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Carg17591 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCCGCATCTGCAACCGCCATTCATCGGAATCAGGTGAGTGATGCAGGTTTTTGAGGTGTTTGATTCACAAATTCTTGTTTAAGTTTCGAGAAATGATGAAAGATGATGTTAATACTTGAATCTAGCGAATGAGTTTTGAGTACAGGAGTATCAGGATTTTATTGCTTTAAGCTTAGTTTTCTTTCATACTGATGCTTCGTTTTTAACCAGGTTGATCTGTCCGACTTCATTAACTGGTCTGGTATCGAGTGCCTTAACCAGAATTTCAGCCACACTTTTACAAATGCTCTTAGCCAGGTGCTGTTTGTTATATTTTGACCAGAGATGTTTATCAGTTGCATGTACTTCGTTGTAGTTTCTTGAATTTCTTTACATGGCTGAATAATTCGTTTCTCGATTCAATGAAGTTAAAGATGGTGCTGAGTTAGACTAGCTTTCTTGCAGAATATAATTTCCTTCTCTCTTTTCTTCTAATTGTAAATCTTTCGAGTTTAATATCTTCTTGAGACTTTATGTGGGAATGGTGTATACTTAATGAGTTCTCAATATGTGTCTAATAAATATTGGAAGTGTATTGACTTTGTACCGCTCGTATTTTTTAACACATATTTATTGTGCTAACAAGTGTCCAATATATGTTCAATAAGTGTTAGTGTCAAAGTATCCAACACTTGTCGGGCACGGACGGACACTCTTGCCACATTAAAATGTCTGTGCTTCTTAAGGGTATATGGAAGTTGGTGAATATGAACTTAGCTCTCTTAGGCCAAGTGGCTATGCCGCTTTCTTTTAGAGTCTTATTCTTTATGGCGTATGATTATTGTTAGCATGACTGTCACTTCAGGGGTGGGACACATATGTGGTCTCTGAACTAAAGACATATTAAAAGTCCTTGGAAAACCATTTTCTATTGCATACCGAGCTTTATCAACTACATTAAATTCTCTGTGGGGAGCAGGGCTTGCATTCGTTTATGGGAAGAATTTTGGGCTGGTATCAACGTCTTTCAAAATTCTCTTCTCGTCTTTATAATATTACCCTGTGAAAGAGATGTTGGTCAATTCATTGATAATTCGTACTTCCTTCCACTTGATTTAGAATATGAAGTCGGGTTTTCTATTGCATACTTCCTTCCACTTGATTTTCATTTTCATTTTCATTTTCATTTTAGAAGATATCTTTGTGATATTGAGTCGAGATTTATCCAAATATTATCTCCATTTTTAGTAATACGCATAGTTAGGTTCTTCAGCCATCTGGTATCTTTTGTTTTTTTACCCATCTCCCCACCCCCCTCTTTCACTCTGGATTTTGAAGGCTAAAATCTAAAAAAAGATCAGGTTTTTCACCTGGCTGGTTTCTTTGGGAAGATTAGACACACCATAGACTTTGTCTAGAAGCCTTCATCTTTGTCTGGAAAAAGATCATTTGCTATAGAGATGTCACCTTGTCGTGAAACTTTAGAGTTGAAGCAATTTTCTCACTATTTTGTTGAATCTATGGCTTGCGAGAAATAAAGTATTTTGAGGGTACCGAAGTCTTGGAAGAGGTTTGGAGTTTGGAAAATTTTAATCTCTTGTGGCGTTCTCTTTATCTTTTTATTCTTAACCATTGAACCAACCTACTGTAATTTTGTTTCAAGTTTTTGTTTATAGACTGCTCATCTGTTTGGGTCTATTTTTTAGGCCACTCCTTTTGTGTATTCATTCAGCTTATTAAAAGTTGATGTATCATATGAAGCAAGAGGCTAAAATACCATTTTTGGTCCTTGTAATTTGACACTTGTTCCATTTTAGTTCCTATACTTTCGAATGTAGAATTAATTTAGTCATTATTAATTTGAATGGTACAATAATAATTTTTATTAGAGGAAAGACATTGTGAGTATCTTTTCAACATTTATAGAGGTAGGGCTAATAGATACAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGAAAGTTAATCATGAACAATATAGGGACTAATTTTAAGATTACTAGAAGACGGAGACTACATTTTTTACATTTGAAAGTACATAAGACCAAAATAAAACAAGTATCAAAGTCTGGGGTCAAAATGGTATTTTTGACCTAAAAGAAAATTTTCATGATAAAATAGGCATCTCTTTTTCCCTGTAATTTCTTCCCAACAGCCAATGGAAATTATTATACCGAGGGTTTGAAGCAACTTTTATCTTAAAATAGACTTGTAGGGATAATGATAGCTTGCTTTTGGAGAGTGATGCGGATGAGCAGATTTTGATGTACATACCTTTTAACCAAGTCATTAAATTGCATTCCTTGGTCATCAAGGGACCTGAAGAGGAAGGCAAGTATTCTATTACACCTTTTATTAGTTCTAATTGGTTTATTTTTCTTCTGGATATTTCTATTTCAGTATTGCTTTTCATGTATAACTATAGTTCATCTAATCTATTGGCATATTTTTTTTAACATGTCTTACATGTCCAACGTGGCCAATGAGGGGTATGATCATTCCATTTTGAAGTCTTACTATTGTGATTTTTTTATTATTTTTTTTTTTTTTTATTTTTTATTTGTTCTTGATGTCGTCTTTTTTTTTTTGTTTAGTGTTTTTATTTATTTCTTATTGAGTGCTTTTGTGTACACTAGAGAAGTTGGCATGCTTTTTGAAAGAAGAATAGACTGTTTTTCGAATGATAGATTTCGGTTAGACTATTTCGGATTTATATAATATCCACCATTAAGTTGTTGTTATTTGTATTGGTGGGTTTTTATTTTCAGAGTGGGTGGCGCTTTATTTGGGAGTCGTCGCAAGCTTCTTTTGTGATGCAGGAATGTTTTGAGGGTGGCTTGTGGTTTGGTCAGTGGGGATTATGCTGTGGGGGGGTTTTTTTTTTTAGCAAGGCTGGGTGCTGGATTGTAGTTACGGGCGAGATGAGCGTGAGGTTTTGTCATTAAGTCCTTGCCTTGCTGGTATTGTTCAACCGCCGGCGCGCAGTTGGTTAGTTGCTAGGGAGATCTGGCTACGAATTGCTCGCTTTTGTTCTGCATTGACATATTAG