Carg17775 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg17775
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Superoxide dismutase
Location	Carg_Chr04: 17596552 .. 17603784 (-)
RNA-Seq Expression	Carg17775
Synteny	Carg17775

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTAGTATATTATTTATTACTATATCTATTCTTAACAGAATTCTTATCCTTGGCCGGGTGCATATAGCGGGAAAACAGTACTTTCTTCTTCTTACACTGAGAGTAGGCTGAACAACGGCGGCAACATTTCGCTCACCAGTAAACTTGAACTACAGCTCTGTAATTTTCCCAAAAACGTGACGAAAAACTCTTCCCAGTCCCACCCATTTTTTCTCCTCCTTCAATCTGTTCGGTTTCCAAGGAAACGCGAAGGAATAGCACCAACTCATTTTCCAGTAGGTGCAATCGACTAACCTTTTGAGATTTTTTTGGGTCAAGGGAAATGAGTTATGTTTATTTGAATAAATTGGCTTTCGGGCTTGTAGAAAATCGCATGTTCTATTTTCGTGCAATCGTTTCTTTTGTGTTCTTTTGGCTGGATGAGAGAGTGTCACTGTATTGAGAAGCTGACTCTCCATATCTGTTTGATTGGTGATGAAATGTTAAGAACAACGTTTTAATTGTCTACGTCCTGTAATGGAAGTGTTCGATTTTGAAATTGGGAAATTCTTTTGGTAGCAAGAAAACAGTGTTTGGTTTTTATTAAGCATGAAATGCACATAAGTTGTTTGAGTTAATGCCTTAATGAAACTAGACATCGTGAAATTAGTTTGGGTTGAATTTTTTTTGTTTGTCATTAATTCTTTGTGGTCTGAATTCAGTGTGTTATGTTTTTCAGACGGCTGCAGCAGCTAGTGAATATTTAGTTGCTAGAGATACAAAACAATGATTTCTTGCAACAATCCTCTGAACGTTAACTCTCAGCTTCTGCTGTGCAATTCTTCCCAGCAGTTAAAGAGCACCAAGTATCCTTGTCTGGTACAATGCCTTTTCCTTGATATTCTCTGATTAATGCTTGCTTTGACCCCTTCGTATAGTTTACTTTATTCATGTGAATTCTATCATTGAACGATTATAGAACGCAATAGTTCCTCATATGAAAGTTACTTTTGGTGAGGATTTTTGGGAGGGAGTCCCACATTGGCTGATTTAGGGAATGATCATGGGTTTATAAGTAAGGAATACATCTCCATTGGTATGAGGCCTTTTGGGAAAACCAAAAGCAAAGCCATGAGAGTTTATGCTCAAAGTGGACAATATCATATCATTGTGGAGGTTCGTGATTTCTAACATGTATCAGAGTCATGCCCTTAACTTAGCCATGTCAATAGGATCCTCAAATGTCGAAGAAATTGTGAGCCTCGAAGGTGTAGTCAAAAGTGACTCAAGTGTCAAACAAAGGGTGTATTTTGTTTGAGGACTCCAAAGAATGAGTCGAGCCTCGATTAACGGAAGGCTGTTCGAGGCCTCCATAGGCCTCAAGGGAGGCTTTATAGTGTACTTTGTTTGAGGGGAGGATTGTTGGGAGGGAGTCCCACATCGGCTAATTTAGGGATGATCGTGGATTTATGACTCAAGTGTCAAACAAAGGGTGTATTTTGTTTGAGGACTCCAAAGAATGAGTCGAGCCTCGATTAACGGAAGGCTGTTCGAGGCCTCCATAGGCCTCAAGGGAGGCTTTATAGTGTACTTTGTTTGAGGGGAGGATTGTTGGGAGGGAGTCCCACATCGGCTAATTTAGGGATGATCGTGGATTTATGAGTAAGAAATATATCTCCATTGGTATGAGGCCATTTGGGGAAACCAAAAGTAAAGTCACGAGAGCGTATGCTCAAAATGGACAAATATCGTATCAATGTGGAGAGTCGTGATTCCTAACAACTTTGCCTTTTAACTGTTGAGGATTGTTGGGAGAGGAGTCCCACATTGACTAATTAAGGGGTTGATCATGAGTTTATAAGTAAGGAATATTATCTCTATTGGTACGAGACCTTTTGGGAAAACCAAAAGTAAAACCATGAGAGCTTATGCTCAAAGTGGACAATACCATACCATTGTGTTGGTTCGTGATTTCTAACATTAACTTCTCCCTCCCTCTCTTTCTCTTCCCCATTGCTTGTCTGCATAGTCTCCATTCCTTGTTTCTTCTGCATTATTATGAATCACATCGATAATATGTGCTATTAATATTAAAGAGACAATATATGTGGAGTTCGGTGTTGGGCTACAGATACTATATTATTCCCATTTAAGTTTGACATAAAAACTTTCCATATGGGAGATATAGACACATTGACCTTCTCAACCAAGTTCTTATATTCAGCAAAATTGTGCATTTGAAAGAATATTTCGTTTCTACCAGATGTTTGTTACTATTTAAACATGAAGTTTTGAACTTATCCGATTCCTATGGTTATATGTTTTGGCTGCTAACGTTAAGTAAGCAAAATAATTTTCAGAGGAACTTTAATGTTATCAAGGTAGCTCATCTCTCTTCCTCTCAATCTTCTTACAACAGATTCAATTTAATATTATAAATCGAAAGTATTTGATTTGATATATTTGTTTTTCTTCTTTTCTTCTTTTCAATGAAACTCTTCTAAAGGGTTGCTGCGAGTATTAGTTCCTATCTCGTAACCTTTATTCATGCCGAAGGCTTTCGAGAGCATTTTATTTGATCATCACACATGTTTGTTCTTTGCAGCATCGTAGTAAGTTGCATAAGAGAAGTTCTGATGTAATCACAAGAGGAATGAAAGTCACTGCTTATTATGGCTTGAAGACGCCTCCCTATGAACTTGTAAGTGACCAACCTAATGATGTGCATACTTATTTTGCAACCAAAGTCCCATGTTTTATGTTCTTGCAGATATTTGCTTCTTTCTCATAGAATTCCATTGCTAGTCACTTGATGGTGCGAGATAGACGTCATTTTTAGAAGGAAACATATATGCTCAACTTTGATTTTCAGCTAGCCCGGCACTAACTCTTCGATATGTTTGTTGATCATCAAAGGCAGACTTGCAAAATCAAGCTTTATGTTTTTCCATTTACTTTTAACAGTCTTGTGTATGTGAGATCCCATATCGGTTGGGGCGGAAAACAAAACATTCTTTATAAGGATGTGAAAACCTCTCCCTAGCAGACGCGTTTTAAAAACCTTGAGGGAAGGCCCAGAAGGGATAACCCAAAGAGGACAATATCTGCTAGCGATGGGCTTGAGCTGTTACAATATTAAGCCTACAAATTTCGACCAAACTGATTATAAATTTGTCATATTTGTAGCATTACTGGTAAGAAGTGGATATATATCTAACAACATATAACACTGCTATGGTTCATTTTGCTCTCTACTTTCAGGATGCTTTAGAACCATATATGAGCCGGAAGACATTGGAGGTTCACTGGGGTAAACATCACCGTAATTACGTTGAAGGTCTAAACAAACAACTGAGCCAAAATGATATTTTATATGGCCACACTTTAGATGAACTTCTCAAAGTAACATATAACAATGGAAATCCTTTACCTGAGTTTAACAATGCTGCCCAGGTACTTCAATGTTAATCCATGGTCTACTTCAAATTATTTGGCTAAAGTTAAACCTTCCTGATATTCTTGTTGACTCATTCATTGCAAGTCTTTTAGTTACTTTTTCAAAAGCTACTTGACCTTACCTGATTGTTCCTTTATCATTAATAAAACATACGTGAGATTATCTGTGAGACCCCACATTGGTTGGAGAGAAGAACGAAGCATTCCTTATAAGGGTGTGGAAACCTTTTCTTAGCAGACGCGTTTTAAAACCATGAGCCTGAAGGCGATACGTAAGGGACCAAAGCGGACAATATCTGCTAGCGATGGGCTTGGATTGTTACAAATGGTATTAGAGCCAGCCACTGGACGGTGTGCTCTTCGCTGGGCCCCTTAGGAGGGTGGATTGTGAGAGTCCACATTAGTTGGAGAGGAAAACGAAACATTCCTTATAAGGGTGTGGAAACCTCTCTAGTATATGCGTTTTAAAACCGTGAGGCTAACAGTGATACGTAACGGGCCAAAGTGGACAATATCTGCTAGCGGTGGGATTGGACGGTTACATTATCCCTCTTTTAAAAATATATATATATATATATATATATTGGGACAGAAGGATTTCTTTGAAGCATGATTACCAGACTTGGGACAGAAGGATTCCTTATTTCGTCTCTATCCAAATTTCTTAATGAAAGATCTTTGATCTCATTAACCCATAAAAGACGAGGTCTTGTGCGCAAATGTCCTGTGCGTTCTACATCATTGTATGAGATAATAGAATTGTTTTTTTTATAGAATGGATCTTGAAAAAACATGTCTGATTTGTAGATTTTGTAGTAACGTGTATGATAAAGTTCGGGAAGTGCACGATATCATTTCCTTTATGTATGTTCAGGTCTGGAATCATGACTTCTTTTGGGAATCCATGCAACCTGGAGGAGGAAGCATGCCCATACTTGGTGTTCTACAACAAATTGAAAAAGATTTTGGTTCTTTTGCCAATTTCAAGGACAAGTTTATACAAGCATCTCTTTCACACTTTGGTTCTGGCTGGGTTTGGCTTGTTTGTAAGTTTTCAGACATTGATTCAACCTTTTTATTTAGTGCTCTTTAACACCGTTATAATAAGTACTGTTTGGTGGAAGTTTTTGAGTTCTTTCCTGAGTGTTATTTTGACTAAACTTAGTGGCTGTTAGTGCGCTTATCATATTTTATAGTTGGTCTCCTTTTGACTCGCTCCTTGTGAGATCTCACGTCGATTGGAGAGGGGTGAAGCATTCCTTATAAGGGTATCGAAACCTCTCCCTAGTAGACGCGTTTTAAAACTGTGAGGCTGACGGCGATACGTAACGAGCCAAAGCGGATAAGGTCTGTTTGTGGTGAGCTTGGGCTGTTACAAATGGTATTAGAGCCAGACATTGGGCAGTGTGCGAGCGAGGACGCTGGCCCCAAGGGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGGAACGAAGCATTCCTTATAAGGGTGTGGAGACCTCTTCCTATTAGACGCGTTCTAAAACCGTGAGGCTAACGACGATATGTAACGAGCCAAAGCAGACAATATCTGCTTGCGGTGAGCTTGGGTTGTTACAAATGGTATAAGAGCCACACTGGGTGGTGTGCCAGCGAGGACACTAGCCCCCAAGGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGGAACGAAGCATTCCTTATAAGGGTGTGGAGACCTCTCCCTAGTAGACGCGTTTTAAAATCATGAGGCTTACGGCGATACGTAATGAGTCAAAGCAGACAATATCTGCTTGCGGTGAGCTTGGGTTGTTACAAATGGTATCAGAGCCAGACACTGGGTGGTGTGCCAACGAGGACGTTGGCTCCCAAGGGGGGTGGATTATGAGATCCCACGTCGGTTGGAGAAGGGAACGAAGCATTCCTCGTAAGGGTATGGAAACCTCTCCCTAATAGACGTGTTTTAAAATCATGAGCCTGGCAGCGATACGTAATAGACCAGTCTAGGAAATCTGCAACCATTTATGGTTGATGTTAGATATGCAAACGTTTATCTTCTTTCTACTGCCATTTCCCCTTCAACTCTATGATCTAAAGCTCGACAAAATATGGTGCCGATCGTTTTTCTATATTCGGATTGAGAGTTCTGTTTCATGACTGATCATTTAACACAGTCTACTTTGATTCTCCTGAACTGTCATTCATTGTATCAGTGAAGAGACAAGAAAAACGACTCGCCGTGATCACAACTTCGAATGCGACAAGCCCGCTTGTCTGGGATGACATTGTAAGTCAATGTTCGATTTTGAGTACAAGGTTCTTTTATTCCCAGAAATTTGATTTACCATACTTTGTTGTGCAGCCAATCATCTGCTTGGATATGTGGGAGGTATGAAATTCTTTTCTTTCTTGATCAAATATTAGGTTATGTTTCTTCAGTTGAGCTGATCATAGATGATAACATGTCGTTGTTTTTTCCTTCCCCAGCATGCTTATTATCTGGATTACAAGGTATGAACCTCTGCCGGAATGCCTGTCGTATTTAATTTATTGTTTAAAAGTATCATTTTGGTCCTAGTTCATTCAAATGTCCAAATTTAGTGTAACAACCTAGCCCACCGCTAATCGATATTGTTTTTTTTTTTTTACTTTCTCTTTCGGGCTTCCTCTCAAGATTTTTAAAACGTGTGTGATAAGGAGAGGTTTCCACACCCTTATAAAGTATGTTTCGTTCCCCTCTCCAACCGATGTGGGATCTCACATTCCACCCCCATTCGGGGCCTAGCGTTCTCGTTGACATTCGTTCCCTTCTCTGTGGCCCTGTATCCTTGCTGGCACACTGCCCAGTGTCCGACTCTGATACCATTTGTAACAGCCCAAGCCCACTGCTAGTAGATATTGTCTTTTTTGGACTTTCCCTTTCGGGCTTCCCCTCAAGATTTTTAAAACGTGTCTGATAAGAAGTTTCCATACCCTTATAAAGTATGTTTTGTTCCCTTCTCCAACCGACGTGGGATCTCACATTCCACCCCCATTCAAGGCCTAGCGTCCTCGTTAGCATTCGTTCCCTTCTTTGTGGCCCAGCGTCCTTGCTGGCACACTGCTCAGTGTCTGGCTTTGATACCATGTGTAACAGACCAAGCCCACTGTTAGTAGATATTGTCCTCTTTGGACTTTCCCTTTCGGGCTTCCTCTCAAGATTTTTAAAACGTGTCTTCTAGGGAAAGGTTTTCACACCCTTATAAAGAATAATCCGTTCCTCTCTCCAACTGATACAGTTAGTTTATACCGTGCTTATTGTTAGTTTGAAGTTAACTTTTATCGAACTTAGTAAAAGAAAAATAATAGTTCCATTCAAGAAAAGGCACAATGTGATTGATTATCTTTCCAAAATTTCTCTGTTGATCATTGATTTGTATTTGTATCACACAGAATGATAAAAAAGAGTATGTCAATGTGTTCATGGACCATCTCGTATCGTGGAATGCAGCGATGGGGCGTATGGCTCGAGCAGAGTGCTTCGTGAATTTAGGCGAACCGAAGATCCCTGTAGCTTAATGACATTCATTGATACTAGAGGTACTCGCAAACGATCCAATGAAGCGACCGGGGAAATCTCGAAGCCTTGTGTTTTTCTTTTATCGAATCGGGTTGTAGGTTTGACAAGTTTTGTTCTCTACATAAGATTTCCGTCGTGATTTTGTAGTAACATGAAGGATAGCTTCCTTAGAAATGTATAGGAATCTTCGAACATGTCATTTTCGTAATATAAGCCTTTTTTCATATATA

