![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Carg17466 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAAAAAAGAAAAAAGGAAAAGCGTGGAAAAGAAGTCGCCGGAACAAAACCGGCGACCAAATGCTGCGCGCGTTGAGCCCCGCGCCATTCGTCTATTTTTTCTCTGTTCTTCCTCCTCCGTCCTCTTTACCTAATCGCAGCCTTCATCGCTTCTCTCCAATGGCTGTCTTTGCTCGAATTGCAGTCGTCGGTGACGTCGTATGCTTTTCTTTCTCTTTTTCAACTGTTGATTTTGGTAAATTCGAGTTCATTTTTATGTAATGGAATGGTTAATACACTTATTTTAAGGGAAGAGATAAGAATTTTTTTATTCATTAATTTTTGTTTCGAGGAAATTACGGCTGTTCTGTTCTTTAAATGTTTTGTCCTGCTTACTCTTTACGTTTTATAGCATGGAGATTGGGATTTACGAGAAGACACCAAGGCACTTCAACTATTGCAGGTAAGTTTTCTTTCTGTAATCCGTAGTTTAGCTGAATTATAATCTATTGATTGAAACTTTTGTCTAGAGAATATTTACACGGATTGATTGAGCTTTGTAATGGTTCTGGTTTTTGATTCCTGCTTCAACCATTGCATCTCCTCTTTTGTTTTAAGTGTCAGTACAGGACATCATTAGCTCCTATGAGTTGGGGTCTGAGTGAAACATAATCTCTTTGTTTCTCAATCAATTTTTTTGGTTACCTAGATAACTCGTAAGATATTAAATCTTAAGTAGGTGGCCGTCCTGACTTAAATTCATTCTCTCTAAACCTTTTATTGTTTACGGCCCTTCTTGACGCGAACACGATGCTGGTTGAATCAATTAAGAAATGAAACTACTTCCAATCGGCAGAAAATTCATTGGGTGGTTTGTAGAAGTGTTTAGTTTTAATAGCTGTAACTACATTTGTAAGATCGAAGTCAATGAGATGAACTTGCAGCAATATTGGATGGTTATGTATATACTTTCTCATATTTACAGTGTGAGATCCCACTTCGGTTGGGGAGGTGAACGAGACACCCTTTATAAGAGTGTGGAAACCTCTTCCTAGTAGATGCGTTTTAAAAACCTTGAGGGTAAGCCCGAAAGGGAAAGTTCAAAAAGGACAATATCTGCTAGCAGTGGGCTTGAGCTGTTACATACAGTGTTCATGTAAACTTGTGCATATTATGATTAATCTCGTAGGAATAGGATAAGTATTTGAGTTTACCATATTTGATGTTAGAAACTGAGGAGCTATATTGTGGGCGGGTGCTACTAAGACTTCTATAATTGATCAAATTCTTACTTGCTCAAGGATCCCTTCCCTACCGAATGAATTTTGAGACTCCTTGATGAGCTCTTTATTCACGCCTACAAACCAATCTGACTGAAAAACTGAGTACAATTTTGTTGTCTCAAAAGGATGCGGAGCATTGAGACATACTATGTTTTTGCAATGCGTGGAAGTTGGAAATGTCCACTTGCATTAATTTTGACTATTAGTTATAATGCCAGCTCCCTTTTTTATATATAAAGAACTCTAAATTTCCAGCTGTATAACCTTCCTCAATGACAACAACTACCACGTGTCTTTACAAGACATAAGCGTCACTTTAGAAAATAAACAAATGCAATCTCCACCGTGGTAGTGGAGTCTTAATAGGACCACCTCGGATCTCTACTTAATCCGATTAATATACCAACACCTATATGAATGTGTATCACACGATCAACTCTGTATAGGTCGAGCAGAAGAGCTGTGCAAGCACCACCGACACAGTAGCCTCTGAGTAACAACTTTCTGCGTTCTCACACCATTGCGCGAAGTGAAGAAGTTGTCAGCCAGGTTGTTGCAGGATGTGTGTTATATATGCTTCTCTCTTGTTATATATGTGTTACGACCATTTTCAACTCTCGACGGATCGATTCTTATACACTTTGTATGCTATTGGAATCTCAGAGGCACAGTGACTGCATACCTCATCCATTAGAACCGGTCTCGCCTGTGTGTTTCATAAAGCATGTGCCCGATGAGAAACAGGAGACCTTGAGTATGTCTGTTAAAACACAGGCCCCAAAACGCGAGGTTATCCAGAGATATATCCGTCTACTCCTTAGCCCAAGCTTGGTGCTGACTGAGCTATAATACCCAACATCGATGTGTCCTAGAGAATAGATCCTCAAATCGTTGAGATGAGAGATTCCCTTTCTTCACTAGGATTTCATAAACTATGTGCTTCGAGATACTCGCGCTGGCCGGAGGTCTTACAGCAAGCCGAGGACGTTAACCCCTCAAGGAGATTTGATACGAATCACTCATGCGATACGAGTCAGGTGA AAAAAAAAAAAAGAAAAAAGGAAAAGCGTGGAAAAGAAGTCGCCGGAACAAAACCGGCGACCAAATGCTGCGCGCGTTGAGCCCCGCGCCATTCGTCTATTTTTTCTCTGTTCTTCCTCCTCCGTCCTCTTTACCTAATCGCAGCCTTCATCGCTTCTCTCCAATGGCTGTCTTTGCTCGAATTGCAGTCGTCGGTGACGTCCATGGAGATTGGGATTTACGAGAAGACACCAAGGCACTTCAACTATTGCAGAGGCACAGTGACTGCATACCTCATCCATTAGAACCGGTCTCGCCTGTGTGTTTCATAAAGCATGTGCCCGATGAGAAACAGGAGACCTTGAGTATGTCTGTTAAAACACAGGCCCCAAAACGCGAGGATTTCATAAACTATGTGCTTCGAGATACTCGCGCTGGCCGGAGGTCTTACAGCAAGCCGAGGACGTTAACCCCTCAAGGAGATTTGATACGAATCACTCATGCGATACGAGTCAGGTGA ATGCTGCGCGCGTTGAGCCCCGCGCCATTCGTCTATTTTTTCTCTGTTCTTCCTCCTCCGTCCTCTTTACCTAATCGCAGCCTTCATCGCTTCTCTCCAATGGCTGTCTTTGCTCGAATTGCAGTCGTCGGTGACGTCCATGGAGATTGGGATTTACGAGAAGACACCAAGGCACTTCAACTATTGCAGAGGCACAGTGACTGCATACCTCATCCATTAGAACCGGTCTCGCCTGTGTGTTTCATAAAGCATGTGCCCGATGAGAAACAGGAGACCTTGAGTATGTCTGTTAAAACACAGGCCCCAAAACGCGAGGATTTCATAAACTATGTGCTTCGAGATACTCGCGCTGGCCGGAGGTCTTACAGCAAGCCGAGGACGTTAACCCCTCAAGGAGATTTGATACGAATCACTCATGCGATACGAGTCAGGTGA MLRALSPAPFVYFFSVLPPPSSLPNRSLHRFSPMAVFARIAVVGDVHGDWDLREDTKALQLLQRHSDCIPHPLEPVSPVCFIKHVPDEKQETLSMSVKTQAPKREDFINYVLRDTRAGRRSYSKPRTLTPQGDLIRITHAIRVR Homology