ATGGCTGCCGCATCTGCAACCGCCATTCATCGGAATCAGGTTGATCTGTCCGACTTCATTAACTGGTCTGGTATCGAGTGCCTTAACCAGAATTTCAGCCACACTTTTACAAATGCTCTTAGCCAGACTTGTAGGGATAATGATAGCTTGCTTTTGGAGAGTGATGCGGATGAGCAGATTTTGATGTACATACCTTTTAACCAAGTCATTAAATTGCATTCCTTGGTCATCAAGGGACCTGAAGAGGAAGGCAAGTATTCTATTACACCTTTTATTAGTTCTAATTGGTTTATTTTTCTTCTGGATATTTCTATTTCAAGTGGGTGGCGCTTTATTTGGGAGTCGTCGCAAGCTTCTTTTGTGATGCAGGAATGTTTTGAGGGTGGCTTGTGGTTTGGTCAGTGGGGATTATGCTGTGGGGGGCAAGGCTGGGTGCTGGATTGTAGTTACGGGCGAGATGAGCGTGAGGTTTTGTCATTAAGTCCTTGCCTTGCTGGTATTGTTCAACCGCCGGCGCGCAGTTGGTTAGTTGCTAGGGAGATCTGGCTACGAATTGCTCGCTTTTGTTCTGCATTGACATATTAG ATGGCTGCCGCATCTGCAACCGCCATTCATCGGAATCAGGTTGATCTGTCCGACTTCATTAACTGGTCTGGTATCGAGTGCCTTAACCAGAATTTCAGCCACACTTTTACAAATGCTCTTAGCCAGACTTGTAGGGATAATGATAGCTTGCTTTTGGAGAGTGATGCGGATGAGCAGATTTTGATGTACATACCTTTTAACCAAGTCATTAAATTGCATTCCTTGGTCATCAAGGGACCTGAAGAGGAAGGCAAGTATTCTATTACACCTTTTATTAGTTCTAATTGGTTTATTTTTCTTCTGGATATTTCTATTTCAAGTGGGTGGCGCTTTATTTGGGAGTCGTCGCAAGCTTCTTTTGTGATGCAGGAATGTTTTGAGGGTGGCTTGTGGTTTGGTCAGTGGGGATTATGCTGTGGGGGGCAAGGCTGGGTGCTGGATTGTAGTTACGGGCGAGATGAGCGTGAGGTTTTGTCATTAAGTCCTTGCCTTGCTGGTATTGTTCAACCGCCGGCGCGCAGTTGGTTAGTTGCTAGGGAGATCTGGCTACGAATTGCTCGCTTTTGTTCTGCATTGACATATTAG MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEEEGKYSITPFISSNWFIFLLDISISSGWRFIWESSQASFVMQECFEGGLWFGQWGLCCGGQGWVLDCSYGRDEREVLSLSPCLAGIVQPPARSWLVAREIWLRIARFCSALTY Homology
BLAST of Carg17591 vs. NCBI nr
Match: KAG7021152.1 (PITH domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 408.3 bits (1048), Expect = 3.7e-110 Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0
BLAST of Carg17591 vs. NCBI nr
Match: KAG6586303.1 (PITH domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 174.1 bits (440), Expect = 1.2e-39 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of Carg17591 vs. NCBI nr
Match: XP_022937687.1 (PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_023521129.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >XP_023537940.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 173.3 bits (438), Expect = 2.0e-39 Identity = 85/91 (93.41%), Postives = 87/91 (95.60%), Query Frame = 0
BLAST of Carg17591 vs. NCBI nr
Match: XP_022965977.1 (PITH domain-containing protein At3g04780-like [Cucurbita maxima]) HSP 1 Score: 169.9 bits (429), Expect = 2.2e-38 Identity = 84/91 (92.31%), Postives = 86/91 (94.51%), Query Frame = 0
BLAST of Carg17591 vs. NCBI nr
Match: XP_022946891.1 (PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_022946892.1 PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_022946893.1 PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_022999328.1 PITH domain-containing protein At3g04780-like [Cucurbita maxima] >XP_022999329.1 PITH domain-containing protein At3g04780-like [Cucurbita maxima] >XP_023521729.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >XP_023521946.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >XP_023545536.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >XP_023545537.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >XP_023545538.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >KAG6599300.1 PITH domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030300.1 PITH domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 169.5 bits (428), Expect = 2.9e-38 Identity = 81/91 (89.01%), Postives = 87/91 (95.60%), Query Frame = 0