mRNA sequence

ATTTAGTATATTATTTATTACTATATCTATTCTTAACAGAATTCTTATCCTTGGCCGGGTGCATATAGCGGGAAAACAGTACTTTCTTCTTCTTACACTGAGAGTAGGCTGAACAACGGCGGCAACATTTCGCTCACCAGTAAACTTGAACTACAGCTCTGTAATTTTCCCAAAAACGTGACGAAAAACTCTTCCCAGTCCCACCCATTTTTTCTCCTCCTTCAATCTGTTCGGTTTCCAAGGAAACGCGAAGGAATAGCACCAACTCATTTTCCAACGGCTGCAGCAGCTAGTGAATATTTAGTTGCTAGAGATACAAAACAATGATTTCTTGCAACAATCCTCTGAACGTTAACTCTCAGCTTCTGCTGTGCAATTCTTCCCAGCAGTTAAAGAGCACCAAGTATCCTTGTCTGCATCGTAGTAAGTTGCATAAGAGAAGTTCTGATGTAATCACAAGAGGAATGAAAGTCACTGCTTATTATGGCTTGAAGACGCCTCCCTATGAACTTGATGCTTTAGAACCATATATGAGCCGGAAGACATTGGAGGTTCACTGGGGTAAACATCACCGTAATTACGTTGAAGGTCTAAACAAACAACTGAGCCAAAATGATATTTTATATGGCCACACTTTAGATGAACTTCTCAAAGTAACATATAACAATGGAAATCCTTTACCTGAGTTTAACAATGCTGCCCAGGTCTGGAATCATGACTTCTTTTGGGAATCCATGCAACCTGGAGGAGGAAGCATGCCCATACTTGGTGTTCTACAACAAATTGAAAAAGATTTTGGTTCTTTTGCCAATTTCAAGGACAAGTTTATACAAGCATCTCTTTCACACTTTGGTTCTGGCTGGGTTTGGCTTGTTTTGAAGAGACAAGAAAAACGACTCGCCGTGATCACAACTTCGAATGCGACAAGCCCGCTTGTCTGGGATGACATTCCAATCATCTGCTTGGATATGTGGGAGCATGCTTATTATCTGGATTACAAGAATGATAAAAAAGAGTATGTCAATGTGTTCATGGACCATCTCGTATCGTGGAATGCAGCGATGGGGCGTATGGCTCGAGCAGAGTGCTTCGTGAATTTAGGCGAACCGAAGATCCCTGTAGCTTAATGACATTCATTGATACTAGAGGTACTCGCAAACGATCCAATGAAGCGACCGGGGAAATCTCGAAGCCTTGTGTTTTTCTTTTATCGAATCGGGTTGTAGGTTTGACAAGTTTTGTTCTCTACATAAGATTTCCGTCGTGATTTTGTAGTAACATGAAGGATAGCTTCCTTAGAAATGTATAGGAATCTTCGAACATGTCATTTTCGTAATATAAGCCTTTTTTCATATATA

Coding sequence (CDS)

ATGATTTCTTGCAACAATCCTCTGAACGTTAACTCTCAGCTTCTGCTGTGCAATTCTTCCCAGCAGTTAAAGAGCACCAAGTATCCTTGTCTGCATCGTAGTAAGTTGCATAAGAGAAGTTCTGATGTAATCACAAGAGGAATGAAAGTCACTGCTTATTATGGCTTGAAGACGCCTCCCTATGAACTTGATGCTTTAGAACCATATATGAGCCGGAAGACATTGGAGGTTCACTGGGGTAAACATCACCGTAATTACGTTGAAGGTCTAAACAAACAACTGAGCCAAAATGATATTTTATATGGCCACACTTTAGATGAACTTCTCAAAGTAACATATAACAATGGAAATCCTTTACCTGAGTTTAACAATGCTGCCCAGGTCTGGAATCATGACTTCTTTTGGGAATCCATGCAACCTGGAGGAGGAAGCATGCCCATACTTGGTGTTCTACAACAAATTGAAAAAGATTTTGGTTCTTTTGCCAATTTCAAGGACAAGTTTATACAAGCATCTCTTTCACACTTTGGTTCTGGCTGGGTTTGGCTTGTTTTGAAGAGACAAGAAAAACGACTCGCCGTGATCACAACTTCGAATGCGACAAGCCCGCTTGTCTGGGATGACATTCCAATCATCTGCTTGGATATGTGGGAGCATGCTTATTATCTGGATTACAAGAATGATAAAAAAGAGTATGTCAATGTGTTCATGGACCATCTCGTATCGTGGAATGCAGCGATGGGGCGTATGGCTCGAGCAGAGTGCTTCGTGAATTTAGGCGAACCGAAGATCCCTGTAGCTTAA

Protein sequence

MISCNNPLNVNSQLLLCNSSQQLKSTKYPCLHRSKLHKRSSDVITRGMKVTAYYGLKTPPYELDALEPYMSRKTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLPEFNNAAQVWNHDFFWESMQPGGGSMPILGVLQQIEKDFGSFANFKDKFIQASLSHFGSGWVWLVLKRQEKRLAVITTSNATSPLVWDDIPIICLDMWEHAYYLDYKNDKKEYVNVFMDHLVSWNAAMGRMARAECFVNLGEPKIPVA

Homology

[Close]

BLAST of Carg17775 vs. NCBI nr
Match: XP_022958535.1 (superoxide dismutase [Fe] 3, chloroplastic [Cucurbita moschata] >XP_022958543.1 superoxide dismutase [Fe] 3, chloroplastic [Cucurbita moschata] >KAG7032679.1 Superoxide dismutase [Fe] 3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 565.8 bits (1457), Expect = 1.9e-157
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0


Query: 1   MISCNNPLNVNSQLLLCNSSQQLKSTKYPCLHRSKLHKRSSDVITRGMKVTAYYGLKTPP 60
           MISCNNPLNVNSQLLLCNSSQQLKSTKYPCLHRSKLHKRSSDVITRGMKVTAYYGLKTPP
Sbjct: 1   MISCNNPLNVNSQLLLCNSSQQLKSTKYPCLHRSKLHKRSSDVITRGMKVTAYYGLKTPP 60

Query: 61  YELDALEPYMSRKTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP 120
           YELDALEPYMSRKTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP
Sbjct: 61  YELDALEPYMSRKTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP 120

Query: 121 EFNNAAQVWNHDFFWESMQPGGGSMPILGVLQQIEKDFGSFANFKDKFIQASLSHFGSGW 180
           EFNNAAQVWNHDFFWESMQPGGGSMPILGVLQQIEKDFGSFANFKDKFIQASLSHFGSGW
Sbjct: 121 EFNNAAQVWNHDFFWESMQPGGGSMPILGVLQQIEKDFGSFANFKDKFIQASLSHFGSGW 180

Query: 181 VWLVLKRQEKRLAVITTSNATSPLVWDDIPIICLDMWEHAYYLDYKNDKKEYVNVFMDHL 240
           VWLVLKRQEKRLAVITTSNATSPLVWDDIPIICLDMWEHAYYLDYKNDKKEYVNVFMDHL
Sbjct: 181 VWLVLKRQEKRLAVITTSNATSPLVWDDIPIICLDMWEHAYYLDYKNDKKEYVNVFMDHL 240

Query: 241 VSWNAAMGRMARAECFVNLGEPKIPVA 268
           VSWNAAMGRMARAECFVNLGEPKIPVA
Sbjct: 241 VSWNAAMGRMARAECFVNLGEPKIPVA 267

[Close]

BLAST of Carg17775 vs. NCBI nr
Match: XP_023523987.1 (superoxide dismutase [Fe] 3, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 554.3 bits (1427), Expect = 5.8e-154
Identity = 261/267 (97.75%), Postives = 263/267 (98.50%), Query Frame = 0


Query: 1   MISCNNPLNVNSQLLLCNSSQQLKSTKYPCLHRSKLHKRSSDVITRGMKVTAYYGLKTPP 60
           MISC NPLNVNSQLLLCNSSQQLKS K+PCLHRSKLHKRSSDV TRGMKVTAYYGLKTPP
Sbjct: 1   MISCYNPLNVNSQLLLCNSSQQLKSVKHPCLHRSKLHKRSSDVTTRGMKVTAYYGLKTPP 60

Query: 61  YELDALEPYMSRKTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP 120
           YELDALEPYMSRKTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP
Sbjct: 61  YELDALEPYMSRKTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP 120

Query: 121 EFNNAAQVWNHDFFWESMQPGGGSMPILGVLQQIEKDFGSFANFKDKFIQASLSHFGSGW 180
           EFNNAAQVWNHDFFWESMQPGGGSMPILGVLQQIEKDFGSF NFKDKFIQASLSHFGSGW
Sbjct: 121 EFNNAAQVWNHDFFWESMQPGGGSMPILGVLQQIEKDFGSFTNFKDKFIQASLSHFGSGW 180

Query: 181 VWLVLKRQEKRLAVITTSNATSPLVWDDIPIICLDMWEHAYYLDYKNDKKEYVNVFMDHL 240
           VWLVLKRQEKRLAVITTSNATSPLVWDDIPIICLDMWEHAYYLDYKNDKKEYVN+FMDHL
Sbjct: 181 VWLVLKRQEKRLAVITTSNATSPLVWDDIPIICLDMWEHAYYLDYKNDKKEYVNMFMDHL 240

Query: 241 VSWNAAMGRMARAECFVNLGEPKIPVA 268
           VSWNAAMGRMARAECFVNLGEPKIPVA
Sbjct: 241 VSWNAAMGRMARAECFVNLGEPKIPVA 267

[Close]

