATGATAGATCCTCCTCTGTATATTTTCAGGTGCTTTTACTTGGCAAAATCATACAGTTTGGCTGGAAAAAGAGCCGAAGCTTATGTACTTTATTGCCATGCTCGCTCCCTTGTTGAAGATGCCATACAAAAATTCCGTACAGAAAATATCAGCGATCCGGTATGTGTATCATGTAGACCACTCTGGTAGCATACTAGGCAGAACATCCAACCACTTGTCTTATGGGTTCAACATTATTTTATTATCTTCGGTAGTTTTCACTGCTGTAGCTTGTTGCATTGCAATAGTCTGTTGGTGGATCTTCACTTCCCTTTGAGGAATATTTTCTGATCTTGTTGAGGTCTATAAACTTTAAGATTACGTTTTAAAAGCGAGCAAAAATTCAGAGAAAACGCCTCCTCTTTGTTTCTTTTAGTTTGTTTTCACCAACAGTAGTTCTTCAGAACAATTGAAATTGTTTTTTTACTTTTTTTAAAGAACCTCTGCTTTATTTCTTTCAACAGAAGATAATCGAAGAGTTGAAAACATTGATCGAGGAATGCAGAGCCAACAGTTGTATAGAGCATGCAACTGGAATTATTGAGGAGGTGAAGGCTCCAGAGAATCTGTCGAAGAAGATCTCTAACATATCATTGACTGGAGCAGAGAAGAAGGTACTTATAACATTCGTTCTGTCTGTATCTTCCTTTTTAAGCTGGAACAAAACTGAATGAACTTGAATTACTTAGTTCTGGATGCAATAATACTCACTGGACGATGAAAATCGAGAGACCGCTTAAAGGACGATTAACCAAAAGAATCGACCTAAGTAAATCTTTGAGCATGTTTGATCGCTTTCCTGTTGTATAGATACACCTAGTTCTTATTTCTTCCTTAGCCAAGCCATGTTTTCGGGAGCACACAGTTCTTATTTTAGTTTATAGCTTGCATGGATGCTAACATCTATCAAATCCATCTTCAATATGTTACAGTCGGTCAAATACCTCCTTCAGAGCCTCGATAACTATGAGTCTGCAGTTGGCGATTCGAACATCAAGACTGCTCCATGCATTGAAGCCTTTCCCCCCGCGTTTCGGGCAATCCCTCGGAATCCCATTGTTCTGGACCTTGCTTTTAACTACATTGACTTCCCATCTCTTGAGAATAGAATGAAAAAGGACAGAAAGGGCTTTATCAGTAGGCTATGGGGATGAGTTTTCCTTTGCCAAGATTTTGTTTTCACTTACGGTCTCTTAAACAACTTCCCAGCCCTCATTGCATGAATTTTGGGTCACAATGAGAAAGGAATGACTGTTTGTTTCTTGTGTTTCTCTCAGATGAACAACAAAGATATAGGACCAATTTTCCAGGACTTTTTTTTTTTTTGGAGGGCTGCGTGTGACTGTTGCAGAATACACATTATTTATCTTCTGATTTTGGCTATTAACTTTGAATTTATTGTGGATATTTTAGAAGTTTATTTGTAGATTGTCACAAAATAACTATTTAACACACCTTATGGATGATTGTATTGATTTGGCCTATGTTGTTAAGCTACAATTAGAGACCTAGGTTTTACGAGATCCCTCTTTGGTTGGAGAGGATGAAACACTGTAGAAACCTCTTCCTAACAAACGTGTTTTAAATC

mRNA sequence

TTGGATTTTGTCCTTTCCATTGAAAGAAACCCAATTTTGGCAAGAACACTACCAAATCTGCGAACGGTTCGAGTCACAGAGGCAATCCGAGGATTCGCAGCAGCCGTCGCTACTTCCCACAGATCGCCAGGGCAGTTGTAGAGACCTGAAGTCCGGATTGCGAAGTAGAGGCAAATGGCGTCCATGGAAGTCGACAGCGCTAACTCCAATGCTTCTGACCCTGATAATCCTAGATTTTCCGTCAACGTATTGCAGCTCTTGAAATCTGCTCAGATGCAGCATGGATTGCGTCATGGAGATTATACTCGCTATCGGTTGGTGCAAACGCGTTTTGTATAAATCTGACTTTATTGTTTCATACTTCCAATTATGCTAGCGTTTATAGCGTTCTGGAGTTCTCTTGATTGCGTAGGCTGCTGATTGTTGGTAGATTTATTATTATTATTTTTGATGCGTAGGAGGTATTGCACAGCTCGGCTAAGGAGGCTGTATAAATCTCTGAAGTTCACTCATGGTCGTGGAAAGTACACCAAACGAGCCATAACTCAGTCAACTGTTAGTGAAGTCAGGTTTCTCCATGTGGTTCTTTATATGGCGGAGAGAGCATGGAGTCATGCTATGGAGAAAAGGCAATTACCAGCGGGTCCAAATGCACGCCAGCGTATCTATTTGATTGGTAGGCTCAGGAAGGCGGTAAAATGGGCCACTCTCTTTGCACAATTGTGTGCAAGCAAGGGAGATTCAAGAACGTCTTTGGAAGCAGAGGCTTATGCATCGTATATGACTGGGAACTTGTTGTTTGAACAAGATCAGAATTGGGACACTGCATTACTGAACTTCAAAAGAGCTAGAGCGGTTTATGAAGAACTTGGGAAAGTAGGAGACCTAGAGAATCAAGTTTTGTGTCGTGAACGTGTAGAGGAGCTAGAACCTAGTATACGATACTGCTTGCACAAGATAGGGAAGTCAGATCTACAGGCTTCTGAACTTTTACATATTGGGGAGATGGAAGGTCCTGCTCTAGACCTGTTCAAAGCTAAATTAGAGGCCGTCATGTCGGAGGCCAGATCTCAGCAGGCTGTTTCCATGACCGAGTTTCACTGGCTTGGTCATAGGTTTCCAATATCCAATGCAAAAACCAGAGTTGCCATATTAAAAGCTCGGGAATTAGAAAAGGACTTGCAAGGTTCAGCAGATTCACTTCCTGCAGAGAAAAGATTGTCCATTTTTGATAAGATCTTTGCAGCCTACCATGAGGCAAGGAGCTCCATTCGCAGTGATTTGGTCAGTGCTGGAAATGCTGAAAATGTTAAAGATGATTTAAGTGGGCTTGATAAAGCTGTTAGTGCAGTGTTGGGTCAAAGGACAATAGAACGCAACCAGTTATTGGTAAAAATTGCAAAAAGTAAGCTTGTTAGGCGTCATGATGAAAAAAATGAGAAAGTTACCAAGCCGGAGGAACTTGTTCGCTTGTATGATCTCTTATTACAAAATATTGCTGATCTTTCTGATTTAGTCAGTTCTGGAAGAGATAGGAGGCAGGAAGAAGTAGCGTTTGCTGAGGAGTGCTCGCTTAAAAGCATAGCTTTCCGTGGAGAAAGGTGCTTTTACTTGGCAAAATCATACAGTTTGGCTGGAAAAAGAGCCGAAGCTTATGTACTTTATTGCCATGCTCGCTCCCTTGTTGAAGATGCCATACAAAAATTCCGTACAGAAAATATCAGCGATCCGAAGATAATCGAAGAGTTGAAAACATTGATCGAGGAATGCAGAGCCAACAGTTGTATAGAGCATGCAACTGGAATTATTGAGGAGGTGAAGGCTCCAGAGAATCTGTCGAAGAAGATCTCTAACATATCATTGACTGGAGCAGAGAAGAAGTCGGTCAAATACCTCCTTCAGAGCCTCGATAACTATGAGTCTGCAGTTGGCGATTCGAACATCAAGACTGCTCCATGCATTGAAGCCTTTCCCCCCGCGTTTCGGGCAATCCCTCGGAATCCCATTGTTCTGGACCTTGCTTTTAACTACATTGACTTCCCATCTCTTGAGAATAGAATGAAAAAGGACAGAAAGGGCTTTATCAGTAGGCTATGGGGATGAGTTTTCCTTTGCCAAGATTTTGTTTTCACTTACGGTCTCTTAAACAACTTCCCAGCCCTCATTGCATGAATTTTGGGTCACAATGAGAAAGGAATGACTGTTTGTTTCTTGTGTTTCTCTCAGATGAACAACAAAGATATAGGACCAATTTTCCAGGACTTTTTTTTTTTTTGGAGGGCTGCGTGTGACTGTTGCAGAATACACATTATTTATCTTCTGATTTTGGCTATTAACTTTGAATTTATTGTGGATATTTTAGAAGTTTATTTGTAGATTGTCACAAAATAACTATTTAACACACCTTATGGATGATTGTATTGATTTGGCCTATGTTGTTAAGCTACAATTAGAGACCTAGGTTTTACGAGATCCCTCTTTGGTTGGAGAGGATGAAACACTGTAGAAACCTCTTCCTAACAAACGTGTTTTAAATC

