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Carg17470 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAAGAAATTGATGGAAGCCATGAAGGGTGTCGACTTACAGAGGTACATGGGTCGATGGTACGAAATAGCTTCATTTCCTTCGAGGTTCCAGCCCAGAAATGGAGCCAATACCAGAGCGACCTACACTCTGAGGGGCGACCATGGGTTGATGGCAAGAGAGGGTTCATTGAGGGTACTGCTGTTAAGGCCAACCCTGATAGTGATGAAGCTAAGCTCCAAGTTAAATTCTATGTTCCTCCTTTTATGCCTATCGTTCCTGTTGTTGGAGATTACTGGGTGTTGTATCTTAATGGTGATTAGCACCATGCTTTGATTGGTCAGCCCAGTAGAAATTACCCATTTTCTGCTAATCCTACGATTCCATGGGGAGTTTCGGATGTTGTTTGTGAAGTGTTCTAACATCTTTGGCTTGATATGTAGAGGATCGTTGGGAAGGAGTCTCACATTAGGGTTATAAGTGAGGAATACATCTCCATTGATATGAGGCCTTTTGGGACGCCCAAAAGCAAAACCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAAGGTCGTGACTTCTAACATGATAACTATTCGGGTAGTTTTGAAAAACTCGTTTTAGTTTTTGGAATTTGATTAGGAAATCGAACTTTCTTTGAAAGTGAAGAATGGGTAAGAAAATAAGTATAAATTTTAAAAATAGATAACCAAAAATGGAATTGTAACGGCCCAAATCCACCTCTAGCAGATATTGTCTTCTTTGGGCTACCTCTCAAGGTTTCTAAAACGCATGTCTGCTAGGAAGAGGTTTCCACATCCTTATATACAAAAATGCTTCGTTTTCCTATTCAATCGATATGGGATCTCACGGGAATGGTTACTAAACAGTCTCTAACGGTTGAGTTATGATGATGGAAGGTTTATGAATCGTGTTGTTTCGTGGTGTCTTTTTGACAGATTTTGTGCAGACAGACTCATTTGGATGAGGAGATATATAAGCAGCTGGTGGAGAAAGCTAAGGAACAGGGTTATGATGTGAGCAAGCTGCGCAGGACAACACACACAGACCCTCCACCAGAGGGAGATGAAGGCCCAAAAGATACAAAAGGAATATGGTGGATCAAATCAATCCTTGGAAAATGA ATGGCGAAGAAATTGATGGAAGCCATGAAGGGTGTCGACTTACAGAGGTACATGGGTCGATGGTACGAAATAGCTTCATTTCCTTCGAGGTTCCAGCCCAGAAATGGAGCCAATACCAGAGCGACCTACACTCTGAGGGGCGACCATGGGTTGATGGCAAGAGAGGGTTCATTGAGGATTTTGTGCAGACAGACTCATTTGGATGAGGAGATATATAAGCAGCTGGTGGAGAAAGCTAAGGAACAGGGTTATGATGTGAGCAAGCTGCGCAGGACAACACACACAGACCCTCCACCAGAGGGAGATGAAGGCCCAAAAGATACAAAAGGAATATGGTGGATCAAATCAATCCTTGGAAAATGA ATGGCGAAGAAATTGATGGAAGCCATGAAGGGTGTCGACTTACAGAGGTACATGGGTCGATGGTACGAAATAGCTTCATTTCCTTCGAGGTTCCAGCCCAGAAATGGAGCCAATACCAGAGCGACCTACACTCTGAGGGGCGACCATGGGTTGATGGCAAGAGAGGGTTCATTGAGGATTTTGTGCAGACAGACTCATTTGGATGAGGAGATATATAAGCAGCTGGTGGAGAAAGCTAAGGAACAGGGTTATGATGTGAGCAAGCTGCGCAGGACAACACACACAGACCCTCCACCAGAGGGAGATGAAGGCCCAAAAGATACAAAAGGAATATGGTGGATCAAATCAATCCTTGGAAAATGA MAKKLMEAMKGVDLQRYMGRWYEIASFPSRFQPRNGANTRATYTLRGDHGLMAREGSLRILCRQTHLDEEIYKQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSILGK Homology
BLAST of Carg17470 vs. NCBI nr
Match: KAG7021212.1 (Temperature-induced lipocalin-1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 252.7 bits (644), Expect = 1.6e-63 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
BLAST of Carg17470 vs. NCBI nr
Match: KAF2309866.1 (hypothetical protein GH714_005420 [Hevea brasiliensis]) HSP 1 Score: 191.0 bits (484), Expect = 5.8e-45 Identity = 92/127 (72.44%), Postives = 105/127 (82.68%), Query Frame = 0
BLAST of Carg17470 vs. NCBI nr