BLAST of Carg17775 vs. NCBI nr
Match: XP_022990032.1 (superoxide dismutase [Fe] 3, chloroplastic [Cucurbita maxima] >XP_022990033.1 superoxide dismutase [Fe] 3, chloroplastic [Cucurbita maxima])

HSP 1 Score: 550.1 bits (1416), Expect = 1.1e-152
Identity = 260/267 (97.38%), Postives = 262/267 (98.13%), Query Frame = 0


Query: 1   MISCNNPLNVNSQLLLCNSSQQLKSTKYPCLHRSKLHKRSSDVITRGMKVTAYYGLKTPP 60
           MISC NPLNVNSQLLL NSSQQLKSTK+PCLHRSKLHK SSDV TRGMKVTAYYGLKTPP
Sbjct: 1   MISCYNPLNVNSQLLLSNSSQQLKSTKHPCLHRSKLHKESSDVTTRGMKVTAYYGLKTPP 60

Query: 61  YELDALEPYMSRKTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP 120
           YELDALEPYMSRKTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP
Sbjct: 61  YELDALEPYMSRKTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP 120

Query: 121 EFNNAAQVWNHDFFWESMQPGGGSMPILGVLQQIEKDFGSFANFKDKFIQASLSHFGSGW 180
           EFNNAAQVWNHDFFWESMQPGGGSMPILGVLQQIEKDFGSF NFKDKFIQASLSHFGSGW
Sbjct: 121 EFNNAAQVWNHDFFWESMQPGGGSMPILGVLQQIEKDFGSFTNFKDKFIQASLSHFGSGW 180

Query: 181 VWLVLKRQEKRLAVITTSNATSPLVWDDIPIICLDMWEHAYYLDYKNDKKEYVNVFMDHL 240
           VWLVLKRQEKRLAVITTSNATSPLVWDDIPIICLDMWEHAYYLDYKNDKKEYVNVF+DHL
Sbjct: 181 VWLVLKRQEKRLAVITTSNATSPLVWDDIPIICLDMWEHAYYLDYKNDKKEYVNVFVDHL 240

Query: 241 VSWNAAMGRMARAECFVNLGEPKIPVA 268
           VSWNAAMGRMARAECFVNLGEPKIPVA
Sbjct: 241 VSWNAAMGRMARAECFVNLGEPKIPVA 267

[Close]

BLAST of Carg17775 vs. NCBI nr
Match: AWW05332.1 (superoxide dismutase [Fe] 3 [Cucurbita pepo])

HSP 1 Score: 549.7 bits (1415), Expect = 1.4e-152
Identity = 260/267 (97.38%), Postives = 262/267 (98.13%), Query Frame = 0


Query: 1   MISCNNPLNVNSQLLLCNSSQQLKSTKYPCLHRSKLHKRSSDVITRGMKVTAYYGLKTPP 60
           MISC NPLNVNSQLLL NSSQQLKSTK+PCLHRSKLHK SSDV TRGMKVTAYYGLKTPP
Sbjct: 1   MISCYNPLNVNSQLLLSNSSQQLKSTKHPCLHRSKLHKGSSDVTTRGMKVTAYYGLKTPP 60

Query: 61  YELDALEPYMSRKTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP 120
           YELDALEPYMSRKTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP
Sbjct: 61  YELDALEPYMSRKTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP 120

Query: 121 EFNNAAQVWNHDFFWESMQPGGGSMPILGVLQQIEKDFGSFANFKDKFIQASLSHFGSGW 180
           EFNNAAQVWNHDFFWESMQPGGGSMPILGVLQQIEKDFGSF NFKDKFIQASLSHFGSGW
Sbjct: 121 EFNNAAQVWNHDFFWESMQPGGGSMPILGVLQQIEKDFGSFTNFKDKFIQASLSHFGSGW 180

Query: 181 VWLVLKRQEKRLAVITTSNATSPLVWDDIPIICLDMWEHAYYLDYKNDKKEYVNVFMDHL 240
           VWLVLKRQEKRLAVITTSNATSPLVWDDIPIICLDMWEHAYYLDYKNDKKEYVN+FMDHL
Sbjct: 181 VWLVLKRQEKRLAVITTSNATSPLVWDDIPIICLDMWEHAYYLDYKNDKKEYVNMFMDHL 240

Query: 241 VSWNAAMGRMARAECFVNLGEPKIPVA 268
           VSWNAAMGRMARAECFVNLGEPKIPVA
Sbjct: 241 VSWNAAMGRMARAECFVNLGEPKIPVA 267

[Close]

BLAST of Carg17775 vs. NCBI nr
Match: KAG6601981.1 (Superoxide dismutase [Fe] 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 524.6 bits (1350), Expect = 4.9e-145
Identity = 245/246 (99.59%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 22  QLKSTKYPCLHRSKLHKRSSDVITRGMKVTAYYGLKTPPYELDALEPYMSRKTLEVHWGK 81
           QLKSTKYPCLHRSKLHKRSSDVIT+GMKVTAYYGLKTPPYELDALEPYMSRKTLEVHWGK
Sbjct: 147 QLKSTKYPCLHRSKLHKRSSDVITKGMKVTAYYGLKTPPYELDALEPYMSRKTLEVHWGK 206

Query: 82  HHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLPEFNNAAQVWNHDFFWESMQPG 141
           HHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLPEFNNAAQVWNHDFFWESMQPG
Sbjct: 207 HHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLPEFNNAAQVWNHDFFWESMQPG 266

Query: 142 GGSMPILGVLQQIEKDFGSFANFKDKFIQASLSHFGSGWVWLVLKRQEKRLAVITTSNAT 201
           GGSMPILGVLQQIEKDFGSFANFKDKFIQASLSHFGSGWVWLVLKRQEKRLAVITTSNAT
Sbjct: 267 GGSMPILGVLQQIEKDFGSFANFKDKFIQASLSHFGSGWVWLVLKRQEKRLAVITTSNAT 326

Query: 202 SPLVWDDIPIICLDMWEHAYYLDYKNDKKEYVNVFMDHLVSWNAAMGRMARAECFVNLGE 261
           SPLVWDDIPIICLDMWEHAYYLDYKNDKKEYVNVFMDHLVSWNAAMGRMARAECFVNLGE
Sbjct: 327 SPLVWDDIPIICLDMWEHAYYLDYKNDKKEYVNVFMDHLVSWNAAMGRMARAECFVNLGE 386

Query: 262 PKIPVA 268
           PKIPVA
Sbjct: 387 PKIPVA 392

[Close]

BLAST of Carg17775 vs. ExPASy Swiss-Prot
Match: Q9FMX0 (Superoxide dismutase [Fe] 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FSD3 PE=1 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 6.5e-108
Identity = 179/252 (71.03%), Postives = 213/252 (84.52%), Query Frame = 0


Query: 16  LCNSSQQLKSTKYPCLHRSKLHKRSSDVITRGMKVTAYYGLKTPPYELDALEPYMSRKTL 75
           + +SS +LKS K   L+ S   +R S     G+KV AYYGLKTPPY LDALEPYMSR+TL
Sbjct: 14  ISDSSIRLKSPK--LLNLSNQQRRRSLRSRGGLKVEAYYGLKTPPYPLDALEPYMSRRTL 73

Query: 76  EVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLPEFNNAAQVWNHDFFW 135
           EVHWGKHHR YV+ LNKQL ++D LYG+T++EL+K TYNNGNPLPEFNNAAQV+NHDFFW
Sbjct: 74  EVHWGKHHRGYVDNLNKQLGKDDRLYGYTMEELIKATYNNGNPLPEFNNAAQVYNHDFFW 133

Query: 136 ESMQPGGGSMPILGVLQQIEKDFGSFANFKDKFIQASLSHFGSGWVWLVLKRQEKRLAVI 195
           ESMQPGGG  P  GVL+QI+KDFGSF NF++KF  A+L+ FGSGWVWLVLKR+E+RL V+
Sbjct: 134 ESMQPGGGDTPQKGVLEQIDKDFGSFTNFREKFTNAALTQFGSGWVWLVLKREERRLEVV 193

Query: 196 TTSNATSPLVWDDIPIICLDMWEHAYYLDYKNDKKEYVNVFMDHLVSWNAAMGRMARAEC 255
            TSNA +PLVWDDIPIIC+D+WEH+YYLDYKND+ +Y+N F++HLVSWNAAM RMARAE 
Sbjct: 194 KTSNAINPLVWDDIPIICVDVWEHSYYLDYKNDRAKYINTFLNHLVSWNAAMSRMARAEA 253