Coding sequence (CDS)

ATGCGTAGGAGGTATTGCACAGCTCGGCTAAGGAGGCTGTATAAATCTCTGAAGTTCACTCATGGTCGTGGAAAGTACACCAAACGAGCCATAACTCAGTCAACTGTTAGTGAAGTCAGGTTTCTCCATGTGGTTCTTTATATGGCGGAGAGAGCATGGAGTCATGCTATGGAGAAAAGGCAATTACCAGCGGGTCCAAATGCACGCCAGCGTATCTATTTGATTGGTAGGCTCAGGAAGGCGGTAAAATGGGCCACTCTCTTTGCACAATTGTGTGCAAGCAAGGGAGATTCAAGAACGTCTTTGGAAGCAGAGGCTTATGCATCGTATATGACTGGGAACTTGTTGTTTGAACAAGATCAGAATTGGGACACTGCATTACTGAACTTCAAAAGAGCTAGAGCGGTTTATGAAGAACTTGGGAAAGTAGGAGACCTAGAGAATCAAGTTTTGTGTCGTGAACGTGTAGAGGAGCTAGAACCTAGTATACGATACTGCTTGCACAAGATAGGGAAGTCAGATCTACAGGCTTCTGAACTTTTACATATTGGGGAGATGGAAGGTCCTGCTCTAGACCTGTTCAAAGCTAAATTAGAGGCCGTCATGTCGGAGGCCAGATCTCAGCAGGCTGTTTCCATGACCGAGTTTCACTGGCTTGGTCATAGGTTTCCAATATCCAATGCAAAAACCAGAGTTGCCATATTAAAAGCTCGGGAATTAGAAAAGGACTTGCAAGGTTCAGCAGATTCACTTCCTGCAGAGAAAAGATTGTCCATTTTTGATAAGATCTTTGCAGCCTACCATGAGGCAAGGAGCTCCATTCGCAGTGATTTGGTCAGTGCTGGAAATGCTGAAAATGTTAAAGATGATTTAAGTGGGCTTGATAAAGCTGTTAGTGCAGTGTTGGGTCAAAGGACAATAGAACGCAACCAGTTATTGGTAAAAATTGCAAAAAGTAAGCTTGTTAGGCGTCATGATGAAAAAAATGAGAAAGTTACCAAGCCGGAGGAACTTGTTCGCTTGTATGATCTCTTATTACAAAATATTGCTGATCTTTCTGATTTAGTCAGTTCTGGAAGAGATAGGAGGCAGGAAGAAGTAGCGTTTGCTGAGGAGTGCTCGCTTAAAAGCATAGCTTTCCGTGGAGAAAGGTGCTTTTACTTGGCAAAATCATACAGTTTGGCTGGAAAAAGAGCCGAAGCTTATGTACTTTATTGCCATGCTCGCTCCCTTGTTGAAGATGCCATACAAAAATTCCGTACAGAAAATATCAGCGATCCGAAGATAATCGAAGAGTTGAAAACATTGATCGAGGAATGCAGAGCCAACAGTTGTATAGAGCATGCAACTGGAATTATTGAGGAGGTGAAGGCTCCAGAGAATCTGTCGAAGAAGATCTCTAACATATCATTGACTGGAGCAGAGAAGAAGTCGGTCAAATACCTCCTTCAGAGCCTCGATAACTATGAGTCTGCAGTTGGCGATTCGAACATCAAGACTGCTCCATGCATTGAAGCCTTTCCCCCCGCGTTTCGGGCAATCCCTCGGAATCCCATTGTTCTGGACCTTGCTTTTAACTACATTGACTTCCCATCTCTTGAGAATAGAATGAAAAAGGACAGAAAGGGCTTTATCAGTAGGCTATGGGGATGA

Protein sequence

MRRRYCTARLRRLYKSLKFTHGRGKYTKRAITQSTVSEVRFLHVVLYMAERAWSHAMEKRQLPAGPNARQRIYLIGRLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDQNWDTALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSDLQASELLHIGEMEGPALDLFKAKLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVAILKARELEKDLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRRQEEVAFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAYVLYCHARSLVEDAIQKFRTENISDPKIIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNISLTGAEKKSVKYLLQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPRNPIVLDLAFNYIDFPSLENRMKKDRKGFISRLWG

Homology

[Close]

BLAST of Carg17862 vs. NCBI nr
Match: KAG7023831.1 (Signal recognition particle subunit SRP68 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1067.4 bits (2759), Expect = 4.2e-308
Identity = 550/550 (100.00%), Postives = 550/550 (100.00%), Query Frame = 0


Query: 1   MRRRYCTARLRRLYKSLKFTHGRGKYTKRAITQSTVSEVRFLHVVLYMAERAWSHAMEKR 60
           MRRRYCTARLRRLYKSLKFTHGRGKYTKRAITQSTVSEVRFLHVVLYMAERAWSHAMEKR
Sbjct: 1   MRRRYCTARLRRLYKSLKFTHGRGKYTKRAITQSTVSEVRFLHVVLYMAERAWSHAMEKR 60

Query: 61  QLPAGPNARQRIYLIGRLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQD 120
           QLPAGPNARQRIYLIGRLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQD
Sbjct: 61  QLPAGPNARQRIYLIGRLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQD 120

Query: 121 QNWDTALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSDLQASEL 180
           QNWDTALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSDLQASEL
Sbjct: 121 QNWDTALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSDLQASEL 180

Query: 181 LHIGEMEGPALDLFKAKLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVAILKAREL 240
           LHIGEMEGPALDLFKAKLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVAILKAREL
Sbjct: 181 LHIGEMEGPALDLFKAKLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVAILKAREL 240

Query: 241 EKDLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSA 300
           EKDLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSA
Sbjct: 241 EKDLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSA 300

Query: 301 VLGQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGR 360
           VLGQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGR
Sbjct: 301 VLGQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGR 360

Query: 361 DRRQEEVAFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAYVLYCHARSLVEDAIQKFR 420
           DRRQEEVAFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAYVLYCHARSLVEDAIQKFR
Sbjct: 361 DRRQEEVAFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAYVLYCHARSLVEDAIQKFR 420

Query: 421 TENISDPKIIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNISLTGAEKKSVK 480
           TENISDPKIIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNISLTGAEKKSVK
Sbjct: 421 TENISDPKIIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNISLTGAEKKSVK 480

Query: 481 YLLQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPRNPIVLDLAFNYIDFPSLENRMKKD 540
           YLLQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPRNPIVLDLAFNYIDFPSLENRMKKD
Sbjct: 481 YLLQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPRNPIVLDLAFNYIDFPSLENRMKKD 540

Query: 541 RKGFISRLWG 551
           RKGFISRLWG
Sbjct: 541 RKGFISRLWG 550

[Close]

BLAST of Carg17862 vs. NCBI nr
Match: XP_023516487.1 (signal recognition particle subunit SRP68-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1064.3 bits (2751), Expect = 3.5e-307
Identity = 548/548 (100.00%), Postives = 548/548 (100.00%), Query Frame = 0


Query: 3   RRYCTARLRRLYKSLKFTHGRGKYTKRAITQSTVSEVRFLHVVLYMAERAWSHAMEKRQL 62
           RRYCTARLRRLYKSLKFTHGRGKYTKRAITQSTVSEVRFLHVVLYMAERAWSHAMEKRQL
Sbjct: 47  RRYCTARLRRLYKSLKFTHGRGKYTKRAITQSTVSEVRFLHVVLYMAERAWSHAMEKRQL 106

Query: 63  PAGPNARQRIYLIGRLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDQN 122
           PAGPNARQRIYLIGRLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDQN
Sbjct: 107 PAGPNARQRIYLIGRLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDQN 166

Query: 123 WDTALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSDLQASELLH 182
           WDTALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSDLQASELLH
Sbjct: 167 WDTALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSDLQASELLH 226

Query: 183 IGEMEGPALDLFKAKLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVAILKARELEK 242
           IGEMEGPALDLFKAKLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVAILKARELEK
Sbjct: 227 IGEMEGPALDLFKAKLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVAILKARELEK 286

Query: 243 DLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVL 302
           DLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVL
Sbjct: 287 DLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVL 346

Query: 303 GQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDR 362
           GQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDR
Sbjct: 347 GQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDR 406

Query: 363 RQEEVAFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAYVLYCHARSLVEDAIQKFRTE 422
           RQEEVAFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAYVLYCHARSLVEDAIQKFRTE
Sbjct: 407 RQEEVAFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAYVLYCHARSLVEDAIQKFRTE 466

Query: 423 NISDPKIIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNISLTGAEKKSVKYL 482
           NISDPKIIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNISLTGAEKKSVKYL
Sbjct: 467 NISDPKIIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNISLTGAEKKSVKYL 526

Query: 483 LQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPRNPIVLDLAFNYIDFPSLENRMKKDRK 542
           LQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPRNPIVLDLAFNYIDFPSLENRMKKDRK
Sbjct: 527 LQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPRNPIVLDLAFNYIDFPSLENRMKKDRK 586

Query: 543 GFISRLWG 551
           GFISRLWG
Sbjct: 587 GFISRLWG 594

[Close]

BLAST of Carg17862 vs. NCBI nr
Match: KAG6590169.1 (Signal recognition particle subunit SRP68, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1061.6 bits (2744), Expect = 2.3e-306
Identity = 546/548 (99.64%), Postives = 547/548 (99.82%), Query Frame = 0


Query: 3   RRYCTARLRRLYKSLKFTHGRGKYTKRAITQSTVSEVRFLHVVLYMAERAWSHAMEKRQL 62
           RRYCTARLRRLYKSLKFTHGRGKYTKRAITQSTVSEVRFLHVVLYMAERAWSHAMEKRQL
Sbjct: 47  RRYCTARLRRLYKSLKFTHGRGKYTKRAITQSTVSEVRFLHVVLYMAERAWSHAMEKRQL 106

Query: 63  PAGPNARQRIYLIGRLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDQN 122
           PAGPNARQRIYLIGRLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDQN
Sbjct: 107 PAGPNARQRIYLIGRLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDQN 166

Query: 123 WDTALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSDLQASELLH 182
           WDTALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSDLQASELLH
Sbjct: 167 WDTALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSDLQASELLH 226

Query: 183 IGEMEGPALDLFKAKLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVAILKARELEK 242
           IGEMEGPALDLFKAKLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVAILKARELEK
Sbjct: 227 IGEMEGPALDLFKAKLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVAILKARELEK 286

Query: 243 DLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVL 302
           DLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVL
Sbjct: 287 DLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVL 346

Query: 303 GQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDR 362
           GQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRD+
Sbjct: 347 GQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDK 406

Query: 363 RQEEVAFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAYVLYCHARSLVEDAIQKFRTE 422
           RQEEV FAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAYVLYCHARSLVEDAIQKFRTE
Sbjct: 407 RQEEVVFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAYVLYCHARSLVEDAIQKFRTE 466

Query: 423 NISDPKIIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNISLTGAEKKSVKYL 482
           NISDPKIIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNISLTGAEKKSVKYL
Sbjct: 467 NISDPKIIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNISLTGAEKKSVKYL 526

Query: 483 LQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPRNPIVLDLAFNYIDFPSLENRMKKDRK 542
           LQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPRNPIVLDLAFNYIDFPSLENRMKKDRK
Sbjct: 527 LQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPRNPIVLDLAFNYIDFPSLENRMKKDRK 586

Query: 543 GFISRLWG 551
           GFISRLWG
Sbjct: 587 GFISRLWG 594

[Close]

BLAST of Carg17862 vs. NCBI nr
Match: XP_022961122.1 (signal recognition particle subunit SRP68-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 1061.2 bits (2743), Expect = 3.0e-306
Identity = 545/548 (99.45%), Postives = 547/548 (99.82%), Query Frame = 0


Query: 3   RRYCTARLRRLYKSLKFTHGRGKYTKRAITQSTVSEVRFLHVVLYMAERAWSHAMEKRQL 62
           RRYCTARLRRLYKSLKFTHGRGKYTKRAITQSTVSEVRFLHVVLYMAERAWSHAMEKRQL
Sbjct: 47  RRYCTARLRRLYKSLKFTHGRGKYTKRAITQSTVSEVRFLHVVLYMAERAWSHAMEKRQL 106

Query: 63  PAGPNARQRIYLIGRLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDQN 122
           PAGPNARQRIYLIGRLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDQN
Sbjct: 107 PAGPNARQRIYLIGRLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDQN 166

Query: 123 WDTALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSDLQASELLH 182
           WDTALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSDLQASELLH
Sbjct: 167 WDTALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSDLQASELLH 226

Query: 183 IGEMEGPALDLFKAKLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVAILKARELEK 242
           IGEMEGPALDLFKAKLEA+MSEARSQQAVSMTEFHWLGHRFPISNAKTRVAILKARELEK
Sbjct: 227 IGEMEGPALDLFKAKLEAIMSEARSQQAVSMTEFHWLGHRFPISNAKTRVAILKARELEK 286

Query: 243 DLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVL 302
           DLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVL
Sbjct: 287 DLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVL 346

Query: 303 GQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDR 362
           GQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRD+
Sbjct: 347 GQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDK 406

Query: 363 RQEEVAFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAYVLYCHARSLVEDAIQKFRTE 422
           RQEEV FAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAYVLYCHARSLVEDAIQKFRTE
Sbjct: 407 RQEEVVFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAYVLYCHARSLVEDAIQKFRTE 466

Query: 423 NISDPKIIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNISLTGAEKKSVKYL 482
           NISDPKIIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNISLTGAEKKSVKYL
Sbjct: 467 NISDPKIIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNISLTGAEKKSVKYL 526

Query: 483 LQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPRNPIVLDLAFNYIDFPSLENRMKKDRK 542
           LQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPRNPIVLDLAFNYIDFPSLENRMKKDRK
Sbjct: 527 LQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPRNPIVLDLAFNYIDFPSLENRMKKDRK 586

Query: 543 GFISRLWG 551
           GFISRLWG
Sbjct: 587 GFISRLWG 594

[Close]

BLAST of Carg17862 vs. NCBI nr
Match: XP_022988052.1 (signal recognition particle subunit SRP68-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 1060.4 bits (2741), Expect = 5.1e-306
Identity = 546/548 (99.64%), Postives = 546/548 (99.64%), Query Frame = 0


Query: 3   RRYCTARLRRLYKSLKFTHGRGKYTKRAITQSTVSEVRFLHVVLYMAERAWSHAMEKRQL 62
           RRYCTARLRRLYKSLKFTHGRGKYTKRAITQSTVSEVRFLHVVLYMAERAWSHAMEKRQL
Sbjct: 47  RRYCTARLRRLYKSLKFTHGRGKYTKRAITQSTVSEVRFLHVVLYMAERAWSHAMEKRQL 106

Query: 63  PAGPNARQRIYLIGRLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDQN 122
           PAGPNARQRIYLIGRLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDQN
Sbjct: 107 PAGPNARQRIYLIGRLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDQN 166

Query: 123 WDTALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSDLQASELLH 182
           WD ALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSDLQASELLH
Sbjct: 167 WDIALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSDLQASELLH 226

Query: 183 IGEMEGPALDLFKAKLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVAILKARELEK 242
           IGEMEGPALDLFKAKLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVAILKARELEK
Sbjct: 227 IGEMEGPALDLFKAKLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVAILKARELEK 286

Query: 243 DLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVL 302
           DLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVL
Sbjct: 287 DLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVL 346

Query: 303 GQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDR 362
           GQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDR
Sbjct: 347 GQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDR 406

