Carg17338 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg17338
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTranslationally-controlled tumor protein homolog
LocationCarg_Chr06: 9269345 .. 9270514 (-)
RNA-Seq ExpressionCarg17338
SyntenyCarg17338
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGGTGTACATGGATTCGTTCCCTTCATTGGTGACAAAGCAATTGTTTTTAATTTTGATATCAGGTGACGAGCTTCTCTCGGATTCGTTCCCATACAAGGAACTCGAGAATGGAATGATCTGGGAAGTTGAGGGAAAGGTCAGTAGACTTTGTTTATTGTATGCTTTTTCACTTTTTCATGGAAAGAAAACGTCGTGTCTTAATGCTACCGAGTATATAGTTACTGAAACTAAGTGTTAGCCTAACTGAATGAGTATTCAGCACAATACTTTACTACTTGAATCATTATGCTGCAGTGGGTCGTTCAAGGAGCGGTCGATGTGGACATTGGTGCAAATCCTTCTGCTGAAGGTGACGGTGAGGATGAAGGGGTTGATGACCAAGCTGTGAAGGTGGTTGACATTGTCGACACCTTCAGGCTTCAGGTAGGCATGCCTTCTGGTTAAGACATTCAAGGATTGTTGCAAGTTTTTAATTTTAGGGCATACTTGGGAGTGATTTTATTCAAATCACTGCTATTAAATGTTTCCCATACTTGACCTAAATCTATTTTTCTTTCCACTTTGGGATTCCAGGAGCAACCTACCATGGACAAGAAGCAGTTCATTGCATACATTAAGAAGTTTATCAAATTGCTGACACCTAAGCTGGAAGGAGAGAAACAGGAGGCATTTAAGAAGAACATTGAAGGAGCAACTAAGTTTCTGCTTCCAAAGCTCAAGGACTTCCAGTTGTAAGTACTTCCCTTTGTTTAGGCTATCTTTTATTGGCATTACATCTTTAGTAATAGAAATATTTGAACTCAACACAGCAAACCAAATCTTACCATTTGTGATAATTTACGTTCTTTGTATTTTAACATTGCTCTTGAACACCCTTTTTTTGAATCAATATGTGATGGATGGATGAAACCGGAGCGTTCGAGCTTTTAGTGCTTCTCCTAAAAGCAGCACTTACAGAACCTAGTGTTTTTAGAATTTTCAATATTCTCGAAGTTTTAAGTTTTCTTATCATTAGAATGATTCCTAATTGTATTATATGTTCTTTTGCAGCTTCGTGGGAGAGAGCATGCATGACGATTCCTGCATCGTGTTTGCATACTACAGGGAAGGAGCCACTGACCCAACATTTTTATACCTTGCCCCAGCTTTGAAGGAAGTCAAGTGCTGA

mRNA sequence

TTGGTGTACATGGATTCGTTCCCTTCATTGGTGACAAAGCAATTGTTTTTAATTTTGATATCAGGTGACGAGCTTCTCTCGGATTCGTTCCCATACAAGGAACTCGAGAATGGAATGATCTGGGAAGTTGAGGGAAAGTGGGTCGTTCAAGGAGCGGTCGATGTGGACATTGGTGCAAATCCTTCTGCTGAAGGTGACGGTGAGGATGAAGGGGTTGATGACCAAGCTGTGAAGGTGGTTGACATTGTCGACACCTTCAGGCTTCAGGAGCAACCTACCATGGACAAGAAGCAGTTCATTGCATACATTAAGAAGTTTATCAAATTGCTGACACCTAAGCTGGAAGGAGAGAAACAGGAGGCATTTAAGAAGAACATTGAAGGAGCAACTAAGTTTCTGCTTCCAAAGCTCAAGGACTTCCAGTTCTTCGTGGGAGAGAGCATGCATGACGATTCCTGCATCGTGTTTGCATACTACAGGGAAGGAGCCACTGACCCAACATTTTTATACCTTGCCCCAGCTTTGAAGGAAGTCAAGTGCTGA

Coding sequence (CDS)

