Carg17324 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg17324
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	BSD domain-containing protein
Location	Carg_Chr18: 10504348 .. 10506873 (-)
RNA-Seq Expression	Carg17324
Synteny	Carg17324

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGTTAATGGAGGATTTATGGAAGAGAGCGAAATCCTTCGCAGAAGAAGCGGCGAAGAAGTCACAGACCTTAACGTCGACCTCCACACTCACTGAATTGGTCTCTGAAACTGCCAAAAAGTCCAAGGAGCTTGCTGCTGAGGCCTCCAAGACTGCTGATCTCATCAAAACAGCCGCCATCAAGCAGGCCGATCATCTCAAATCACTCAACGTTTCCGACATTATACCTCCTCAACTACCTTCCATTTCCATCCCCAATTTCTCCGCTCCCTCGCCGCATTCTCAGTCTGAGCTCGAGAAGTTTGGCCTCAATGACGATCTGAGAGAGTTTGTTAGGGGCTTTACTTCAACTACTTTCAAGAACTTTCCGATCCAAGGTAGAAGTAAATTCGGGGAATGTGATGTTAATTTTCGGATTGGAAATTGTTCTATGGTTTTAACATGCGTAATTGACGTGGATTGTTTTGATGATTAATATAGACGAACCGGAGGCGTCTGACGTTGCGGTTACGGCTTCTAATGTGCGTAAGGATCTGACGGAATGGCAAGAACAGCACGCCACGCTGGTTCTCACCAATGTCAAGGTGAGACGAAATGTTTTAATTCATTGTAATTTTGATTGAATTCGATTAAATCATGCACCGTTTTGCTAGGAATTTACTGTCCCCTACTGATTTAGGTTCGTTGATTTCGAATTGTTTATCATTCTGGGATATTGCGCTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATGAAACAAATTTTCATAGAGAATCGAAAAAAGTACAGTTGATACGGTGTGAACCAAGCAGTCCAATTCAACTAAATCACGGTCAGGCTGAAACTTGGTTTTGATTTTTCTGCCCATTGCTTCTCTAAATTTCTCTATTTGATCTTTCTGGTTCTAAACTTCATTTGAATCAATGCATGTCTGGTGCTTTACCCGAAAAAAGGAAAAGAAGGAACTCTTGCTACTTTCAAAAGCTATTGTTGGATATGACTTTAAAAATCAGAAGTCTGACGTCCAGCTTCTTCTGTATGTTTAATTTGTGATGTGGTCTCCCACATGCTAATCAGAGTTGGATCTCATTCTCTTTATCAAGAACTTATGCGTCAAGGAAGTATTGAAAAGAAGCATATGGGAAAAAAAAAACCCGTTCGTATAGTAAAACTTTAAAAACATGCCTACTCAGTACTCGTTGCCTTTACACTTTGGTGATCTTCATTTCTCTCATGTCAAATGATTAAAACACCACATCTCATCCATATATAACTTTTATAGCTTTCAGAAGTTTGCTGAATAGGACAACTACAATTGCTTAATGCTTGTTCCTTTAACACCAATCAATAAAAACACGCCAACTGTTGACCCTAGATGATGCATAAATCACGAAAGATTGCACCCTGATGGTACACATGAATTTTAGTTGCACTTGATTAATCTGTTAGTTCAGAGTTGTTAACCTTTGATTGTCTTCATCAGCAAGAGTAGATCGTCGCCTTTTCATTTGTTCCTGGACATGATACATCCAAATTACAAATTTGAAATGGCCCAATATCTCAACTCTGTTGCAGGAAATTTCCAGATTAAGATATGAACTATGTCCAAGAATTATGAAAGAAAGGATATTCTGGAGGATATATTTTACACTTGTCAGCAGTCATGTTGTTCCGTAAGTTGCATTTCTTTTAATTGGAGCTCTTTCTGTCTAATCTCCAGTTCAGTCTTGCATGCTTCGTTGTTTCTTATTGTAAGTTGGAAGAAATATGCCACCACTTGCCAAGCATCTAACATTGAGGTGTTTCTACCATCTCGAGAAATTTACTTGTAGACTAACCATACTGGAAAATAGTTTCAAGGGTTCGACGTGCTTGTTTTTCATCACTTTTTATTTAACCTCCTCACTGAATTATTGAAGCATCTGATTTTCTGTTGATTGTATACACCAATTTGGCTTTACATATTAAATACAGGGTTTTGGTTTTGGTTTTTCTTATTTAAGAAAAGCATTTTAGATTAGTACATTTGCAGGTATAAGAATTTTTAGGAATTATGTAAGTTATATTATTGTGATATAGCCCGACGTAATATACCATTTAGAATAAATATCACATTGGAGAATGAATGGCTGTCAAGTCGCTGCACCTTTATATATATATATCTTATCACCAAAGGATTCTGTCTTAGTAGTATACACTCTTAATTGTTTAAAAAACACAGATACGAGAAGAAATACATGGAAGAGATTAAGCTGAAGTCTGAAGAACAAAGAACAGCTGATGAAACCAAGCAAACTCCGTTGGTTGGTTCCTCTGAAAAAGTTGAAGTGGCGCAAAAGAACCTGAAGGGTAAAACTTCCCCATCGCTGTCTACTGATCAAGACTTGGATACTTTTCTTTTGGGAGATCTTGAAGACAGTGATGGGGGAGGTGCAGGTAAATCCTCTCCTCGATTCTGATTCATACCCCGATTTAACAAATTTCAATATTCT