Query: 363 RQEEVAFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAYVLYCHARSLVEDAIQKFRTE 422
           RQEEVAFAEECSLKSIAFRGERCFYLAKSYSLAGKRAE YVLYCHARSLVEDAIQKFRTE
Sbjct: 407 RQEEVAFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEGYVLYCHARSLVEDAIQKFRTE 466

Query: 423 NISDPKIIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNISLTGAEKKSVKYL 482
           NISDPKIIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNISLTGAEKKSVKYL
Sbjct: 467 NISDPKIIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNISLTGAEKKSVKYL 526

Query: 483 LQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPRNPIVLDLAFNYIDFPSLENRMKKDRK 542
           LQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPRNPIVLDLAFNYIDFPSLENRMKKDRK
Sbjct: 527 LQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPRNPIVLDLAFNYIDFPSLENRMKKDRK 586

Query: 543 GFISRLWG 551
           GFISRLWG
Sbjct: 587 GFISRLWG 594

[Close]

BLAST of Carg17862 vs. ExPASy Swiss-Prot
Match: Q00004 (Signal recognition particle subunit SRP68 OS=Canis lupus familiaris OX=9615 GN=SRP68 PE=1 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 7.2e-69
Identity = 181/571 (31.70%), Postives = 305/571 (53.42%), Query Frame = 0


Query: 3   RRYCTARLRRLYKSLKFTHG-RGKYTKRAITQSTVSEVRFLHVVLYMAERAWSHAMEKRQ 62
           R YC+ R RRL K+L F  G R K+T + +T+  +++ R+L +VL  AERAWS+AM+ +Q
Sbjct: 81  RGYCSRRQRRLRKTLNFKMGNRHKFTGKKVTEDLLTDNRYLLLVLMDAERAWSYAMQLKQ 140

Query: 63  LPAGPNARQRIYLIGRLRKAVKWATLFAQLCAS-KGDSRTSLEAEAYASYMTGNLLFEQD 122
             A    R+R +L+ RLRKAVK A    +LC S + D++T LEA+AY +Y++G L FE  
Sbjct: 141 -EANTEPRKRFHLLSRLRKAVKHAEELERLCESNRVDAKTKLEAQAYTAYLSGMLRFEH- 200

Query: 123 QNWDTALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSDLQASEL 182
           Q W  A+  F + + +YE+L      E  VL  +RVEE+ P+IRYC + IG      +EL
Sbjct: 201 QEWKAAIEAFNKCKTIYEKLASAFTEEQAVLYNQRVEEISPNIRYCAYNIGDQS-AINEL 260

Query: 183 LHIGEMEGPALDLFKAKLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVAILKAREL 242
           + +    G    L   KLEA++++ R++QA +M+E  W G   P+   K R+ +L   + 
Sbjct: 261 MQMRLRSGGTEGLLAEKLEALITQTRAKQAATMSEVEWRGRTVPVKIDKVRIFLLGLADN 320

Query: 243 EKDLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRSDL--------VSAGNAENVKDDLS 302
           E  +   A+S   ++RL  F+ + +   +A  ++R +L         +         +L 
Sbjct: 321 EAAI-AQAESEETKERL--FESMLSECRDAIQAVREELKPDQKQRDYTLDGESGKVSNLQ 380

Query: 303 GLDKAVSAVLGQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADL 362
            L   ++ +     I RN+ + K  +  L ++ ++++++  +P++L+RLYD++LQN+ +L
Sbjct: 381 YLHSYLTYIKLSTAIRRNENMAKGLQKALQQQPEDESKRSPRPQDLIRLYDIILQNLVEL 440

Query: 363 SDLVSSGRDRRQEEVAFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAYVLYCHARSLV 422
             L     DR     AF +E  LK++ F+  RCF++A+SY L  K +EA VLY       
Sbjct: 441 LQLPGLEEDR-----AFQKEIGLKTLVFKAYRCFFIAQSYVLVKKWSEALVLY------- 500

Query: 423 EDAIQKFRTENISDP-------KIIEELKTLIEECRANSCIEHATGIIE--EVKAPENLS 482
            D + K+  E  SD        K + +++ LI + R+  C   A  I++  +   PE   
Sbjct: 501 -DRVLKYANEVNSDAGAFRNSLKDLPDVQELITQVRSEKCSLQAAAILDASDSHQPE--- 560

Query: 483 KKISNISLTGAEKKSVKYLLQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPRNPIVLDL 542
                   T ++ K  K L++  + +   +  S +     +  FPP F+ IP  P+  DL
Sbjct: 561 --------TSSQVKDNKPLVERFETF--CLDPSLVTKQANLVHFPPGFQPIPCKPLFFDL 619

Query: 543 AFNYIDFPSLENRMKKDRK----GFISRLWG 551
           A N++ FP LE+++++  K    G+I  ++G
Sbjct: 621 ALNHVAFPPLEDKLEQKTKSGLTGYIKGIFG 619

[Close]

BLAST of Carg17862 vs. ExPASy Swiss-Prot
Match: Q9UHB9 (Signal recognition particle subunit SRP68 OS=Homo sapiens OX=9606 GN=SRP68 PE=1 SV=2)

HSP 1 Score: 258.1 bits (658), Expect = 2.3e-67
Identity = 182/572 (31.82%), Postives = 307/572 (53.67%), Query Frame = 0


Query: 3   RRYCTARLRRLYKSLKFTHG-RGKYTKRAITQSTVSEVRFLHVVLYMAERAWSHAMEKRQ 62
           R YC+ R RRL K+L F  G R K+T + +T+  +++ R+L +VL  AERAWS+AM+ +Q
Sbjct: 84  RGYCSRRQRRLRKTLNFKMGNRHKFTGKKVTEELLTDNRYLLLVLMDAERAWSYAMQLKQ 143

Query: 63  LPAGPNARQRIYLIGRLRKAVKWATLFAQLCAS-KGDSRTSLEAEAYASYMTGNLLFEQD 122
             A    R+R +L+ RLRKAVK A    +LC S + D++T LEA+AY +Y++G L FE  
Sbjct: 144 -EANTEPRKRFHLLSRLRKAVKHAEELERLCESNRVDAKTKLEAQAYTAYLSGMLRFEH- 203

Query: 123 QNWDTALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSDLQASEL 182
           Q W  A+  F + + +YE+L      E  VL  +RVEE+ P+IRYC + IG      +EL
Sbjct: 204 QEWKAAIEAFNKCKTIYEKLASAFTEEQAVLYNQRVEEISPNIRYCAYNIGDQS-AINEL 263

Query: 183 LHIGEMEGPALDLFKAKLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVAILKAREL 242
           + +    G    L   KLEA++++ R++QA +M+E  W G   P+   K R+ +L   + 
Sbjct: 264 MQMRLRSGGTEGLLAEKLEALITQTRAKQAATMSEVEWRGRTVPVKIDKVRIFLLGLADN 323

Query: 243 EKDLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRSDL---------VSAGNAENVKDDL 302
           E  +   A+S   ++RL  F+ + +   +A   +R +L         +  G    V  +L
Sbjct: 324 EAAIV-QAESEETKERL--FESMLSECRDAIQVVREELKPDQKQRDYILEGEPGKV-SNL 383

Query: 303 SGLDKAVSAVLGQRTIERNQLLVK-IAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIA 362
             L   ++ +     I+RN+ + K + ++ L ++ ++ +++  +P++L+RLYD++LQN+ 
Sbjct: 384 QYLHSYLTYIKLSTAIKRNENMAKGLQRALLQQQPEDDSKRSPRPQDLIRLYDIILQNLV 443

Query: 363 DLSDLVSSGRDRRQEEVAFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAYVLYCHARS 422
           +L  L        +E+ AF +E  LK++ F+  RCF++A+SY L  K +EA VLY     
Sbjct: 444 ELLQLPG-----LEEDKAFQKEIGLKTLVFKAYRCFFIAQSYVLVKKWSEALVLY----- 503

Query: 423 LVEDAIQKFRTENISDP-------KIIEELKTLIEECRANSCIEHATGIIEEVKAPENLS 482
              D + K+  E  SD        K + +++ LI + R+  C   A  I++   A +   
Sbjct: 504 ---DRVLKYANEVNSDAGAFKNSLKDLPDVQELITQVRSEKCSLQAAAILDANDAHQ--- 563