Query: 256 FVNLGEPKIPVA 268
           FVNLGEP IP+A
Sbjct: 254 FVNLGEPNIPIA 263

[Close]

BLAST of Carg17775 vs. ExPASy Swiss-Prot
Match: Q5VSB7 (Superoxide dismutase [Fe] 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0143000 PE=2 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 1.8e-89
Identity = 149/222 (67.12%), Postives = 182/222 (81.98%), Query Frame = 0


Query: 46  RGMKVTAYYGLKTPPYELDALEPYMSRKTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTL 105
           R  KV AYY L TPPY+LDALEPY+S++T+E+HWGKH ++YV+ LNKQL+   + YG+TL
Sbjct: 35  RYSKVVAYYALTTPPYKLDALEPYISKRTVELHWGKHQQDYVDSLNKQLA-TSMFYGYTL 94

Query: 106 DELLKVTYNNGNPLPEFNNAAQVWNHDFFWESMQPGGGSMPILGVLQQIEKDFGSFANFK 165
           +EL+K  YNNGNPLPE+NNAAQVWNH FFWESMQP GG  P  GVLQQIEKDFGSF NF+
Sbjct: 95  EELIKEAYNNGNPLPEYNNAAQVWNHHFFWESMQPEGGGSPGRGVLQQIEKDFGSFTNFR 154

Query: 166 DKFIQASLSHFGSGWVWLVLKRQEKRLAVITTSNATSPLVWDDIPIICLDMWEHAYYLDY 225
           ++FI+++LS  GSGWVWLVLKR+E++ +V+ T NA SPL   DIP+I LD+WEHAYYLDY
Sbjct: 155 EEFIRSALSLLGSGWVWLVLKRKERKFSVVHTQNAISPLALGDIPLINLDLWEHAYYLDY 214

Query: 226 KNDKKEYVNVFMDHLVSWNAAMGRMARAECFVNLGEPKIPVA 268
           K+D++ YV  F+DHLVSW+    RM RAE FVNLGEP IPVA
Sbjct: 215 KDDRRMYVTNFIDHLVSWDTVTLRMMRAEAFVNLGEPNIPVA 255

[Close]

BLAST of Carg17775 vs. ExPASy Swiss-Prot
Match: Q9LU64 (Superoxide dismutase [Fe] 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FSD2 PE=1 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 4.0e-65
Identity = 113/219 (51.60%), Postives = 150/219 (68.49%), Query Frame = 0


Query: 50  VTAYYGLKTPPYELDALEPYMSRKTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELL 109
           +TA + LK PPY LDALEP+MSR+TL+ HWGKHH+ YVE LNKQ+   D L   +L+E++
Sbjct: 49  ITAGFELKPPPYPLDALEPHMSRETLDYHWGKHHKTYVENLNKQILGTD-LDALSLEEVV 108

Query: 110 KVTYNNGNPLPEFNNAAQVWNHDFFWESMQPGGGSMPILGVLQQIEKDFGSFANFKDKFI 169
            ++YN GN LP FNNAAQ WNH+FFWES+QPGGG  P   +L+ IE+DFGSF  F ++F 
Sbjct: 109 LLSYNKGNMLPAFNNAAQAWNHEFFWESIQPGGGGKPTGELLRLIERDFGSFEEFLERFK 168

Query: 170 QASLSHFGSGWVWLVL---------------KRQEKRLAVITTSNATSPLVWDDIPIICL 229
            A+ S+FGSGW WL                 K ++K+L ++ T NA +PLVWD  P++ +
Sbjct: 169 SAAASNFGSGWTWLAYKANRLDVANAVNPLPKEEDKKLVIVKTPNAVNPLVWDYSPLLTI 228

Query: 230 DMWEHAYYLDYKNDKKEYVNVFMDHLVSWNAAMGRMARA 254
           D WEHAYYLD++N + EY+N FM+ LVSW     R+  A
Sbjct: 229 DTWEHAYYLDFENRRAEYINTFMEKLVSWETVSTRLESA 266

[Close]

BLAST of Carg17775 vs. ExPASy Swiss-Prot
Match: P28759 (Superoxide dismutase [Fe], chloroplastic OS=Glycine max OX=3847 GN=SODB PE=2 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.1e-62
Identity = 111/231 (48.05%), Postives = 154/231 (66.67%), Query Frame = 0


Query: 43  VITRGMKVTAYYGLKTPPYELDALEPYMSRKTLEVHWGKHHRNYVEGLNKQLSQNDILYG 102
           +I  G KV A + LK PPY L+ LEP MS++TLE HWGKHH+ YVE L KQ+   + L G
Sbjct: 16  LIKEGPKVNAKFELKPPPYPLNGLEPVMSQQTLEFHWGKHHKTYVENLKKQVVGTE-LDG 75

Query: 103 HTLDELLKVTYNNGNPLPEFNNAAQVWNHDFFWESMQPGGGSMPILGVLQQIEKDFGSFA 162
            +L+E++  +YN G+ LP FNNAAQVWNHDFFWE M+PGGG  P   +L+ IE+DFGSF 
Sbjct: 76  KSLEEIIVTSYNKGDILPAFNNAAQVWNHDFFWECMKPGGGGKPSGELLELIERDFGSFV 135

Query: 163 NFKDKFIQASLSHFGSGWVWLVLKR---------------QEKRLAVITTSNATSPLVWD 222
            F D+F  A+ + FGSGW WL  +                ++ +L V+ + NA +PLVW 
Sbjct: 136 KFLDEFKAAAATQFGSGWAWLAYRARKFDGENVANPPSPDEDNKLVVLKSPNAVNPLVWG 195

Query: 223 D-IPIICLDMWEHAYYLDYKNDKKEYVNVFMDHLVSWNAAMGRMARAECFV 258
              P++ +D+WEHAYYLD++N + +Y++VFMD LVSW+A   R+ +A+  +
Sbjct: 196 GYYPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWDAVSSRLEQAKALI 245

[Close]

BLAST of Carg17775 vs. ExPASy Swiss-Prot
Match: P22302 (Superoxide dismutase [Fe], chloroplastic (Fragment) OS=Nicotiana plumbaginifolia OX=4092 GN=SODB PE=2 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.9e-62
Identity = 105/200 (52.50%), Postives = 143/200 (71.50%), Query Frame = 0


Query: 54  YGLKTPPYELDALEPYMSRKTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTY 113
           + L+ PPY +DALEP+MS +T E HWGKHHR YV+ LNKQ+   + L G TL++++ VTY
Sbjct: 2   FELQPPPYPMDALEPHMSSRTFEFHWGKHHRAYVDNLNKQIDGTE-LDGKTLEDIILVTY 61

Query: 114 NNGNPLPEFNNAAQVWNHDFFWESMQPGGGSMPILGVLQQIEKDFGSFANFKDKFIQASL 173
           N G PLP FNNAAQ WNH FFWESM+P GG  P   +L+ I +DFGS+  F  +F  A+ 
Sbjct: 62  NKGAPLPAFNNAAQAWNHQFFWESMKPNGGGEPSGELLELINRDFGSYDAFVKEFKAAAA 121

Query: 174 SHFGSGWVWLVLKRQEKRLAVITTSNATSPLVWDDIPIICLDMWEHAYYLDYKNDKKEYV 233
           + FGSGW WL  K +EK+LA++ T NA +PLV    P++ +D+WEHAYYLD++N + +Y+
Sbjct: 122 TQFGSGWAWLAYKPEEKKLALVKTPNAENPLVLGYTPLLTIDVWEHAYYLDFQNRRPDYI 181

Query: 234 NVFMDHLVSWNAAMGRMARA 254
           ++FM+ LVSW A   R+  A
Sbjct: 182 SIFMEKLVSWEAVSSRLKAA 200

[Close]

BLAST of Carg17775 vs. ExPASy TrEMBL
Match: A0A6J1H3S8 (Superoxide dismutase OS=Cucurbita moschata OX=3662 GN=LOC111459735 PE=3 SV=1)

HSP 1 Score: 565.8 bits (1457), Expect = 9.3e-158
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0


Query: 1   MISCNNPLNVNSQLLLCNSSQQLKSTKYPCLHRSKLHKRSSDVITRGMKVTAYYGLKTPP 60
           MISCNNPLNVNSQLLLCNSSQQLKSTKYPCLHRSKLHKRSSDVITRGMKVTAYYGLKTPP
Sbjct: 1   MISCNNPLNVNSQLLLCNSSQQLKSTKYPCLHRSKLHKRSSDVITRGMKVTAYYGLKTPP 60

