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Carg17546 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGAGATTCGTGATTCCTAACAATTTGAAACCTTGAAAACTTGCGCTCGAATGGACCCAAATGGCATAAACTATTTGTCCTTGATGACTATGTCTGAAAGGAAAGAATAAAAATAGACTAAAGCTACTTTATTCATATTCCTAAGGTATGAACCGAACCAGAATCATGAGAAACTGCTGTCTACAGGCCAAAGTTATGAATAAACAGGTTTTGAAACCAACTTTTTCTTTCTCTGCTCATGAGGAACTGCCTATCTTTTCTGCTTGTGCAAGTCAAGAATGCTCAAGCAATGAACATTGAGAAGGTTATTCAAGAAGCTCTAAATTGTAAGCCTCGTTTTTTCTGATGCATTTCAGACATTATATGTCCTCTTTCTTCCCTATCTTTGCCCAAAACTGGCCTCCTCAGGGTCTTTGAGCCACTTTCATATGCAGTTTTCCTCTGATTTCCTTTGAGATCGCCCCCGCTTCGTTCTTCGAAGTACTGGAGAACTTGATTTCGATCATCTGGGTAAGATTTAGATTCTTTTCCTTGTGAGTTTTTGATGATTTCTGGTGGAATGAATGAATTGTTCATATGCTATTGCTTTAGAGTTCAATATCCTTAAACGAGGAGTTTTCTTGTCTGATACGGTTAGAATCCTTTAAATCTCTAAGAACACAACCCTGTCTGTGGGTCTGCACATTTCAGATTCAGAAACCAAATCAAACTTTTTTCCCCTTCTATTCTCTAAGAAATCTTTGAATCAATTGGTGGCGACGAGGCGTTTCGTTCATTTCCCTACAAAACGCTCTTGTTCTGCACCGAATGGCCAAAAACGATGCTGATCGTTTGTCATCTTCTTCCATATCTCTATAATTCAAGTTTCTAAACATGTTTTAGAAAAATATACAAGGCTTTACAACATAGCTTCTGAATCTGTAGGAAAATAATGTATATACCTTACAATAATCTATTTTATTATCAGATTTGGAAGGGACCCACCTGTATTATTAGATTGTTTTTTTAACATTCACCGGTGATTCTGTATGAATTAGAGTGATTAAGTTTGTTTTGTATTGTGCAGATCTTGATGAACATAAGAAAAATGGCAGACAGTGACAATGATTTTCTAGCAGAAACAGATTCACCTCTTGGACTGGTTGAACCTGGGAAGCCTATACCGAGCTCACCTCGAGTGTTGTCGATTCTTTCCTCTGTTTTCGAGAGGTCGATTCAGAAAAATGAAAAGTTATTGAAAAAACTCAAAACGAAAGACAACGTTACGGTTTTCCATGGTTCCCGAGCACCGACCATGGGCATTGGACAATATATTGATCGCATCTCGAAGTACACATGTTGTGGCACTCCTTGCTTAGTTGTTGCCTACATATACATTGAAAGATATCTTCAAAAGATGGATGCTTACCTTACTTCGTTGAACGCCCACCGCCTTCTTATCACCAGCATCATGGTTGCAGCGAAGTTTAATGATGCCGGGTAAGTTTCAATATCACTTAGTTAACTTTGTAATTTGCTCGAGATGACAAGATTTTGAGCTCTGCTAATATTCGTCTTTGTTGGCTTATCATTCATCCATTAACTTGAGATCATATGAAGAGGAATCCATAGTTTCATGATTTATATGAATAGTTGACACTTTTTATAGTGAAAATAGGATGAACATATGATTTAGTTCCTGATATTTGGTCATTCTTCAATTTTGTCCCATATCTTTCAAAAGTTAGTTTGTTTTTGTCGAAAATATCCTATATTTAATATGATGGAACCGACATTTGAAAATGTACCCATGAATCAAAAACTTCATAAAGACCCTCACATGGCATACGTACACATTTTTCCTAGTATAGTGACATTCACGACATAGAATGAAGATATGCATCTAAGATATAATTGAAAATTTTAAAAGATTAGGTACGAAATATGAAAACGACTCAAAAAGTGCTTGCAAGATATCAATGCGCAGCTCAAACTAGAGTCATGCTGCTGAACCGATATCGAACATCTTATCTATGCATGCCCGAAAATTGCTTCGACGTTATAACACACAGCTTATTGTGCTATGCTGTGTGCAGGTGCCATAACAACACTTTCTTTGCCAAAGTAGGAGGAGTGAGCACAAAAGAAATGAACAGAATGGAGATCGAATTTCTGTCCAATTTGGACTTCAGACTTCATGTCACTGCAGATGCTTTCAGAGCTCATTGTTTGCAGCTCCAAAAGGAAGGTTTCGGGGAGAACCCGATCGATCATCGATCCAGTAACAAAACTCGAGCTAAATGTTTACCTCAAATTGCAGGCTATACTTGCAGAGCCGTTTAAACATTCGAAAGGAAATCTATCTTCCTTAGCTTTCATGGTTAGTTAGTGTTGAATCTAAGCTCCAATTTTAAACCAAACCCAGAAAGAAGAATGTTTCAACTAGGAAGAGGATGATAGTATTGTAGAGATTCAATGGAAAATGTTTATGATGAACTCGAAAATCTTATCATTTAACGATATGATTAATTTATTTGAGAATTTGGTTTTCTTTACGATACCTTTAAATGTCGGTATGTTGTTCGAGTTTCGGGAAAATCAGTAACTCAAAACCCGTGTTGTCTTTACGATACCTTTAAACTAAGTAGCCATATATGTTTTGCAGTCAAATTTATAAATGTCTAAAGAAGATTTAAATAGTTATGTTTCTGTTCTAGAATTTGCAAAAATGTTAAAATTAATTAAATTGAACCAAAATTGATAAAATCTATAAAAAT