TTGGTGTACATGGATTCGTTCCCTTCATTGGTGACAAAGCAATTGTTTTTAATTTTGATATCAGGTGACGAGCTTCTCTCGGATTCGTTCCCATACAAGGAACTCGAGAATGGAATGATCTGGGAAGTTGAGGGAAAGTGGGTCGTTCAAGGAGCGGTCGATGTGGACATTGGTGCAAATCCTTCTGCTGAAGGTGACGGTGAGGATGAAGGGGTTGATGACCAAGCTGTGAAGGTGGTTGACATTGTCGACACCTTCAGGCTTCAGGAGCAACCTACCATGGACAAGAAGCAGTTCATTGCATACATTAAGAAGTTTATCAAATTGCTGACACCTAAGCTGGAAGGAGAGAAACAGGAGGCATTTAAGAAGAACATTGAAGGAGCAACTAAGTTTCTGCTTCCAAAGCTCAAGGACTTCCAGTTCTTCGTGGGAGAGAGCATGCATGACGATTCCTGCATCGTGTTTGCATACTACAGGGAAGGAGCCACTGACCCAACATTTTTATACCTTGCCCCAGCTTTGAAGGAAGTCAAGTGCTGA

Protein sequence

LVYMDSFPSLVTKQLFLILISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLKDFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC
Homology
[Close]
BLAST of Carg17338 vs. NCBI nr
Match: KAG7028984.1 (Translationally-controlled tumor protein-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 360.9 bits (925), Expect = 6.3e-96
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0 

Query: 1   LVYMDSFPSLVTKQLFLILISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGAN 60
           LVYMDSFPSLVTKQLFLILISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGAN
Sbjct: 1   LVYMDSFPSLVTKQLFLILISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGAN 60

Query: 61  PSAEGDGEDEGVDDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQE 120
           PSAEGDGEDEGVDDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQE
Sbjct: 61  PSAEGDGEDEGVDDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQE 120

Query: 121 AFKKNIEGATKFLLPKLKDFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 180
           AFKKNIEGATKFLLPKLKDFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC
Sbjct: 121 AFKKNIEGATKFLLPKLKDFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 180

[Close]
BLAST of Carg17338 vs. NCBI nr
Match: XP_022937958.1 (translationally-controlled tumor protein homolog [Cucurbita moschata] >XP_022973732.1 translationally-controlled tumor protein homolog [Cucurbita maxima] >XP_022975167.1 translationally-controlled tumor protein homolog [Cucurbita maxima] >XP_023539947.1 translationally-controlled tumor protein homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 326.2 bits (835), Expect = 1.7e-85
Identity = 160/162 (98.77%), Postives = 162/162 (100.00%), Query Frame = 0 

Query: 19  LISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 78
           L++GDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK
Sbjct: 7   LLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 66

Query: 79  VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 138
           VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK
Sbjct: 67  VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 126

Query: 139 DFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 181
           DFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC
Sbjct: 127 DFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 168

[Close]
BLAST of Carg17338 vs. NCBI nr
Match: Q2PS27.1 (RecName: Full=Translationally-controlled tumor protein homolog; Short=TCTP; AltName: Full=CmTCTP [Cucurbita maxima] >ABC02401.1 translationally controlled tumor protein [Cucurbita maxima])

HSP 1 Score: 324.7 bits (831), Expect = 5.0e-85
Identity = 159/162 (98.15%), Postives = 162/162 (100.00%), Query Frame = 0 

Query: 19  LISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 78
           L++GDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK
Sbjct: 7   LLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 66

Query: 79  VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 138
           VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK
Sbjct: 67  VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 126

Query: 139 DFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 181
           DF+FFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC
Sbjct: 127 DFRFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 168

[Close]
BLAST of Carg17338 vs. NCBI nr
Match: KAG6597527.1 (Translationally-controlled tumor protein-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 315.8 bits (808), Expect = 2.3e-82
Identity = 156/162 (96.30%), Postives = 159/162 (98.15%), Query Frame = 0 

Query: 19  LISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 78
           L+SGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK
Sbjct: 7   LLSGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 66

Query: 79  VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 138
           VVDIVDTFRLQEQP MDKKQFIAYIKKFIKLLTPKLE EKQEA KKNIEGATKFLLPKLK
Sbjct: 67  VVDIVDTFRLQEQPAMDKKQFIAYIKKFIKLLTPKLEEEKQEALKKNIEGATKFLLPKLK 126

Query: 139 DFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 181
           DFQFFVGESM+D+SCIVFAYYREGATDPTFLYLAPALKEVKC
Sbjct: 127 DFQFFVGESMNDESCIVFAYYREGATDPTFLYLAPALKEVKC 168

