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Carg17589 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGAGTGCGATTCCGGCTGGAAGCGTACTCGCGACTCCGACGACGATCTCACTTTTCTTCCTTGCGTCATCCCTAACTGTAAGCTTCTCTCTCTCTCTCTCTCAATCTCTCTCAATCTCTCTCTCTCCGATTTCTCTGTTCGTCGAAAATGGCGATCGAAATCGAATCATCCAACTCTCTGTTTCTTCTCCTTGTTTTGAAGGTTCTCTCGACTATGGCTGCCAGTCGGCGCCGCCGCCGGTACCAGATAAGCCAGTTCCGAGGAACTCCTCCTTCTTCAATCGTAAGTCATTTTCCGGCCAAGTTTCCCCAAATCTTTCTTCGCTACTTTCCGTCGCAATTTCCGAAGAACAAAACCCTAATTTTAAATAAATAAATAATAATATATATATAGTATAAAATGAGTTGCTTTTATATATATTATATAATATATCTATATATTTTCACACTTTATATTATTTATTTATTGGATAATTTTATAAGTCGAATTTAAAAAATAGTTATTTTGTTTATGATTCTATGTATTTATTTTTATTTTTATTTTATTTTATAATTAAAATTTCAATTATTTAGTCTATTTTAACTTTTAAAATTAAAATTTTAACATATATATTGAAATTGATTATTTTATTTTTATATTTTATTTGGTAACTATAATTTTAGTTTTTAATATTTGGATAATATTTCTTTTTTCTTTTGGTAGTTGTTTTTAATATTTTTAAAATTCTAATTAAATTATTATTAATCCAATTTTTTTTAATAATAAGGATTAAATTTTAAAAAATACTTAAAATATAATTAACGTTTTAATTATTTGTATACTTAATTCAATCTCTTAACCTGTCCTTGCTAATATTAAATATTTTATTTTAAAATAAATGTTTGGAGTTTTTAAATATACGAGACTGCCACCTTTCATATGCTTAGGTTGACTTGATTATGTAAATTATTTATATTGTTTTTAATATAATTAGCGTTTTAATTATTTGTTTTTAATAAAAAAAAAGAAATTAATTAAGTCTTCAAAAAATAATAATTATCAATATGATTTTTTTTTTTATTTATATAATTGTCTTGCAGCTTGCTATTGGGCCTATTGTGGAGAAGGCACGTGTGAGAAGAACAATACGTATGCACACACGTGTGAATGCAGATCTGGCTTCTACAATCTCCTCAACATTTCTGCCTTCCCTTGCTATAGTGATTGTAAGATTCACTATTTACTCAACTAAAAATATAATTTCAATTAATTCGGGTAATATTTAGTCGTTAAATTTTTAAAATATTGTTTTCGAGTAATTTTGAAATTACGATCTAATTTTTGTTATTATTATATTATTTATAGGTACGATCGGGTCGGATTGTGCAAAACTTGGGATTAAAGTTGCTAATGTAAATTCAAGCGATAATGGAAGTGGGGGTTCTGGTACCGGACAAGGTAGGATGTTCGATTTTTTTTTTTTTTTTTTTCGTTTTATATTTTGAAAATATTAAAAAAGATAGGTAGAATTTTAAAAATAGTTCTAGAATCACAATAAAATAAGCAAGGAAATTGTTAATAAATTATAATAATAAATAATAAAAGACATGAATTCCATTTAAATAAAAAAAAAATGTTTTGAATTTTGATATTACATTATTATAATAAAAAACATATCAATTAAAAAAAAATCCACATCGTGATATTTTTAAATAATTTATTTATTCACCATTAATTAAAATATTCATCTTCTTCTGAATAATATATATATATAAATAATAAATTTTTAAAAAATTATGGTTTATTGGGTCAAATTTTCAACCATGTGGTTCTTGTTTTCTACAAATTTTTTTATTCATTGCTTATAATTAAAGTTTTGTCAATTTCTTGATTTATTATTTAATTAATGTTAAAATTTGAGGGTTAATAAAATAATTAGTTTAATTTACATAATGACAATGATATGGGGATTAAAAGTCAAATTAATTTTTTTTTTAATTTTTACTTTTTTAAAAATATTTTATAAATAATTCAAGATCTTGGACATTTTTATTTTAAAAAATCATGATTTTATTTAGCATTCAAGATCTTGATTATTTGTAATAAAATAAAATAAAATAAAATAAAATAAAATAAATAAGTCATGCCTTGCGCATCATCTGGTTGAAAAAGTATGCAAATTATTCCCACGTATTATACATTTATTTTCAAAGTTTGACATTATGACACGTGGCAACAAGTCCACCAACTTGCTTTATTAAAAACAATTAAAAAAGTTATTTTTCCATAAACCTACAAAGTCATTGAAAATGTTGCCTTACAATTTAATCTACCTATATATATATATATAAATAAAGTTTTTGAGAGTAATATTAAGGACATAAGAATTGATAGTTATTACTTATATCAACAAGATATTATAATTTTCAATAACTCAATTATAGAAGCGATAAAGTTGGGAATGTTTGGTTTGGAGGTAGCGATCCTATGTTGGGTATAGAGATGTCCATGGGACAGGGCAAGTAATTGGGTGGATATGGGGAATATAATCTTGTCCCCAACCCAATTTATCTAACGGAAAAAAATGTTCCCCATTCCTTATCTAAATGGAGAATCCCCTCCCTGTTTGGTGTGAGTCCTTGTGGATAAAATAGACATCTCTAGTTGGGTGGCTGTGAGACGGGGAGAAGAACGAAACACCTTTATAAGGGTATGGAAACATCTCTCTAACAGACGTGTTTTAAAAACCTTAAGGGGAAGCGAGAAAACCCAAAGAGGACAATATCTACTAGTGGTGGGTCTGAGCCGTTACAAATGGAATCAGAGTTAGACACCAGGCGATGTGCCAGCTTGGAGGTTGTTCCTCGAAGGGGGGTAGACACGAGGCGAAATGCCAGTAAGGATGCTGGCTCAAGAAGGGAGGTGGATTTGGTGGGGGTCCCATTAGAAAAAGGAATGAGTGCCAACAAAGACTCTAGGCCTTGAAGGGAGTGGATTGTGAGATCCACGTTAATTGGAGAGGAGAACGAAACACCCTTTATAAGGGTGTGGATACCTCTCCATGGATTTTAAAAACCTTGAGGGGAAGCCCAAAGAGGACAATATCTGCCAGCAGTGGACTTAGATCGTTACAATGACTTTCTAAAACTTTTTCTAATAAGTACATGAGTGAGTAAAAAACGTGCTAAAATAACACGTGTTGGTCTAAAAGGACAATCTTCACTTTTAGGATAAAACATCTTACAAAAACTCTATGATAAGTAAGTTCCCTCTTACAACTACTTCAAAACAAGTATATAATGTAACTATGTCATGAGAGATAATCAGATGCACAAGAACGTCATATTCCCTAAGATGTTATTGATGCTCATTTATCCTTCTTCCTTTCATCAGGAAACTCCCTTCTACCAGGAAAGTTTGGGTGGGTGGCTATGGCAATTTTATTTGGCATGACTATGGAGCTTTGGAACTAGCAGATCCTTGATTATATATATAAAATTGATATTCATTTATGTTGTTTACACTATGTTTTGGTTTCATATCGATTGTTATTATATGTTGTGTCTGAGTTTGGTACATTATCATATATATAATAAATAAATCATAGCTCTAGTCATTAGAGGCTGCTGATCACTGTTTTTGTACATATATTCATCTTACTATATTATTTCTACAATTTGCACAAGATATATCCCATCCCAAATATTCATCTTGGTACAATTTACAAATATATCCCATCCCAGATTGAGCAGATCATCAGCAAAAATTTGCACAAGATTTCTTATAATACAGAGATGAAATCAAGCTGACTATCACCAAGAAATCATGAACAAAAATGGAAAAGTTTCGATTCAAATCTCTAATATACGGATTAGAAGAAAGTAAAAGGAATCGAACGAACAGTTTTTAGCAGAACTCACCAATGGAAGGTAATGGAAACGGAAATCATTTGGTCTTGATATCGATTCCATCTTTTCCGGCGATGATTACGGCGGTCGCCATGTCCAAGAAGAGTCCGTGCTCCACCACGCCTTCAAACGCTGAAATCTCTTTTCCGGCGGCTAATCCGTCTTTGATTGGAGTCTTGAAATATAAATCGACTATGTAATTTGAATTATCGGTGACGTATGGCTTCCCATCGGCGTCCAATCGGAGCTTGGCCTCGCAATCTTCGTCCTTGAATAGGTCTTGAAGCCTCACCAAATTGTATTTCCAGCAGAACTGAACGACTTCCACCGGCATCGCGAGACCGCTTCCGCCGAGGCCGTCAACTAATTTAGTATCATCGACGACGACGACGAACTTATCGGAAGCAGCCTCAACCATTTTCTCACGCAACAAAGCGCCGCCGCGGCCTTTAACGAGATTCAGATCTGGATCGACCTCATCAGCGCCATCGATAGCCAAATCGAGATGCGGATGATCATCAAGAACAGAGAGAGGAATTCCTAATGCCTTAGCTTGCTCCTCCGTCCGCTTGGAGGTAGGGATTCCAACAATGTCACTCAATTGATTACTCTTGAGAAGTTCGCCAATCTTAGCGACAACGAAAGCGGCGGTGGAGCCAGTGCCGAGGCCGAGAACCATTCCACTCTTGACATACTCAACAGCCTTGTCGGCAGCAAGCTTCTTGAGGTCGTCTTGAGTGAGAGTGGAGACGGAGCGGGCTTGAACGGAGAGAGGACGGCAGCGGTGCTGGTTATTGGCGGAAAGATTAAGAGGCTTTGGTGATCGGAGAAGAAGGTTGGCTATGGAGGAAACATGGCGGGAGGAAGAGAGAGAAGGAGGAGAGATGAGAGAGAGGGAAGCCATGGATGAGAAAGGGATAGGGTTTTGAGTTTCTAGTGGCTAATGTCTCTGCATTTTCTTCCTTTTATA