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Carg17529 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTTTAATCTGAGTGGAAATGCTCTCAAGACCTTCGCTCGCTCAGTCACATGCCTTGCTCGCATCGGAAACGAGCTCGTCATCCAAGCTTCTCCATCGCAGGTACTCGATATTCTCCCTTTTTCCTCGAGTTCTGCCTCCCTAGAATAGTTTAATCAAAGATTCTCACATCGTTTGCATCTGAAGAAACAGTAAGCTTAATTTTAGTGCTAAATTTTGATGAGTTCAAAATTAGGCGGAGATATTTGTATTGCGTAAGCGATTCTGGAAACAGTACATTGTTCGGTGAATTTATATCCAATTTATTGACCATTTATGCATGTAGAACGTGGTTAGCAACTTTGAGCGAAATTAACTTCTATATAGAAATGCAAATTTTCCTCTGCTCTTTGTCTGGAACCAAAATTGAGTGAACTTTGTTATGTCAATTTGTAAAATAAGATGGAAATAATGTAGCTAAAACCTTGAGGCTTGCTTAGCTTGTTGAGTTGTTTTGGTATGGAAATTATATGGAAGGATCAATTTTAAAGCTGATTGTTTTATTTTCAAGTTCAGTTGGCTTTTTACACCCTCAATGCATCACGGTCTGCCTATCAAGCTATAACCTTTGAGCCTGGGTTCTTTGATACTTATGCCATTTCTGGTAATCAAGTGCAATGCAGTGTTCTTTTGAAGGTATGCATGATCTTGTGCTGTATTGCATTCACTAACAGTACCTTAGCACCCATGCTTACTTATTATGACATTCCATGTCAGGCTGTCTGCTCTGTTCTTAGAACATCCATTGCTAGCGTAGACCATCTGAGAGTGCGGTTACCAGATACTTATGCATTGAAAATACAATGGAGTTTGGAATGCTTCAATGGTCAGCTGCCCTTTTATAGTTTATACGAGTACTCACGTTTATCTAAAAATCATGTTTAAATGATCTATGTTCATTGATACAGATGCCTACTAATTAAGATTGTCTCACAATGACGACTAACTTACATGGTTCCAGTATGTTGACATTGGTTGATTATATATCCTCTGAGAACTACAAATAAAGCAAATCTAATATTTTTAGTGTCATGTACACTAAGCATACAACATCACTGCATCGTGTGCTGCTATTATGCTGGTAGTTATATTCAAAGATAGAGGGGCAATAAATGAAACCTTTGGTATATATATATATATCTACAACAATGTCCAATAAGCGCAACAAAGTGATGCAAAGGTGAAAATGCACCATGATGATGTCTGTTAATGCGTTCCATGTTTGCAATTCATCCAGTTATCAAGGGTATAGATTACCCTAAACTTGTTAAAATTGGCCTACATAAAAGTGATGCAAGAAGGATCATTGTTCTTACGAAATGATTTTGTGTTTTCAATACTATATAGTTTTATACTATGATAAATTTTCCTTTAAATACATCAATCTTATCTGGTTTGCAGGAATAAAGAAAACATACTGCATTTCTTGCAACGTTGAGCCAGACATACAGCACTTGTCTCTTGACAGGAGACAGTTCCCAAGTGACTTAGTTGTGAGACCTCGAGATCTGAATCGATTACTATCTAATTTTCAGTCATCCTTGCAGGAGATCACTGTTATTGCAACAGAACCAACTTCCTTACCTTCTGAAGCTGCAATTGAGATTGAAGGAAAGGCTGTTGAGCTTCGAAGTTATATAGACCCAACCAAAGGTGATAATGATATGTACAAGCCTAGATTAATTAATATATTTCACCTTAAAATTTTCCCCCCAATCAACTCCTTAGAGATGTTGACTCTTGAAAATTCGTTACATTCAATGGATCTACCAAAATATAGGTGATGCTTCATTCTTTAACTGCAGACAATGACGCGCTGCTTCATACTCAACTCTGGATAGATCCTATGGAAGAGTTTGTCCATTATTCTCACAGTGGAGATCCGGTAGACATAACATTTGGAGTAAAAGAATTGAAGGTACTTGTTGGACCTCACTTGTGGATTAATTCAATTTTTCTTTTTTTTTTTTTTTTTTTTTGGAATGCTGCTCTTCTGGTATTACGACCAACATTTTCTTCTATATGCTTTGTGGTGAGTTGATATTATTGTTGTTATTATTATTTTTACAATCTTGGGCTATATGTAGGAAGCACAATTTAATTTAAAAGCTTATCTTTTTTGATATTCATGGTTGAAATCTTTTCTTAAAGCTTACTTTCATCATCATTTCAGGCATTTCTTTCTTTCTGCGAGGGCTGA ATGGAGTTTAATCTGAGTGGAAATGCTCTCAAGACCTTCGCTCGCTCAGTCACATGCCTTGCTCGCATCGGAAACGAGCTCGTCATCCAAGCTTCTCCATCGCAGTTGGCTTTTTACACCCTCAATGCATCACGGTCTGCCTATCAAGCTATAACCTTTGAGCCTGGGTTCTTTGATACTTATGCCATTTCTGGTAATCAAGTGCAATGCAGTGTTCTTTTGAAGGCTGTCTGCTCTGTTCTTAGAACATCCATTGCTAGCGTAGACCATCTGAGAGTGCGGTTACCAGATACTTATGCATTGAAAATACAATGGAGTTTGGAATGCTTCAATGGAATAAAGAAAACATACTGCATTTCTTGCAACGTTGAGCCAGACATACAGCACTTGTCTCTTGACAGGAGACAGTTCCCAAGTGACTTAGTTGTGAGACCTCGAGATCTGAATCGATTACTATCTAATTTTCAGTCATCCTTGCAGGAGATCACTGTTATTGCAACAGAACCAACTTCCTTACCTTCTGAAGCTGCAATTGAGATTGAAGGAAAGGCTGTTGAGCTTCGAAGTTATATAGACCCAACCAAAGACAATGACGCGCTGCTTCATACTCAACTCTGGATAGATCCTATGGAAGAGTTTGTCCATTATTCTCACAGTGGAGATCCGGTAGACATAACATTTGGAGTAAAAGAATTGAAGGCATTTCTTTCTTTCTGCGAGGGCTGA