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Carg17438 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGAAACTCACGATCATGGGCCACGGTGATCGAAGGCTCAAGTCGCTATGCGGGGCAAAGCTCAGACACCTGCAGGCCCCTAAACCAATATTCTTGCGAAAATGGGGACGGATTCCATCAAACAATCGCACACCCAACCAGCAAGCAACTGTGGAGGAGGAACCTCCATTTCTTCCCCATGGGACACATCCAGGTCAGATCTAGCGAAATCGACACACCCAATTGCTTGAATCGCTCTATCTTGTTCATAATTCGAACCCCTTTTTCTGCGATTTAGGAAAAAGAAGCGAAGAAGGAAGCATTTAGGAAGTATTTGGAGTCTAATGGCGTTGTTGATGCTCTCACCAAAGGTTGATTCTCACCATTTCTCTGCTTCAATCCGTATTGCGTTTGAATTTTGATACATTTTCTTTTCTGCGTTCTTTTGCTGGTTGAAGTTCTGGTTGCGTTGTTTGAGCAACACGATAAGCCTTCCTCTGCTCTCGAGTAAGTTCTTGCTTTGAGCTTTTGATAGGTGAAGTTAACCATTGTTCTAGCTATTGATTTTGCACCTAATATCTCGTTTGGCTGTTAGACGAACACAACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGACTTCCCCAAAAGGCCTCGTATCAATGGAGAGAGTATTCGTTGATTATAAACCCATGATCATTCCCTAAATTAGCCGATGTGTGACTTTCATCATCCAACATTGGCATTTTCAAATCTCATATTGTTCTACTAATGTTGTCCAATCAATAGTTGATCTTAGTTACAAGCTGTCTAAACAATGTTTTTATCTTATTTTGATTCCTAAACTTTAGTTTCGGTCCATTTTCAAATCCTTTAATCACTTTCTTATTGAAAATAATGGCATGATTCATTCGAATTCTGGTCTGTTTGAGCTTGAGGAGGTTGGATTAGTTTCGTTTTTCTGAATTATTTGAAAGTTGTGAGGAGATTTCAAATCTTTCTCCTTCTGAATCCTGTCAAGCATTCAATCAAAGCATGTTTTATGTTTAGAAAGTCAAACAATAAACTACAAGGTGTTTGCCATGTTAGAAATTTTGTGAGATCCCACATCGGTGGGAGAGGAGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAAACCTTGAGGGGAGGTCCAAAGAGGACAATATCTGCTAGTGTGGGCTTGGGCTGATATAAATAGTATTGTATCAAAGCCAGGCACCGGGCGATGTGCTAGTGAGGAGGGTGAGCCCTGAAGGGGGGTGGTGGACATGAGGCGGTGTGCCAACAAGGACGCTGGCACCAGGGGGGTGGATTGGAGGGGTATTGGAGAAAGAAGCATTCTTTATAAGGGTTGTGAGATCCCACATCTGTTGGGGAGGAGAACGAAACATTTTTTATAAGGGTGTGGAAACTTCTCTACAGTAGGCGCGTTTTAAAAACCTTGTGGGGAAACCCGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTACGGTGGGCTTGAGTCATTACAGAACGAGTGCCAGCGAGGATGCTGGTTCCCGAAGGGGGTGGATTATGAGATTCCACATCAGTTGGGGAGGAGAATGAAGCCTTCTTTATAAGGGTGTGGAAACTTCTCCATAGCAAACGCGTTTTAAAAATCTTGAGGGGAAACCCGAAAGGGAAAGCTCAAAAAGGACAATATTTGCTACGGTGGGCTTGGGTCATTACAACACGAGTGCCAGCGAGGACGTTGGTCCCCGAAGGGGGGTGGATTGTGAGATTCCACATCGGTTGGGGAGGAGAATGAAGCCTTCTTTATAAGGGTGTGGAAACTTCTCCATAGTAGACCGTGTTTTCAAAACCTTGAAGGGAAACCCAAAAGGGAAAGCCCAAAGAGGACAATATCTGCTACGGTGGGCTTGGGTCATTACAACACGAGTGCGGGCGAGGACGCTGGGCCCCGAAGGGGGGTGGGGTGGATTGTGAGATTCCACATCGGTTGGGGAGGAGAACGAAGCATTCTTTATAAGGGTGTGGAAACTTCTCCATAGCAGACACGTTTTAAAAACTTTGAGGGGAAACCCGAAAGGGAAAGCCCAAAGAAGACAATATATGCTACGGTGGGCTTGAGTCATTACAGAACGAGTGCCAACGAGGACGCTGGGCCCTGAAGGGAGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAACAGATACGTTTTAAAAACTTTGAAGGAAAGCCCGGAAAGGAAAGTCCAAAGAGGACAATATCTGCTAGCGGTGGTTTTAACCATTACTTATTCTCAACTAGAGTTTTCTTGTGAAAGTTATCATTTACTGTTGCTTGTAATTTGAAATGCTTAAGAAGTGTAGATTTCTTCTTCTTCCTTTCTAAAAATAAATGAATGATTTTATTGAAGAGAACATTCCGATAGGAAGCACTATTGATAGACTTTTTTTCTTTTACTCTCACAGATTTATTCAACAAAGACTAGGCGGTCCATCTATAGCTGAATACGAGAAGTTACAATCCGAGATGGCGGATTTGCAAGTCAAGTATGACGAGCTTTTAGCTACCCACAAGGAAACCTGTAAAGAGGTAGCGTTGAAATTATCGGACTCGATACTATTACACGTTGTTAAGAATATATGTAATGAATAAGTATATCGTGTTGCAGTTGGAAGGACTTAAAAGTTCGCATAACGTCACGACAATGTCTACCAAGGATACCACTGATGACGAGGAGGAAAACGATAAGGTATGAAGGGCTAATTGAGTTGCACATAGGAGGTTGATGGATTTTCTATATGACAGCCAAGAAAAAGAAAGTGATATCTATTTCCTTTAAGGTATGTGAAGATCTTACGCTATGAACGTTAAAAAGTTGAATTGTATGAAGATCATTCATCTTTTTACCTTTGATTCTTTGACATTGTTTGCTTTTGATAACTCTCGCTTTAGTTCTAGTTTTGGTGTGATGTTTTTAGTGTACATTCGAAAATGAAACGGAAAACGTGCATGTGCCATGGAAAGAACATAACTATAATCTCCTTTGCTGAAACTCTCATGGAACAGCTTAAGCCCACTGCTAGCAAATATTATCCTCGTTGGGTTTTCCCTTTCATGTTTCCTCTAAAGGTTTTTAAAACGTGTCTGTTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCGTTCTCCTCC CGAAACTCACGATCATGGGCCACGGTGATCGAAGGCTCAAGTCGCTATGCGGGGCAAAGCTCAGACACCTGCAGGCCCCTAAACCAATATTCTTGCGAAAATGGGGACGGATTCCATCAAACAATCGCACACCCAACCAGCAAGCAACTGTGGAGGAGGAACCTCCATTTCTTCCCCATGGGACACATCCAGGAAAAAGAAGCGAAGAAGGAAGCATTTAGGAAGTATTTGGAGTCTAATGGCGTTGTTGATGCTCTCACCAAAGTTCTGGTTGCGTTGTTTGAGCAACACGATAAGCCTTCCTCTGCTCTCGAATTTATTCAACAAAGACTAGGCGGTCCATCTATAGCTGAATACGAGAAGTTACAATCCGAGATGGCGGATTTGCAAGTCAAGTATGACGAGCTTTTAGCTACCCACAAGGAAACCTGTAAAGAGTTGGAAGGACTTAAAAGTTCGCATAACGTCACGACAATGTCTACCAAGGATACCACTGATGACGAGGAGGAAAACGATAAGGTATGAAGGGCTAATTGAGTTGCACATAGGAGGTTGATGGATTTTCTATATGACAGCCAAGAAAAAGAAAGTGATATCTATTTCCTTTAAGGTATGTGAAGATCTTACGCTATGAACGTTAAAAAGTTGAATTGTATGAAGATCATTCATCTTTTTACCTTTGATTCTTTGACATTGTTTGCTTTTGATAACTCTCGCTTTAGTTCTAGTTTTGGTGTGATGTTTTTAGTGTACATTCGAAAATGAAACGGAAAACGTGCATGTGCCATGGAAAGAACATAACTATAATCTCCTTTGCTGAAACTCTCATGGAACAGCTTAAGCCCACTGCTAGCAAATATTATCCTCGTTGGGTTTTCCCTTTCATGTTTCCTCTAAAGGTTTTTAAAACGTGTCTGTTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCGTTCTCCTCC ATGGGACACATCCAGGAAAAAGAAGCGAAGAAGGAAGCATTTAGGAAGTATTTGGAGTCTAATGGCGTTGTTGATGCTCTCACCAAAGTTCTGGTTGCGTTGTTTGAGCAACACGATAAGCCTTCCTCTGCTCTCGAATTTATTCAACAAAGACTAGGCGGTCCATCTATAGCTGAATACGAGAAGTTACAATCCGAGATGGCGGATTTGCAAGTCAAGTATGACGAGCTTTTAGCTACCCACAAGGAAACCTGTAAAGAGTTGGAAGGACTTAAAAGTTCGCATAACGTCACGACAATGTCTACCAAGGATACCACTGATGACGAGGAGGAAAACGATAAGGTATGA MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSSHNVTTMSTKDTTDDEEENDKV Homology
BLAST of Carg17438 vs. NCBI nr
Match: KAG7021180.1 (C-Myc-binding protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 222.2 bits (565), Expect = 2.2e-54 Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0
BLAST of Carg17438 vs. NCBI nr
Match: KAG6586333.1 (c-Myc-binding protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 222.2 bits (565), Expect = 2.2e-54 Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0
BLAST of Carg17438 vs. NCBI nr
Match: XP_022938294.1 (c-Myc-binding protein homolog [Cucurbita moschata]) HSP 1 Score: 218.0 bits (554), Expect = 4.2e-53 Identity = 113/115 (98.26%), Postives = 113/115 (98.26%), Query Frame = 0
BLAST of Carg17438 vs. NCBI nr
Match: XP_023537914.1 (c-Myc-binding protein homolog [Cucurbita pepo subsp. pepo]) HSP 1 Score: 215.3 bits (547), Expect = 2.7e-52 Identity = 112/115 (97.39%), Postives = 113/115 (98.26%), Query Frame = 0
BLAST of Carg17438 vs. NCBI nr
Match: XP_022965975.1 (c-Myc-binding protein homolog [Cucurbita maxima]) HSP 1 Score: 207.6 bits (527), Expect = 5.7e-50 Identity = 108/115 (93.91%), Postives = 111/115 (96.52%), Query Frame = 0
BLAST of Carg17438 vs. ExPASy Swiss-Prot
Match: Q2TBP7 (c-Myc-binding protein OS=Bos taurus OX=9913 GN=MYCBP PE=3 SV=3) HSP 1 Score: 79.3 bits (194), Expect = 3.1e-14 Identity = 38/85 (44.71%), Postives = 62/85 (72.94%), Query Frame = 0
BLAST of Carg17438 vs. ExPASy Swiss-Prot
