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Carg17581 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTTTTTATCATCCCGACTCAGGTTAAGAGCTGCCGTTTCTCTGCGCCTTCGCCCTTCCAAGAGCTTCAAGCTTTCCATCCTCTTCGGGGCACATTCAGTCATGGCGGACAAGGCAGTCACTATCCGGACCAGGAAGTTCATGACCAACAGGCTCCTCTCCAGGAAGCAATTCGTAAGTTTCTCAGATCGCACACCTTCGTTCTTGCTTTCCGCATTCCTGTTCTTTGAGGCCTTGATGTTGTGTGATCCCGTGGCGTTTGATTCTTGTGTGGCGATGTTAACTTGTTTTTTTTTTTCGTTTTTGGTTTTTGAGTTTGGAGTTTGTTAATTCGTAGATTCTGGTGTTGTACTGAAGTGGATGACTTGCATTTGTTTGACGCTGTAAAGGGTTCTCTTATGTTTAATCGAAAACCAATGTCTTAAATGAATCTGAAGTTTTTCGTTTCTCTATTACTTGGAGCTTAGGGTATTTAGTGCTTGCCACTTTGACGACCGTGGTTGCTTTAGGGCTGGTGATTTTTGTTCCTTGGTAGCTCACAGACTCCTGTTTGTTTAATATTTTGATGGGGGTTGGAAGAGATTTTGAAGTCGTTTATAACCTGTTTGTCCCATGTTTATTTCAGGTCATTGATGTTCTTCACCCAGGCAGACCTAATGTCTCAAAGGTAAATCCATTTTCGATTCAATTTCCTTATTCTTCTTGGTTGAATTTATGTCATTTTACTTCAGTAATTGTCTTTCATATGTGCAAACTTCTTTAGAATACAACATGAATCTCATCGATTATTTCCATCGGGTACTTCTTCTTGTCTTGAACATTATAACTAATACTAATTTTTATACACTCGTTTCTTACTTCATGCTCCTTTTGGTAATTTTCGAAGTTTCATTGAAATGGTGACTGACATCTAAACTTTTCTGTAAAGCTTATGAAATTAAGGCCGTATTGTTCTGGCATTCATGACGCTTAATTCTTTTGCATTTTGGCATATTTTGCTCATCATGTGATGTGTTTCTATATCTCGCTCTAAAGGCTGAGCTAAAGGAGAAGTTGGGCAGAATCTACGACGTGAAAGACCCAAATGCCATCTTTGTTTTCAAGTTCAGAACTCACTTTGGTGGTGGAAAATCTACCGGGTTCGGTTTGATCTATGACTCTGTTGAGAATGCCAAGAAGTATGAGCCAAAGTACAGGCTGATCAGGGTAATTTACATTCTCCCTCTAAACCAAAATTCAATAATCAAACTGGACATTACTCAAACTCAACCGTTTTTCTCGTTTCAGAATGGACTCGACACCAAGGTAGAGAAGTCAAGAAAGCAAATGAAGGAAAGGAAGAACAGGGCCAAGAAAATCCGTGGAGTTAAGAAGGTAAGTAAAAACATTCATAGCTAGTCGACGAGATCTCGAATGATGAAACATTACTATTTACCACTGGTTGATGTCTTTTTAACAGACCAAGGCTTCAGATGCTGCCAAGGCAGGAAAGAAGAAATGAGGATGCTGGAGTTTTGTTCTTATCACCAAGGATCGTCTGCAGAATTGGGTTGCTTTCTTTTTAATAGTCTCTTTTAGTTTTCGTTTTATTACTCCTAAATGAAGTTATTATGTTAATCAGTGATTTGGTTGTTGGTGACTAGTGATATCAAAACTTGTTCAACATTTTTGACGTTACAGTTAATATATTTCCTTGTTTTTCC TCTTTTTATCATCCCGACTCAGGTTAAGAGCTGCCGTTTCTCTGCGCCTTCGCCCTTCCAAGAGCTTCAAGCTTTCCATCCTCTTCGGGGCACATTCAGTCATGGCGGACAAGGCAGTCACTATCCGGACCAGGAAGTTCATGACCAACAGGCTCCTCTCCAGGAAGCAATTCGTCATTGATGTTCTTCACCCAGGCAGACCTAATGTCTCAAAGGCTGAGCTAAAGGAGAAGTTGGGCAGAATCTACGACGTGAAAGACCCAAATGCCATCTTTGTTTTCAAGTTCAGAACTCACTTTGGTGGTGGAAAATCTACCGGGTTCGGTTTGATCTATGACTCTGTTGAGAATGCCAAGAAGTATGAGCCAAAGTACAGGCTGATCAGGAATGGACTCGACACCAAGGTAGAGAAGTCAAGAAAGCAAATGAAGGAAAGGAAGAACAGGGCCAAGAAAATCCGTGGAGTTAAGAAGACCAAGGCTTCAGATGCTGCCAAGGCAGGAAAGAAGAAATGAGGATGCTGGAGTTTTGTTCTTATCACCAAGGATCGTCTGCAGAATTGGGTTGCTTTCTTTTTAATAGTCTCTTTTAGTTTTCGTTTTATTACTCCTAAATGAAGTTATTATGTTAATCAGTGATTTGGTTGTTGGTGACTAGTGATATCAAAACTTGTTCAACATTTTTGACGTTACAGTTAATATATTTCCTTGTTTTTCC