[Close]
BLAST of Carg17338 vs. NCBI nr
Match: XP_022956345.1 (translationally-controlled tumor protein homolog [Cucurbita moschata] >XP_023526154.1 translationally-controlled tumor protein homolog [Cucurbita pepo subsp. pepo] >KAG6582209.1 Translationally-controlled tumor protein-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018608.1 Translationally-controlled tumor protein-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 299.7 bits (766), Expect = 1.7e-77
Identity = 146/162 (90.12%), Postives = 155/162 (95.68%), Query Frame = 0 

Query: 19  LISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 78
           L+SGDELLSDSFPYKE+ENGMIWEV+GKWVVQGAVDVDIGANPSAEG GEDEGVDDQAVK
Sbjct: 7   LLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGVDDQAVK 66

Query: 79  VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 138
           VVDIVDTFRLQEQP +DKK FIAYIKK+IKL+TPKLEGEKQEAFKKNIEGATK+LL KLK
Sbjct: 67  VVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKYLLAKLK 126

Query: 139 DFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 181
           D QFFVGESMHDDS +VFAYY+EGATDPTFLYLAP LKEVKC
Sbjct: 127 DLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 168

[Close]
BLAST of Carg17338 vs. ExPASy Swiss-Prot
Match: Q2PS27 (Translationally-controlled tumor protein homolog OS=Cucurbita maxima OX=3661 GN=TCTP PE=2 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 6.6e-88
Identity = 159/162 (98.15%), Postives = 162/162 (100.00%), Query Frame = 0 

Query: 19  LISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 78
           L++GDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK
Sbjct: 7   LLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 66

Query: 79  VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 138
           VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK
Sbjct: 67  VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 126

Query: 139 DFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 181
           DF+FFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC
Sbjct: 127 DFRFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 168

[Close]
BLAST of Carg17338 vs. ExPASy Swiss-Prot
Match: P43349 (Translationally-controlled tumor protein homolog OS=Solanum tuberosum OX=4113 GN=TCTP PE=2 SV=2)

HSP 1 Score: 286.2 bits (731), Expect = 2.6e-76
Identity = 135/162 (83.33%), Postives = 150/162 (92.59%), Query Frame = 0 

Query: 19  LISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 78
           L++GDELLSDSFPYKE++NGM+WEV+GKWVVQGAVDV+IGANPSAEG GEDEGVDDQAVK
Sbjct: 7   LLTGDELLSDSFPYKEIQNGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGVDDQAVK 66

Query: 79  VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 138
           VVDIVDTFRLQEQP  DKKQF+ YIK++IK LTPKLEGE QEAFKKNIE ATKFLL KLK
Sbjct: 67  VVDIVDTFRLQEQPAFDKKQFVTYIKRYIKNLTPKLEGEAQEAFKKNIESATKFLLSKLK 126

Query: 139 DFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 181
           DFQFFVGE MHDDS +VFAYY++G+ DPTFLYLAP LKE+KC
Sbjct: 127 DFQFFVGEGMHDDSALVFAYYKDGSADPTFLYLAPGLKEIKC 168

[Close]
BLAST of Carg17338 vs. ExPASy Swiss-Prot
Match: Q9M5I8 (Translationally-controlled tumor protein homolog OS=Cucumis melo OX=3656 GN=TCTP PE=2 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 6.4e-75
Identity = 136/162 (83.95%), Postives = 150/162 (92.59%), Query Frame = 0 

Query: 19  LISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 78
           L+SGDELLSDSFPYKE+ENGMIWEVEGKWVV+GAVDVDIGANPSAEG GEDEGVDDQAVK
Sbjct: 7   LVSGDELLSDSFPYKEIENGMIWEVEGKWVVKGAVDVDIGANPSAEGGGEDEGVDDQAVK 66

Query: 79  VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 138
           VVDIVDTFRLQEQP+MDKK F++ IKK+IK LTP L+GE+QEAFK  IEGA K+LLPK+K
Sbjct: 67  VVDIVDTFRLQEQPSMDKKVFLSCIKKYIKKLTPLLQGEQQEAFKNKIEGAVKYLLPKVK 126

Query: 139 DFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 181
           D QFFVGESM DDS +VFAYY+EGATDPTFLY+AP LKEVKC
Sbjct: 127 DLQFFVGESMADDSAMVFAYYKEGATDPTFLYIAPGLKEVKC 168

