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Carg17605 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATAGAAGATATGACAACGACGATTGCGGTATCGGGAGCTACTGAAACACAGAAGAAGAATAGAATTCAGGTTTCGAATACCAAGAAACCACTCTTCTTCTACGTTAATCTTGCTAAGGTATTCATAAATCGTTCTCTCGTTCTTTTCAATTTGGTTACGTTGAGCGAGGATTTGGAATTTATTCTGATTTTGTTTGGTTCTCGAGAAATGGAATTGAAATGTGTAATGTAAGAACGAACGACGAATCGGTGGGATTCTTTTGATTTGTTTTATGATTCGAACGATTTCGTTCGGATAATCGTTTGATTTTAGTTTCTGGATTGTTTAGTTTTATTGGAAATTTGAATCATCTTGCTCTCAGTTTGCCCTAAGATCCCCTTCGTTATCGAGATTCGAGATTACGATCTTAGCAAGATTTTGAAATTCATTATGTTTTTGTTTGATTCTTGAAAAAATGGAATCGAAATGTATAATCTAAGAACGAACGATGAATCGGTGCATTTCTTTTTATTTGCTTTATGATTCGAACAATTTCATTTAGATAATCGTTTGATTTTAGTTTCTTGGTTTAAAAAATCAAGATTCGAGATTATGATTCTTTACATCAATGTGTTTAATTCTTGATTCAGAGGTACATTCAACAGCACAATGAGGTTGAACTATCTGCATTGGGAATGGGTACGGTTTTAGTTCTTGAAAATCTTTTAATTTTTTAGCTATCGGTACATGAATTTTTTGATTTTTTTTATCTCAAATTCTACAGCAATCACTACCGTTGTCACAATTGCAGAGATTCTAAAGAACAATGGATTGGCTACCGAGAAGAGTAATTCTGTTATCATATTTGTTCATTCACGTAATTTCTTGGTAAAATGGTTATCACTGATAATTTGTATGATTTTGTTGTGAAACAGAAGTTTTGACTTCTACGGTCGGCATGAAGGATGAGAACAAAGGTCGTTTAGTTCAGAAAGCTAAGGTTCGTTCATTTTTCTTAGTTAATGATAAGTTTTTCGTGTTAATGATAAGCTAAGGTTCGTTCAAATATCATACCATTGTGGAGAGTCGTGTTCATCTAACATTTTGAAACTTTTTAGCTATGAACGATTCTTGTGGGATTGAGTTTTGAAACGTTTCTTGTTTTGGGTCGATTTTGATAGATTGAGATTGTTCTGGGAAAGTCGGAGAAATTTGATTCTTTGATGACGGCGGCCACGGTGACGGCGGAGGCGGCAGCGGGAGGCGGCGAGGAGAAAAAAAAGGCAGGAGAGGAAAGCAAGGAGGGGCAGTAG ATAGAAGATATGACAACGACGATTGCGGTATCGGGAGCTACTGAAACACAGAAGAAGAATAGAATTCAGGTTTCGAATACCAAGAAACCACTCTTCTTCTACGTTAATCTTGCTAAGAGGTACATTCAACAGCACAATGAGGTTGAACTATCTGCATTGGGAATGGCAATCACTACCGTTGTCACAATTGCAGAGATTCTAAAGAACAATGGATTGGCTACCGAGAAGAAAGTTTTGACTTCTACGGTCGGCATGAAGGATGAGAACAAAGGTCGTTTAGTTCAGAAAGCTAAGTCGGAGAAATTTGATTCTTTGATGACGGCGGCCACGGTGACGGCGGAGGCGGCAGCGGGAGGCGGCGAGGAGAAAAAAAAGGCAGGAGAGGAAAGCAAGGAGGGGCAGTAG ATAGAAGATATGACAACGACGATTGCGGTATCGGGAGCTACTGAAACACAGAAGAAGAATAGAATTCAGGTTTCGAATACCAAGAAACCACTCTTCTTCTACGTTAATCTTGCTAAGAGGTACATTCAACAGCACAATGAGGTTGAACTATCTGCATTGGGAATGGCAATCACTACCGTTGTCACAATTGCAGAGATTCTAAAGAACAATGGATTGGCTACCGAGAAGAAAGTTTTGACTTCTACGGTCGGCATGAAGGATGAGAACAAAGGTCGTTTAGTTCAGAAAGCTAAGTCGGAGAAATTTGATTCTTTGATGACGGCGGCCACGGTGACGGCGGAGGCGGCAGCGGGAGGCGGCGAGGAGAAAAAAAAGGCAGGAGAGGAAAGCAAGGAGGGGCAGTAG IEDMTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKSEKFDSLMTAATVTAEAAAGGGEEKKKAGEESKEGQ Homology
BLAST of Carg17605 vs. NCBI nr
Match: KAG7021166.1 (hypothetical protein SDJN02_17854, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 243.4 bits (620), Expect = 1.1e-60 Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0
BLAST of Carg17605 vs. NCBI nr
Match: XP_022965411.1 (uncharacterized protein At2g34160-like [Cucurbita maxima]) HSP 1 Score: 233.0 bits (593), Expect = 1.5e-57 Identity = 132/141 (93.62%), Postives = 132/141 (93.62%), Query Frame = 0
BLAST of Carg17605 vs. NCBI nr