Query: 61  YELDALEPYMSRKTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP 120
           YELDALEPYMSRKTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP
Sbjct: 61  YELDALEPYMSRKTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP 120

Query: 121 EFNNAAQVWNHDFFWESMQPGGGSMPILGVLQQIEKDFGSFANFKDKFIQASLSHFGSGW 180
           EFNNAAQVWNHDFFWESMQPGGGSMPILGVLQQIEKDFGSFANFKDKFIQASLSHFGSGW
Sbjct: 121 EFNNAAQVWNHDFFWESMQPGGGSMPILGVLQQIEKDFGSFANFKDKFIQASLSHFGSGW 180

Query: 181 VWLVLKRQEKRLAVITTSNATSPLVWDDIPIICLDMWEHAYYLDYKNDKKEYVNVFMDHL 240
           VWLVLKRQEKRLAVITTSNATSPLVWDDIPIICLDMWEHAYYLDYKNDKKEYVNVFMDHL
Sbjct: 181 VWLVLKRQEKRLAVITTSNATSPLVWDDIPIICLDMWEHAYYLDYKNDKKEYVNVFMDHL 240

Query: 241 VSWNAAMGRMARAECFVNLGEPKIPVA 268
           VSWNAAMGRMARAECFVNLGEPKIPVA
Sbjct: 241 VSWNAAMGRMARAECFVNLGEPKIPVA 267

[Close]

BLAST of Carg17775 vs. ExPASy TrEMBL
Match: A0A6J1JS32 (Superoxide dismutase OS=Cucurbita maxima OX=3661 GN=LOC111487045 PE=3 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 5.3e-153
Identity = 260/267 (97.38%), Postives = 262/267 (98.13%), Query Frame = 0


Query: 1   MISCNNPLNVNSQLLLCNSSQQLKSTKYPCLHRSKLHKRSSDVITRGMKVTAYYGLKTPP 60
           MISC NPLNVNSQLLL NSSQQLKSTK+PCLHRSKLHK SSDV TRGMKVTAYYGLKTPP
Sbjct: 1   MISCYNPLNVNSQLLLSNSSQQLKSTKHPCLHRSKLHKESSDVTTRGMKVTAYYGLKTPP 60

Query: 61  YELDALEPYMSRKTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP 120
           YELDALEPYMSRKTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP
Sbjct: 61  YELDALEPYMSRKTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP 120

Query: 121 EFNNAAQVWNHDFFWESMQPGGGSMPILGVLQQIEKDFGSFANFKDKFIQASLSHFGSGW 180
           EFNNAAQVWNHDFFWESMQPGGGSMPILGVLQQIEKDFGSF NFKDKFIQASLSHFGSGW
Sbjct: 121 EFNNAAQVWNHDFFWESMQPGGGSMPILGVLQQIEKDFGSFTNFKDKFIQASLSHFGSGW 180

Query: 181 VWLVLKRQEKRLAVITTSNATSPLVWDDIPIICLDMWEHAYYLDYKNDKKEYVNVFMDHL 240
           VWLVLKRQEKRLAVITTSNATSPLVWDDIPIICLDMWEHAYYLDYKNDKKEYVNVF+DHL
Sbjct: 181 VWLVLKRQEKRLAVITTSNATSPLVWDDIPIICLDMWEHAYYLDYKNDKKEYVNVFVDHL 240

Query: 241 VSWNAAMGRMARAECFVNLGEPKIPVA 268
           VSWNAAMGRMARAECFVNLGEPKIPVA
Sbjct: 241 VSWNAAMGRMARAECFVNLGEPKIPVA 267

[Close]

BLAST of Carg17775 vs. ExPASy TrEMBL
Match: A0A2Z4GT75 (Superoxide dismutase OS=Cucurbita pepo OX=3663 PE=2 SV=1)

HSP 1 Score: 549.7 bits (1415), Expect = 6.9e-153
Identity = 260/267 (97.38%), Postives = 262/267 (98.13%), Query Frame = 0


Query: 1   MISCNNPLNVNSQLLLCNSSQQLKSTKYPCLHRSKLHKRSSDVITRGMKVTAYYGLKTPP 60
           MISC NPLNVNSQLLL NSSQQLKSTK+PCLHRSKLHK SSDV TRGMKVTAYYGLKTPP
Sbjct: 1   MISCYNPLNVNSQLLLSNSSQQLKSTKHPCLHRSKLHKGSSDVTTRGMKVTAYYGLKTPP 60

Query: 61  YELDALEPYMSRKTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP 120
           YELDALEPYMSRKTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP
Sbjct: 61  YELDALEPYMSRKTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP 120

Query: 121 EFNNAAQVWNHDFFWESMQPGGGSMPILGVLQQIEKDFGSFANFKDKFIQASLSHFGSGW 180
           EFNNAAQVWNHDFFWESMQPGGGSMPILGVLQQIEKDFGSF NFKDKFIQASLSHFGSGW
Sbjct: 121 EFNNAAQVWNHDFFWESMQPGGGSMPILGVLQQIEKDFGSFTNFKDKFIQASLSHFGSGW 180

Query: 181 VWLVLKRQEKRLAVITTSNATSPLVWDDIPIICLDMWEHAYYLDYKNDKKEYVNVFMDHL 240
           VWLVLKRQEKRLAVITTSNATSPLVWDDIPIICLDMWEHAYYLDYKNDKKEYVN+FMDHL
Sbjct: 181 VWLVLKRQEKRLAVITTSNATSPLVWDDIPIICLDMWEHAYYLDYKNDKKEYVNMFMDHL 240

Query: 241 VSWNAAMGRMARAECFVNLGEPKIPVA 268
           VSWNAAMGRMARAECFVNLGEPKIPVA
Sbjct: 241 VSWNAAMGRMARAECFVNLGEPKIPVA 267

[Close]

BLAST of Carg17775 vs. ExPASy TrEMBL
Match: A0A1L5JHX4 (Superoxide dismutase OS=Luffa aegyptiaca OX=3670 PE=2 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 1.2e-144
Identity = 247/267 (92.51%), Postives = 256/267 (95.88%), Query Frame = 0


Query: 1   MISCNNPLNVNSQLLLCNSSQQLKSTKYPCLHRSKLHKRSSDVITRGMKVTAYYGLKTPP 60
           MISC NPLNVNSQLLL N SQQLKSTK+P LH+S+LHKRSSDV TRGMK TAYYGLKTPP
Sbjct: 1   MISCYNPLNVNSQLLLSNFSQQLKSTKHPYLHQSQLHKRSSDVTTRGMKATAYYGLKTPP 60

Query: 61  YELDALEPYMSRKTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP 120
           Y+L ALEPYMSR+TLEVHWGKHH NYVEGLNKQLSQNDILYG+TLDELLKVTYNNGNPLP
Sbjct: 61  YDLGALEPYMSRRTLEVHWGKHHLNYVEGLNKQLSQNDILYGYTLDELLKVTYNNGNPLP 120

Query: 121 EFNNAAQVWNHDFFWESMQPGGGSMPILGVLQQIEKDFGSFANFKDKFIQASLSHFGSGW 180
           EFNNAAQVWNHDFFWESMQPGGG+MPILGVLQQIEKDFGSF NF+DKFIQASLS FGSGW
Sbjct: 121 EFNNAAQVWNHDFFWESMQPGGGNMPILGVLQQIEKDFGSFTNFRDKFIQASLSLFGSGW 180

Query: 181 VWLVLKRQEKRLAVITTSNATSPLVWDDIPIICLDMWEHAYYLDYKNDKKEYVNVFMDHL 240
           VWLVLKRQEKRLAVITTSNA SPL+WDDIPIICLDMWEHAYYLDYKNDKKEYVNVFMDHL
Sbjct: 181 VWLVLKRQEKRLAVITTSNAMSPLLWDDIPIICLDMWEHAYYLDYKNDKKEYVNVFMDHL 240

Query: 241 VSWNAAMGRMARAECFVNLGEPKIPVA 268
           VSWNAAMGRMARAECFVNLGEPKIPVA
Sbjct: 241 VSWNAAMGRMARAECFVNLGEPKIPVA 267

[Close]