Match: Q99417 (c-Myc-binding protein OS=Homo sapiens OX=9606 GN=MYCBP PE=1 SV=3) HSP 1 Score: 79.3 bits (194), Expect = 3.1e-14 Identity = 38/85 (44.71%), Postives = 62/85 (72.94%), Query Frame = 0
BLAST of Carg17438 vs. ExPASy Swiss-Prot
Match: Q5R7A8 (c-Myc-binding protein OS=Pongo abelii OX=9601 GN=MYCBP PE=3 SV=3) HSP 1 Score: 79.3 bits (194), Expect = 3.1e-14 Identity = 38/85 (44.71%), Postives = 62/85 (72.94%), Query Frame = 0
BLAST of Carg17438 vs. ExPASy Swiss-Prot
Match: Q9EQS3 (c-Myc-binding protein OS=Mus musculus OX=10090 GN=Mycbp PE=1 SV=5) HSP 1 Score: 78.2 bits (191), Expect = 6.8e-14 Identity = 38/85 (44.71%), Postives = 61/85 (71.76%), Query Frame = 0
BLAST of Carg17438 vs. ExPASy Swiss-Prot
Match: Q54I57 (c-Myc-binding protein homolog OS=Dictyostelium discoideum OX=44689 GN=mycbp PE=3 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 9.9e-13 Identity = 39/84 (46.43%), Postives = 55/84 (65.48%), Query Frame = 0
BLAST of Carg17438 vs. ExPASy TrEMBL
Match: A0A6J1FDN0 (c-Myc-binding protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111444425 PE=3 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 2.0e-53 Identity = 113/115 (98.26%), Postives = 113/115 (98.26%), Query Frame = 0
BLAST of Carg17438 vs. ExPASy TrEMBL
Match: A0A6J1HQ97 (c-Myc-binding protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111465694 PE=3 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 2.8e-50 Identity = 108/115 (93.91%), Postives = 111/115 (96.52%), Query Frame = 0
BLAST of Carg17438 vs. ExPASy TrEMBL
Match: A0A1S3C377 (c-Myc-binding protein homolog OS=Cucumis melo OX=3656 GN=LOC103496370 PE=3 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 2.0e-48 Identity = 103/115 (89.57%), Postives = 110/115 (95.65%), Query Frame = 0
BLAST of Carg17438 vs. ExPASy TrEMBL
Match: A0A5A7V8R5 (c-Myc-binding protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G001130 PE=3 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 8.3e-47 Identity = 101/111 (90.99%), Postives = 107/111 (96.40%), Query Frame = 0
BLAST of Carg17438 vs. ExPASy TrEMBL
Match: A0A6J1CPJ0 (c-Myc-binding protein homolog OS=Momordica charantia OX=3673 GN=LOC111012942 PE=3 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 1.6e-45 Identity = 97/115 (84.35%), Postives = 108/115 (93.91%), Query Frame = 0
BLAST of Carg17438 vs. TAIR 10
Match: AT2G14045.1 (unknown protein; Has 257 Blast hits to 257 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). ) HSP 1 Score: 142.5 bits (358), Expect = 2.1e-34 Identity = 73/109 (66.97%), Postives = 94/109 (86.24%), Query Frame = 0
BLAST of Carg17438 vs. TAIR 10
Match: AT2G14045.2 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 142.5 bits (358), Expect = 2.1e-34 Identity = 73/109 (66.97%), Postives = 94/109 (86.24%), Query Frame = 0
BLAST of Carg17438 vs. TAIR 10
Match: AT2G14045.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown. ) HSP 1 Score: 114.8 bits (286), Expect = 4.7e-26 Identity = 54/73 (73.97%), Postives = 69/73 (94.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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