![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Carg17527 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTCCGCCTTGCAGATGACTCCTCAGTTAGAGCAGATCCATTGTGAAATTCGTGACACTTTTCGAGCACTTTCGTATGTTTTTTTCACCTTACTGTTTTTATTTTGTTGTTATCGCTTCTTTGTGCTTGTGCTTTCCGTTTTTCTATTTATAGCTCATTTTTCTCTTTGTTAAACTCATAACCAATTCCTAGTAGATTGTCCTATTCAACTCAATTGTTTTTGGTTTGGAGGCTTTCGAAGTCTTTGGTTGGGTGATACTATTTATGCGCCTTGTGTCCCCTCCTCGATCTTTTTCCACCTCGTACTTCTCTGCGTTCTTGATCTTATTACTACTGACTCCAGAATTCTGGGAACTTAACATCAGTAAGCCTCCTTTGGGGATTAGACAACTTAGGGCTCATTTGAAAATGTTTTTATTTTTAATATTATGATAATTTACTGAACGTACTTCTTTTTTTGTTAATTTAATAAGAAAAATGTATCTGTTTTATTTTTGAGATTTGAATGATTTCTAAACCTCTTTATAAAAACTGAAAATTTAAACCCAGAAATGTAGGTGAACTTAAATTTTTAACAACTCAAAACTTTAAGCAGATTAAATACTGTGAATCCTTGGGGATAGGTTTATCTGCTAAATTTACCTATTAAACTGGAATTCACTAGCACTAGAAAACCTTGTAGCGTACAAGTCTTAACATATCCCTACTTAAGCAGTGAAGTTGGTCCTAAATTTGGAGGTTTTGTACCGGTAATGTTGCAATATCACTTGAAGTTGATACCATTTATTCAATATCTGCATTATGATGTTTATTCTATACATCAGCATTATGATATCTTCTTTGATTTCTACTTACTATCAGAAATGGGTTCCAAAAACTGGATAAGATCAAGGATTCGAATAGGCAAAGTAAGCAATTGGAAGAGCTCACAGGAAAGATGAGGGAATGTAAAAGGTATGGAAAAGCCAGCACATAGCTCTTTGAGCATGTGGGAGCTTCTCTTGTTGCTTTATGAAAAAACTACAGTTTGTGTCATGCATCCTCAGTCTCTTCATTAAATACTGGAACAGTAAATTCATTTAGATGTTGGCCAAACTAAACACATAAATTGAGAAAAACTAATGTTCAATCAACATGCTTCCTATTTTGTTAATGTTCTTTGTGAATCTTTATTACAGCTCATTACAAAATGGAGCTATTCTTGCAGATTAATAAAAGATTTTGACCGTGAAATCAAGGATGAAGAGACCAAAAGTTCACCGGAAGTGCATAAGCAGCTCAATGATGAGAAGCAATCAATGGTTAGTTCATTGTTATTTTATCTTTCAAACTTAGGACATGAATGCATCTAGTGAAGGAAGTACTTGTATAAATTTTGATGGTTAGCAGATTAAGCGAATTAGTTTACATTGGTTTTGATTGAGGTTGCAAAACTTAGGACATGAGGTTGCCAAATCATAAGCTAGCAGATTTGCTGTTCTGCTGTGGTGAGACGTAAGGCAAGATAATTTGGTGGATTGCTGTCTGCATTTTTTTAGGAAATTAGGGAACGTTGGTGTAGGATTATTAGAGAAGCTTTGACAGATGCCTCTATCCGCCTCAAATGCCATTTTTTTTCCACGAGTACTGTTTACCACATTGCTTGCAGTTCAATTTTATAATTGAATAATTCAAATAATTTATCATTCAAAATAGTTATTTGTATGGAGGCATCACACATTGTCTATTATTTTCTTGTCAACAACCTTGGTCAAAATTTTAGAAAACATTTTAAGTTTTTACTTTCATGCTGGATTGAGTGCTGACTTTGAACTTGAAGCAGAAAAGTAGTTTTTTTATATTTGTATTTTTTTAATTTAGAATGTGAGATAACTCTGAGTATCATCATTTCTAACTGCTCTAGGTTTCCTTATGTTCAATTTCAAGAGCATTGAGAGGATTGAAAATTGTTGGGATATATATATATGGACAGAATAGTATACGTTTTTTCTTTTTCTTTTTTTTTTTAATAAAAAAAAAAAAGAAACTGGGAAATATATGCATTGGCTTATAGATTTAAGATGCCTTGTCATTATCTCATAATTGCCTTGAACGAAGATGTTGGAAAACTATTTGATTGTTGAGAATTTTGTGGTCATGTTGCTTGTTGACGAAAGTGTACTTTTAAAATGTGTCTTTTCTCATGGGACTTCCGAACCAGCTTTTCCTTGGAATTGATCATTTTTTCTATGCCAGTGAGTTACATGTATCACTTATTGATACTGTAAGATGGAACTTTTCCAGCCATCTTTATTATTGCTCTAAATATTTCTTTGGAGATTAGTGTTTACAGTGGTTTTGAATTTAATTGATCTTGTGCTTATTACATTATTTTCATTTTCAGATCAAAGAGCTGAATTCATTTGTTGCATTGAGGAAAACGTAAGTTCTCCCGTTTTCTTATCGGAATGTGGCACTACCTAAGTATATAATTTAGGAGCAAATGATGATTTATTGGGGGGGGGGAGTAATTCTTGCCTGAGAATGGAAGTAATGGGTAAGAAACAAATTTTCCCTCTTGGGAAAATATTTCTGTTTCAATTTCTAGGATGTGGGTGCAGAATATATCCACTACCTTGATTCCAACTCTTCCTAATTTTGTACATATTGGATAGTCACTGGAAGTTTGGTTTTCCAATTGAAAAATGGTAGTACCTTTTGATTCATATATTAGTGAATGCTTCAATATATATATATATATCTTTTCTTTACAAATCTAAGCATGAGAAATCAATTTTTTTAATCTCTTATTTATGTTCTAGTATCTTGTTTTTCTATGGGAATGATGTGTCATAAATTATTGATTCTATTTTGATAGCGGAAGTAGCTGTCAGATGACAAAATAAAAGCAAATGAAGAGGGGTGGGTGTCAGATCCTAGTTGCTTGTTATACTTGCCTTTGTAATTGATTTCCCCTTGTAATTTACTTATTGGAGGTGTTCTTGTTTTTCTCCAAAAGGGGAGTGCCGAATCATAACATTGGTCAAACCTGTTCACTGTATTAATGACAAGTGTTGCCTATTAGAAAAAGAATAAAGGTATAACAATCGAGTCAGTTAGATTTTGATCTCATGCTAATGGTGTGAAGTCACTTCTTTTATTATTATTTTTTTTCACAATGAAACATATGGTTTCTCATATTTAAAAAATATTGCCCAGCCACTGGAATCATTAGTTCCCTTTTTTCAAATGACTGAACGTGGTTCACATAATTCAGCATATTCAATGGTTTGCTCTCAGTATATTGGAATCAAATTGGTGTGAGTTTCTAATGTTTTATTGCTCAATGAATTACAGGTACATGAATAGTCTTGGTAATAAAAGGGTTGAGTTATTTGATGAGGGAGGTGTAAGTGAACCTACAGCTGATGATAATGTTCGGATGGCCTCATGTAAGCTATATTTTCCGTATCTGTAGGCATTCATAGAAAAATTCCCTGGTTGCCTATAGGGGAGGGACTGCTGATATCTACTCCAAAGGGAAGAAATTCCTCTAGGACTTTCCTGTTAAAGAAACAACTGTTGAATTAAGCTTATAATTTAAGAATGTTTTTAAAGCAAGGTTCTTATCATTTTTTAAAATGTTTTTTTTATGCGAGGCTAACGCTCATGTGGTGATGAATGAGGTTATGAAAATCTGCCTCACCCGGCAGCAAGCTTCTTATTTTATGTGCTTGGAATTCTACACAGTATCTATTTTTCTCATTCGATTGGCATGCCTTTGTGCTGTAGCAATGACAAATCAAGAGCTTATAGACGCTGGGAAGAAGACAATGGATGAGACGGATCAGGCTATTGAACGCACTCAAAAGGTGAAGAACTATCTGAAACGTGTGATTTTATCATTTGTATCCCCTTTGTTCTAATGCTTAGCTTTGACCCGTAGGTGGTTGAACAAACTATTGAAGTGGGAACTCAAACTGCTGTTACATTAAAAGGCCAAGTATGTTCAACGTTGAAATTATACCTTATGGTTAAAAGTATATTCTGAGTCTAGCCTGATTAGTAGAATTTCCTGGGTATTCTTTTAACTTTTCCTCATTAAATTTCCAGACTGAACAAATGGGCCGCATAGTAAATGAGCTTGACACAATTAATTTTTCGATTAAGAAAGCATCCCAGCTTGTGAAAGAAATTGGGAGACAGGTAATTTTGGTTTTGTGTCTGGGACACCCCTCCCCCCCACAAATAAAAAGAAAGAAAAACGTGATTTTGGTTTTCTTAGTGGGACTAACCCCTCTCTTCCCCCTTTGGAAAGGTTGCTACGGATAAGTGCATCATGCTGTTTCTATTCCTCATTGTCTGTGGAGTGATAGCCATTATCGTAGTGAAGGTAAATTCTGCTGTTTATTTTGTTATACCTTGAAAGAACAGTTCCAGATGATGGATAATATTTGGTGTGTTTTGTAATAACAAGTTTGATATGTGTAACTTTTCAGATTGTGAACCCCAACAACAAAGACATCAGGGATATTCCTGGACTGGCACCTCCAGCTCCTGCAAGGAGGCTTTTGTATCTGAGGACGCCTGAACATTTCGAGTAAATTCTTATTCTAGGAAGATGTATGCCTTCTTTGTTTGTGTTATATCTATTTCGAGTGAATTATTGCTTAAAGAAGGCATCGAGACATGACACTGTGAGAATTCATCTGCTCTACTTGTATGCAATTCAATCTATTCTTGGCTGAGATGTGCATATTGCTTGGTTGTGATTTTGGTTTCATTTCAAGACACTGGTCCTGTAAATGTTTTACTTTATGAGGTGATTCATGTCTTGCGGAATTCACCCTCCTAACATTCTTATGTACACTTCACAATTAATTACACTCCCACTGCCCACTGCTTCTTCTTTTGGTCCTGTAAATGTTTTACTTT