TGGAGATTCGTGATTCCTAACAATTTGAAACCTTGAAAACTTGCGCTCGAATGGACCCAAATGGCATAAACTATTTGTCCTTGATGACTATGTCTGAAAGGAAAGAATAAAAATAGACTAAAGCTACTTTATTCATATTCCTAAGGTATGAACCGAACCAGAATCATGAGAAACTGCTGTCTACAGGCCAAAGTTATGAATAAACAGGTTTTGAAACCAACTTTTTCTTTCTCTGCTCATGAGGAACTGCCTATCTTTTCTGCTTGTGCAAGTCAAGAATGCTCAAGCAATGAACATTGAGAAGGTTATTCAAGAAGCTCTAAATTGTAAGCCTCGTTTTTTCTGATGCATTTCAGACATTATATGTCCTCTTTCTTCCCTATCTTTGCCCAAAACTGGCCTCCTCAGGGTCTTTGAGCCACTTTCATATGCAGTTTTCCTCTGATTTCCTTTGAGATCGCCCCCGCTTCGTTCTTCGAAGTACTGGAGAACTTGATTTCGATCATCTGGATCTTGATGAACATAAGAAAAATGGCAGACAGTGACAATGATTTTCTAGCAGAAACAGATTCACCTCTTGGACTGGTTGAACCTGGGAAGCCTATACCGAGCTCACCTCGAGTGTTGTCGATTCTTTCCTCTGTTTTCGAGAGGTCGATTCAGAAAAATGAAAAGTTATTGAAAAAACTCAAAACGAAAGACAACGTTACGGTTTTCCATGGTTCCCGAGCACCGACCATGGGCATTGGACAATATATTGATCGCATCTCGAAGTACACATGTTGTGGCACTCCTTGCTTAGTTGTTGCCTACATATACATTGAAAGATATCTTCAAAAGATGGATGCTTACCTTACTTCGTTGAACGCCCACCGCCTTCTTATCACCAGCATCATGGTTGCAGCGAAGTTTAATGATGCCGGGTGCCATAACAACACTTTCTTTGCCAAAGTAGGAGGAGTGAGCACAAAAGAAATGAACAGAATGGAGATCGAATTTCTGTCCAATTTGGACTTCAGACTTCATGTCACTGCAGATGCTTTCAGAGCTCATTGTTTGCAGCTCCAAAAGGAAGGTTTCGGGGAGAACCCGATCGATCATCGATCCAGTAACAAAACTCGAGCTAAATGTTTACCTCAAATTGCAGGCTATACTTGCAGAGCCGTTTAAACATTCGAAAGGAAATCTATCTTCCTTAGCTTTCATGGTTAGTTAGTGTTGAATCTAAGCTCCAATTTTAAACCAAACCCAGAAAGAAGAATGTTTCAACTAGGAAGAGGATGATAGTATTGTAGAGATTCAATGGAAAATGTTTATGATGAACTCGAAAATCTTATCATTTAACGATATGATTAATTTATTTGAGAATTTGGTTTTCTTTACGATACCTTTAAATGTCGGTATGTTGTTCGAGTTTCGGGAAAATCAGTAACTCAAAACCCGTGTTGTCTTTACGATACCTTTAAACTAAGTAGCCATATATGTTTTGCAGTCAAATTTATAAATGTCTAAAGAAGATTTAAATAGTTATGTTTCTGTTCTAGAATTTGCAAAAATGTTAAAATTAATTAAATTGAACCAAAATTGATAAAATCTATAAAAAT ATGAACATAAGAAAAATGGCAGACAGTGACAATGATTTTCTAGCAGAAACAGATTCACCTCTTGGACTGGTTGAACCTGGGAAGCCTATACCGAGCTCACCTCGAGTGTTGTCGATTCTTTCCTCTGTTTTCGAGAGGTCGATTCAGAAAAATGAAAAGTTATTGAAAAAACTCAAAACGAAAGACAACGTTACGGTTTTCCATGGTTCCCGAGCACCGACCATGGGCATTGGACAATATATTGATCGCATCTCGAAGTACACATGTTGTGGCACTCCTTGCTTAGTTGTTGCCTACATATACATTGAAAGATATCTTCAAAAGATGGATGCTTACCTTACTTCGTTGAACGCCCACCGCCTTCTTATCACCAGCATCATGGTTGCAGCGAAGTTTAATGATGCCGGGTGCCATAACAACACTTTCTTTGCCAAAGTAGGAGGAGTGAGCACAAAAGAAATGAACAGAATGGAGATCGAATTTCTGTCCAATTTGGACTTCAGACTTCATGTCACTGCAGATGCTTTCAGAGCTCATTGTTTGCAGCTCCAAAAGGAAGGTTTCGGGGAGAACCCGATCGATCATCGATCCAGTAACAAAACTCGAGCTAAATGTTTACCTCAAATTGCAGGCTATACTTGCAGAGCCGTTTAA MNIRKMADSDNDFLAETDSPLGLVEPGKPIPSSPRVLSILSSVFERSIQKNEKLLKKLKTKDNVTVFHGSRAPTMGIGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMDAYLTSLNAHRLLITSIMVAAKFNDAGCHNNTFFAKVGGVSTKEMNRMEIEFLSNLDFRLHVTADAFRAHCLQLQKEGFGENPIDHRSSNKTRAKCLPQIAGYTCRAV Homology