BLAST of Carg17466 vs. NCBI nr
Match: KAG7021208.1 (hypothetical protein SDJN02_17896 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 296.2 bits (757), Expect = 1.5e-76 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0
BLAST of Carg17466 vs. NCBI nr
Match: XP_022938172.1 (uncharacterized protein LOC111444337 isoform X1 [Cucurbita moschata]) HSP 1 Score: 129.8 bits (325), Expect = 1.9e-26 Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 0
BLAST of Carg17466 vs. NCBI nr
Match: XP_022965815.1 (uncharacterized protein LOC111465590 isoform X1 [Cucurbita maxima]) HSP 1 Score: 125.9 bits (315), Expect = 2.7e-25 Identity = 61/63 (96.83%), Postives = 61/63 (96.83%), Query Frame = 0
BLAST of Carg17466 vs. NCBI nr
Match: XP_023537032.1 (uncharacterized protein LOC111798237 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 125.6 bits (314), Expect = 3.6e-25 Identity = 60/63 (95.24%), Postives = 60/63 (95.24%), Query Frame = 0
BLAST of Carg17466 vs. NCBI nr
Match: XP_038890595.1 (uncharacterized protein LOC120080106 isoform X2 [Benincasa hispida]) HSP 1 Score: 97.8 bits (242), Expect = 8.0e-17 Identity = 47/63 (74.60%), Postives = 52/63 (82.54%), Query Frame = 0
BLAST of Carg17466 vs. ExPASy TrEMBL
Match: A0A6J1FDA2 (uncharacterized protein LOC111444337 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444337 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 9.2e-27 Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 0
BLAST of Carg17466 vs. ExPASy TrEMBL
Match: A0A6J1HPT5 (uncharacterized protein LOC111465590 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465590 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 1.3e-25 Identity = 61/63 (96.83%), Postives = 61/63 (96.83%), Query Frame = 0
BLAST of Carg17466 vs. ExPASy TrEMBL
Match: A0A5A7V5N3 (Metallophos domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold329G00480 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 1.2e-15 Identity = 48/83 (57.83%), Postives = 57/83 (68.67%), Query Frame = 0
BLAST of Carg17466 vs. ExPASy TrEMBL
Match: A0A5D3BFP4 (Metallophos domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00820 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 2.1e-15 Identity = 44/63 (69.84%), Postives = 50/63 (79.37%), Query Frame = 0
BLAST of Carg17466 vs. ExPASy TrEMBL
Match: A0A1S3C3R1 (uncharacterized protein LOC103496658 OS=Cucumis melo OX=3656 GN=LOC103496658 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 2.1e-15 Identity = 44/63 (69.84%), Postives = 50/63 (79.37%), Query Frame = 0
BLAST of Carg17466 vs. TAIR 10
Match: AT5G58200.2 (Calcineurin-like metallo-phosphoesterase superfamily protein ) HSP 1 Score: 42.7 bits (99), Expect = 2.8e-04 Identity = 18/25 (72.00%), Postives = 22/25 (88.00%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|