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Carg17543 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATCAACTTCCCGCGAACGCCGACAATGGAGGCGCTGTATCTCTCCACTTCAGCACCAACCGTTCTTCCATTTCGGAAAACCGTTGGCTCTCGAACCATTTCAAAATCCTCGATTCTCTTCCCTTCTTCATCAAAGTCTCGATTCGCAACGATTTGCAGGCAAAGAATTGATGGAGAAGATACGCCTCTCTCCAATGCTATGGATGCTTACAGATTGTTCGGCGTCGACCCGACCTGCTCCGAATCCGAGCTCAAAGCCGCTTTTCGAGCTAAAGTACGTAGGTTTTACTCGTTGCGATGAAAAATCGGATTGTAGTATCTAGATTTGAGTTTTCGGAATATGATTGGGAAGCGATTAAGTGATTGGCTACTTAGGTTGATTGTAGAATTTTTGGTTTTCTGTACCGATTTTCAATTCGGCTTCGGATTTTTGGCCGTGCAGGTGAAGCAATTCCATCCAGACGTGAATAGAGATGGAAATTATTCCGATTCTATGATTCGTCGTGTAATTCAGGCGTACGAGGTAGCTATTCATTTATAGTATCAAGAAGAAAGTTGTGTGGTGTTCTTATCTCATTGGTGAACGTTGTTTCTTTAGTAGGATGAACATTATGGCAATCATCATTCATGATGACCTTAATTTGATTGTTATCTCCGCGTCCTTTATTACATTGTAGAATTCAAAACTATTGTTCTGTTGTTTCGAGAGAAAGTGCATAGAGAGTAATCTACGAATGGAAAAGATCACCATTAAAGGTTAACGATGAAATATTCAAGCCATAAGTACTTGTTTCGATGCTGACACCACAAGAGACTGTAACAAGCTGGAACTATTTGTGTTCTGATGAAGAACTTGTTCACTTCTATCATCTATGTTATAGTCAATTATGAAACTCAACAATCACTATGCTTTCTACAATATGCAGATGTTGTCAAGTTGCAGCCGAACCGAGTTCATTGAGAGGTATCGTTGTGCTTTTGGTGTTGTTCTTAATGTGTATAGAGCTGCTTAAAATTCTTGCAGCATTCATCATAGAATAAATTGTGTAATGACCATATTCTTGGAAAGTGCAGGGGAATTCTTATTTATAAATGAAAGGTTATAGATAATATGTAACTGTGAGATCCCACCTCGGTTGGAGAGGTAGAGAGGAGAATGAAGCATACTTTATATAGGTGTGGAAACCTCTCCTTAGCATACATGTTTTAAACACCTTGAGAGGAAGCCCGACTGAGAAAGCTCAAAGAGGACAATATCTGTCAGCGGTGGGCTTGAGCTATTACAAATGGTATCAGAGCTATATACGGGGCAATGTGCCAGTGAGAAGGTTGAGCCCCAAAGAGGGGTGGGCACGAGACGGTATGCTAGCAAGGACGCTAGGCCCTGAAGAGGGTAGATTGGGGGGTCTCACATTGATTGGAGAAGGGAACGAGTGCCGGTCAGGATGCTGGACCCCTAAGGGGTAGATTGTGAGATCCCATCGGTTCAGGAGGAGAATGAAGGACCCTTTATAAAGGTGTGGAAACCTTTCACTAGCAGATGCGTTTTAAAAACTAGCCTGGAAGGGAAAGCCCAAAGAGGACGATCTGCCCGCAGTGAGCTTGGGCTATTACAACAACAATGAATTACTTTTTACTCAAAATTTACCATATATTAGGGAGATTAAAGGTCCATTATTGACATTTTATAATTTGATAATGTTCATTTCTATCATTATTCGATGATATATCTATTGTTCATTTTTTATGGAACTCTCACAATCAAACATATGAACTCAGGGAATGTTTAGATCCTTTTGAAAACCCAGAATGTGATGCATTTGATGTCTTTGTTAATGAGTTTCTTTGTGTTGGAAAAGGTACCATCTTTGCTCCAACTTATGAATGTTACAATTTAAGTTCTTTGTTACAATACAACAATCTACCTGTGTTGTGTCATAACAATGTGCAGGTTGCCCATATTCGTGTGTAGACAGAGCTCCCCATGCCTTCACTTTTGCTTCGTCCACCGGGACAGCCCGGGCGACTTCTCAAGGTTCGTTCGAGTGATTATATGCAATTATAATTTCAGTATTTCGAGTGACATATGAAATGTGTATTATTCCTACAACGATTTTATCTTTCGATAAACTAGGACACGGTGAAGATTATCAGGTTCAAATTGCAGTTGGCCAATGCCCCAGAAGCTGTATACATTATGTAACACCTTTGCAAAGAATCATTCTGGTAGAGCTACTTGACAGGTATAAAAATATTCCAACTTAGATTCATGTTCGAAACTATGGTGTCCCACGTTGGTCGGGGAGGAGAACAAACCACCATTTATAAGAGTATGGAAACCTTCCCCTAGAAGACGCGTTTTAAAGCCTTGAGGGGAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGATCTGGGTCGTTACTAATGGTATCAGAGCCAGACACTGGACGATGTGCCAGCCTTCTCGCTGTTCCTTGAAGGGGTAGACAAGAGGCGGTGTGCTAGTAAGGACGCTGGGCCCCAAAGGGGGTGGATTTGGGGACGGTCCCACATCCATTGGAGAAAGGAAAGAGTGCCGGCGAGGACGCTGGGTCCTGAAGGGGAGTAGATTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAACCACCATTTATAAGGGTGTGGAAACTAGCAGACAAGCCTTGAGGGGAAGCCCGAGAAGGAAAAGCCCAAAGAGAATAATATCCACTAGTGGATCTGGGTCGTTACAGAAACCTTACGACTAGAAATCTCAACCCCTCTAAACTTGAATTTTATACTGAATTTATATTATTTATTAAAGGTTCTTACCTTTACTTTATTAGTTTAATTAGAAAGTAGCCTAGTTCGGCTGGGCGAAGCTCCGAATGGAAAGAGTACTCTCGTTAAAATAGGTTCTTACCACATAGCTTTTTGGTGACTTAAGTTCATCTTTGTTTGTGTAGTGCCTTGGATGTGCCATATGATAATTCAGCAGAGGCAGATTTACTATATTCTCTTATAGTGAAATCAAAATTCGAGAATAATCGATACAGGAAGCCGAAGAGGGAGCCAAAGACGTCGACCGAACGAGTCGATTGGTATTGAAATCTTGATTTTACCATCTCGTGTTGAACTGAATCAAGAAGAAACCAATGCAGGTGACAAAATATCTTCTAAGTTCTCTAAAGAAACATATGTGTTAGAGTTCGGTGGGTTAGTTTATTACCCATCAAATGGGATCATTTCGATTCTTTAAATGTTTTAGATTAAGATTTGTATATATCTTAGGGGATCGTTTTGTAATAGAATTATTATTACTATTTTATAATT AAATCAACTTCCCGCGAACGCCGACAATGGAGGCGCTGTATCTCTCCACTTCAGCACCAACCGTTCTTCCATTTCGGAAAACCGTTGGCTCTCGAACCATTTCAAAATCCTCGATTCTCTTCCCTTCTTCATCAAAGTCTCGATTCGCAACGATTTGCAGGCAAAGAATTGATGGAGAAGATACGCCTCTCTCCAATGCTATGGATGCTTACAGATTGTTCGGCGTCGACCCGACCTGCTCCGAATCCGAGCTCAAAGCCGCTTTTCGAGCTAAAGTGAAGCAATTCCATCCAGACGTGAATAGAGATGGAAATTATTCCGATTCTATGATTCGTCGTGTAATTCAGGCGTACGAGATGTTGTCAAGTTGCAGCCGAACCGAGTTCATTGAGAGGTTGCCCATATTCGTGTGTAGACAGAGCTCCCCATGCCTTCACTTTTGCTTCGTCCACCGGGACAGCCCGGGCGACTTCTCAAGTGCCTTGGATGTGCCATATGATAATTCAGCAGAGGCAGATTTACTATATTCTCTTATAGTGAAATCAAAATTCGAGAATAATCGATACAGGAAGCCGAAGAGGGAGCCAAAGACGTCGACCGAACGAGTCGATTGGTATTGAAATCTTGATTTTACCATCTCGTGTTGAACTGAATCAAGAAGAAACCAATGCAGGTGACAAAATATCTTCTAAGTTCTCTAAAGAAACATATGTGTTAGAGTTCGGTGGGTTAGTTTATTACCCATCAAATGGGATCATTTCGATTCTTTAAATGTTTTAGATTAAGATTTGTATATATCTTAGGGGATCGTTTTGTAATAGAATTATTATTACTATTTTATAATT ATGGAGGCGCTGTATCTCTCCACTTCAGCACCAACCGTTCTTCCATTTCGGAAAACCGTTGGCTCTCGAACCATTTCAAAATCCTCGATTCTCTTCCCTTCTTCATCAAAGTCTCGATTCGCAACGATTTGCAGGCAAAGAATTGATGGAGAAGATACGCCTCTCTCCAATGCTATGGATGCTTACAGATTGTTCGGCGTCGACCCGACCTGCTCCGAATCCGAGCTCAAAGCCGCTTTTCGAGCTAAAGTGAAGCAATTCCATCCAGACGTGAATAGAGATGGAAATTATTCCGATTCTATGATTCGTCGTGTAATTCAGGCGTACGAGATGTTGTCAAGTTGCAGCCGAACCGAGTTCATTGAGAGGTTGCCCATATTCGTGTGTAGACAGAGCTCCCCATGCCTTCACTTTTGCTTCGTCCACCGGGACAGCCCGGGCGACTTCTCAAGTGCCTTGGATGTGCCATATGATAATTCAGCAGAGGCAGATTTACTATATTCTCTTATAGTGAAATCAAAATTCGAGAATAATCGATACAGGAAGCCGAAGAGGGAGCCAAAGACGTCGACCGAACGAGTCGATTGGTATTGA MEALYLSTSAPTVLPFRKTVGSRTISKSSILFPSSSKSRFATICRQRIDGEDTPLSNAMDAYRLFGVDPTCSESELKAAFRAKVKQFHPDVNRDGNYSDSMIRRVIQAYEMLSSCSRTEFIERLPIFVCRQSSPCLHFCFVHRDSPGDFSSALDVPYDNSAEADLLYSLIVKSKFENNRYRKPKREPKTSTERVDWY Homology
BLAST of Carg17543 vs. NCBI nr
Match: KAG7021105.1 (dnaJ-5 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 398.3 bits (1022), Expect = 3.9e-107 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of Carg17543 vs. NCBI nr