BLAST of Carg17546 vs. NCBI nr
Match: KAG7021108.1 (Cyclin-P3-1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 441.4 bits (1134), Expect = 4.4e-120 Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0
BLAST of Carg17546 vs. NCBI nr
Match: KAG6586265.1 (Cyclin-P3-1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 438.0 bits (1125), Expect = 4.9e-119 Identity = 215/217 (99.08%), Postives = 215/217 (99.08%), Query Frame = 0
BLAST of Carg17546 vs. NCBI nr
Match: XP_023537049.1 (cyclin-P3-1-like [Cucurbita pepo subsp. pepo] >XP_023537050.1 cyclin-P3-1-like [Cucurbita pepo subsp. pepo] >XP_023537051.1 cyclin-P3-1-like [Cucurbita pepo subsp. pepo] >XP_023537052.1 cyclin-P3-1-like [Cucurbita pepo subsp. pepo] >XP_023537053.1 cyclin-P3-1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 425.2 bits (1092), Expect = 3.3e-115 Identity = 210/217 (96.77%), Postives = 211/217 (97.24%), Query Frame = 0
BLAST of Carg17546 vs. NCBI nr
Match: XP_022965918.1 (cyclin-P3-1-like [Cucurbita maxima] >XP_022965919.1 cyclin-P3-1-like [Cucurbita maxima] >XP_022965920.1 cyclin-P3-1-like [Cucurbita maxima] >XP_022965921.1 cyclin-P3-1-like [Cucurbita maxima] >XP_022965922.1 cyclin-P3-1-like [Cucurbita maxima] >XP_022965923.1 cyclin-P3-1-like [Cucurbita maxima] >XP_022965924.1 cyclin-P3-1-like [Cucurbita maxima] >XP_022965925.1 cyclin-P3-1-like [Cucurbita maxima]) HSP 1 Score: 424.5 bits (1090), Expect = 5.6e-115 Identity = 209/217 (96.31%), Postives = 211/217 (97.24%), Query Frame = 0
BLAST of Carg17546 vs. NCBI nr
Match: XP_022937500.1 (cyclin-P3-1-like [Cucurbita moschata] >XP_022937501.1 cyclin-P3-1-like [Cucurbita moschata] >XP_022937502.1 cyclin-P3-1-like [Cucurbita moschata] >XP_022937503.1 cyclin-P3-1-like [Cucurbita moschata] >XP_022937504.1 cyclin-P3-1-like [Cucurbita moschata] >XP_022937506.1 cyclin-P3-1-like [Cucurbita moschata] >XP_022937507.1 cyclin-P3-1-like [Cucurbita moschata]) HSP 1 Score: 423.3 bits (1087), Expect = 1.2e-114 Identity = 209/217 (96.31%), Postives = 209/217 (96.31%), Query Frame = 0
BLAST of Carg17546 vs. ExPASy Swiss-Prot
Match: Q75HV0 (Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 9.2e-44 Identity = 92/188 (48.94%), Postives = 125/188 (66.49%), Query Frame = 0
BLAST of Carg17546 vs. ExPASy Swiss-Prot
Match: Q8LB60 (Cyclin-U3-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU3-1 PE=1 SV=2) HSP 1 Score: 159.8 bits (403), Expect = 3.4e-38 Identity = 80/166 (48.19%), Postives = 107/166 (64.46%), Query Frame = 0
BLAST of Carg17546 vs. ExPASy Swiss-Prot
Match: Q9LJ45 (Cyclin-U1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU1-1 PE=1 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 2.5e-33 Identity = 73/157 (46.50%), Postives = 105/157 (66.88%), Query Frame = 0
