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Carg17457 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGCCGACGGCGTCCTCCGCCCCGTCTACGAGGCTTGCATCGCCGGCTGTGATTCCGAAATCCACCGTCGTCCCTACCATCGCAACTGCGGCTGCGCTCTCCACGAATCCCGCCGTCAACTTTCTCACTGCTACCATTCCAAGTACAAATCCGTCTCCTATCCCATTCGCCGATCCTGGAGCGAAGGTTGCTTGACGCTCGCCTTCGCCTCTCCTTCCTCTTCCCCTTCCTCCTCCCCTGTCGTCGGTAAGTTCTCACAGCCTGGTGCCGCTTTGAGCGACGACGACGACGACGACGCTCCTGTTCAGTTTAACAGGAGTTGA ATGGCCGCCGACGGCGTCCTCCGCCCCGTCTACGAGGCTTGCATCGCCGGCTGTGATTCCGAAATCCACCGTCGTCCCTACCATCGCAACTGCGGCTGCGCTCTCCACGAATCCCGCCGTCAACTTTCTCACTGCTACCATTCCAAGTACAAATCCGTCTCCTATCCCATTCGCCGATCCTGGAGCGAAGGTTGCTTGACGCTCGCCTTCGCCTCTCCTTCCTCTTCCCCTTCCTCCTCCCCTGTCGTCGGTAAGTTCTCACAGCCTGGTGCCGCTTTGAGCGACGACGACGACGACGACGCTCCTGTTCAGTTTAACAGGAGTTGA ATGGCCGCCGACGGCGTCCTCCGCCCCGTCTACGAGGCTTGCATCGCCGGCTGTGATTCCGAAATCCACCGTCGTCCCTACCATCGCAACTGCGGCTGCGCTCTCCACGAATCCCGCCGTCAACTTTCTCACTGCTACCATTCCAAGTACAAATCCGTCTCCTATCCCATTCGCCGATCCTGGAGCGAAGGTTGCTTGACGCTCGCCTTCGCCTCTCCTTCCTCTTCCCCTTCCTCCTCCCCTGTCGTCGGTAAGTTCTCACAGCCTGGTGCCGCTTTGAGCGACGACGACGACGACGACGCTCCTGTTCAGTTTAACAGGAGTTGA MAADGVLRPVYEACIAGCDSEIHRRPYHRNCGCALHESRRQLSHCYHSKYKSVSYPIRRSWSEGCLTLAFASPSSSPSSSPVVGKFSQPGAALSDDDDDDAPVQFNRS Homology
BLAST of Carg17457 vs. NCBI nr
Match: KAG7021199.1 (hypothetical protein SDJN02_17887, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 223.8 bits (569), Expect = 7.2e-55 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of Carg17457 vs. NCBI nr
Match: XP_022938303.1 (uncharacterized protein LOC111444438 [Cucurbita moschata]) HSP 1 Score: 220.7 bits (561), Expect = 6.1e-54 Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0
BLAST of Carg17457 vs. NCBI nr
Match: KAG6586353.1 (hypothetical protein SDJN03_19086, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 219.9 bits (559), Expect = 1.0e-53 Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0
BLAST of Carg17457 vs. NCBI nr
Match: XP_023536961.1 (uncharacterized protein LOC111798188 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 213.4 bits (542), Expect = 9.8e-52 Identity = 105/109 (96.33%), Postives = 106/109 (97.25%), Query Frame = 0
BLAST of Carg17457 vs. NCBI nr
Match: XP_022965412.1 (uncharacterized protein LOC111465326 [Cucurbita maxima]) HSP 1 Score: 195.7 bits (496), Expect = 2.1e-46 Identity = 99/108 (91.67%), Postives = 99/108 (91.67%), Query Frame = 0
BLAST of Carg17457 vs. ExPASy TrEMBL
Match: A0A6J1FII0 (uncharacterized protein LOC111444438 OS=Cucurbita moschata OX=3662 GN=LOC111444438 PE=4 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 3.0e-54 Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0
BLAST of Carg17457 vs. ExPASy TrEMBL
Match: A0A6J1HKA0 (uncharacterized protein LOC111465326 OS=Cucurbita maxima OX=3661 GN=LOC111465326 PE=4 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 1.0e-46 Identity = 99/108 (91.67%), Postives = 99/108 (91.67%), Query Frame = 0
BLAST of Carg17457 vs. ExPASy TrEMBL
Match: A0A1S4E0F4 (uncharacterized protein LOC103499614 OS=Cucumis melo OX=3656 GN=LOC103499614 PE=4 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 1.1e-43 Identity = 90/107 (84.11%), Postives = 97/107 (90.65%), Query Frame = 0
BLAST of Carg17457 vs. ExPASy TrEMBL
Match: A0A6J1KE46 (uncharacterized protein LOC111493529 OS=Cucurbita maxima OX=3661 GN=LOC111493529 PE=4 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 5.8e-42 Identity = 88/108 (81.48%), Postives = 94/108 (87.04%), Query Frame = 0
BLAST of Carg17457 vs. ExPASy TrEMBL
Match: A0A0A0LI78 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009330 PE=4 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 4.9e-41 Identity = 86/107 (80.37%), Postives = 94/107 (87.85%), Query Frame = 0
BLAST of Carg17457 vs. TAIR 10
Match: AT5G35110.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 84.7 bits (208), Expect = 4.9e-17 Identity = 48/103 (46.60%), Postives = 62/103 (60.19%), Query Frame = 0
BLAST of Carg17457 vs. TAIR 10
Match: AT2G46490.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35110.1); Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 82.8 bits (203), Expect = 1.9e-16 Identity = 50/115 (43.48%), Postives = 65/115 (56.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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