Match: KAG6586261.1 (Chaperone protein dnaJ C76, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 310.5 bits (794), Expect = 1.1e-80 Identity = 178/261 (68.20%), Postives = 182/261 (69.73%), Query Frame = 0
BLAST of Carg17543 vs. NCBI nr
Match: XP_023537184.1 (uncharacterized protein LOC111798340 [Cucurbita pepo subsp. pepo] >XP_023537185.1 uncharacterized protein LOC111798340 [Cucurbita pepo subsp. pepo] >XP_023537187.1 uncharacterized protein LOC111798340 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 310.5 bits (794), Expect = 1.1e-80 Identity = 178/261 (68.20%), Postives = 182/261 (69.73%), Query Frame = 0
BLAST of Carg17543 vs. NCBI nr
Match: XP_022937591.1 (uncharacterized protein LOC111443953 [Cucurbita moschata] >XP_022937592.1 uncharacterized protein LOC111443953 [Cucurbita moschata] >XP_022937593.1 uncharacterized protein LOC111443953 [Cucurbita moschata]) HSP 1 Score: 307.8 bits (787), Expect = 6.9e-80 Identity = 177/261 (67.82%), Postives = 181/261 (69.35%), Query Frame = 0
BLAST of Carg17543 vs. NCBI nr
Match: XP_022965891.1 (uncharacterized protein LOC111465640 [Cucurbita maxima]) HSP 1 Score: 301.2 bits (770), Expect = 6.5e-78 Identity = 172/261 (65.90%), Postives = 180/261 (68.97%), Query Frame = 0
BLAST of Carg17543 vs. ExPASy Swiss-Prot
Match: B8I304 (Chaperone protein DnaJ OS=Ruminiclostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) OX=394503 GN=dnaJ PE=3 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.8e-06 Identity = 23/63 (36.51%), Postives = 39/63 (61.90%), Query Frame = 0
BLAST of Carg17543 vs. ExPASy Swiss-Prot
Match: A3PNM0 (Chaperone protein DnaJ OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) OX=349101 GN=dnaJ PE=3 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 6.9e-06 Identity = 23/64 (35.94%), Postives = 35/64 (54.69%), Query Frame = 0
BLAST of Carg17543 vs. ExPASy Swiss-Prot
Match: Q3IYM8 (Chaperone protein DnaJ OS=Rhodobacter sphaeroides (strain ATCC 17023 / DSM 158 / JCM 6121 / NBRC 12203 / NCIMB 8253 / ATH 2.4.1.) OX=272943 GN=dnaJ PE=3 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 6.9e-06 Identity = 23/64 (35.94%), Postives = 35/64 (54.69%), Query Frame = 0
BLAST of Carg17543 vs. ExPASy Swiss-Prot
Match: B9KPP3 (Chaperone protein DnaJ OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) OX=557760 GN=dnaJ PE=3 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 6.9e-06 Identity = 23/64 (35.94%), Postives = 35/64 (54.69%), Query Frame = 0
BLAST of Carg17543 vs. ExPASy Swiss-Prot