ATGGCCTCCGCCTTGCAGATGACTCCTCAGTTAGAGCAGATCCATTGTGAAATTCGTGACACTTTTCGAGCACTTTCAAATGGGTTCCAAAAACTGGATAAGATCAAGGATTCGAATAGGCAAAGTAAGCAATTGGAAGAGCTCACAGGAAAGATGAGGGAATGTAAAAGATTAATAAAAGATTTTGACCGTGAAATCAAGGATGAAGAGACCAAAAGTTCACCGGAAGTGCATAAGCAGCTCAATGATGAGAAGCAATCAATGATCAAAGAGCTGAATTCATTTGTTGCATTGAGGAAAACGTACATGAATAGTCTTGGTAATAAAAGGGTTGAGTTATTTGATGAGGGAGGTGTAAGTGAACCTACAGCTGATGATAATGTTCGGATGGCCTCATCAATGACAAATCAAGAGCTTATAGACGCTGGGAAGAAGACAATGGATGAGACGGATCAGGCTATTGAACGCACTCAAAAGGTGGTTGAACAAACTATTGAAGTGGGAACTCAAACTGCTGTTACATTAAAAGGCCAAACTGAACAAATGGGCCGCATAGTAAATGAGCTTGACACAATTAATTTTTCGATTAAGAAAGCATCCCAGCTTGTGAAAGAAATTGGGAGACAGGTTGCTACGGATAAGTGCATCATGCTGTTTCTATTCCTCATTGTCTGTGGAGTGATAGCCATTATCGTAGTGAAGATTGTGAACCCCAACAACAAAGACATCAGGGATATTCCTGGACTGGCACCTCCAGCTCCTGCAAGGAGGCTTTTGTATCTGAGGACGCCTGAACATTTCGAGTAAATTCTTATTCTAGGAAGATGTATGCCTTCTTTGTTTGTGTTATATCTATTTCGAGTGAATTATTGCTTAAAGAAGGCATCGAGACATGACACTGTGAGAATTCATCTGCTCTACTTGTATGCAATTCAATCTATTCTTGGCTGAGATGTGCATATTGCTTGGTTGTGATTTTGGTTTCATTTCAAGACACTGGTCCTGTAAATGTTTTACTTTATGAGGTGATTCATGTCTTGCGGAATTCACCCTCCTAACATTCTTATGTACACTTCACAATTAATTACACTCCCACTGCCCACTGCTTCTTCTTTTGGTCCTGTAAATGTTTTACTTT ATGGCCTCCGCCTTGCAGATGACTCCTCAGTTAGAGCAGATCCATTGTGAAATTCGTGACACTTTTCGAGCACTTTCAAATGGGTTCCAAAAACTGGATAAGATCAAGGATTCGAATAGGCAAAGTAAGCAATTGGAAGAGCTCACAGGAAAGATGAGGGAATGTAAAAGATTAATAAAAGATTTTGACCGTGAAATCAAGGATGAAGAGACCAAAAGTTCACCGGAAGTGCATAAGCAGCTCAATGATGAGAAGCAATCAATGATCAAAGAGCTGAATTCATTTGTTGCATTGAGGAAAACGTACATGAATAGTCTTGGTAATAAAAGGGTTGAGTTATTTGATGAGGGAGGTGTAAGTGAACCTACAGCTGATGATAATGTTCGGATGGCCTCATCAATGACAAATCAAGAGCTTATAGACGCTGGGAAGAAGACAATGGATGAGACGGATCAGGCTATTGAACGCACTCAAAAGGTGGTTGAACAAACTATTGAAGTGGGAACTCAAACTGCTGTTACATTAAAAGGCCAAACTGAACAAATGGGCCGCATAGTAAATGAGCTTGACACAATTAATTTTTCGATTAAGAAAGCATCCCAGCTTGTGAAAGAAATTGGGAGACAGGTTGCTACGGATAAGTGCATCATGCTGTTTCTATTCCTCATTGTCTGTGGAGTGATAGCCATTATCGTAGTGAAGATTGTGAACCCCAACAACAAAGACATCAGGGATATTCCTGGACTGGCACCTCCAGCTCCTGCAAGGAGGCTTTTGTATCTGAGGACGCCTGAACATTTCGAGTAA MASALQMTPQLEQIHCEIRDTFRALSNGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIKDFDREIKDEETKSSPEVHKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVSEPTADDNVRMASSMTNQELIDAGKKTMDETDQAIERTQKVVEQTIEVGTQTAVTLKGQTEQMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNNKDIRDIPGLAPPAPARRLLYLRTPEHFE Homology
