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Carg17553 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATTCATCGATTCTCTCGAGAGGTCACAATTACCGCAACCTTTTCTCCAGGTTCGAAATAATCCTTTGTTCCACTGTCTGGGTCTATTTACAACTAGCCAATTAAGAATTCTCATATGTACGAGTACTAGCAAGTGCATCTTTGATGCAGTCCTCGATTCTCCCAAAAGGTTACAATTACAAAGAGCAAACATATTAATGGCGAGTTACACATTTTTGCTATTCTACTAATACATGTACTTGCTCTACTATTCCGTTGAAGCCTGCCTAAGGAAGTCATCTTTCTAGGCAAATTCATCAAAGAAATCAAAGAAATATAAAGTGTGAATAAAGTCGGTCAAACTTACGATTCTTTTCATAATGATGAATGGCCTTCTTTTTCATGTCTTCTGTGATGTCCCACGTTGGTTGGAGAGGAGAACAAACCACCATTTATAAGGGTGTAGAAACCTTCCCCTAGCAGACGTGTTTTGAAGCCTTGAAGGGAAGCCCGAAAGGGAAAGTCCAAAGAGGACAATATCTGCTAGCAATGGATCTGAGGCATTACAAATGGTATCAGAGCCAGACACTGGACAATGTGCCAGCCTTCTCGCTGTTCCCCAAAGGGGGTAGACACAAGCTAGCGGTGGATCTGGGGCGTTACAAATGGTATCGAGCCAGACACTGGACAATGTGTCAGCCTTTTCGCTGTTCCCTGAAGGGGGTAGACACAAGGCGGTGTGCCAGTAAAGACGCTGGCCCCAAAGAGGGGTGGATTTAGGGGCAGTCCCACATCGATTGGAGGAAGGAAAGAGTGCCAGCGAGGACGCTGGGCCCCGAAGGGGGGTGGATTTTGATGTCCCACATTGGTTGGGGAGGAGAACAAACCACCATTTATAAGGGTGTGGAAACCTTCCCCTAGCAGACGTGTTTTAAAGCCTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAGGACAATACCTGCTAGCAGTGGATCTAGGGCGTTACAAATGGTATCAGAGCAAAACACTGGACAATGTGCCAGCCTTCTCGCTGTTCCCCGAAGGTGGGTAGACACGAGGTGGTGTGCCAGTAAAGACGCTGGGTCTCGAAGGGGGGTGGTGGGGAGGAGAACAAACCACCATTTATAAGGGTGTGGAAACCTTCCCCTAGCAGACGCGTTTTAAAGCCTTAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGATCTGGGGCGTTACACATCTTTAATACAGTGAAACTTCAATACCTGTCTACCTGCAGTTGATTTAGAAGAGCTTTTCAAAGGCTTTAACATCTACAAAAACTCACAAAGCCAGTTGTATCTCAACAAAAACTCCAAAGCACAATGTATAGCAGAACAAATCGCGAAGAAATTGTACAACCAACTGCCTTGCAGTCGAACCATCGACGGTGACGCCCTTTTGCCATCGAACCAAAGCCAACTTCCATTGTTCACTCATTACTCAAGAAAGTGCCAAGTTAACCTCAATCATACACTAGACGCTGTTATTTTACCCATATACGTGCCTAACTCAGAAGCTGAGCTTGTGCTTGCTGGCTGCAAACATTCTCATGCTTCAAAGTACTTGGGTAATGCAACTTATACAAGGGTAGGCCTTGCAAAAAATAAAGATTGTTTGGTGATTGCTTTGGGTACTGATGCACTTGGTGGAAGCTATTCTGCTGGTGTCTCTCGGATTCAAAATATCGGTCGGGTTTATTTCTTGGGATTTATTGTTTTCGGGGTCATTTCTTTGTTTTGGTGAGGATCAATAGGGCTTGTTTCCTTTCGTCTCCTACATGTTACGATTTACGTTCAATGAACGTCTCAATGAGTCATGTAATGCAGTACACCTTCACTTTATCCAATATGGAACAGCTTGAAGAATTTATTTCTTTATCTTTTTCCTTTCTATTCTATAACTGTACATCATTCGGTCAACTTACTAAATAGCCCAAGCCTACCGCTAGCAGATATTGTTCTCTTTGGGTTTTCCCTTTCGAGTTTTCCCTCAAGGTTTTAAAACATGTATGCTAAGGAGAGGTTTCCACACCCTTATAAGTAATGCTTTGTTCACCTCTCCAACCGAGGTGGATCTCACAATCCACCCCCTAGAGGGCCCAACGTCCTCCCTGGCACACCGTCTAGTGTTTGGCTCTGATACCATTTGTAATAGTCCAACCCCACCGCTAGTAGATATTGTCCTCTTTGGACTTTCCCTTTCGAGTTTTCCCTCAAGGTTTTAAAACATGTCTGCTAGGAAGAGATTTCCACACCCTTATAAGTAATGCTTCATTCACCTCTCCAACCGATGTGGATCTCACAATCCCCCCTAGAGGGCCCAACGTCCTCCCTGGCACACCGTCCAGTGTTTGGCTCTGATACCATTTGTAATAGTCCAACCCAACTGCTAGTAGATATTATCCTCTTTGGGTTTTCCCTTTCGGGCTTCCCCTCAAAGTTTTAAAACGTGTCTGCTAGGGAGAAGTTTCCATACACTTATAAGGAATGTTTCGTTCCCCTCTCCAGCAGCCTAATAGGATCTGCTTTAAATCCCAAGAAAAACATCTTATGATAGAAAGCTGAACCAGTGCCCATATCGAGGAAGGAAGTAAAAAGTGAAAAAGTAAACAAAAGAAGAAACCCCAACTTCAGAAAAGAACCTGCTGAGCAGCCAAAGGGAAATAAATAAAACACATGGAAGGAAACACATGAAGAATCCTCCGGTACGATCATAAAACGATACTTTAACGAAGCTTAGATACCGATAATCCCCCAAAGAAACAACCAGGAAGATCAAAATCATCAAAAGGTAACGAAATCCGAAGCTAAAATATGAATGCCTATTGATAGAAATCAGAACTACAACATGTTTTGCTTGCTTGTGAATTGTGCATCACCTAAACTGTTTGGAATATTGTGCATAGAATAAATGAAAATGAAACATGTTGAGAAAAAGAAACTCAACACCCTTCCTTAATCAAATGAGCAAGAATATATCCTAGCAGGTCCACATCTACCCAGTTCTTTGGTAGACGAACACGACTCTCCACAATGGTACGATATTGTCCACTTTGAGCATAAACTCTCATGACTTTGCTTTGGGCTTCTCCAAAACGCCTCAAACCAATGGAGAGAGTATTCCTCACTTATAAACCCATGATCATTTCCTAAATTAGCCAATGTGGGACTTTCATCCAACACCTCCCCTCGAACAAAGAACGCCTCCCCTTAATCGAAGCTCGACTCCTTTTCTTTTGGAGTCATTTGTTCGACATTTGAGGATTCTATTGACATGACTAAGTTTAGGACATGACTCTAATACCATGTTAGATGAACACGATTCTCCACAATGGTATGATATTATCCATTTTGAGCATAAGCTCTCGTGGCTTTACTTCGGGCTTCCCCACAACGCCTCAAACCAATGGAGAGAGTATTCTTTATTTATAAACCCATGATCATTCCCTAAATTAGCTGATGTGGGACTTTCATCATCCAACATTCATAACACAGCTGTAGAGAATAGTTCAGAAATGTCTTTGCAATTCCAAATCTTGAGACAATTTTAGAACTGAGGTAGGTGGGATTTCATACCTATACGCCTTTACAGGAATGACTAATGAACACATAAAGTGTAATATGGAAAGCTTATACCCTTCACGAATAAAGCAAAGCAATATTGCTAGAACAAGCAAATTCTAAAGAGATCAGAATGGAAGAACCCAAAAAAAACGATAAAAAGAGACAAGAACCTCGTATTCTTTGTCCAAGCAAGCCTGATGCCTTCTCCTTGACCCTCCTGCAGCTGCATAATGGCCTTGCTCTCCCACAAACTTGGCTTCTTCCTCTACAGTGTTGCCCGTGGCTTGCTGCTATTGTCGTGCTCAGTACATGGCGATGGACCTAG ATGCATTCATCGATTCTCTCGAGAGGTCACAATTACCGCAACCTTTTCTCCAGTCGAACCATCGACGGTGACGCCCTTTTGCCATCGAACCAAAGCCAACTTCCATTGTTCACTCATTACTCAAGAAAGTGCCAAGTTAACCTCAATCATACACTAGACGCTGTTATTTTACCCATATACGTGCCTAACTCAGAAGCTGAGCTTGTGCTTGCTGGCTGCAAACATTCTCATGCTTCAAAGTACTTGGGTAATGCAACTTATACAAGGGTAGGCCTTGCAAAAAATAAAGATTGTTTGGTGATTGCTTTGGGTACTGATGCACTTGGTGGAAGCTATTCTGCTGGTGTCTCTCGGATTCAAAATATCGGTCGGCTGCATAATGGCCTTGCTCTCCCACAAACTTGGCTTCTTCCTCTACAGTGTTGCCCGTGGCTTGCTGCTATTGTCGTGCTCAGTACATGGCGATGGACCTAG ATGCATTCATCGATTCTCTCGAGAGGTCACAATTACCGCAACCTTTTCTCCAGTCGAACCATCGACGGTGACGCCCTTTTGCCATCGAACCAAAGCCAACTTCCATTGTTCACTCATTACTCAAGAAAGTGCCAAGTTAACCTCAATCATACACTAGACGCTGTTATTTTACCCATATACGTGCCTAACTCAGAAGCTGAGCTTGTGCTTGCTGGCTGCAAACATTCTCATGCTTCAAAGTACTTGGGTAATGCAACTTATACAAGGGTAGGCCTTGCAAAAAATAAAGATTGTTTGGTGATTGCTTTGGGTACTGATGCACTTGGTGGAAGCTATTCTGCTGGTGTCTCTCGGATTCAAAATATCGGTCGGCTGCATAATGGCCTTGCTCTCCCACAAACTTGGCTTCTTCCTCTACAGTGTTGCCCGTGGCTTGCTGCTATTGTCGTGCTCAGTACATGGCGATGGACCTAG MHSSILSRGHNYRNLFSSRTIDGDALLPSNQSQLPLFTHYSRKCQVNLNHTLDAVILPIYVPNSEAELVLAGCKHSHASKYLGNATYTRVGLAKNKDCLVIALGTDALGGSYSAGVSRIQNIGRLHNGLALPQTWLLPLQCCPWLAAIVVLSTWRWT Homology
BLAST of Carg17553 vs. NCBI nr
Match: KAG7021115.1 (putative GPI-anchored protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 325.9 bits (834), Expect = 2.0e-85 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0
BLAST of Carg17553 vs. NCBI nr
Match: XP_022938135.1 (uncharacterized GPI-anchored protein At3g06035-like [Cucurbita moschata] >XP_023537309.1 uncharacterized GPI-anchored protein At3g06035-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 218.0 bits (554), Expect = 5.8e-53 Identity = 107/115 (93.04%), Postives = 109/115 (94.78%), Query Frame = 0
BLAST of Carg17553 vs. NCBI nr
Match: XP_022965956.1 (uncharacterized GPI-anchored protein At3g06035-like [Cucurbita maxima] >XP_022965957.1 uncharacterized GPI-anchored protein At3g06035-like [Cucurbita maxima]) HSP 1 Score: 208.8 bits (530), Expect = 3.5e-50 Identity = 103/115 (89.57%), Postives = 107/115 (93.04%), Query Frame = 0