BLAST of Carg17775 vs. ExPASy TrEMBL
Match: A0A6J1CLC0 (Superoxide dismutase OS=Momordica charantia OX=3673 GN=LOC111012008 PE=3 SV=1)

HSP 1 Score: 516.9 bits (1330), Expect = 4.9e-143
Identity = 243/267 (91.01%), Postives = 255/267 (95.51%), Query Frame = 0


Query: 1   MISCNNPLNVNSQLLLCNSSQQLKSTKYPCLHRSKLHKRSSDVITRGMKVTAYYGLKTPP 60
           MISC NPLNVNSQLLL NSSQQ KS K+P LH+SKLHKRSSD+  RGMKVTAYYGLKTPP
Sbjct: 1   MISCYNPLNVNSQLLLTNSSQQFKSPKHPYLHQSKLHKRSSDITPRGMKVTAYYGLKTPP 60

Query: 61  YELDALEPYMSRKTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP 120
           YELDALEPY+SR+TLEVHWGKHHRNYVEGLNKQLSQND LYG+TLDELLKVTYNNGNPLP
Sbjct: 61  YELDALEPYLSRRTLEVHWGKHHRNYVEGLNKQLSQNDTLYGYTLDELLKVTYNNGNPLP 120

Query: 121 EFNNAAQVWNHDFFWESMQPGGGSMPILGVLQQIEKDFGSFANFKDKFIQASLSHFGSGW 180
           EFNNAAQVWNHDFFWESMQPGGG+MPILGVLQQIEKDFGSF+NFKDKFI++SLS FGSGW
Sbjct: 121 EFNNAAQVWNHDFFWESMQPGGGNMPILGVLQQIEKDFGSFSNFKDKFIESSLSLFGSGW 180

Query: 181 VWLVLKRQEKRLAVITTSNATSPLVWDDIPIICLDMWEHAYYLDYKNDKKEYVNVFMDHL 240
           VWLVLKRQEK+LAVI TSNA SPLVWDDIPIICLDMWEHAYYLDYKNDKKEYV+VFMDHL
Sbjct: 181 VWLVLKRQEKQLAVIKTSNAISPLVWDDIPIICLDMWEHAYYLDYKNDKKEYVDVFMDHL 240

Query: 241 VSWNAAMGRMARAECFVNLGEPKIPVA 268
           VSWNAA GRMARAECFVNLGEPKIPVA
Sbjct: 241 VSWNAATGRMARAECFVNLGEPKIPVA 267

[Close]

BLAST of Carg17775 vs. TAIR 10
Match: AT5G23310.1 (Fe superoxide dismutase 3 )

HSP 1 Score: 391.7 bits (1005), Expect = 4.6e-109
Identity = 179/252 (71.03%), Postives = 213/252 (84.52%), Query Frame = 0


Query: 16  LCNSSQQLKSTKYPCLHRSKLHKRSSDVITRGMKVTAYYGLKTPPYELDALEPYMSRKTL 75
           + +SS +LKS K   L+ S   +R S     G+KV AYYGLKTPPY LDALEPYMSR+TL
Sbjct: 14  ISDSSIRLKSPK--LLNLSNQQRRRSLRSRGGLKVEAYYGLKTPPYPLDALEPYMSRRTL 73

Query: 76  EVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLPEFNNAAQVWNHDFFW 135
           EVHWGKHHR YV+ LNKQL ++D LYG+T++EL+K TYNNGNPLPEFNNAAQV+NHDFFW
Sbjct: 74  EVHWGKHHRGYVDNLNKQLGKDDRLYGYTMEELIKATYNNGNPLPEFNNAAQVYNHDFFW 133

Query: 136 ESMQPGGGSMPILGVLQQIEKDFGSFANFKDKFIQASLSHFGSGWVWLVLKRQEKRLAVI 195
           ESMQPGGG  P  GVL+QI+KDFGSF NF++KF  A+L+ FGSGWVWLVLKR+E+RL V+
Sbjct: 134 ESMQPGGGDTPQKGVLEQIDKDFGSFTNFREKFTNAALTQFGSGWVWLVLKREERRLEVV 193

Query: 196 TTSNATSPLVWDDIPIICLDMWEHAYYLDYKNDKKEYVNVFMDHLVSWNAAMGRMARAEC 255
            TSNA +PLVWDDIPIIC+D+WEH+YYLDYKND+ +Y+N F++HLVSWNAAM RMARAE 
Sbjct: 194 KTSNAINPLVWDDIPIICVDVWEHSYYLDYKNDRAKYINTFLNHLVSWNAAMSRMARAEA 253

Query: 256 FVNLGEPKIPVA 268
           FVNLGEP IP+A
Sbjct: 254 FVNLGEPNIPIA 263

[Close]

BLAST of Carg17775 vs. TAIR 10
Match: AT5G51100.1 (Fe superoxide dismutase 2 )

HSP 1 Score: 249.6 bits (636), Expect = 2.8e-66
Identity = 113/219 (51.60%), Postives = 150/219 (68.49%), Query Frame = 0


Query: 50  VTAYYGLKTPPYELDALEPYMSRKTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELL 109
           +TA + LK PPY LDALEP+MSR+TL+ HWGKHH+ YVE LNKQ+   D L   +L+E++
Sbjct: 49  ITAGFELKPPPYPLDALEPHMSRETLDYHWGKHHKTYVENLNKQILGTD-LDALSLEEVV 108

Query: 110 KVTYNNGNPLPEFNNAAQVWNHDFFWESMQPGGGSMPILGVLQQIEKDFGSFANFKDKFI 169
            ++YN GN LP FNNAAQ WNH+FFWES+QPGGG  P   +L+ IE+DFGSF  F ++F 
Sbjct: 109 LLSYNKGNMLPAFNNAAQAWNHEFFWESIQPGGGGKPTGELLRLIERDFGSFEEFLERFK 168

Query: 170 QASLSHFGSGWVWLVL---------------KRQEKRLAVITTSNATSPLVWDDIPIICL 229
            A+ S+FGSGW WL                 K ++K+L ++ T NA +PLVWD  P++ +
Sbjct: 169 SAAASNFGSGWTWLAYKANRLDVANAVNPLPKEEDKKLVIVKTPNAVNPLVWDYSPLLTI 228

Query: 230 DMWEHAYYLDYKNDKKEYVNVFMDHLVSWNAAMGRMARA 254
           D WEHAYYLD++N + EY+N FM+ LVSW     R+  A
Sbjct: 229 DTWEHAYYLDFENRRAEYINTFMEKLVSWETVSTRLESA 266

[Close]

BLAST of Carg17775 vs. TAIR 10
Match: AT4G25100.1 (Fe superoxide dismutase 1 )

HSP 1 Score: 231.9 bits (590), Expect = 6.1e-61
Identity = 104/205 (50.73%), Postives = 142/205 (69.27%), Query Frame = 0


Query: 50  VTAYYGLKTPPYELDALEPYMSRKTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELL 109
           VTA Y LK PP+ LDALEP+MS++TLE HWGKHHR YV+ L KQ+   + L G  L+ ++
Sbjct: 7   VTANYVLKPPPFALDALEPHMSKQTLEFHWGKHHRAYVDNLKKQVLGTE-LEGKPLEHII 66

Query: 110 KVTYNNGNPLPEFNNAAQVWNHDFFWESMQPGGGSMPILGVLQQIEKDFGSFANFKDKFI 169
             TYNNG+ LP FNNAAQ WNH+FFWESM+PGGG  P   +L  +E+DF S+  F ++F 
Sbjct: 67  HSTYNNGDLLPAFNNAAQAWNHEFFWESMKPGGGGKPSGELLALLERDFTSYEKFYEEFN 126

Query: 170 QASLSHFGSGWVWLVLKRQEKRLAVITTSNATSPLVWDDIPIICLDMWEHAYYLDYKNDK 229
            A+ + FG+GW WL    +  +L V+ T NA +PLV    P++ +D+WEHAYYLD++N +
Sbjct: 127 AAAATQFGAGWAWLAYSNE--KLKVVKTPNAVNPLVLGSFPLLTIDVWEHAYYLDFQNRR 186

Query: 230 KEYVNVFMDHLVSWNAAMGRMARAE 255
            +Y+  FM +LVSW A   R+  A+
Sbjct: 187 PDYIKTFMTNLVSWEAVSARLEAAK 208

[Close]

BLAST of Carg17775 vs. TAIR 10
Match: AT4G25100.3 (Fe superoxide dismutase 1 )

