Carg17342 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTCAATCCGACCTTCTTCATTTCCTCTCTCTGTAATTCTCCTCAGTCGTCAGCAATCACCATGGCCATGGCTCTAAGACCCATTGATAACGCACTGCCGGTTACACCAGAACGGCCGAAGAAACAAGCGAAAGTGGCCGTTCCAGTCCAGAAGCGAAGCGATTCCGGTGTAAACGATGAGAATCAGGCTCCGGTTCCTCCTTCTACAGATGCTGCCATTGATTACGTTCCTTCTGAGAATCTGAAGCCCTTGACGGACCCTGATTCTAATGTAACTATACTCATTTCCTCTTTGTATCTGAATTTCTTGTTTGTTTCTAGATCTGATTTTTGGTCTGTTCTTTTTTTTCTTTATTGTGTTAGAATTTCATTGAAGAATTAGATTCGAAGGATTGGGTGAAAGTCTGTGAATCGCTCAATAATGCTAGACGTCTCGCGATTTTTCACTCCGACATTTTGCTCCCTTCGTTGTAAGTAGAATACTCTTGTTTTGAAATTCTAGGGTTAGGAAATTCTGGAGATGATTTTTCTTGTTTTGATGAATTACAGAGAGAAAGTTATAGCGATTCTGATGAAATCGATGAAAAACCCTAGAAGTGCCCTAATTAAGACCTCGATCATGGCTTCGTCTGACATTTTCAACGCATTTGGTGATCAGTTACTCGAAACATCCACTACCAATGCATTTGATCAATTGGTGAGAGCATGCAATTGAATTTCTTCGGTCTTTTCCTTTTGTGATCATTATTATGAGCAGCTAATGCAGTGTGTTATTCTGGATCTGTTGGATAATCATTTAGTTCTTCAAAAACTATCTTCAGATCAAGTTTTGAAGAAGTTTTTACAATTTTTTTTCTTGGAATTCGGCTAAGAAACTTTGATATACGTGACTTTGGACTTCAGCTGCTTCAATTACTGCTCAAAGCTTCTCAGGACAAGAAATTTGTGTGTGAAGAAGCAGACAAGGCACTGAAAGCTCTAGTGAAATCCATGGCTGCTCTGCCTCTGCTGCAAAAGCTTAAGCCGTATGTCTCCCATTCAAACCTAAGAGTCAGAGCCAAAGCCGCCATTCCAATCTCCAATTGTGTCTCTAAGATGGTACAAAAGTTCTTGCTTATTGCCTTGATTCTTCTCATTTTTGTTCAAAAACTGGACTGAACTGATGAATTTTAACATGGGTTGCTGCTAATTTCTTCAAGGGCCTGGAAGAAATGAACCAATATGGGATTGTCCCATTGCTTCAAATGGCTGCAGATTTGCTAAACGATAGGCTACCTGAGGCAAGGGAAGCAGCTCGGAGTATAGTGATGGGAGTGTTCAAAGCATTCACTGCAAACGAGGAAGAGAAACAGGAGGCTTGGCAAAGCTTTTGCCAAACTAATCTGTCGCCGATTCAAGCTCAGTCTTTGCTCAAAGTTACCTCTTCCCTATAAGCGGTGGCTTTGGGGGGTTAAGGTTAGATAAGTGCTGCTGGGCTTGGCAGACCCTTAGGATGATGATGATCATCAAGATTTCTTTTAGGTTTGGGAATTTTTATGTGTTCTATGAAAGCTTCCACTCTTACATGATGAGTTCTGCTTTCTACTTCTTAGGAATTTGTTCTGTAGAACAGCTTTTTTCTTGTTGTTCTCTTCTTTCCCTTCACCTTTGTTGGTGTGAAAGAGAGATTGTGAAAGACAATAAACAAGTTGTTGTTGCACATTTGACGGTAGAGCATGAGCATATGAGATGGATGCTATCTTTCCATTCTTTTGCGAGCCGTTAATTTATTTATTAAAGTATCGCCCGTCTTCATTTACCCCAACTTTTTTGGTGTACTTCAACTTCGTTCTAAATATAAGAATAGGGGTTAGTTGGAAATAGTGTGAAACTCATTTAGTACCCACAAGTCGGTACTTCTTGCTTTGATAACTATCACTATAATCGTTGGAATTGGTTGGTTGCTTGCTTGATTGGTGAAAGGCCAGCCTCTTAACTTAGCTTTGATTGATCATGCATCGAGCTTTTTAGGCTTCATTTCCCTACTCTAGTCCAAAACTAGCTATTATCTTCCTCAGTCCCGTTATCACGCTAGCTAGGCATTTACCTTGGAATGGTAGACTATTTCCCTACTCTAGTCCAAAACTAGCTATTATCTTCCTCAGTCCCGTTATCACGCTAGCTAGGCATTTACCTTGGAATGGTAGACTA