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Carg17484 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAGAAGAAGACGGTGACGGAAATACCAGAGGCGAAAACCTTTTCTCCGATCCCCACCGTTAGGTTCAGCGCTGCCTCTGAAATTCCCGGCGGCTATTCCGGCTCTGATCCGCGCATTGGAACACAAACTCTCCGGTAAGTCTCATCGGATCCTAATTAGTTGATTTACAGTTGCAAAGTGAGAGCCGATCGAATTGCGATTTCGAATTCTATTGGAAATTCTGTCCTCTGGCTTTGAATGAATCAGAATTCGTTCGATTTGATTGATATTTATAGTTCATTGCTAAATTACCTGTTGGAACTCGAATTGTTCTTTAGACGTTAAAGAGATCGATCCGCTTACTTTACTTCTTTTCCAGCGATCTTCGCAGTTGGGGAGAACTCGGAGTTCGAATTGAAGGTTAAGACGTTGAATATTGAGATAAATTATGGTGAGGTTTCAATTGTTAAAAGCTTTAACTCACTATGTAGTTGTTGTAGCATGAGAAGTGTTAAGATTGAGAAGGCCATTAGGAGAAAACTTGTTTGTATTTTTGATCCCATTGATTTCATGTTAGGTTCACCACTCTAGCTTTGTAGATGAGGAAGGAATAAGCAAGGCTTGTGGATGCCCCTTACTTCCTTTGAAAAGTCATATAAAGGGTCCTGCTCCAGTTTCAGATCAAGGTTTACACGAACTCAATGGATTATTTTGTTTGTTTCATCTCGTATGTGTTTCGTACTGAAATTCATCTTGGTTGGAAATTCACAGATAAGACTGATATTGTTGATGAAGCAATTACATTCTTTCGTGCCAATGTTTTCTTTAGAAATTTTGACATCAAGAGTCCTGCTGATAAGCTTCTCATCTATTTGACATTCTACATCAATGTGGCTTTGAAGAGGCTTGAAGGTTGCAGAACTTTGGCTGTAGGAACTAAGGCAATAATTAACTTGGGCTTGGAGAATGTTCCCGTGCCTGGAGAGTTGGGCTTTCCCTTTCCAGGACTCTTCCCTATCCCTCAATCTAATGAGGAAGCAGGTGAAGCTCGATTTTAGTTTTTGCTTAACTGCTCGATATCTGTAATGCTTTTATTTGTCAACTAGTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAACCACCATTTATAAGATGTGGAAACTTTTCCCTAGCAGACGCGTTTAAAAGCCTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGATCTGGGTTGTTACAACTAAAAATGCTTACATATGAAGAATCTTCACTTCCCAATGGCCACCGCTAGCTCTGATTGATTGTGAGAACCCACGTTGGTTGAAGAGGGAAACGAAACATTCCTTTTAAGGGTGTGGAAACCTCTCCTTAGTAGACACGTTTTAAAATCTTGAGAGGAAGCCCAGAAGAGAAATCCCAAAGAGGACAATATCTGCTAGCATTGGGCTTAGGCTGTTACAAATGGTATTAGAGCTAGACATCGAGCGGTGTGTCAGTGAGGACGATAGGCCTCCAAGAGGAGTGGATTGTGAGATCCCATATCGGTTAGAGATGAGAATGAAACATTCCTTATAATAGTGTAGAAGTCTCTCCCTAGTAGATGCATTTTAAAACCTTGAGGGGAAAGCCTGGAAAGGAAAGTCCAAAGAAGACAATATTTGCTAGCAGTGAGTTTGGACTATTACATTGATGCAATTCAGATTAGGCACTTCGATCCTTTTTCTGCATTTCACACAAATTACGTCAGTAGTACTACATTCTTTTCCCAAAGGATGGAGATATTATGAGTTCATTTTGTGTGGAAAAAAGCCAGTAAACTCCTGTTCCTTGTCTTAAGATCAACAATTTCATAAGCTTCAAATATGGCTACCTTTATATGCAGAGCTATTCAGGAATTATTTGAGGCAAATAAGAGAAGAAACAAGTGGGAGACTCTTGAGTGTTGCGTATAGAGCCAATGGAACTCCAAATAAATGGTGGCTAGCATTTGCAAAGAGG ATGGAAAGAAGAAGACGGTTCAGCGCTGCCTCTGAAATTCCCGGCGGCTATTCCGGCTCTGATCCGCGCATTGGAACACAAACTCTCCGCGATCTTCGCAGTTGGGGAGAACTCGGAGTTCACCACTCTAGCTTTGTAGATGAGGAAGGAATAAGCAAGGCTTGTGGATGCCCCTTACTTCCTTTGAAAAGTCATATAAAGGGTCCTGCTCCAGTTTCAGATCAAGATAAGACTGATATTGTTGATGAAGCAATTACATTCTTTCGTGCCAATGTTTTCTTTAGAAATTTTGACATCAAGAGTCCTGCTGATAAGCTTCTCATCTATTTGACATTCTACATCAATGTGGCTTTGAAGAGGCTTGAAGGTTGCAGAACTTTGGCTGTAGGAACTAAGGCAATAATTAACTTGGGCTTGGAGAATGTTCCCGTGCCTGGAGAGAATTATTTGAGGCAAATAAGAGAAGAAACAAGTGGGAGACTCTTGAGTGTTGCGTATAGAGCCAATGGAACTCCAAATAAATGGTGGCTAGCATTTGCAAAGAGG