Carg17798 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAGACAGAAGAGCCCCGGCGTAAAGATCCTCTGGGTTTGGACTCTTGGCACCGCCGCCATTCTCGTTACAAGCGTAGCTCGGAGGAGGATGAGGGATATGGAGAACATGATCAACTCCGATCAACAACCATCGCTGCACCACCAACAAACGTCTTCCACCGATTCGTTTTCCGTCGATGAAGGAGACGTATCACAGGCTTAG ATGGCGAGACAGAAGAGCCCCGGCGTAAAGATCCTCTGGGTTTGGACTCTTGGCACCGCCGCCATTCTCGTTACAAGCGTAGCTCGGAGGAGGATGAGGGATATGGAGAACATGATCAACTCCGATCAACAACCATCGCTGCACCACCAACAAACGTCTTCCACCGATTCGTTTTCCGTCGATGAAGGAGACGTATCACAGGCTTAG ATGGCGAGACAGAAGAGCCCCGGCGTAAAGATCCTCTGGGTTTGGACTCTTGGCACCGCCGCCATTCTCGTTACAAGCGTAGCTCGGAGGAGGATGAGGGATATGGAGAACATGATCAACTCCGATCAACAACCATCGCTGCACCACCAACAAACGTCTTCCACCGATTCGTTTTCCGTCGATGAAGGAGACGTATCACAGGCTTAG MARQKSPGVKILWVWTLGTAAILVTSVARRRMRDMENMINSDQQPSLHHQQTSSTDSFSVDEGDVSQA Homology
BLAST of Carg17798 vs. NCBI nr
Match: XP_022987500.1 (uncharacterized protein LOC111485045 [Cucurbita maxima] >KAG7023767.1 hypothetical protein SDJN02_14793, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 133.7 bits (335), Expect = 6.2e-28 Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0
BLAST of Carg17798 vs. NCBI nr
Match: XP_023516467.1 (uncharacterized protein LOC111780326 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 132.1 bits (331), Expect = 1.8e-27 Identity = 67/68 (98.53%), Postives = 67/68 (98.53%), Query Frame = 0
BLAST of Carg17798 vs. NCBI nr
Match: XP_038878707.1 (uncharacterized protein LOC120070883 [Benincasa hispida]) HSP 1 Score: 117.5 bits (293), Expect = 4.6e-23 Identity = 61/73 (83.56%), Postives = 65/73 (89.04%), Query Frame = 0
BLAST of Carg17798 vs. NCBI nr
Match: XP_011660223.2 (uncharacterized protein LOC105436351 [Cucumis sativus] >KAE8653574.1 hypothetical protein Csa_007337 [Cucumis sativus]) HSP 1 Score: 104.0 bits (258), Expect = 5.2e-19 Identity = 53/69 (76.81%), Postives = 59/69 (85.51%), Query Frame = 0
BLAST of Carg17798 vs. NCBI nr
Match: XP_008443690.1 (PREDICTED: uncharacterized protein LOC103487223 [Cucumis melo]) HSP 1 Score: 102.1 bits (253), Expect = 2.0e-18 Identity = 56/75 (74.67%), Postives = 60/75 (80.00%), Query Frame = 0
BLAST of Carg17798 vs. ExPASy TrEMBL
Match: A0A6J1JH17 (uncharacterized protein LOC111485045 OS=Cucurbita maxima OX=3661 GN=LOC111485045 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 3.0e-28 Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0
BLAST of Carg17798 vs. ExPASy TrEMBL
Match: A0A0A0LY21 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G656450 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 2.5e-19 Identity = 53/69 (76.81%), Postives = 59/69 (85.51%), Query Frame = 0
BLAST of Carg17798 vs. ExPASy TrEMBL
Match: A0A5D3E426 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84664G00800 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 9.7e-19 Identity = 56/75 (74.67%), Postives = 60/75 (80.00%), Query Frame = 0
BLAST of Carg17798 vs. ExPASy TrEMBL
Match: A0A1S3B9D1 (uncharacterized protein LOC103487223 OS=Cucumis melo OX=3656 GN=LOC103487223 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 9.7e-19 Identity = 56/75 (74.67%), Postives = 60/75 (80.00%), Query Frame = 0
BLAST of Carg17798 vs. ExPASy TrEMBL
Match: A0A6J1EZE2 (uncharacterized protein LOC111440489 OS=Cucurbita moschata OX=3662 GN=LOC111440489 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 4.1e-17 Identity = 52/69 (75.36%), Postives = 58/69 (84.06%), Query Frame = 0
BLAST of Carg17798 vs. TAIR 10
Match: AT1G06010.1 (unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 72.0 bits (175), Expect = 2.1e-13 Identity = 35/60 (58.33%), Postives = 44/60 (73.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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