BLAST of Carg17527 vs. NCBI nr
Match: KAG7021089.1 (putative plant SNARE 13, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 509.6 bits (1311), Expect = 1.6e-140 Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0
BLAST of Carg17527 vs. NCBI nr
Match: KAG6594039.1 (putative plant SNARE 13, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 506.9 bits (1304), Expect = 1.1e-139 Identity = 267/268 (99.63%), Postives = 267/268 (99.63%), Query Frame = 0
BLAST of Carg17527 vs. NCBI nr
Match: XP_023513592.1 (novel plant SNARE 13-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 503.8 bits (1296), Expect = 9.0e-139 Identity = 266/268 (99.25%), Postives = 267/268 (99.63%), Query Frame = 0
BLAST of Carg17527 vs. NCBI nr
Match: XP_022930215.1 (novel plant SNARE 13-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 503.8 bits (1296), Expect = 9.0e-139 Identity = 266/268 (99.25%), Postives = 267/268 (99.63%), Query Frame = 0
BLAST of Carg17527 vs. NCBI nr
Match: XP_023000437.1 (novel plant SNARE 13-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 500.4 bits (1287), Expect = 9.9e-138 Identity = 265/268 (98.88%), Postives = 266/268 (99.25%), Query Frame = 0
BLAST of Carg17527 vs. ExPASy Swiss-Prot
Match: Q9LRP1 (Novel plant SNARE 13 OS=Arabidopsis thaliana OX=3702 GN=NPSN13 PE=1 SV=1) HSP 1 Score: 412.1 bits (1058), Expect = 4.7e-114 Identity = 217/268 (80.97%), Postives = 248/268 (92.54%), Query Frame = 0
BLAST of Carg17527 vs. ExPASy Swiss-Prot
Match: Q9LNH6 (Novel plant SNARE 12 OS=Arabidopsis thaliana OX=3702 GN=NPSN12 PE=2 SV=1) HSP 1 Score: 401.4 bits (1030), Expect = 8.2e-111 Identity = 210/264 (79.55%), Postives = 243/264 (92.05%), Query Frame = 0
BLAST of Carg17527 vs. ExPASy Swiss-Prot
Match: Q944A9 (Novel plant SNARE 11 OS=Arabidopsis thaliana OX=3702 GN=NPSN11 PE=1 SV=2) HSP 1 Score: 315.5 bits (807), Expect = 5.9e-85 Identity = 172/258 (66.67%), Postives = 211/258 (81.78%), Query Frame = 0
BLAST of Carg17527 vs. ExPASy Swiss-Prot