Match: XP_008457325.1 (PREDICTED: temperature-induced lipocalin-1-like [Cucumis melo] >XP_008457334.1 PREDICTED: temperature-induced lipocalin-1-like [Cucumis melo] >KAA0063507.1 temperature-induced lipocalin-1-like [Cucumis melo var. makuwa] >TYJ97834.1 temperature-induced lipocalin-1-like [Cucumis melo var. makuwa]) HSP 1 Score: 184.5 bits (467), Expect = 5.4e-43 Identity = 103/185 (55.68%), Postives = 109/185 (58.92%), Query Frame = 0
BLAST of Carg17470 vs. NCBI nr
Match: XP_038890101.1 (temperature-induced lipocalin-1-like [Benincasa hispida]) HSP 1 Score: 179.1 bits (453), Expect = 2.3e-41 Identity = 101/185 (54.59%), Postives = 107/185 (57.84%), Query Frame = 0
BLAST of Carg17470 vs. NCBI nr
Match: XP_004139285.1 (temperature-induced lipocalin-1 [Cucumis sativus] >KGN60731.1 hypothetical protein Csa_019524 [Cucumis sativus]) HSP 1 Score: 178.3 bits (451), Expect = 3.9e-41 Identity = 101/185 (54.59%), Postives = 106/185 (57.30%), Query Frame = 0
BLAST of Carg17470 vs. ExPASy Swiss-Prot
Match: Q9FGT8 (Temperature-induced lipocalin-1 OS=Arabidopsis thaliana OX=3702 GN=TIL PE=1 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 2.7e-29 Identity = 72/183 (39.34%), Postives = 92/183 (50.27%), Query Frame = 0
BLAST of Carg17470 vs. ExPASy TrEMBL
Match: A0A6A6MCC5 (Lipocln_cytosolic_FA-bd_dom domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_005420 PE=4 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 2.8e-45 Identity = 92/127 (72.44%), Postives = 105/127 (82.68%), Query Frame = 0
BLAST of Carg17470 vs. ExPASy TrEMBL
Match: A0A1S3C5X6 (temperature-induced lipocalin-1-like OS=Cucumis melo OX=3656 GN=LOC103497043 PE=3 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 2.6e-43 Identity = 103/185 (55.68%), Postives = 109/185 (58.92%), Query Frame = 0
BLAST of Carg17470 vs. ExPASy TrEMBL
Match: A0A5A7V949 (Temperature-induced lipocalin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00440 PE=3 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 2.6e-43 Identity = 103/185 (55.68%), Postives = 109/185 (58.92%), Query Frame = 0
BLAST of Carg17470 vs. ExPASy TrEMBL
Match: A0A0A0LL45 (Apolipoprotein d OS=Cucumis sativus OX=3659 GN=Csa_2G008710 PE=3 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 1.9e-41 Identity = 101/185 (54.59%), Postives = 106/185 (57.30%), Query Frame = 0
BLAST of Carg17470 vs. ExPASy TrEMBL
Match: A0A7J7HV97 (Lipocln_cytosolic_FA-bd_dom domain-containing protein OS=Camellia sinensis OX=4442 GN=HYC85_004008 PE=3 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 2.1e-40 Identity = 94/185 (50.81%), Postives = 108/185 (58.38%), Query Frame = 0
BLAST of Carg17470 vs. TAIR 10
Match: AT5G58070.1 (temperature-induced lipocalin ) HSP 1 Score: 129.4 bits (324), Expect = 1.9e-30 Identity = 72/183 (39.34%), Postives = 92/183 (50.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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