BLAST of Carg17591 vs. ExPASy Swiss-Prot
Match: Q9SQZ9 (PITH domain-containing protein At3g04780 OS=Arabidopsis thaliana OX=3702 GN=At3g04780 PE=1 SV=2) HSP 1 Score: 120.9 bits (302), Expect = 1.6e-26 Identity = 59/99 (59.60%), Postives = 74/99 (74.75%), Query Frame = 0
BLAST of Carg17591 vs. ExPASy Swiss-Prot
Match: O43396 (Thioredoxin-like protein 1 OS=Homo sapiens OX=9606 GN=TXNL1 PE=1 SV=3) HSP 1 Score: 67.4 bits (163), Expect = 2.0e-10 Identity = 36/88 (40.91%), Postives = 53/88 (60.23%), Query Frame = 0
BLAST of Carg17591 vs. ExPASy Swiss-Prot
Match: Q920J4 (Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3) HSP 1 Score: 65.9 bits (159), Expect = 5.9e-10 Identity = 36/88 (40.91%), Postives = 52/88 (59.09%), Query Frame = 0
BLAST of Carg17591 vs. ExPASy Swiss-Prot
Match: Q8CDN6 (Thioredoxin-like protein 1 OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=3) HSP 1 Score: 65.1 bits (157), Expect = 1.0e-09 Identity = 35/86 (40.70%), Postives = 51/86 (59.30%), Query Frame = 0
BLAST of Carg17591 vs. ExPASy Swiss-Prot
Match: Q9USR1 (Thioredoxin-like protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=txl1 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 6.1e-07 Identity = 34/94 (36.17%), Postives = 51/94 (54.26%), Query Frame = 0
BLAST of Carg17591 vs. ExPASy TrEMBL
Match: A0A6J1FBX4 (PITH domain-containing protein At3g04780-like OS=Cucurbita moschata OX=3662 GN=LOC111444016 PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 9.7e-40 Identity = 85/91 (93.41%), Postives = 87/91 (95.60%), Query Frame = 0
BLAST of Carg17591 vs. ExPASy TrEMBL
Match: A0A6J1HLS0 (PITH domain-containing protein At3g04780-like OS=Cucurbita maxima OX=3661 GN=LOC111465697 PE=4 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 1.1e-38 Identity = 84/91 (92.31%), Postives = 86/91 (94.51%), Query Frame = 0
BLAST of Carg17591 vs. ExPASy TrEMBL
Match: A0A6J1KJE4 (PITH domain-containing protein At3g04780-like OS=Cucurbita maxima OX=3661 GN=LOC111493734 PE=4 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 1.4e-38 Identity = 81/91 (89.01%), Postives = 87/91 (95.60%), Query Frame = 0
BLAST of Carg17591 vs. ExPASy TrEMBL
Match: A0A6J1G4V6 (PITH domain-containing protein At3g04780-like OS=Cucurbita moschata OX=3662 GN=LOC111450832 PE=4 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 1.4e-38 Identity = 81/91 (89.01%), Postives = 87/91 (95.60%), Query Frame = 0
BLAST of Carg17591 vs. ExPASy TrEMBL
Match: A0A5D3D4D2 (PITH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001340 PE=4 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 1.2e-37 Identity = 79/91 (86.81%), Postives = 87/91 (95.60%), Query Frame = 0
BLAST of Carg17591 vs. TAIR 10
Match: AT3G04780.1 (Protein of unknown function (DUF1000) ) HSP 1 Score: 120.9 bits (302), Expect = 1.1e-27 Identity = 59/99 (59.60%), Postives = 74/99 (74.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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