[Close]
BLAST of Carg17338 vs. ExPASy Swiss-Prot
Match: Q9ZSW9 (Translationally-controlled tumor protein homolog OS=Hevea brasiliensis OX=3981 GN=TCTP PE=2 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.4e-74
Identity = 136/162 (83.95%), Postives = 147/162 (90.74%), Query Frame = 0 

Query: 19  LISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 78
           L++GDELLSDSFPYKE+ NG++WEVEGKWVVQGAVDVDIGANPSAEG  EDEGVDDQAVK
Sbjct: 7   LLTGDELLSDSFPYKEIHNGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVK 66

Query: 79  VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 138
           VVDIVDTFRLQEQP  DKKQF+ Y+K+FIKLLTPKL+ EKQE+FKKNIEGATKFLL KL 
Sbjct: 67  VVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLDEEKQESFKKNIEGATKFLLSKLS 126

Query: 139 DFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 181
           D QFFVGESMHDD  +VFAYYR GATDPTFLY A ALKEVKC
Sbjct: 127 DLQFFVGESMHDDGSLVFAYYRGGATDPTFLYFAYALKEVKC 168

[Close]
BLAST of Carg17338 vs. ExPASy Swiss-Prot
Match: Q9M5G3 (Translationally-controlled tumor protein homolog OS=Hordeum vulgare OX=4513 GN=TCTP PE=2 SV=2)

HSP 1 Score: 275.8 bits (704), Expect = 3.5e-73
Identity = 133/161 (82.61%), Postives = 145/161 (90.06%), Query Frame = 0 

Query: 20  ISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVKV 79
           +SGDELLSDSFPY+ELENG++WEV+G WVVQGAVDVDIGANPSAEG GEDEGVDDQAVKV
Sbjct: 8   LSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGEDEGVDDQAVKV 67

Query: 80  VDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLKD 139
           VDIVDTFRLQEQP  DKKQFIAYIK++IK LT KLEGE+ +AFKKN+E ATK+LL KLKD
Sbjct: 68  VDIVDTFRLQEQPAFDKKQFIAYIKRYIKNLTAKLEGEELDAFKKNVESATKYLLSKLKD 127

Query: 140 FQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 181
            QFFVGESMHDD  +VFAYYREGA DPTFLY A  LKEVKC
Sbjct: 128 LQFFVGESMHDDGSVVFAYYREGAADPTFLYFAHGLKEVKC 168

[Close]
BLAST of Carg17338 vs. ExPASy TrEMBL
Match: A0A6J1ICB3 (translationally-controlled tumor protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111474201 PE=3 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 8.3e-86
Identity = 160/162 (98.77%), Postives = 162/162 (100.00%), Query Frame = 0 

Query: 19  LISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 78
           L++GDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK
Sbjct: 7   LLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 66

Query: 79  VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 138
           VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK
Sbjct: 67  VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 126

Query: 139 DFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 181
           DFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC
Sbjct: 127 DFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 168

[Close]
BLAST of Carg17338 vs. ExPASy TrEMBL
Match: A0A6J1FHH5 (translationally-controlled tumor protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111444190 PE=3 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 8.3e-86
Identity = 160/162 (98.77%), Postives = 162/162 (100.00%), Query Frame = 0 

Query: 19  LISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 78
           L++GDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK
Sbjct: 7   LLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 66

Query: 79  VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 138
           VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK
Sbjct: 67  VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 126

Query: 139 DFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 181
           DFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC
Sbjct: 127 DFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 168

[Close]
BLAST of Carg17338 vs. ExPASy TrEMBL
Match: A0A6J1GXJ9 (translationally-controlled tumor protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111458073 PE=3 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 8.4e-78
Identity = 146/162 (90.12%), Postives = 155/162 (95.68%), Query Frame = 0 

Query: 19  LISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 78
           L+SGDELLSDSFPYKE+ENGMIWEV+GKWVVQGAVDVDIGANPSAEG GEDEGVDDQAVK
Sbjct: 7   LLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGVDDQAVK 66

Query: 79  VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 138
           VVDIVDTFRLQEQP +DKK FIAYIKK+IKL+TPKLEGEKQEAFKKNIEGATK+LL KLK
Sbjct: 67  VVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKYLLAKLK 126