ATTTCAATCCGACCTTCTTCATTTCCTCTCTCTGTAATTCTCCTCAGTCGTCAGCAATCACCATGGCCATGGCTCTAAGACCCATTGATAACGCACTGCCGGTTACACCAGAACGGCCGAAGAAACAAGCGAAAGTGGCCGTTCCAGTCCAGAAGCGAAGCGATTCCGGTGTAAACGATGAGAATCAGGCTCCGGTTCCTCCTTCTACAGATGCTGCCATTGATTACGTTCCTTCTGAGAATCTGAAGCCCTTGACGGACCCTGATTCTAATAATTTCATTGAAGAATTAGATTCGAAGGATTGGGTGAAAGTCTGTGAATCGCTCAATAATGCTAGACGTCTCGCGATTTTTCACTCCGACATTTTGCTCCCTTCGTTAGAGAAAGTTATAGCGATTCTGATGAAATCGATGAAAAACCCTAGAAGTGCCCTAATTAAGACCTCGATCATGGCTTCGTCTGACATTTTCAACGCATTTGGTGATCAGTTACTCGAAACATCCACTACCAATGCATTTGATCAATTGCTGCTTCAATTACTGCTCAAAGCTTCTCAGGACAAGAAATTTGTGTGTGAAGAAGCAGACAAGGCACTGAAAGCTCTAGTGAAATCCATGGCTGCTCTGCCTCTGCTGCAAAAGCTTAAGCCGTATGTCTCCCATTCAAACCTAAGAGTCAGAGCCAAAGCCGCCATTCCAATCTCCAATTGTGTCTCTAAGATGGGCCTGGAAGAAATGAACCAATATGGGATTGTCCCATTGCTTCAAATGGCTGCAGATTTGCTAAACGATAGGCTACCTGAGGCAAGGGAAGCAGCTCGGAGTATAGTGATGGGAGTGTTCAAAGCATTCACTGCAAACGAGGAAGAGAAACAGGAGGCTTGGCAAAGCTTTTGCCAAACTAATCTGTCGCCGATTCAAGCTCAGTCTTTGCTCAAAGTTACCTCTTCCCTATAAGCGGTGGCTTTGGGGGGTTAAGGTTAGATAAGTGCTGCTGGGCTTGGCAGACCCTTAGGATGATGATGATCATCAAGATTTCTTTTAGGTTTGGGAATTTTTATGTGTTCTATGAAAGCTTCCACTCTTACATGATGAGTTCTGCTTTCTACTTCTTAGGAATTTGTTCTGTAGAACAGCTTTTTTCTTGTTGTTCTCTTCTTTCCCTTCACCTTTGTTGGTGTGAAAGAGAGATTGTGAAAGACAATAAACAAGTTGTTGTTGCACATTTGACGGTAGAGCATGAGCATATGAGATGGATGCTATCTTTCCATTCTTTTGCGAGCCGTTAATTTATTTATTAAAGTATCGCCCGTCTTCATTTACCCCAACTTTTTTGGTGTACTTCAACTTCGTTCTAAATATAAGAATAGGGGTTAGTTGGAAATAGTGTGAAACTCATTTAGTACCCACAAGTCGGTACTTCTTGCTTTGATAACTATCACTATAATCGTTGGAATTGGTTGGTTGCTTGCTTGATTGGTGAAAGGCCAGCCTCTTAACTTAGCTTTGATTGATCATGCATCGAGCTTTTTAGGCTTCATTTCCCTACTCTAGTCCAAAACTAGCTATTATCTTCCTCAGTCCCGTTATCACGCTAGCTAGGCATTTACCTTGGAATGGTAGACTATTTCCCTACTCTAGTCCAAAACTAGCTATTATCTTCCTCAGTCCCGTTATCACGCTAGCTAGGCATTTACCTTGGAATGGTAGACTA ATGGCCATGGCTCTAAGACCCATTGATAACGCACTGCCGGTTACACCAGAACGGCCGAAGAAACAAGCGAAAGTGGCCGTTCCAGTCCAGAAGCGAAGCGATTCCGGTGTAAACGATGAGAATCAGGCTCCGGTTCCTCCTTCTACAGATGCTGCCATTGATTACGTTCCTTCTGAGAATCTGAAGCCCTTGACGGACCCTGATTCTAATAATTTCATTGAAGAATTAGATTCGAAGGATTGGGTGAAAGTCTGTGAATCGCTCAATAATGCTAGACGTCTCGCGATTTTTCACTCCGACATTTTGCTCCCTTCGTTAGAGAAAGTTATAGCGATTCTGATGAAATCGATGAAAAACCCTAGAAGTGCCCTAATTAAGACCTCGATCATGGCTTCGTCTGACATTTTCAACGCATTTGGTGATCAGTTACTCGAAACATCCACTACCAATGCATTTGATCAATTGCTGCTTCAATTACTGCTCAAAGCTTCTCAGGACAAGAAATTTGTGTGTGAAGAAGCAGACAAGGCACTGAAAGCTCTAGTGAAATCCATGGCTGCTCTGCCTCTGCTGCAAAAGCTTAAGCCGTATGTCTCCCATTCAAACCTAAGAGTCAGAGCCAAAGCCGCCATTCCAATCTCCAATTGTGTCTCTAAGATGGGCCTGGAAGAAATGAACCAATATGGGATTGTCCCATTGCTTCAAATGGCTGCAGATTTGCTAAACGATAGGCTACCTGAGGCAAGGGAAGCAGCTCGGAGTATAGTGATGGGAGTGTTCAAAGCATTCACTGCAAACGAGGAAGAGAAACAGGAGGCTTGGCAAAGCTTTTGCCAAACTAATCTGTCGCCGATTCAAGCTCAGTCTTTGCTCAAAGTTACCTCTTCCCTATAA