ATGGAAAGAAGAAGACGGTTCAGCGCTGCCTCTGAAATTCCCGGCGGCTATTCCGGCTCTGATCCGCGCATTGGAACACAAACTCTCCGCGATCTTCGCAGTTGGGGAGAACTCGGAGTTCACCACTCTAGCTTTGTAGATGAGGAAGGAATAAGCAAGGCTTGTGGATGCCCCTTACTTCCTTTGAAAAGTCATATAAAGGGTCCTGCTCCAGTTTCAGATCAAGATAAGACTGATATTGTTGATGAAGCAATTACATTCTTTCGTGCCAATGTTTTCTTTAGAAATTTTGACATCAAGAGTCCTGCTGATAAGCTTCTCATCTATTTGACATTCTACATCAATGTGGCTTTGAAGAGGCTTGAAGGTTGCAGAACTTTGGCTGTAGGAACTAAGGCAATAATTAACTTGGGCTTGGAGAATGTTCCCGTGCCTGGAGAGAATTATTTGAGGCAAATAAGAGAAGAAACAAGTGGGAGACTCTTGAGTGTTGCGTATAGAGCCAATGGAACTCCAAATAAATGGTGGCTAGCATTTGCAAAGAGG MERRRRFSAASEIPGGYSGSDPRIGTQTLRDLRSWGELGVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGENYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKR Homology
BLAST of Carg17484 vs. NCBI nr
Match: KAG7021226.1 (Actin-related protein 2/3 complex subunit 3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 376.3 bits (965), Expect = 1.5e-100 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of Carg17484 vs. NCBI nr
Match: XP_022938181.1 (actin-related protein 2/3 complex subunit 3 isoform X1 [Cucurbita moschata] >XP_022965982.1 actin-related protein 2/3 complex subunit 3 [Cucurbita maxima] >KAG6586375.1 Actin-related protein 2/3 complex subunit 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 284.6 bits (727), Expect = 5.8e-73 Identity = 143/165 (86.67%), Postives = 143/165 (86.67%), Query Frame = 0
BLAST of Carg17484 vs. NCBI nr
Match: XP_023536665.1 (actin-related protein 2/3 complex subunit 3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 284.6 bits (727), Expect = 5.8e-73 Identity = 143/165 (86.67%), Postives = 143/165 (86.67%), Query Frame = 0
BLAST of Carg17484 vs. NCBI nr
Match: XP_008457213.1 (PREDICTED: actin-related protein 2/3 complex subunit 3 [Cucumis melo]) HSP 1 Score: 283.5 bits (724), Expect = 1.3e-72 Identity = 142/165 (86.06%), Postives = 143/165 (86.67%), Query Frame = 0
BLAST of Carg17484 vs. NCBI nr
Match: XP_038889879.1 (actin-related protein 2/3 complex subunit 3 [Benincasa hispida] >XP_038889880.1 actin-related protein 2/3 complex subunit 3 [Benincasa hispida]) HSP 1 Score: 282.3 bits (721), Expect = 2.9e-72 Identity = 141/165 (85.45%), Postives = 143/165 (86.67%), Query Frame = 0
BLAST of Carg17484 vs. ExPASy Swiss-Prot
Match: Q1ECJ7 (Actin-related protein 2/3 complex subunit 3 OS=Arabidopsis thaliana OX=3702 GN=ARPC3 PE=1 SV=1) HSP 1 Score: 273.1 bits (697), Expect = 2.3e-72 Identity = 134/165 (81.21%), Postives = 142/165 (86.06%), Query Frame = 0
BLAST of Carg17484 vs. ExPASy Swiss-Prot
Match: Q3T035 (Actin-related protein 2/3 complex subunit 3 OS=Bos taurus OX=9913 GN=ARPC3 PE=1 SV=3) HSP 1 Score: 127.9 bits (320), Expect = 1.2e-28 Identity = 70/166 (42.17%), Postives = 98/166 (59.04%), Query Frame = 0