Query: 483 KKISNISLTGAEKKSVKYLLQSLDNYESAVGDSNIKTAPC-IEAFPPAFRAIPRNPIVLD 542
                   T      VK     ++ +E+   D ++ T    +  FPP F+ IP  P+  D
Sbjct: 564 --------TETSSSQVKDNKPLVERFETFCLDPSLVTKQANLVHFPPGFQPIPCKPLFFD 623

Query: 543 LAFNYIDFPSLENRMKKDRK----GFISRLWG 551
           LA N++ FP LE+++++  K    G+I  ++G
Sbjct: 624 LALNHVAFPPLEDKLEQKTKSGLTGYIKGIFG 624

[Close]

BLAST of Carg17862 vs. ExPASy Swiss-Prot
Match: Q8BMA6 (Signal recognition particle subunit SRP68 OS=Mus musculus OX=10090 GN=Srp68 PE=1 SV=2)

HSP 1 Score: 258.1 bits (658), Expect = 2.3e-67
Identity = 180/564 (31.91%), Postives = 306/564 (54.26%), Query Frame = 0


Query: 3   RRYCTARLRRLYKSLKFTHG-RGKYTKRAITQSTVSEVRFLHVVLYMAERAWSHAMEKRQ 62
           R YC+ R RRL K+L F  G R K+T + +T+  +++ R+L +VL  AERAWS+AM+ +Q
Sbjct: 83  RGYCSRRQRRLRKTLNFKMGNRHKFTGKKVTEELLTDNRYLLLVLMDAERAWSYAMQLKQ 142

Query: 63  LPAGPNARQRIYLIGRLRKAVKWATLFAQLCAS-KGDSRTSLEAEAYASYMTGNLLFEQD 122
             A    R+R +L+ RLRKAVK A    +LC S + D++T LEA+AY +Y++G L FE  
Sbjct: 143 -EANTEPRKRFHLLSRLRKAVKHAEELERLCESNRVDAKTKLEAQAYTAYLSGMLRFEH- 202

Query: 123 QNWDTALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSDLQASEL 182
           Q W +A+  F + + +YE+L      E  VL  +RVEE+ P+IRYC + IG      +EL
Sbjct: 203 QEWKSAIEAFNKCKTIYEKLASAFTEEQAVLYNQRVEEISPNIRYCAYNIGDQS-AINEL 262

Query: 183 LHIGEMEGPALDLFKAKLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVAILKAREL 242
           + +    G    L   KLEA++++ R++QA +M+E  W G   P+   K R+ +L   + 
Sbjct: 263 MQMRLRSGGTEGLLAEKLEALITQTRAKQAATMSEVEWRGRTVPVKIDKVRIFLLGLADN 322

Query: 243 EKDLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVS-------AGNAENVK-DDLS 302
           E  +   A+S   ++RL  F+ + +   +A  ++R +L         A + E+ K  +L 
Sbjct: 323 EAAIV-QAESEETKERL--FESMLSECRDALQAVREELKPDQKQRDYALDGESGKVSNLQ 382

Query: 303 GLDKAVSAVLGQRTIERNQLLVK-IAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIAD 362
            L   ++ +     I RN+ + K + ++ L ++ ++ +++  +P++L+RLYD++LQN+ +
Sbjct: 383 YLHSYLTYIKLSTAIRRNENMAKGLHRALLQQQPEDDSKRSPRPQDLIRLYDIILQNLVE 442

Query: 363 LSDLVSSGRDRRQEEVAFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAYVLYCHARSL 422
           L  L     DR      F +E SLK++ F+  RCF++A+SY L  K +EA VLY      
Sbjct: 443 LLQLPGLEEDR-----TFQKEISLKTLVFKAYRCFFIAQSYVLVKKWSEALVLYDRVLKY 502

Query: 423 VEDAIQKFRTENISDPKIIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNISL 482
             + +      + +  K + +++ LI + R+  C   A  I++            +N S 
Sbjct: 503 ANE-VSSHGGASKNSLKDLPDVQELITQVRSEKCSLQAAAILD------------ANDSH 562

Query: 483 TGAEKKSVKYLLQSLDNYESAVGDSNIKTAPC-IEAFPPAFRAIPRNPIVLDLAFNYIDF 542
                  VK     ++ +ES   D ++ T    +  FPP F+ IP  P+  DLA N++ F
Sbjct: 563 QTDTSSQVKDNTPLVERFESFCLDPSLVTKQANLVHFPPGFQPIPCKPLFFDLALNHVAF 622

Query: 543 PSLENRMKKDRK----GFISRLWG 551
           P LE+++++  K    G+I  ++G
Sbjct: 623 PPLEDKLEQKTKSGLTGYIKGIFG 622

[Close]

BLAST of Carg17862 vs. ExPASy Swiss-Prot
Match: Q9VSS2 (Signal recognition particle subunit SRP68 OS=Drosophila melanogaster OX=7227 GN=Srp68 PE=2 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.5e-53
Identity = 162/562 (28.83%), Postives = 287/562 (51.07%), Query Frame = 0


Query: 3   RRYCTARLRRLYKSLKFTHGRGKYTKR---AITQST--VSEVRFLHVVLYMAERAWSHAM 62
           R YC+ R+RRL K+LK+  G  ++ KR    I Q T   ++ RF+H+ L  AERAW++AM
Sbjct: 55  RGYCSRRIRRLRKALKYPQGDKRHFKRRDVTIGQLTGKKADERFIHIPLICAERAWAYAM 114

Query: 63  EKRQLPAGPNARQRIYLIGRLRKAVKWATLFAQLCASKG-DSRTSLEAEAYASYMTGNLL 122
           + +Q  +    R+R +L+ +LR+A  +A    +LC ++  D+RT LE EAY ++M G L 
Sbjct: 115 QLKQ-ESNTEPRKRFHLVNKLRRACFYALQLQELCNTEAFDARTKLECEAYVAWMHGTLH 174

Query: 123 FEQDQNWDTALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKI--GKSD 182
           FE  Q W TA  + KRA+ VYE LGK    + Q L R +V E  P++RYC + I  G S 
Sbjct: 175 FEL-QLWKTAGEHLKRAQVVYENLGKALPEDEQELYRAKVNEFTPNLRYCAYNISGGASG 234

Query: 183 LQASELLHI---GEMEGPALDLFKAKLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTR 242
            +  E+L +   G +E          L+ ++S+ +++ +  +    W G +  +   K R
Sbjct: 235 GKIDEILELRAQGVLE---------NLDVLVSQTKTESSEGLQTIDWRGRKVTVRPEKVR 294

Query: 243 VAILKARELEKDLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAENVK--D 302
           + +L A+EL+K L   A +   + ++ + ++I     +A  ++R ++       ++    
Sbjct: 295 LFLLSAQELDKSL---AKTTKQDAKIELIERILMDCKDAIQAVRDEIKQDPKLRSLTTGQ 354

Query: 303 DLSGLD---KAVSAVLGQRTIERNQLLVKIAK-----SKLVRRHDEKNEKVTKPEELVRL 362
            +SG+      +S +   RT++RN  LV+ AK       L  + +  + K  +P++L RL
Sbjct: 355 TVSGVQYLLAYLSYIRHSRTLQRNLCLVEQAKLNFYDPNLQSQQNVGDGKRVRPQDLARL 414

Query: 363 YDLLLQNIADLSDLVSSGRDRRQEEVAFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEA 422
           Y+++LQN+ ++  +     +  +++  +  E    +I F+  RC+Y+A +     K  EA
Sbjct: 415 YEIILQNVTEMQQI-----NGLEDDATYQSEVENLAITFKAFRCYYIALTLIDIKKWKEA 474

Query: 423 YVLYCHARSLVEDAIQKFRTENISDPKIIEELKTLIEECRANSCIEHATGIIEEVKAPEN 482
             LY  A +   +A+   + ++  + ++ EELK ++          HA  ++E+  + E+
Sbjct: 475 VALYERASNYATEAL---KGKSSPEFQLQEELKKVVSAIDGCKFSAHAYSVLEDDNSEES 534

Query: 483 LSKKISNISLTGAEKKSVKYLLQSLDNYESAVGDSNIKT-APCIEAFPPAFRAIPRNPIV 542
                     T   +K+ K L + L  Y+    D ++ T AP +    P    IP  PI 
Sbjct: 535 --------GTTTKSQKTTKPLYERLSLYKE---DQSLHTKAPNVFKLTPDMEPIPCKPIF 583

[Close]