MAMALRPIDNALPVTPERPKKQAKVAVPVQKRSDSGVNDENQAPVPPSTDAAIDYVPSENLKPLTDPDSNNFIEELDSKDWVKVCESLNNARRLAIFHSDILLPSLEKVIAILMKSMKNPRSALIKTSIMASSDIFNAFGDQLLETSTTNAFDQLLLQLLLKASQDKKFVCEEADKALKALVKSMAALPLLQKLKPYVSHSNLRVRAKAAIPISNCVSKMGLEEMNQYGIVPLLQMAADLLNDRLPEAREAARSIVMGVFKAFTANEEEKQEAWQSFCQTNLSPIQAQSLLKVTSSL Homology
BLAST of Carg17342 vs. NCBI nr
Match: KAG7028980.1 (TOG array regulator of axonemal microtubules protein 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 560.8 bits (1444), Expect = 6.9e-156 Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0
BLAST of Carg17342 vs. NCBI nr
Match: XP_022955952.1 (uncharacterized protein LOC111457759 [Cucurbita moschata]) HSP 1 Score: 559.3 bits (1440), Expect = 2.0e-155 Identity = 296/297 (99.66%), Postives = 296/297 (99.66%), Query Frame = 0
BLAST of Carg17342 vs. NCBI nr
Match: KAG6597523.1 (TOG array regulator of axonemal microtubules protein 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 552.0 bits (1421), Expect = 3.2e-153 Identity = 291/292 (99.66%), Postives = 291/292 (99.66%), Query Frame = 0
BLAST of Carg17342 vs. NCBI nr
Match: XP_022973664.1 (uncharacterized protein LOC111472248 [Cucurbita maxima] >XP_022975175.1 uncharacterized protein LOC111474211 [Cucurbita maxima]) HSP 1 Score: 548.9 bits (1413), Expect = 2.7e-152 Identity = 292/297 (98.32%), Postives = 292/297 (98.32%), Query Frame = 0
BLAST of Carg17342 vs. NCBI nr
Match: XP_023540087.1 (TOG array regulator of axonemal microtubules protein 2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 546.2 bits (1406), Expect = 1.7e-151 Identity = 290/297 (97.64%), Postives = 290/297 (97.64%), Query Frame = 0
BLAST of Carg17342 vs. ExPASy Swiss-Prot
Match: Q6A070 (TOG array regulator of axonemal microtubules protein 1 OS=Mus musculus OX=10090 GN=Togaram1 PE=1 SV=3) HSP 1 Score: 64.3 bits (155), Expect = 2.6e-09 Identity = 67/246 (27.24%), Postives = 111/246 (45.12%), Query Frame = 0
BLAST of Carg17342 vs. ExPASy Swiss-Prot
Match: Q9Y4F4 (TOG array regulator of axonemal microtubules protein 1 OS=Homo sapiens OX=9606 GN=TOGARAM1 PE=1 SV=4) HSP 1 Score: 60.8 bits (146), Expect = 2.9e-08 Identity = 43/141 (30.50%), Postives = 72/141 (51.06%), Query Frame = 0