Match: Q5LWJ5 (Chaperone protein DnaJ OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) OX=246200 GN=dnaJ PE=3 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 6.9e-06 Identity = 23/64 (35.94%), Postives = 36/64 (56.25%), Query Frame = 0
BLAST of Carg17543 vs. ExPASy TrEMBL
Match: A0A6J1FBN2 (uncharacterized protein LOC111443953 OS=Cucurbita moschata OX=3662 GN=LOC111443953 PE=4 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 3.4e-80 Identity = 177/261 (67.82%), Postives = 181/261 (69.35%), Query Frame = 0
BLAST of Carg17543 vs. ExPASy TrEMBL
Match: A0A6J1HMW8 (uncharacterized protein LOC111465640 OS=Cucurbita maxima OX=3661 GN=LOC111465640 PE=4 SV=1) HSP 1 Score: 301.2 bits (770), Expect = 3.1e-78 Identity = 172/261 (65.90%), Postives = 180/261 (68.97%), Query Frame = 0
BLAST of Carg17543 vs. ExPASy TrEMBL
Match: A0A5A7U2T5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00480 PE=4 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 3.5e-61 Identity = 154/268 (57.46%), Postives = 163/268 (60.82%), Query Frame = 0
BLAST of Carg17543 vs. ExPASy TrEMBL
Match: A0A0A0LJM6 (J domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G022810 PE=4 SV=1) HSP 1 Score: 244.2 bits (622), Expect = 4.6e-61 Identity = 154/268 (57.46%), Postives = 164/268 (61.19%), Query Frame = 0
BLAST of Carg17543 vs. ExPASy TrEMBL
Match: A0A6J1D9D8 (pentatricopeptide repeat-containing protein At3g05340 OS=Momordica charantia OX=3673 GN=LOC111018815 PE=3 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 6.2e-58 Identity = 146/270 (54.07%), Postives = 162/270 (60.00%), Query Frame = 0
BLAST of Carg17543 vs. TAIR 10
Match: AT3G05345.1 (Chaperone DnaJ-domain superfamily protein ) HSP 1 Score: 140.2 bits (352), Expect = 1.8e-33 Identity = 92/226 (40.71%), Postives = 121/226 (53.54%), Query Frame = 0
BLAST of Carg17543 vs. TAIR 10
Match: AT1G28210.1 (DNAJ heat shock family protein ) HSP 1 Score: 51.6 bits (122), Expect = 8.3e-07 Identity = 23/69 (33.33%), Postives = 38/69 (55.07%), Query Frame = 0
BLAST of Carg17543 vs. TAIR 10
Match: AT1G28210.2 (DNAJ heat shock family protein ) HSP 1 Score: 51.6 bits (122), Expect = 8.3e-07 Identity = 23/69 (33.33%), Postives = 38/69 (55.07%), Query Frame = 0
BLAST of Carg17543 vs. TAIR 10
Match: AT4G39960.1 (Molecular chaperone Hsp40/DnaJ family protein ) HSP 1 Score: 49.3 bits (116), Expect = 4.1e-06 Identity = 21/64 (32.81%), Postives = 36/64 (56.25%), Query Frame = 0
BLAST of Carg17543 vs. TAIR 10
Match: AT1G80030.1 (Molecular chaperone Hsp40/DnaJ family protein ) HSP 1 Score: 48.5 bits (114), Expect = 7.1e-06 Identity = 26/79 (32.91%), Postives = 42/79 (53.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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