BLAST of Carg17862 vs. ExPASy Swiss-Prot
Match: Q20822 (Probable signal recognition particle subunit SRP68 OS=Caenorhabditis elegans OX=6239 GN=srpa-68 PE=3 SV=2)

HSP 1 Score: 166.8 bits (421), Expect = 7.0e-40
Identity = 141/559 (25.22%), Postives = 272/559 (48.66%), Query Frame = 0


Query: 3   RRYCTARLRRLYKSLKFTHG-------RGKYTKRAITQSTVSEVRFLHVVLYMAERAWSH 62
           R+YC A+L R+ K+LKFT+        + K+ K+ ++  +V  V+FL+  ++ +ER ++ 
Sbjct: 44  RKYCAAKLERMRKALKFTNSHNCQKKRKAKFVKKWLSVESVQNVQFLNFGIFESERRYAE 103

Query: 63  AM-EKRQLPAGP-NARQRIYLIGRLRKAVKWATLFAQLC--ASKGDSRTSLEAEAYASYM 122
           AM +K  L   P  +R++  +I  LRKAV  AT   ++   + + D+ T LEA+AYA++M
Sbjct: 104 AMIDKITLEDNPEKSRKKFSMINSLRKAVLHATNLEKIVQESERFDAPTKLEAQAYAAWM 163

Query: 123 TGNLLFEQDQNWDTALLNFKRARAVYEELGK-VGDLENQVLCRERVEELEPSIRYCLHKI 182
            G   FE  +NW  A  + K A+ VYE+L +   +     + + R  E++P +R C   I
Sbjct: 164 RGMCSFE-SRNWQKASESLKLAKTVYEKLAEATNNTTLSSIFKGRCREIQPQLRLCEFNI 223

Query: 183 GKSDLQASELLHIGEMEGPALDLFKAKLEAVMSEAR-SQQAVSMTEFHWLGHRFPISNAK 242
            +S      +  + E+     +   + ++ ++SE R S  +  +    W G +  + + K
Sbjct: 224 AESPGAVGTMTELMELRMQMGEGGDSSVDKLISEMRASATSAEVVTIEWGGAKSTVDDEK 283

Query: 243 TRVAILKARELEKDLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAENVKD 302
            +  + + ++ E +L   A     ++++++F+K  A   +A   I SD++   ++EN   
Sbjct: 284 AKQVVQEWKQTEVEL---AQCQTPKEKMALFEKATADTRDAIDRI-SDIIRRKSSENADT 343

Query: 303 DLSGLDKAVSAVLGQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNI 362
            +    KA    L         L +           + K+EK +KP++L+RLYD +++  
Sbjct: 344 TVLQSIKAYLEFLKMNGTASRYLAI---------IDNTKSEKKSKPQDLLRLYDSVIEIY 403

Query: 363 ADLSDLVSSGRDRRQEEVAFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAYVLYCHAR 422
            +++++  +  D+        +   +K   +R  RCFY+A SYS   K +EA  L+    
Sbjct: 404 KEVAEIPGADHDKN-----LIQAFEVKVEYYRAFRCFYMASSYSALHKYSEAAALFDRTV 463

Query: 423 SLVEDA---IQKFRTENI---SDPKIIEELKTLIEECRANSCIEHATGIIEEVKAPENLS 482
           S V+DA   ++K ++ +         + EL++ +E  +             +VK    L+
Sbjct: 464 SRVQDAEGKLKKLKSSSFITNETQSSLNELRSEVESAKVTVRAARLASAAGDVKTDSELA 523

Query: 483 KKISNISLTGAEKKSVKYLLQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPRNPIVLDL 542
           K I        +K+ +   +     ++      + KT P + + PPAF  +P  PI  DL
Sbjct: 524 KII--------DKRPLLETVNEWRQWDVRNSLKDKKTIP-VASLPPAFIPMPNKPIFFDL 574

[Close]

BLAST of Carg17862 vs. ExPASy TrEMBL
Match: A0A6J1H9B0 (Signal recognition particle subunit SRP68 OS=Cucurbita moschata OX=3662 GN=LOC111461728 PE=3 SV=1)

HSP 1 Score: 1061.2 bits (2743), Expect = 1.4e-306
Identity = 545/548 (99.45%), Postives = 547/548 (99.82%), Query Frame = 0


Query: 3   RRYCTARLRRLYKSLKFTHGRGKYTKRAITQSTVSEVRFLHVVLYMAERAWSHAMEKRQL 62
           RRYCTARLRRLYKSLKFTHGRGKYTKRAITQSTVSEVRFLHVVLYMAERAWSHAMEKRQL
Sbjct: 47  RRYCTARLRRLYKSLKFTHGRGKYTKRAITQSTVSEVRFLHVVLYMAERAWSHAMEKRQL 106

Query: 63  PAGPNARQRIYLIGRLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDQN 122
           PAGPNARQRIYLIGRLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDQN
Sbjct: 107 PAGPNARQRIYLIGRLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDQN 166

Query: 123 WDTALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSDLQASELLH 182
           WDTALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSDLQASELLH
Sbjct: 167 WDTALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSDLQASELLH 226

Query: 183 IGEMEGPALDLFKAKLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVAILKARELEK 242
           IGEMEGPALDLFKAKLEA+MSEARSQQAVSMTEFHWLGHRFPISNAKTRVAILKARELEK
Sbjct: 227 IGEMEGPALDLFKAKLEAIMSEARSQQAVSMTEFHWLGHRFPISNAKTRVAILKARELEK 286

Query: 243 DLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVL 302
           DLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVL
Sbjct: 287 DLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVL 346

Query: 303 GQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDR 362
           GQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRD+
Sbjct: 347 GQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDK 406

Query: 363 RQEEVAFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAYVLYCHARSLVEDAIQKFRTE 422
           RQEEV FAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAYVLYCHARSLVEDAIQKFRTE
Sbjct: 407 RQEEVVFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAYVLYCHARSLVEDAIQKFRTE 466

Query: 423 NISDPKIIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNISLTGAEKKSVKYL 482
           NISDPKIIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNISLTGAEKKSVKYL
Sbjct: 467 NISDPKIIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNISLTGAEKKSVKYL 526

Query: 483 LQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPRNPIVLDLAFNYIDFPSLENRMKKDRK 542
           LQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPRNPIVLDLAFNYIDFPSLENRMKKDRK
Sbjct: 527 LQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPRNPIVLDLAFNYIDFPSLENRMKKDRK 586

Query: 543 GFISRLWG 551
           GFISRLWG
Sbjct: 587 GFISRLWG 594

[Close]

BLAST of Carg17862 vs. ExPASy TrEMBL
Match: A0A6J1JC09 (Signal recognition particle subunit SRP68 OS=Cucurbita maxima OX=3661 GN=LOC111485409 PE=3 SV=1)

HSP 1 Score: 1060.4 bits (2741), Expect = 2.5e-306
Identity = 546/548 (99.64%), Postives = 546/548 (99.64%), Query Frame = 0


Query: 3   RRYCTARLRRLYKSLKFTHGRGKYTKRAITQSTVSEVRFLHVVLYMAERAWSHAMEKRQL 62
           RRYCTARLRRLYKSLKFTHGRGKYTKRAITQSTVSEVRFLHVVLYMAERAWSHAMEKRQL
Sbjct: 47  RRYCTARLRRLYKSLKFTHGRGKYTKRAITQSTVSEVRFLHVVLYMAERAWSHAMEKRQL 106

Query: 63  PAGPNARQRIYLIGRLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDQN 122
           PAGPNARQRIYLIGRLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDQN
Sbjct: 107 PAGPNARQRIYLIGRLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDQN 166

Query: 123 WDTALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSDLQASELLH 182
           WD ALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSDLQASELLH
Sbjct: 167 WDIALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSDLQASELLH 226

Query: 183 IGEMEGPALDLFKAKLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVAILKARELEK 242
           IGEMEGPALDLFKAKLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVAILKARELEK
Sbjct: 227 IGEMEGPALDLFKAKLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVAILKARELEK 286

Query: 243 DLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVL 302
           DLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVL
Sbjct: 287 DLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVL 346

Query: 303 GQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDR 362
           GQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDR
Sbjct: 347 GQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDR 406