Match: Q2KIU0 (Vesicle transport through interaction with t-SNAREs homolog 1B OS=Bos taurus OX=9913 GN=VTI1B PE=2 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 6.7e-04 Identity = 50/227 (22.03%), Postives = 109/227 (48.02%), Query Frame = 0
BLAST of Carg17527 vs. ExPASy TrEMBL
Match: A0A6J1EWD1 (novel plant SNARE 13-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436737 PE=4 SV=1) HSP 1 Score: 503.8 bits (1296), Expect = 4.3e-139 Identity = 266/268 (99.25%), Postives = 267/268 (99.63%), Query Frame = 0
BLAST of Carg17527 vs. ExPASy TrEMBL
Match: A0A6J1KDM4 (novel plant SNARE 13-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111494705 PE=4 SV=1) HSP 1 Score: 500.4 bits (1287), Expect = 4.8e-138 Identity = 265/268 (98.88%), Postives = 266/268 (99.25%), Query Frame = 0
BLAST of Carg17527 vs. ExPASy TrEMBL
Match: A0A6J1CB99 (novel plant SNARE 13 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009926 PE=4 SV=1) HSP 1 Score: 483.8 bits (1244), Expect = 4.7e-133 Identity = 256/269 (95.17%), Postives = 264/269 (98.14%), Query Frame = 0
BLAST of Carg17527 vs. ExPASy TrEMBL
Match: A0A5D3BXM9 (Putative plant SNARE 13 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00740 PE=4 SV=1) HSP 1 Score: 479.9 bits (1234), Expect = 6.7e-132 Identity = 253/268 (94.40%), Postives = 260/268 (97.01%), Query Frame = 0
BLAST of Carg17527 vs. ExPASy TrEMBL
Match: A0A1S3C842 (novel plant SNARE 13 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497752 PE=4 SV=1) HSP 1 Score: 479.9 bits (1234), Expect = 6.7e-132 Identity = 253/268 (94.40%), Postives = 260/268 (97.01%), Query Frame = 0
BLAST of Carg17527 vs. TAIR 10
Match: AT3G17440.1 (novel plant snare 13 ) HSP 1 Score: 412.1 bits (1058), Expect = 3.3e-115 Identity = 217/268 (80.97%), Postives = 248/268 (92.54%), Query Frame = 0
BLAST of Carg17527 vs. TAIR 10
Match: AT1G48240.1 (novel plant snare 12 ) HSP 1 Score: 401.4 bits (1030), Expect = 5.8e-112 Identity = 210/264 (79.55%), Postives = 243/264 (92.05%), Query Frame = 0
BLAST of Carg17527 vs. TAIR 10
Match: AT3G17440.2 (novel plant snare 13 ) HSP 1 Score: 321.2 bits (822), Expect = 7.7e-88 Identity = 171/212 (80.66%), Postives = 196/212 (92.45%), Query Frame = 0
BLAST of Carg17527 vs. TAIR 10
Match: AT2G35190.1 (novel plant snare 11 ) HSP 1 Score: 315.5 bits (807), Expect = 4.2e-86 Identity = 172/258 (66.67%), Postives = 211/258 (81.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|