ATGGCGGACAAGGCAGTCACTATCCGGACCAGGAAGTTCATGACCAACAGGCTCCTCTCCAGGAAGCAATTCGTCATTGATGTTCTTCACCCAGGCAGACCTAATGTCTCAAAGGCTGAGCTAAAGGAGAAGTTGGGCAGAATCTACGACGTGAAAGACCCAAATGCCATCTTTGTTTTCAAGTTCAGAACTCACTTTGGTGGTGGAAAATCTACCGGGTTCGGTTTGATCTATGACTCTGTTGAGAATGCCAAGAAGTATGAGCCAAAGTACAGGCTGATCAGGAATGGACTCGACACCAAGGTAGAGAAGTCAAGAAAGCAAATGAAGGAAAGGAAGAACAGGGCCAAGAAAATCCGTGGAGTTAAGAAGACCAAGGCTTCAGATGCTGCCAAGGCAGGAAAGAAGAAATGA MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK Homology
BLAST of Carg17581 vs. NCBI nr
Match: XP_022937688.1 (40S ribosomal protein S24-1-like [Cucurbita moschata] >XP_022966001.1 40S ribosomal protein S24-1 [Cucurbita maxima] >XP_023536700.1 40S ribosomal protein S24-1-like [Cucurbita pepo subsp. pepo] >KAG6586294.1 40S ribosomal protein S24-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021142.1 40S ribosomal protein S24-2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 261.5 bits (667), Expect = 4.0e-66 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0
BLAST of Carg17581 vs. NCBI nr
Match: XP_004139219.1 (40S ribosomal protein S24-1 [Cucumis sativus] >KGN60830.1 hypothetical protein Csa_019211 [Cucumis sativus]) HSP 1 Score: 260.0 bits (663), Expect = 1.2e-65 Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 0
BLAST of Carg17581 vs. NCBI nr
Match: XP_022143165.1 (40S ribosomal protein S24-1 [Momordica charantia]) HSP 1 Score: 259.2 bits (661), Expect = 2.0e-65 Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 0
BLAST of Carg17581 vs. NCBI nr
Match: XP_022999263.1 (40S ribosomal protein S24-1-like [Cucurbita maxima]) HSP 1 Score: 259.2 bits (661), Expect = 2.0e-65 Identity = 135/137 (98.54%), Postives = 137/137 (100.00%), Query Frame = 0
BLAST of Carg17581 vs. NCBI nr
Match: XP_008455742.1 (PREDICTED: 40S ribosomal protein S24-1 [Cucumis melo] >XP_038889626.1 40S ribosomal protein S24-1 [Benincasa hispida] >ADN33912.1 40S ribosomal protein s24 [Cucumis melo subsp. melo] >KAA0063627.1 40S ribosomal protein S24-1 [Cucumis melo var. makuwa] >TYK18399.1 40S ribosomal protein S24-1 [Cucumis melo var. makuwa]) HSP 1 Score: 258.8 bits (660), Expect = 2.6e-65 Identity = 135/137 (98.54%), Postives = 136/137 (99.27%), Query Frame = 0
BLAST of Carg17581 vs. ExPASy Swiss-Prot
Match: Q9SS17 (40S ribosomal protein S24-1 OS=Arabidopsis thaliana OX=3702 GN=RPS24A PE=2 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 2.0e-60 Identity = 119/132 (90.15%), Postives = 128/132 (96.97%), Query Frame = 0
BLAST of Carg17581 vs. ExPASy Swiss-Prot
Match: Q8LC83 (40S ribosomal protein S24-2 OS=Arabidopsis thaliana OX=3702 GN=RPS24B PE=2 SV=2) HSP 1 Score: 227.3 bits (578), Expect = 1.1e-58 Identity = 115/132 (87.12%), Postives = 125/132 (94.70%), Query Frame = 0