Query: 363 RQEEVAFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAYVLYCHARSLVEDAIQKFRTE 422
           RQEEVAFAEECSLKSIAFRGERCFYLAKSYSLAGKRAE YVLYCHARSLVEDAIQKFRTE
Sbjct: 407 RQEEVAFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEGYVLYCHARSLVEDAIQKFRTE 466

Query: 423 NISDPKIIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNISLTGAEKKSVKYL 482
           NISDPKIIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNISLTGAEKKSVKYL
Sbjct: 467 NISDPKIIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNISLTGAEKKSVKYL 526

Query: 483 LQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPRNPIVLDLAFNYIDFPSLENRMKKDRK 542
           LQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPRNPIVLDLAFNYIDFPSLENRMKKDRK
Sbjct: 527 LQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPRNPIVLDLAFNYIDFPSLENRMKKDRK 586

Query: 543 GFISRLWG 551
           GFISRLWG
Sbjct: 587 GFISRLWG 594

[Close]

BLAST of Carg17862 vs. ExPASy TrEMBL
Match: A0A6J1HAZ0 (Signal recognition particle subunit SRP68 OS=Cucurbita moschata OX=3662 GN=LOC111461728 PE=3 SV=1)

HSP 1 Score: 1054.7 bits (2726), Expect = 1.4e-304
Identity = 544/548 (99.27%), Postives = 546/548 (99.64%), Query Frame = 0


Query: 3   RRYCTARLRRLYKSLKFTHGRGKYTKRAITQSTVSEVRFLHVVLYMAERAWSHAMEKRQL 62
           RRYCTARLRRLYKSLKFTHGRGKYTKRAITQSTVSEVRFLHVVLYMAERAWSHAMEKRQL
Sbjct: 47  RRYCTARLRRLYKSLKFTHGRGKYTKRAITQSTVSEVRFLHVVLYMAERAWSHAMEKRQL 106

Query: 63  PAGPNARQRIYLIGRLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDQN 122
           PAGPNARQRIYLIGRLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDQN
Sbjct: 107 PAGPNARQRIYLIGRLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDQN 166

Query: 123 WDTALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSDLQASELLH 182
           WDTALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSDLQASELLH
Sbjct: 167 WDTALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSDLQASELLH 226

Query: 183 IGEMEGPALDLFKAKLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVAILKARELEK 242
           IGEMEGPALDLFKAKLEA+MSEARSQQAVSMTEFHWLGHRFPISNAKTRVAILKARELEK
Sbjct: 227 IGEMEGPALDLFKAKLEAIMSEARSQQAVSMTEFHWLGHRFPISNAKTRVAILKARELEK 286

Query: 243 DLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVL 302
           DLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVL
Sbjct: 287 DLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVL 346

Query: 303 GQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDR 362
           GQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRD+
Sbjct: 347 GQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDK 406

Query: 363 RQEEVAFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAYVLYCHARSLVEDAIQKFRTE 422
           RQEEV FAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAYVLYCHARSLVEDAIQKFRTE
Sbjct: 407 RQEEVVFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAYVLYCHARSLVEDAIQKFRTE 466

Query: 423 NISDPKIIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNISLTGAEKKSVKYL 482
           NISDP IIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNISLTGAEKKSVKYL
Sbjct: 467 NISDP-IIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNISLTGAEKKSVKYL 526

Query: 483 LQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPRNPIVLDLAFNYIDFPSLENRMKKDRK 542
           LQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPRNPIVLDLAFNYIDFPSLENRMKKDRK
Sbjct: 527 LQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPRNPIVLDLAFNYIDFPSLENRMKKDRK 586

Query: 543 GFISRLWG 551
           GFISRLWG
Sbjct: 587 GFISRLWG 593

[Close]

BLAST of Carg17862 vs. ExPASy TrEMBL
Match: A0A6J1JL53 (Signal recognition particle subunit SRP68 OS=Cucurbita maxima OX=3661 GN=LOC111485409 PE=3 SV=1)

HSP 1 Score: 1053.9 bits (2724), Expect = 2.3e-304
Identity = 545/548 (99.45%), Postives = 545/548 (99.45%), Query Frame = 0


Query: 3   RRYCTARLRRLYKSLKFTHGRGKYTKRAITQSTVSEVRFLHVVLYMAERAWSHAMEKRQL 62
           RRYCTARLRRLYKSLKFTHGRGKYTKRAITQSTVSEVRFLHVVLYMAERAWSHAMEKRQL
Sbjct: 47  RRYCTARLRRLYKSLKFTHGRGKYTKRAITQSTVSEVRFLHVVLYMAERAWSHAMEKRQL 106

Query: 63  PAGPNARQRIYLIGRLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDQN 122
           PAGPNARQRIYLIGRLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDQN
Sbjct: 107 PAGPNARQRIYLIGRLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDQN 166

Query: 123 WDTALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSDLQASELLH 182
           WD ALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSDLQASELLH
Sbjct: 167 WDIALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSDLQASELLH 226

Query: 183 IGEMEGPALDLFKAKLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVAILKARELEK 242
           IGEMEGPALDLFKAKLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVAILKARELEK
Sbjct: 227 IGEMEGPALDLFKAKLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVAILKARELEK 286

Query: 243 DLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVL 302
           DLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVL
Sbjct: 287 DLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVL 346

Query: 303 GQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDR 362
           GQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDR
Sbjct: 347 GQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDR 406

Query: 363 RQEEVAFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAYVLYCHARSLVEDAIQKFRTE 422
           RQEEVAFAEECSLKSIAFRGERCFYLAKSYSLAGKRAE YVLYCHARSLVEDAIQKFRTE
Sbjct: 407 RQEEVAFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEGYVLYCHARSLVEDAIQKFRTE 466

Query: 423 NISDPKIIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNISLTGAEKKSVKYL 482
           NISDP IIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNISLTGAEKKSVKYL
Sbjct: 467 NISDP-IIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNISLTGAEKKSVKYL 526

Query: 483 LQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPRNPIVLDLAFNYIDFPSLENRMKKDRK 542
           LQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPRNPIVLDLAFNYIDFPSLENRMKKDRK
Sbjct: 527 LQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPRNPIVLDLAFNYIDFPSLENRMKKDRK 586

Query: 543 GFISRLWG 551
           GFISRLWG
Sbjct: 587 GFISRLWG 593

[Close]

BLAST of Carg17862 vs. ExPASy TrEMBL
Match: A0A0A0M2X1 (Signal recognition particle subunit SRP68 OS=Cucumis sativus OX=3659 GN=Csa_1G627500 PE=3 SV=1)

HSP 1 Score: 1027.3 bits (2655), Expect = 2.3e-296
Identity = 525/548 (95.80%), Postives = 538/548 (98.18%), Query Frame = 0


Query: 3   RRYCTARLRRLYKSLKFTHGRGKYTKRAITQSTVSEVRFLHVVLYMAERAWSHAMEKRQL 62
           RRYCTARLRRLYKSLKFTHGRGKYTKRAITQSTVSEVR+LHVVLY AERAWSHAMEKRQL
Sbjct: 47  RRYCTARLRRLYKSLKFTHGRGKYTKRAITQSTVSEVRYLHVVLYTAERAWSHAMEKRQL 106

Query: 63  PAGPNARQRIYLIGRLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDQN 122
           P GPN RQRIYLIGRLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQD+N
Sbjct: 107 PDGPNPRQRIYLIGRLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDRN 166

Query: 123 WDTALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSDLQASELLH 182
           WDTALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKS+LQASELLH
Sbjct: 167 WDTALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSNLQASELLH 226

Query: 183 IGEMEGPALDLFKAKLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVAILKARELEK 242
           IGEMEGPALDLFKAKLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRV+ILKARELEK
Sbjct: 227 IGEMEGPALDLFKAKLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVSILKARELEK 286

Query: 243 DLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVL 302
           DLQ SADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAE+VKDDLSGLDKAVSAVL
Sbjct: 287 DLQSSADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAESVKDDLSGLDKAVSAVL 346

Query: 303 GQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDR 362
           GQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDR
Sbjct: 347 GQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDR 406

Query: 363 RQEEVAFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAYVLYCHARSLVEDAIQKFRTE 422
           RQEEV FAEECSLKS+AFRGERCFYLAKSYSLAGKRAEAYVLYCHARSL+EDAIQKFRT 
Sbjct: 407 RQEEVTFAEECSLKSLAFRGERCFYLAKSYSLAGKRAEAYVLYCHARSLIEDAIQKFRTA 466