Query: 139 DFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 181
           D QFFVGESMHDDS +VFAYY+EGATDPTFLYLAP LKEVKC
Sbjct: 127 DLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 168

[Close]
BLAST of Carg17338 vs. ExPASy TrEMBL
Match: A0A5J5C257 (TCTP domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_000618 PE=3 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 3.9e-75
Identity = 141/162 (87.04%), Postives = 149/162 (91.98%), Query Frame = 0 

Query: 19  LISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 78
           L++GDELLSDSFPYKE +NGM+WEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK
Sbjct: 7   LLTGDELLSDSFPYKETQNGMLWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 66

Query: 79  VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 138
           VVDIVDTFRLQEQP  DKKQF+AYIKK+IKLLTPKLE EKQE FKKNIEGATKFLL KL 
Sbjct: 67  VVDIVDTFRLQEQPAFDKKQFVAYIKKYIKLLTPKLEAEKQEEFKKNIEGATKFLLLKLS 126

Query: 139 DFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 181
           D QFFVGESMHDDS +VFAYY+EGATDPTFLY    LKEVKC
Sbjct: 127 DLQFFVGESMHDDSSLVFAYYKEGATDPTFLYFGHGLKEVKC 168

[Close]
BLAST of Carg17338 vs. ExPASy TrEMBL
Match: A0A5N5L5K3 (TCTP domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_014914 PE=3 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 8.6e-75
Identity = 140/161 (86.96%), Postives = 151/161 (93.79%), Query Frame = 0 

Query: 20  ISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVKV 79
           +SGDELLSDSFPY+E+ENGM+WEV+GKWVVQGAVDVDIGANPSAEG GEDEGVDDQAVKV
Sbjct: 8   LSGDELLSDSFPYREIENGMLWEVDGKWVVQGAVDVDIGANPSAEG-GEDEGVDDQAVKV 67

Query: 80  VDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLKD 139
           VDIVDTFRLQEQP  DKKQF+AYIKKFIKLLTPKLEGEKQE FKKNIEGATKFLL K+K+
Sbjct: 68  VDIVDTFRLQEQPPFDKKQFVAYIKKFIKLLTPKLEGEKQEEFKKNIEGATKFLLSKIKE 127

Query: 140 FQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 181
            QFFVGESMHDD C+VFAYY++GA DPTFLY A ALKEVKC
Sbjct: 128 LQFFVGESMHDDGCLVFAYYKDGAADPTFLYFALALKEVKC 167

[Close]
BLAST of Carg17338 vs. TAIR 10
Match: AT3G16640.1 (translationally controlled tumor protein )

HSP 1 Score: 265.8 bits (678), Expect = 2.6e-71
Identity = 129/162 (79.63%), Postives = 141/162 (87.04%), Query Frame = 0 

Query: 19  LISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 78
           L++GDELLSDSFPYKE+ENG++WEVEGKWV  GAVDV+IGANPSAE  GEDEGVDD   K
Sbjct: 7   LLTGDELLSDSFPYKEIENGILWEVEGKWVTVGAVDVNIGANPSAEEGGEDEGVDDSTQK 66

Query: 79  VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 138
           VVDIVDTFRLQEQPT DKK FIAYIKK+IKLLTPKL  E Q  FKK IEGATKFLLP+L 
Sbjct: 67  VVDIVDTFRLQEQPTYDKKGFIAYIKKYIKLLTPKLSEEDQAVFKKGIEGATKFLLPRLS 126

Query: 139 DFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 181
           DFQFFVGE MHDDS +VFAYY+EG+T+PTFLY A  LKEVKC
Sbjct: 127 DFQFFVGEGMHDDSTLVFAYYKEGSTNPTFLYFAHGLKEVKC 168

[Close]
BLAST of Carg17338 vs. TAIR 10
Match: AT3G05540.1 (Methionine sulfoxide reductase (MSS4-like) family protein )

HSP 1 Score: 256.1 bits (653), Expect = 2.0e-68
Identity = 123/163 (75.46%), Postives = 145/163 (88.96%), Query Frame = 0 

Query: 19  LISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 78
           +++GDELLSDSFPYKE+ENGM+WEVEGKWVV+GA+D DIGANP  EG GEDEGVDDQAVK
Sbjct: 7   ILTGDELLSDSFPYKEIENGMLWEVEGKWVVKGAMDFDIGANPGEEG-GEDEGVDDQAVK 66