ATGGAGTTTAATCTGAGTGGAAATGCTCTCAAGACCTTCGCTCGCTCAGTCACATGCCTTGCTCGCATCGGAAACGAGCTCGTCATCCAAGCTTCTCCATCGCAGTTGGCTTTTTACACCCTCAATGCATCACGGTCTGCCTATCAAGCTATAACCTTTGAGCCTGGGTTCTTTGATACTTATGCCATTTCTGGTAATCAAGTGCAATGCAGTGTTCTTTTGAAGGCTGTCTGCTCTGTTCTTAGAACATCCATTGCTAGCGTAGACCATCTGAGAGTGCGGTTACCAGATACTTATGCATTGAAAATACAATGGAGTTTGGAATGCTTCAATGGAATAAAGAAAACATACTGCATTTCTTGCAACGTTGAGCCAGACATACAGCACTTGTCTCTTGACAGGAGACAGTTCCCAAGTGACTTAGTTGTGAGACCTCGAGATCTGAATCGATTACTATCTAATTTTCAGTCATCCTTGCAGGAGATCACTGTTATTGCAACAGAACCAACTTCCTTACCTTCTGAAGCTGCAATTGAGATTGAAGGAAAGGCTGTTGAGCTTCGAAGTTATATAGACCCAACCAAAGACAATGACGCGCTGCTTCATACTCAACTCTGGATAGATCCTATGGAAGAGTTTGTCCATTATTCTCACAGTGGAGATCCGGTAGACATAACATTTGGAGTAAAAGAATTGAAGGCATTTCTTTCTTTCTGCGAGGGCTGA MEFNLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDTYAISGNQVQCSVLLKAVCSVLRTSIASVDHLRVRLPDTYALKIQWSLECFNGIKKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPSEAAIEIEGKAVELRSYIDPTKDNDALLHTQLWIDPMEEFVHYSHSGDPVDITFGVKELKAFLSFCEG Homology
BLAST of Carg17529 vs. NCBI nr
Match: KAG7021091.1 (Cell cycle checkpoint control protein RAD9A, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 484.6 bits (1246), Expect = 5.1e-133 Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0
BLAST of Carg17529 vs. NCBI nr
Match: KAG6586248.1 (Cell cycle checkpoint control protein RAD9A, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 483.0 bits (1242), Expect = 1.5e-132 Identity = 240/241 (99.59%), Postives = 241/241 (100.00%), Query Frame = 0
BLAST of Carg17529 vs. NCBI nr
Match: XP_023537430.1 (cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita pepo subsp. pepo] >XP_023537431.1 cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita pepo subsp. pepo] >XP_023537432.1 cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 482.6 bits (1241), Expect = 1.9e-132 Identity = 240/241 (99.59%), Postives = 241/241 (100.00%), Query Frame = 0
BLAST of Carg17529 vs. NCBI nr
Match: XP_022937528.1 (cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita moschata] >XP_022937529.1 cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita moschata] >XP_022937530.1 cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita moschata] >XP_022937531.1 cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita moschata] >XP_022937532.1 cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita moschata] >XP_022937533.1 cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita moschata]) HSP 1 Score: 481.9 bits (1239), Expect = 3.3e-132 Identity = 239/241 (99.17%), Postives = 241/241 (100.00%), Query Frame = 0
BLAST of Carg17529 vs. NCBI nr
Match: XP_022965728.1 (cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita maxima] >XP_022965729.1 cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita maxima]) HSP 1 Score: 477.6 bits (1228), Expect = 6.2e-131 Identity = 238/241 (98.76%), Postives = 240/241 (99.59%), Query Frame = 0
BLAST of Carg17529 vs. ExPASy Swiss-Prot