Query: 423 NISDPKIIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNISLTGAEKKSVKYL 482
           NISDPK+IEELKTLIEECR NSC+EHATGIIEE KAPENLSKKISN+SLTGAEKKS KYL
Sbjct: 467 NISDPKLIEELKTLIEECRVNSCVEHATGIIEEAKAPENLSKKISNMSLTGAEKKSAKYL 526

Query: 483 LQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPRNPIVLDLAFNYIDFPSLENRMKKDRK 542
           LQSLDNYESAVGDSNIKTAP IEAFPPAF+AIPRNPIVLD+AFN+IDFPSLENRMKKDRK
Sbjct: 527 LQSLDNYESAVGDSNIKTAPRIEAFPPAFQAIPRNPIVLDIAFNFIDFPSLENRMKKDRK 586

Query: 543 GFISRLWG 551
           GFISRLWG
Sbjct: 587 GFISRLWG 594

[Close]

BLAST of Carg17862 vs. TAIR 10
Match: AT5G61970.1 (signal recognition particle-related / SRP-related )

HSP 1 Score: 829.3 bits (2141), Expect = 1.8e-240
Identity = 425/548 (77.55%), Postives = 480/548 (87.59%), Query Frame = 0


Query: 3   RRYCTARLRRLYKSLKFTHGRGKYTKRAITQSTVSEVRFLHVVLYMAERAWSHAMEKRQL 62
           RRYC+ARLRRLYKSLKFTHGRGKYT+RAI +STV++VRFLHVV YMAERAWSHAMEKRQL
Sbjct: 54  RRYCSARLRRLYKSLKFTHGRGKYTRRAILESTVTDVRFLHVVFYMAERAWSHAMEKRQL 113

Query: 63  PAGPNARQRIYLIGRLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDQN 122
           P GPNARQRIYL+GRLRKAVKWA+LF+ LC+ K DSRTSLEAEAYASYM G LLFEQDQN
Sbjct: 114 PDGPNARQRIYLVGRLRKAVKWASLFSSLCSIKTDSRTSLEAEAYASYMKGTLLFEQDQN 173

Query: 123 WDTALLNFKRARAVYEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSDLQASELLH 182
           W+T L  FK ARAVYEELGK GDLENQVLCRERVEELEPSIRYCLHKIGKS+LQ SELL 
Sbjct: 174 WETGLACFKNARAVYEELGKYGDLENQVLCRERVEELEPSIRYCLHKIGKSNLQTSELLQ 233

Query: 183 IGEMEGPALDLFKAKLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVAILKARELEK 242
           IGEMEGPALDLFKAK+EA M EARSQQA S+TEF WLG+RFP+SN K+RV+ILKA+ELEK
Sbjct: 234 IGEMEGPALDLFKAKIEAAMEEARSQQAASLTEFSWLGYRFPVSNPKSRVSILKAQELEK 293

Query: 243 DLQG-SADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAV 302
           +LQ  +A+SLPAEK+L+IFDK+F AYH+AR++IRSDLVSAGNAE+VKDDL+GLDKAV AV
Sbjct: 294 ELQSPTAESLPAEKKLTIFDKLFTAYHDARNTIRSDLVSAGNAESVKDDLNGLDKAVGAV 353

Query: 303 LGQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRD 362
           LGQRTIERNQLLVK+AKSKL R+ D+KN+KVT+PEELVRLYDLLLQN+ADLSDL+SSGRD
Sbjct: 354 LGQRTIERNQLLVKVAKSKLNRKRDDKNDKVTRPEELVRLYDLLLQNVADLSDLISSGRD 413

Query: 363 RRQEEVAFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAYVLYCHARSLVEDAIQKFRT 422
           R+ EE+AF EEC   S+AFR ERCFYLAKSYSLAGKRAEA+ LY  ARSL EDA+ KF++
Sbjct: 414 RKPEEIAFEEECQRTSLAFRAERCFYLAKSYSLAGKRAEAFALYSRARSLAEDALNKFQS 473

Query: 423 ENISDPKIIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNISLTG-AEKKSVK 482
               D   I+ELKTLI+ECRANSCIEHATGI+EE +APENLS ++S ISL   A +   K
Sbjct: 474 IAKKDEGTIQELKTLIKECRANSCIEHATGIMEEERAPENLSNRMSTISLNNTAAQVEEK 533

Query: 483 YLLQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPRNPIVLDLAFNYIDFPSLENRMKKD 542
           YLL  LD YESAVGDSN KTAP IE FPPA ++IPRNPIVLDLA+N IDFP +ENRMKK 
Sbjct: 534 YLLDKLDVYESAVGDSNTKTAPKIERFPPALQSIPRNPIVLDLAYNCIDFPVIENRMKKK 593

Query: 543 RKGFISRL 549
              F SR+
Sbjct: 594 GGFFSSRI 601

The following BLAST results are available for this feature:

BLAST of Carg17862 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023831.1	4.2e-308	100.00	Signal recognition particle subunit SRP68 [Cucurbita argyrosperma subsp. argyros...	[more]
XP_023516487.1	3.5e-307	100.00	signal recognition particle subunit SRP68-like isoform X1 [Cucurbita pepo subsp....	[more]
KAG6590169.1	2.3e-306	99.64	Signal recognition particle subunit SRP68, partial [Cucurbita argyrosperma subsp...	[more]
XP_022961122.1	3.0e-306	99.45	signal recognition particle subunit SRP68-like isoform X1 [Cucurbita moschata]	[more]
XP_022988052.1	5.1e-306	99.64	signal recognition particle subunit SRP68-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg17862 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q00004	7.2e-69	31.70	Signal recognition particle subunit SRP68 OS=Canis lupus familiaris OX=9615 GN=S...	[more]
Q9UHB9	2.3e-67	31.82	Signal recognition particle subunit SRP68 OS=Homo sapiens OX=9606 GN=SRP68 PE=1 ...	[more]
Q8BMA6	2.3e-67	31.91	Signal recognition particle subunit SRP68 OS=Mus musculus OX=10090 GN=Srp68 PE=1...	[more]
Q9VSS2	1.5e-53	28.83	Signal recognition particle subunit SRP68 OS=Drosophila melanogaster OX=7227 GN=...	[more]
Q20822	7.0e-40	25.22	Probable signal recognition particle subunit SRP68 OS=Caenorhabditis elegans OX=...	[more]

BLAST of Carg17862 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H9B0	1.4e-306	99.45	Signal recognition particle subunit SRP68 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1JC09	2.5e-306	99.64	Signal recognition particle subunit SRP68 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1HAZ0	1.4e-304	99.27	Signal recognition particle subunit SRP68 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1JL53	2.3e-304	99.45	Signal recognition particle subunit SRP68 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A0A0M2X1	2.3e-296	95.80	Signal recognition particle subunit SRP68 OS=Cucumis sativus OX=3659 GN=Csa_1G62...	[more]

BLAST of Carg17862 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61970.1	1.8e-240	77.55	signal recognition particle-related / SRP-related	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026258	Signal recognition particle subunit SRP68	PIRSF	PIRSF038995	SRP68	coord: 1..544 e-value: 1.8E-83 score: 279.0
IPR026258	Signal recognition particle subunit SRP68	PFAM	PF16969	SRP68	coord: 3..528 e-value: 9.5E-154 score: 513.5
IPR026258	Signal recognition particle subunit SRP68	PANTHER	PTHR12860	SIGNAL RECOGNITION PARTICLE 68 KDA PROTEIN	coord: 3..550
IPR038253	SRP68, N-terminal domain superfamily	GENE3D	1.10.3450.40		coord: 2..172 e-value: 9.1E-56 score: 191.1
IPR034652	Signal recognition particle subunit SRP68, RNA-binding domain	CDD	cd15481	SRP68-RBD	coord: 3..168 e-value: 6.60257E-47 score: 160.468

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17862-RA	Carg17862-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006614	SRP-dependent cotranslational protein targeting to membrane
cellular_component	GO:0005786	signal recognition particle, endoplasmic reticulum targeting
molecular_function	GO:0008312	7S RNA binding
molecular_function	GO:0030942	endoplasmic reticulum signal peptide binding
molecular_function	GO:0005047	signal recognition particle binding
molecular_function	GO:0003723	RNA binding