BLAST of Carg17484 vs. ExPASy Swiss-Prot
Match: O15145 (Actin-related protein 2/3 complex subunit 3 OS=Homo sapiens OX=9606 GN=ARPC3 PE=1 SV=3) HSP 1 Score: 127.9 bits (320), Expect = 1.2e-28 Identity = 70/166 (42.17%), Postives = 98/166 (59.04%), Query Frame = 0
BLAST of Carg17484 vs. ExPASy Swiss-Prot
Match: Q9JM76 (Actin-related protein 2/3 complex subunit 3 OS=Mus musculus OX=10090 GN=Arpc3 PE=1 SV=3) HSP 1 Score: 126.7 bits (317), Expect = 2.7e-28 Identity = 70/166 (42.17%), Postives = 98/166 (59.04%), Query Frame = 0
BLAST of Carg17484 vs. ExPASy Swiss-Prot
Match: A1DPK7 (Actin-related protein 2/3 complex subunit 3-A OS=Xenopus laevis OX=8355 GN=arpc3-a PE=1 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 3.2e-26 Identity = 61/147 (41.50%), Postives = 86/147 (58.50%), Query Frame = 0
BLAST of Carg17484 vs. ExPASy TrEMBL
Match: A0A6J1HLS5 (Actin-related protein 2/3 complex subunit 3 OS=Cucurbita maxima OX=3661 GN=LOC111465702 PE=3 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 2.8e-73 Identity = 143/165 (86.67%), Postives = 143/165 (86.67%), Query Frame = 0
BLAST of Carg17484 vs. ExPASy TrEMBL
Match: A0A6J1FCE9 (Actin-related protein 2/3 complex subunit 3 OS=Cucurbita moschata OX=3662 GN=LOC111444343 PE=3 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 2.8e-73 Identity = 143/165 (86.67%), Postives = 143/165 (86.67%), Query Frame = 0
BLAST of Carg17484 vs. ExPASy TrEMBL
Match: A0A1S3C5N9 (Actin-related protein 2/3 complex subunit 3 OS=Cucumis melo OX=3656 GN=LOC103496939 PE=3 SV=1) HSP 1 Score: 283.5 bits (724), Expect = 6.3e-73 Identity = 142/165 (86.06%), Postives = 143/165 (86.67%), Query Frame = 0
BLAST of Carg17484 vs. ExPASy TrEMBL
Match: A0A0A0LI55 (Actin-related protein 2/3 complex subunit 3 OS=Cucumis sativus OX=3659 GN=Csa_2G008100 PE=3 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 1.5e-71 Identity = 140/165 (84.85%), Postives = 141/165 (85.45%), Query Frame = 0
BLAST of Carg17484 vs. ExPASy TrEMBL
Match: A0A6J1CN65 (Actin-related protein 2/3 complex subunit 3 OS=Momordica charantia OX=3673 GN=LOC111013027 PE=3 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 1.5e-71 Identity = 138/165 (83.64%), Postives = 143/165 (86.67%), Query Frame = 0
BLAST of Carg17484 vs. TAIR 10
Match: AT1G60430.1 (actin-related protein C3 ) HSP 1 Score: 273.1 bits (697), Expect = 1.6e-73 Identity = 134/165 (81.21%), Postives = 142/165 (86.06%), Query Frame = 0
BLAST of Carg17484 vs. TAIR 10
Match: AT1G60430.2 (actin-related protein C3 ) HSP 1 Score: 273.1 bits (697), Expect = 1.6e-73 Identity = 134/165 (81.21%), Postives = 142/165 (86.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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