BLAST of Carg17342 vs. ExPASy TrEMBL
Match: A0A6J1GV13 (uncharacterized protein LOC111457759 OS=Cucurbita moschata OX=3662 GN=LOC111457759 PE=4 SV=1) HSP 1 Score: 559.3 bits (1440), Expect = 9.7e-156 Identity = 296/297 (99.66%), Postives = 296/297 (99.66%), Query Frame = 0
BLAST of Carg17342 vs. ExPASy TrEMBL
Match: A0A6J1IF80 (uncharacterized protein LOC111472248 OS=Cucurbita maxima OX=3661 GN=LOC111472248 PE=4 SV=1) HSP 1 Score: 548.9 bits (1413), Expect = 1.3e-152 Identity = 292/297 (98.32%), Postives = 292/297 (98.32%), Query Frame = 0
BLAST of Carg17342 vs. ExPASy TrEMBL
Match: A0A6J1C894 (uncharacterized protein LOC111009242 OS=Momordica charantia OX=3673 GN=LOC111009242 PE=4 SV=1) HSP 1 Score: 502.7 bits (1293), Expect = 1.1e-138 Identity = 258/296 (87.16%), Postives = 281/296 (94.93%), Query Frame = 0
BLAST of Carg17342 vs. ExPASy TrEMBL
Match: A0A0A0L588 (TOG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G154330 PE=4 SV=1) HSP 1 Score: 496.9 bits (1278), Expect = 5.9e-137 Identity = 260/296 (87.84%), Postives = 277/296 (93.58%), Query Frame = 0
BLAST of Carg17342 vs. ExPASy TrEMBL
Match: A0A5D3CW98 (Protein FAM179B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001050 PE=4 SV=1) HSP 1 Score: 496.5 bits (1277), Expect = 7.7e-137 Identity = 259/296 (87.50%), Postives = 277/296 (93.58%), Query Frame = 0
BLAST of Carg17342 vs. TAIR 10
Match: AT4G15830.1 (ARM repeat superfamily protein ) HSP 1 Score: 326.6 bits (836), Expect = 2.0e-89 Identity = 177/301 (58.80%), Postives = 233/301 (77.41%), Query Frame = 0
BLAST of Carg17342 vs. TAIR 10
Match: AT3G01450.1 (ARM repeat superfamily protein ) HSP 1 Score: 217.6 bits (553), Expect = 1.3e-56 Identity = 125/284 (44.01%), Postives = 187/284 (65.85%), Query Frame = 0
BLAST of Carg17342 vs. TAIR 10
Match: AT5G14790.1 (ARM repeat superfamily protein ) HSP 1 Score: 204.5 bits (519), Expect = 1.2e-52 Identity = 118/281 (41.99%), Postives = 187/281 (66.55%), Query Frame = 0
BLAST of Carg17342 vs. TAIR 10
Match: AT3G18530.1 (ARM repeat superfamily protein ) HSP 1 Score: 109.0 bits (271), Expect = 6.6e-24 Identity = 73/207 (35.27%), Postives = 121/207 (58.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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