BLAST of Carg17553 vs. NCBI nr
Match: KGN60925.2 (hypothetical protein Csa_023463 [Cucumis sativus]) HSP 1 Score: 159.5 bits (402), Expect = 2.4e-35 Identity = 77/112 (68.75%), Postives = 90/112 (80.36%), Query Frame = 0
BLAST of Carg17553 vs. NCBI nr
Match: XP_008454795.1 (PREDICTED: uncharacterized GPI-anchored protein At3g06035-like isoform X1 [Cucumis melo]) HSP 1 Score: 159.1 bits (401), Expect = 3.2e-35 Identity = 76/108 (70.37%), Postives = 87/108 (80.56%), Query Frame = 0
BLAST of Carg17553 vs. ExPASy Swiss-Prot
Match: Q84MC0 (Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana OX=3702 GN=At3g06035 PE=2 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 3.1e-09 Identity = 34/109 (31.19%), Postives = 51/109 (46.79%), Query Frame = 0
BLAST of Carg17553 vs. ExPASy TrEMBL
Match: A0A6J1FIU6 (uncharacterized GPI-anchored protein At3g06035-like OS=Cucurbita moschata OX=3662 GN=LOC111444312 PE=4 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 2.8e-53 Identity = 107/115 (93.04%), Postives = 109/115 (94.78%), Query Frame = 0
BLAST of Carg17553 vs. ExPASy TrEMBL
Match: A0A6J1HN23 (uncharacterized GPI-anchored protein At3g06035-like OS=Cucurbita maxima OX=3661 GN=LOC111465680 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 1.7e-50 Identity = 103/115 (89.57%), Postives = 107/115 (93.04%), Query Frame = 0
BLAST of Carg17553 vs. ExPASy TrEMBL
Match: A0A0A0LGC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021640 PE=4 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 1.2e-35 Identity = 77/112 (68.75%), Postives = 90/112 (80.36%), Query Frame = 0
BLAST of Carg17553 vs. ExPASy TrEMBL
Match: A6YTC6 (GPI-anchored protein-like protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 1.5e-35 Identity = 76/108 (70.37%), Postives = 87/108 (80.56%), Query Frame = 0
BLAST of Carg17553 vs. ExPASy TrEMBL
Match: A0A1S3BZI4 (uncharacterized GPI-anchored protein At3g06035-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495110 PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 1.5e-35 Identity = 76/108 (70.37%), Postives = 87/108 (80.56%), Query Frame = 0
BLAST of Carg17553 vs. TAIR 10
Match: AT3G06035.1 (Glycoprotein membrane precursor GPI-anchored ) HSP 1 Score: 63.2 bits (152), Expect = 2.2e-10 Identity = 34/109 (31.19%), Postives = 51/109 (46.79%), Query Frame = 0
BLAST of Carg17553 vs. TAIR 10
Match: AT1G54860.1 (Glycoprotein membrane precursor GPI-anchored ) HSP 1 Score: 58.2 bits (139), Expect = 7.1e-09 Identity = 28/86 (32.56%), Postives = 48/86 (55.81%), Query Frame = 0
BLAST of Carg17553 vs. TAIR 10
Match: AT5G19240.1 (Glycoprotein membrane precursor GPI-anchored ) HSP 1 Score: 44.7 bits (104), Expect = 8.1e-05 Identity = 29/93 (31.18%), Postives = 46/93 (49.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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