Query: 79  VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 138
           VVDI+DTFRLQEQP+ DKKQF+ ++K++IK L+PKL+ E QE FKK+IE ATKFL+ KLK
Sbjct: 67  VVDIIDTFRLQEQPSFDKKQFVMFMKRYIKQLSPKLDSENQELFKKHIESATKFLMSKLK 126

Query: 139 DFQFFVGESMH-DDSCIVFAYYREGATDPTFLYLAPALKEVKC 181
           DFQFFVGESM  ++  +VFAYYREGATDPTFLYLA  LKE+KC
Sbjct: 127 DFQFFVGESMEGEEGSLVFAYYREGATDPTFLYLAYGLKEIKC 168

The following BLAST results are available for this feature:
BLAST of Carg17338 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7028984.16.3e-96100.00Translationally-controlled tumor protein-like protein, partial [Cucurbita argyro... [more]
XP_022937958.11.7e-8598.77translationally-controlled tumor protein homolog [Cucurbita moschata] >XP_022973... [more]
Q2PS27.15.0e-8598.15RecName: Full=Translationally-controlled tumor protein homolog; Short=TCTP; AltN... [more]
KAG6597527.12.3e-8296.30Translationally-controlled tumor protein-like protein, partial [Cucurbita argyro... [more]
XP_022956345.11.7e-7790.12translationally-controlled tumor protein homolog [Cucurbita moschata] >XP_023526... [more]
BLAST of Carg17338 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q2PS276.6e-8898.15Translationally-controlled tumor protein homolog OS=Cucurbita maxima OX=3661 GN=... [more]
P433492.6e-7683.33Translationally-controlled tumor protein homolog OS=Solanum tuberosum OX=4113 GN... [more]
Q9M5I86.4e-7583.95Translationally-controlled tumor protein homolog OS=Cucumis melo OX=3656 GN=TCTP... [more]
Q9ZSW91.4e-7483.95Translationally-controlled tumor protein homolog OS=Hevea brasiliensis OX=3981 G... [more]
Q9M5G33.5e-7382.61Translationally-controlled tumor protein homolog OS=Hordeum vulgare OX=4513 GN=T... [more]
BLAST of Carg17338 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1ICB38.3e-8698.77translationally-controlled tumor protein homolog OS=Cucurbita maxima OX=3661 GN=... [more]
A0A6J1FHH58.3e-8698.77translationally-controlled tumor protein homolog OS=Cucurbita moschata OX=3662 G... [more]
A0A6J1GXJ98.4e-7890.12translationally-controlled tumor protein homolog OS=Cucurbita moschata OX=3662 G... [more]
A0A5J5C2573.9e-7587.04TCTP domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_000618 PE=3 ... [more]
A0A5N5L5K38.6e-7586.96TCTP domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_014914 PE=... [more]
BLAST of Carg17338 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G16640.12.6e-7179.63translationally controlled tumor protein [more]
AT3G05540.12.0e-6875.46Methionine sulfoxide reductase (MSS4-like) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018105Translationally controlled tumour proteinPRINTSPR01653TCTPROTEINcoord: 13..33
score: 46.6
coord: 72..91
score: 60.36
coord: 58..69
score: 65.48
IPR018105Translationally controlled tumour proteinPFAMPF00838TCTPcoord: 18..176
e-value: 1.8E-52
score: 178.0
IPR018105Translationally controlled tumour proteinPANTHERPTHR11991TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATEDcoord: 18..180
IPR011323Mss4/translationally controlled tumour-associated TCTPGENE3D2.170.150.10Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain Acoord: 15..180
e-value: 3.2E-52
score: 179.2
NoneNo IPR availablePANTHERPTHR11991:SF11TRANSLATIONALLY-CONTROLLED TUMOR PROTEIN HOMOLOGcoord: 18..180
IPR018103Translationally controlled tumour protein, conserved sitePROSITEPS01003TCTP_2coord: 137..159
IPR034737Translationally controlled tumour protein (TCTP) domainPROSITEPS51797TCTP_3coord: 9..180
score: 53.825871
IPR011057Mss4-like superfamilySUPERFAMILY51316Mss4-likecoord: 19..180

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg17338-RACarg17338-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005737 cytoplasm
molecular_function GO:0005509 calcium ion binding