ATGCGAGTGCGATTCCGGCTGGAAGCGTACTCGCGACTCCGACGACGATCTCACTTTTCTTCCTTGCGTTCTCTCGACTATGGCTGCCAGTCGGCGCCGCCGCCGGTACCAGATAAGCCAGTTCCGAGGAACTCCTCCTTCTTCAATCCTTGCTATTGGGCCTATTGTGGAGAAGGCACGTGTGAGAAGAACAATACGTATGCACACACGTGTGAATGCAGATCTGGCTTCTACAATCTCCTCAACATTTCTGCCTTCCCTTGCTATAGTACGATCGGGTCGGATTGTGCAAAACTTGGGATTAAAGTTGCTAATGTAAATTCAAGCGATAATGGAAGTGGGGGTTCTGGTACCGGACAAGGAAACTCCCTTCTACCAGGAAAGTTTGGGTGGGTGGCTATGGCAATTTTATTTGGCATGACTATGGAGCTTTGGAACTAGCAGATCCTTGATTATATATATAAAATTGATATTCATTTATGTTGTTTACACTATGTTTTGGTTTCATATCGATTGTTATTATATGTTGTGTCTGAGTTTGGTACATTATCATATATATAATAAATAAATCATAGCTCTAGTCATTAGAGGCTGCTGATCACTGTTTTTGTACATATATTCATCTTACTATATTATTTCTACAATTTGCACAAGATATATCCCATCCCAAATATTCATCTTGGTACAATTTACAAATATATCCCATCCCAGATTGAGCAGATCATCAGCAAAAATTTGCACAAGATTTCTTATAATACAGAGATGAAATCAAGCTGACTATCACCAAGAAATCATGAACAAAAATGGAAAAGTTTCGATTCAAATCTCTAATATACGGATTAGAAGAAAGTAAAAGGAATCGAACGAACAGTTTTTAGCAGAACTCACCAATGGAAGGTAATGGAAACGGAAATCATTTGGTCTTGATATCGATTCCATCTTTTCCGGCGATGATTACGGCGGTCGCCATGTCCAAGAAGAGTCCGTGCTCCACCACGCCTTCAAACGCTGAAATCTCTTTTCCGGCGGCTAATCCGTCTTTGATTGGAGTCTTGAAATATAAATCGACTATGTAATTTGAATTATCGGTGACGTATGGCTTCCCATCGGCGTCCAATCGGAGCTTGGCCTCGCAATCTTCGTCCTTGAATAGGTCTTGAAGCCTCACCAAATTGTATTTCCAGCAGAACTGAACGACTTCCACCGGCATCGCGAGACCGCTTCCGCCGAGGCCGTCAACTAATTTAGTATCATCGACGACGACGACGAACTTATCGGAAGCAGCCTCAACCATTTTCTCACGCAACAAAGCGCCGCCGCGGCCTTTAACGAGATTCAGATCTGGATCGACCTCATCAGCGCCATCGATAGCCAAATCGAGATGCGGATGATCATCAAGAACAGAGAGAGGAATTCCTAATGCCTTAGCTTGCTCCTCCGTCCGCTTGGAGGTAGGGATTCCAACAATGTCACTCAATTGATTACTCTTGAGAAGTTCGCCAATCTTAGCGACAACGAAAGCGGCGGTGGAGCCAGTGCCGAGGCCGAGAACCATTCCACTCTTGACATACTCAACAGCCTTGTCGGCAGCAAGCTTCTTGAGGTCGTCTTGAGTGAGAGTGGAGACGGAGCGGGCTTGAACGGAGAGAGGACGGCAGCGGTGCTGGTTATTGGCGGAAAGATTAAGAGGCTTTGGTGATCGGAGAAGAAGGTTGGCTATGGAGGAAACATGGCGGGAGGAAGAGAGAGAAGGAGGAGAGATGAGAGAGAGGGAAGCCATGGATGAGAAAGGGATAGGGTTTTGAGTTTCTAGTGGCTAATGTCTCTGCATTTTCTTCCTTTTATA ATGCGAGTGCGATTCCGGCTGGAAGCGTACTCGCGACTCCGACGACGATCTCACTTTTCTTCCTTGCGTTCTCTCGACTATGGCTGCCAGTCGGCGCCGCCGCCGGTACCAGATAAGCCAGTTCCGAGGAACTCCTCCTTCTTCAATCCTTGCTATTGGGCCTATTGTGGAGAAGGCACGTGTGAGAAGAACAATACGTATGCACACACGTGTGAATGCAGATCTGGCTTCTACAATCTCCTCAACATTTCTGCCTTCCCTTGCTATAGTACGATCGGGTCGGATTGTGCAAAACTTGGGATTAAAGTTGCTAATGTAAATTCAAGCGATAATGGAAGTGGGGGTTCTGGTACCGGACAAGGAAACTCCCTTCTACCAGGAAAGTTTGGGTGGGTGGCTATGGCAATTTTATTTGGCATGACTATGGAGCTTTGGAACTAG MRVRFRLEAYSRLRRRSHFSSLRSLDYGCQSAPPPVPDKPVPRNSSFFNPCYWAYCGEGTCEKNNTYAHTCECRSGFYNLLNISAFPCYSTIGSDCAKLGIKVANVNSSDNGSGGSGTGQGNSLLPGKFGWVAMAILFGMTMELWN Homology
BLAST of Carg17589 vs. NCBI nr
Match: KAG7021150.1 (hypothetical protein SDJN02_17838, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 308.9 bits (790), Expect = 2.3e-80 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of Carg17589 vs. NCBI nr