HSP 1 Score: 231.9 bits (590), Expect = 6.1e-61
Identity = 104/205 (50.73%), Postives = 142/205 (69.27%), Query Frame = 0


Query: 50  VTAYYGLKTPPYELDALEPYMSRKTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELL 109
           VTA Y LK PP+ LDALEP+MS++TLE HWGKHHR YV+ L KQ+   + L G  L+ ++
Sbjct: 7   VTANYVLKPPPFALDALEPHMSKQTLEFHWGKHHRAYVDNLKKQVLGTE-LEGKPLEHII 66

Query: 110 KVTYNNGNPLPEFNNAAQVWNHDFFWESMQPGGGSMPILGVLQQIEKDFGSFANFKDKFI 169
             TYNNG+ LP FNNAAQ WNH+FFWESM+PGGG  P   +L  +E+DF S+  F ++F 
Sbjct: 67  HSTYNNGDLLPAFNNAAQAWNHEFFWESMKPGGGGKPSGELLALLERDFTSYEKFYEEFN 126

Query: 170 QASLSHFGSGWVWLVLKRQEKRLAVITTSNATSPLVWDDIPIICLDMWEHAYYLDYKNDK 229
            A+ + FG+GW WL    +  +L V+ T NA +PLV    P++ +D+WEHAYYLD++N +
Sbjct: 127 AAAATQFGAGWAWLAYSNE--KLKVVKTPNAVNPLVLGSFPLLTIDVWEHAYYLDFQNRR 186

Query: 230 KEYVNVFMDHLVSWNAAMGRMARAE 255
            +Y+  FM +LVSW A   R+  A+
Sbjct: 187 PDYIKTFMTNLVSWEAVSARLEAAK 208

[Close]

BLAST of Carg17775 vs. TAIR 10
Match: AT4G25100.2 (Fe superoxide dismutase 1 )

HSP 1 Score: 231.9 bits (590), Expect = 6.1e-61
Identity = 104/205 (50.73%), Postives = 142/205 (69.27%), Query Frame = 0


Query: 50  VTAYYGLKTPPYELDALEPYMSRKTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELL 109
           VTA Y LK PP+ LDALEP+MS++TLE HWGKHHR YV+ L KQ+   + L G  L+ ++
Sbjct: 7   VTANYVLKPPPFALDALEPHMSKQTLEFHWGKHHRAYVDNLKKQVLGTE-LEGKPLEHII 66

Query: 110 KVTYNNGNPLPEFNNAAQVWNHDFFWESMQPGGGSMPILGVLQQIEKDFGSFANFKDKFI 169
             TYNNG+ LP FNNAAQ WNH+FFWESM+PGGG  P   +L  +E+DF S+  F ++F 
Sbjct: 67  HSTYNNGDLLPAFNNAAQAWNHEFFWESMKPGGGGKPSGELLALLERDFTSYEKFYEEFN 126

Query: 170 QASLSHFGSGWVWLVLKRQEKRLAVITTSNATSPLVWDDIPIICLDMWEHAYYLDYKNDK 229
            A+ + FG+GW WL    +  +L V+ T NA +PLV    P++ +D+WEHAYYLD++N +
Sbjct: 127 AAAATQFGAGWAWLAYSNE--KLKVVKTPNAVNPLVLGSFPLLTIDVWEHAYYLDFQNRR 186

Query: 230 KEYVNVFMDHLVSWNAAMGRMARAE 255
            +Y+  FM +LVSW A   R+  A+
Sbjct: 187 PDYIKTFMTNLVSWEAVSARLEAAK 208

The following BLAST results are available for this feature:

BLAST of Carg17775 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958535.1	1.9e-157	100.00	superoxide dismutase [Fe] 3, chloroplastic [Cucurbita moschata] >XP_022958543.1 ...	[more]
XP_023523987.1	5.8e-154	97.75	superoxide dismutase [Fe] 3, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022990032.1	1.1e-152	97.38	superoxide dismutase [Fe] 3, chloroplastic [Cucurbita maxima] >XP_022990033.1 su...	[more]
AWW05332.1	1.4e-152	97.38	superoxide dismutase [Fe] 3 [Cucurbita pepo]	[more]
KAG6601981.1	4.9e-145	99.59	Superoxide dismutase [Fe] 3, chloroplastic, partial [Cucurbita argyrosperma subs...	[more]

BLAST of Carg17775 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMX0	6.5e-108	71.03	Superoxide dismutase [Fe] 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FS...	[more]
Q5VSB7	1.8e-89	67.12	Superoxide dismutase [Fe] 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39...	[more]
Q9LU64	4.0e-65	51.60	Superoxide dismutase [Fe] 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FS...	[more]
P28759	1.1e-62	48.05	Superoxide dismutase [Fe], chloroplastic OS=Glycine max OX=3847 GN=SODB PE=2 SV=...	[more]
P22302	1.9e-62	52.50	Superoxide dismutase [Fe], chloroplastic (Fragment) OS=Nicotiana plumbaginifolia...	[more]

BLAST of Carg17775 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H3S8	9.3e-158	100.00	Superoxide dismutase OS=Cucurbita moschata OX=3662 GN=LOC111459735 PE=3 SV=1	[more]
A0A6J1JS32	5.3e-153	97.38	Superoxide dismutase OS=Cucurbita maxima OX=3661 GN=LOC111487045 PE=3 SV=1	[more]
A0A2Z4GT75	6.9e-153	97.38	Superoxide dismutase OS=Cucurbita pepo OX=3663 PE=2 SV=1	[more]
A0A1L5JHX4	1.2e-144	92.51	Superoxide dismutase OS=Luffa aegyptiaca OX=3670 PE=2 SV=1	[more]
A0A6J1CLC0	4.9e-143	91.01	Superoxide dismutase OS=Momordica charantia OX=3673 GN=LOC111012008 PE=3 SV=1	[more]

BLAST of Carg17775 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23310.1	4.6e-109	71.03	Fe superoxide dismutase 3	[more]
AT5G51100.1	2.8e-66	51.60	Fe superoxide dismutase 2	[more]
AT4G25100.1	6.1e-61	50.73	Fe superoxide dismutase 1	[more]
AT4G25100.3	6.1e-61	50.73	Fe superoxide dismutase 1	[more]
AT4G25100.2	6.1e-61	50.73	Fe superoxide dismutase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001189	Manganese/iron superoxide dismutase	PRINTS	PR01703	MNSODISMTASE	coord: 175..183 score: 72.35 coord: 213..225 score: 70.72 coord: 78..91 score: 55.67 coord: 122..135 score: 48.82 coord: 57..68 score: 51.37
IPR036324	Manganese/iron superoxide dismutase, N-terminal domain superfamily	GENE3D	1.10.287.990	Fe,Mn superoxide dismutase (SOD) domain	coord: 71..138 e-value: 2.0E-18 score: 68.8
IPR036324	Manganese/iron superoxide dismutase, N-terminal domain superfamily	SUPERFAMILY	46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain	coord: 48..140
IPR019831	Manganese/iron superoxide dismutase, N-terminal	PFAM	PF00081	Sod_Fe_N	coord: 54..138 e-value: 1.4E-19 score: 70.3
IPR036314	Manganese/iron superoxide dismutase, C-terminal domain superfamily	GENE3D	3.55.40.20		coord: 146..259 e-value: 9.5E-41 score: 140.3
IPR036314	Manganese/iron superoxide dismutase, C-terminal domain superfamily	SUPERFAMILY	54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain	coord: 142..252
IPR019832	Manganese/iron superoxide dismutase, C-terminal	PFAM	PF02777	Sod_Fe_C	coord: 150..247 e-value: 2.1E-34 score: 117.7
None	No IPR available	PIRSR	PIRSR000349-1	PIRSR000349-1	coord: 54..251 e-value: 3.3E-62 score: 207.5
None	No IPR available	PANTHER	PTHR42769:SF10	SUPEROXIDE DISMUTASE [FE] 3, CHLOROPLASTIC	coord: 24..267
None	No IPR available	PANTHER	PTHR42769	SUPEROXIDE DISMUTASE	coord: 24..267
IPR019833	Manganese/iron superoxide dismutase, binding site	PROSITE	PS00088	SOD_MN	coord: 215..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17775-RA	Carg17775-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019430	removal of superoxide radicals
biological_process	GO:0006801	superoxide metabolic process
cellular_component	GO:0042644	chloroplast nucleoid
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004784	superoxide dismutase activity