BLAST of Carg17581 vs. ExPASy Swiss-Prot
Match: Q962Q6 (40S ribosomal protein S24 OS=Spodoptera frugiperda OX=7108 GN=RpS24 PE=2 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 3.3e-39 Identity = 84/132 (63.64%), Postives = 104/132 (78.79%), Query Frame = 0
BLAST of Carg17581 vs. ExPASy Swiss-Prot
Match: Q56JU9 (40S ribosomal protein S24 OS=Bos taurus OX=9913 GN=RPS24 PE=2 SV=2) HSP 1 Score: 156.0 bits (393), Expect = 3.1e-37 Identity = 86/132 (65.15%), Postives = 100/132 (75.76%), Query Frame = 0
BLAST of Carg17581 vs. ExPASy Swiss-Prot
Match: Q5RAQ8 (40S ribosomal protein S24 OS=Pongo abelii OX=9601 GN=RPS24 PE=2 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 3.1e-37 Identity = 86/132 (65.15%), Postives = 100/132 (75.76%), Query Frame = 0
BLAST of Carg17581 vs. ExPASy TrEMBL
Match: A0A6J1HN66 (40S ribosomal protein S24 OS=Cucurbita maxima OX=3661 GN=LOC111465719 PE=3 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 1.9e-66 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0
BLAST of Carg17581 vs. ExPASy TrEMBL
Match: A0A6J1FGN1 (40S ribosomal protein S24 OS=Cucurbita moschata OX=3662 GN=LOC111444017 PE=3 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 1.9e-66 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0
BLAST of Carg17581 vs. ExPASy TrEMBL
Match: A0A0A0LFK1 (40S ribosomal protein S24 OS=Cucumis sativus OX=3659 GN=Csa_2G012120 PE=3 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 5.6e-66 Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 0
BLAST of Carg17581 vs. ExPASy TrEMBL
Match: A0A6J1KJ42 (40S ribosomal protein S24 OS=Cucurbita maxima OX=3661 GN=LOC111493687 PE=3 SV=1) HSP 1 Score: 259.2 bits (661), Expect = 9.5e-66 Identity = 135/137 (98.54%), Postives = 137/137 (100.00%), Query Frame = 0
BLAST of Carg17581 vs. ExPASy TrEMBL
Match: A0A6J1CN14 (40S ribosomal protein S24 OS=Momordica charantia OX=3673 GN=LOC111013098 PE=3 SV=1) HSP 1 Score: 259.2 bits (661), Expect = 9.5e-66 Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 0
BLAST of Carg17581 vs. TAIR 10
Match: AT3G04920.1 (Ribosomal protein S24e family protein ) HSP 1 Score: 233.0 bits (593), Expect = 1.4e-61 Identity = 119/132 (90.15%), Postives = 128/132 (96.97%), Query Frame = 0
BLAST of Carg17581 vs. TAIR 10
Match: AT5G28060.1 (Ribosomal protein S24e family protein ) HSP 1 Score: 227.3 bits (578), Expect = 7.7e-60 Identity = 115/132 (87.12%), Postives = 125/132 (94.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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