Match: KAG6586319.1 (hypothetical protein SDJN03_19052, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 230.7 bits (587), Expect = 7.3e-57 Identity = 131/138 (94.93%), Postives = 131/138 (94.93%), Query Frame = 0
BLAST of Carg17605 vs. NCBI nr
Match: XP_023537985.1 (uncharacterized protein At2g34160-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 228.4 bits (581), Expect = 3.6e-56 Identity = 132/142 (92.96%), Postives = 132/142 (92.96%), Query Frame = 0
BLAST of Carg17605 vs. NCBI nr
Match: XP_022938043.1 (uncharacterized protein At2g34160-like [Cucurbita moschata]) HSP 1 Score: 222.6 bits (566), Expect = 2.0e-54 Identity = 128/138 (92.75%), Postives = 128/138 (92.75%), Query Frame = 0
BLAST of Carg17605 vs. ExPASy Swiss-Prot
Match: O22969 (Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 PE=1 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 1.5e-33 Identity = 79/111 (71.17%), Postives = 90/111 (81.08%), Query Frame = 0
BLAST of Carg17605 vs. ExPASy TrEMBL
Match: A0A6J1HLL6 (uncharacterized protein At2g34160-like OS=Cucurbita maxima OX=3661 GN=LOC111465325 PE=4 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 7.1e-58 Identity = 132/141 (93.62%), Postives = 132/141 (93.62%), Query Frame = 0
BLAST of Carg17605 vs. ExPASy TrEMBL
Match: A0A6J1FHQ7 (uncharacterized protein At2g34160-like OS=Cucurbita moschata OX=3662 GN=LOC111444252 PE=4 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 9.7e-55 Identity = 128/138 (92.75%), Postives = 128/138 (92.75%), Query Frame = 0
BLAST of Carg17605 vs. ExPASy TrEMBL
Match: A0A6J1CQ10 (uncharacterized protein At2g34160 OS=Momordica charantia OX=3673 GN=LOC111013094 PE=4 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 8.2e-46 Identity = 116/133 (87.22%), Postives = 116/133 (87.22%), Query Frame = 0
BLAST of Carg17605 vs. ExPASy TrEMBL
Match: A0A5D3D4G4 (Alba DNA/RNA-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001630 PE=4 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 3.1e-45 Identity = 118/141 (83.69%), Postives = 120/141 (85.11%), Query Frame = 0
BLAST of Carg17605 vs. ExPASy TrEMBL
Match: A0A0A0LG69 (Alba domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010240 PE=4 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 3.1e-45 Identity = 119/144 (82.64%), Postives = 120/144 (83.33%), Query Frame = 0
BLAST of Carg17605 vs. TAIR 10
Match: AT3G04620.1 (Alba DNA/RNA-binding protein ) HSP 1 Score: 156.0 bits (393), Expect = 2.1e-38 Identity = 93/133 (69.92%), Postives = 101/133 (75.94%), Query Frame = 0
BLAST of Carg17605 vs. TAIR 10
Match: AT1G29250.1 (Alba DNA/RNA-binding protein ) HSP 1 Score: 146.0 bits (367), Expect = 2.2e-35 Identity = 80/111 (72.07%), Postives = 91/111 (81.98%), Query Frame = 0
BLAST of Carg17605 vs. TAIR 10
Match: AT2G34160.1 (Alba DNA/RNA-binding protein ) HSP 1 Score: 143.7 bits (361), Expect = 1.1e-34 Identity = 79/111 (71.17%), Postives = 90/111 (81.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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