Match: XP_022937685.1 (uncharacterized protein LOC111444015 [Cucurbita moschata]) HSP 1 Score: 262.7 bits (670), Expect = 1.9e-66 Identity = 123/125 (98.40%), Postives = 123/125 (98.40%), Query Frame = 0
BLAST of Carg17589 vs. NCBI nr
Match: XP_023521139.1 (uncharacterized protein LOC111784759 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 260.4 bits (664), Expect = 9.4e-66 Identity = 122/125 (97.60%), Postives = 122/125 (97.60%), Query Frame = 0
BLAST of Carg17589 vs. NCBI nr
Match: XP_022965938.1 (uncharacterized protein LOC111465666 [Cucurbita maxima]) HSP 1 Score: 260.4 bits (664), Expect = 9.4e-66 Identity = 121/125 (96.80%), Postives = 122/125 (97.60%), Query Frame = 0
BLAST of Carg17589 vs. NCBI nr
Match: XP_023537938.1 (uncharacterized protein LOC111798832 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 260.4 bits (664), Expect = 9.4e-66 Identity = 122/125 (97.60%), Postives = 122/125 (97.60%), Query Frame = 0
BLAST of Carg17589 vs. ExPASy TrEMBL
Match: A0A6J1FHH1 (uncharacterized protein LOC111444015 OS=Cucurbita moschata OX=3662 GN=LOC111444015 PE=4 SV=1) HSP 1 Score: 262.7 bits (670), Expect = 9.2e-67 Identity = 123/125 (98.40%), Postives = 123/125 (98.40%), Query Frame = 0
BLAST of Carg17589 vs. ExPASy TrEMBL
Match: A0A6J1HQE9 (uncharacterized protein LOC111465666 OS=Cucurbita maxima OX=3661 GN=LOC111465666 PE=4 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 4.6e-66 Identity = 121/125 (96.80%), Postives = 122/125 (97.60%), Query Frame = 0
BLAST of Carg17589 vs. ExPASy TrEMBL
Match: A0A0A0LLE2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G011540 PE=4 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 3.1e-54 Identity = 101/126 (80.16%), Postives = 112/126 (88.89%), Query Frame = 0
BLAST of Carg17589 vs. ExPASy TrEMBL
Match: A0A6J1CPY4 (uncharacterized protein LOC111013088 OS=Momordica charantia OX=3673 GN=LOC111013088 PE=4 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 3.5e-50 Identity = 98/125 (78.40%), Postives = 106/125 (84.80%), Query Frame = 0
BLAST of Carg17589 vs. ExPASy TrEMBL
Match: A0A5A7VDL6 (MtN26 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001320 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 2.5e-40 Identity = 78/101 (77.23%), Postives = 86/101 (85.15%), Query Frame = 0
BLAST of Carg17589 vs. TAIR 10
Match: AT4G14746.1 (CONTAINS InterPro DOMAIN/s: EGF-like (InterPro:IPR006210); Has 259 Blast hits to 234 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). ) HSP 1 Score: 83.2 bits (204), Expect = 1.9e-16 Identity = 42/118 (35.59%), Postives = 63/118 (53.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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