BLAST of Carg17546 vs. ExPASy Swiss-Prot
Match: O80513 (Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 1.6e-32 Identity = 70/153 (45.75%), Postives = 100/153 (65.36%), Query Frame = 0
BLAST of Carg17546 vs. ExPASy Swiss-Prot
Match: Q9LY16 (Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 1.4e-31 Identity = 62/154 (40.26%), Postives = 102/154 (66.23%), Query Frame = 0
BLAST of Carg17546 vs. ExPASy TrEMBL
Match: A0A6J1HQ42 (cyclin-P3-1-like OS=Cucurbita maxima OX=3661 GN=LOC111465658 PE=3 SV=1) HSP 1 Score: 424.5 bits (1090), Expect = 2.7e-115 Identity = 209/217 (96.31%), Postives = 211/217 (97.24%), Query Frame = 0
BLAST of Carg17546 vs. ExPASy TrEMBL
Match: A0A6J1FBC9 (cyclin-P3-1-like OS=Cucurbita moschata OX=3662 GN=LOC111443893 PE=3 SV=1) HSP 1 Score: 423.3 bits (1087), Expect = 6.0e-115 Identity = 209/217 (96.31%), Postives = 209/217 (96.31%), Query Frame = 0
BLAST of Carg17546 vs. ExPASy TrEMBL
Match: A0A6J1G2L7 (Cyclin OS=Cucurbita moschata OX=3662 GN=LOC111450231 PE=3 SV=1) HSP 1 Score: 362.8 bits (930), Expect = 9.7e-97 Identity = 179/215 (83.26%), Postives = 188/215 (87.44%), Query Frame = 0
BLAST of Carg17546 vs. ExPASy TrEMBL
Match: A0A6J1KJ49 (Cyclin OS=Cucurbita maxima OX=3661 GN=LOC111493690 PE=3 SV=1) HSP 1 Score: 356.7 bits (914), Expect = 6.9e-95 Identity = 177/215 (82.33%), Postives = 187/215 (86.98%), Query Frame = 0
BLAST of Carg17546 vs. ExPASy TrEMBL
Match: A0A1S3C004 (cyclin-P3-1 OS=Cucumis melo OX=3656 GN=LOC103495057 PE=3 SV=1) HSP 1 Score: 342.8 bits (878), Expect = 1.0e-90 Identity = 170/216 (78.70%), Postives = 184/216 (85.19%), Query Frame = 0
BLAST of Carg17546 vs. TAIR 10
Match: AT3G05327.1 (Cyclin family protein ) HSP 1 Score: 174.1 bits (440), Expect = 1.2e-43 Identity = 89/174 (51.15%), Postives = 121/174 (69.54%), Query Frame = 0
BLAST of Carg17546 vs. TAIR 10
Match: AT3G63120.1 (cyclin p1;1 ) HSP 1 Score: 159.8 bits (403), Expect = 2.4e-39 Identity = 80/166 (48.19%), Postives = 107/166 (64.46%), Query Frame = 0
BLAST of Carg17546 vs. TAIR 10
Match: AT3G21870.1 (cyclin p2;1 ) HSP 1 Score: 143.7 bits (361), Expect = 1.8e-34 Identity = 73/157 (46.50%), Postives = 105/157 (66.88%), Query Frame = 0
BLAST of Carg17546 vs. TAIR 10
Match: AT2G44740.1 (cyclin p4;1 ) HSP 1 Score: 141.0 bits (354), Expect = 1.2e-33 Identity = 70/153 (45.75%), Postives = 100/153 (65.36%), Query Frame = 0
BLAST of Carg17546 vs. TAIR 10
Match: AT5G07450.1 (cyclin p4;3 ) HSP 1 Score: 137.9 bits (346), Expect = 9.8e-33 Identity = 62/154 (40.26%), Postives = 102/154 (66.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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