Match: Q6WBX8 (Cell cycle checkpoint control protein RAD9B OS=Homo sapiens OX=9606 GN=RAD9B PE=1 SV=2) HSP 1 Score: 75.1 bits (183), Expect = 1.2e-12 Identity = 67/250 (26.80%), Postives = 121/250 (48.40%), Query Frame = 0
BLAST of Carg17529 vs. ExPASy Swiss-Prot
Match: Q5E9X8 (Cell cycle checkpoint control protein RAD9B OS=Bos taurus OX=9913 GN=RAD9B PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 3.0e-11 Identity = 60/247 (24.29%), Postives = 115/247 (46.56%), Query Frame = 0
BLAST of Carg17529 vs. ExPASy Swiss-Prot
Match: P26306 (DNA repair protein rad9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rad9 PE=1 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 6.4e-06 Identity = 51/238 (21.43%), Postives = 93/238 (39.08%), Query Frame = 0
BLAST of Carg17529 vs. ExPASy TrEMBL
Match: A0A6J1FGA2 (cell cycle checkpoint control protein RAD9A isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443913 PE=3 SV=1) HSP 1 Score: 481.9 bits (1239), Expect = 1.6e-132 Identity = 239/241 (99.17%), Postives = 241/241 (100.00%), Query Frame = 0
BLAST of Carg17529 vs. ExPASy TrEMBL
Match: A0A6J1HRT1 (cell cycle checkpoint control protein RAD9A isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465538 PE=3 SV=1) HSP 1 Score: 477.6 bits (1228), Expect = 3.0e-131 Identity = 238/241 (98.76%), Postives = 240/241 (99.59%), Query Frame = 0
BLAST of Carg17529 vs. ExPASy TrEMBL
Match: A0A6J1DB81 (cell cycle checkpoint control protein RAD9A isoform X3 OS=Momordica charantia OX=3673 GN=LOC111018877 PE=3 SV=1) HSP 1 Score: 457.2 bits (1175), Expect = 4.2e-125 Identity = 224/240 (93.33%), Postives = 233/240 (97.08%), Query Frame = 0
BLAST of Carg17529 vs. ExPASy TrEMBL
Match: A0A6J1DBU1 (cell cycle checkpoint control protein RAD9A isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018877 PE=3 SV=1) HSP 1 Score: 457.2 bits (1175), Expect = 4.2e-125 Identity = 224/240 (93.33%), Postives = 233/240 (97.08%), Query Frame = 0
BLAST of Carg17529 vs. ExPASy TrEMBL
Match: A0A6J1DAH3 (cell cycle checkpoint control protein RAD9A isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018877 PE=3 SV=1) HSP 1 Score: 457.2 bits (1175), Expect = 4.2e-125 Identity = 224/240 (93.33%), Postives = 233/240 (97.08%), Query Frame = 0
BLAST of Carg17529 vs. TAIR 10
Match: AT3G05480.1 (cell cycle checkpoint control protein family ) HSP 1 Score: 366.3 bits (939), Expect = 1.9e-101 Identity = 172/241 (71.37%), Postives = 209/241 (86.72%), Query Frame = 0
BLAST of Carg17529 vs. TAIR 10
Match: AT3G05480.3 (cell cycle checkpoint control protein family ) HSP 1 Score: 355.1 bits (910), Expect = 4.3e-98 Identity = 172/258 (66.67%), Postives = 208/258 (80.62%), Query Frame = 0
BLAST of Carg17529 vs. TAIR 10
Match: AT3G05480.2 (cell cycle checkpoint control protein family ) HSP 1 Score: 325.5 bits (833), Expect = 3.7e-89 Identity = 154/226 (68.14%), Postives = 191/226 (84.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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