mRNA sequence

GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGTTAATGGAGGATTTATGGAAGAGAGCGAAATCCTTCGCAGAAGAAGCGGCGAAGAAGTCACAGACCTTAACGTCGACCTCCACACTCACTGAATTGGTCTCTGAAACTGCCAAAAAGTCCAAGGAGCTTGCTGCTGAGGCCTCCAAGACTGCTGATCTCATCAAAACAGCCGCCATCAAGCAGGCCGATCATCTCAAATCACTCAACGTTTCCGACATTATACCTCCTCAACTACCTTCCATTTCCATCCCCAATTTCTCCGCTCCCTCGCCGCATTCTCAGTCTGAGCTCGAGAAGTTTGGCCTCAATGACGATCTGAGAGAGTTTGTTAGGGGCTTTACTTCAACTACTTTCAAGAACTTTCCGATCCAAGACGAACCGGAGGCGTCTGACGTTGCGGTTACGGCTTCTAATGTGCGTAAGGATCTGACGGAATGGCAAGAACAGCACGCCACGCTGGTTCTCACCAATGTCAAGGAAATTTCCAGATTAAGATATGAACTATGTCCAAGAATTATGAAAGAAAGGATATTCTGGAGGATATATTTTACACTTGTCAGCAGTCATGTTGTTCCATACGAGAAGAAATACATGGAAGAGATTAAGCTGAAGTCTGAAGAACAAAGAACAGCTGATGAAACCAAGCAAACTCCGTTGGTTGGTTCCTCTGAAAAAGTTGAAGTGGCGCAAAAGAACCTGAAGGGTAAAACTTCCCCATCGCTGTCTACTGATCAAGACTTGGATACTTTTCTTTTGGGAGATCTTGAAGACAGTGATGGGGGAGGTGCAGGTAAATCCTCTCCTCGATTCTGATTCATACCCCGATTTAACAAATTTCAATATTCT

Coding sequence (CDS)

ATGGAGGATTTATGGAAGAGAGCGAAATCCTTCGCAGAAGAAGCGGCGAAGAAGTCACAGACCTTAACGTCGACCTCCACACTCACTGAATTGGTCTCTGAAACTGCCAAAAAGTCCAAGGAGCTTGCTGCTGAGGCCTCCAAGACTGCTGATCTCATCAAAACAGCCGCCATCAAGCAGGCCGATCATCTCAAATCACTCAACGTTTCCGACATTATACCTCCTCAACTACCTTCCATTTCCATCCCCAATTTCTCCGCTCCCTCGCCGCATTCTCAGTCTGAGCTCGAGAAGTTTGGCCTCAATGACGATCTGAGAGAGTTTGTTAGGGGCTTTACTTCAACTACTTTCAAGAACTTTCCGATCCAAGACGAACCGGAGGCGTCTGACGTTGCGGTTACGGCTTCTAATGTGCGTAAGGATCTGACGGAATGGCAAGAACAGCACGCCACGCTGGTTCTCACCAATGTCAAGGAAATTTCCAGATTAAGATATGAACTATGTCCAAGAATTATGAAAGAAAGGATATTCTGGAGGATATATTTTACACTTGTCAGCAGTCATGTTGTTCCATACGAGAAGAAATACATGGAAGAGATTAAGCTGAAGTCTGAAGAACAAAGAACAGCTGATGAAACCAAGCAAACTCCGTTGGTTGGTTCCTCTGAAAAAGTTGAAGTGGCGCAAAAGAACCTGAAGGGTAAAACTTCCCCATCGCTGTCTACTGATCAAGACTTGGATACTTTTCTTTTGGGAGATCTTGAAGACAGTGATGGGGGAGGTGCAGGTAAATCCTCTCCTCGATTCTGA

Protein sequence

MEDLWKRAKSFAEEAAKKSQTLTSTSTLTELVSETAKKSKELAAEASKTADLIKTAAIKQADHLKSLNVSDIIPPQLPSISIPNFSAPSPHSQSELEKFGLNDDLREFVRGFTSTTFKNFPIQDEPEASDVAVTASNVRKDLTEWQEQHATLVLTNVKEISRLRYELCPRIMKERIFWRIYFTLVSSHVVPYEKKYMEEIKLKSEEQRTADETKQTPLVGSSEKVEVAQKNLKGKTSPSLSTDQDLDTFLLGDLEDSDGGGAGKSSPRF

Homology

[Close]

BLAST of Carg17324 vs. NCBI nr
Match: KAG7013088.1 (hypothetical protein SDJN02_25844 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 507.3 bits (1305), Expect = 8.1e-140
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MEDLWKRAKSFAEEAAKKSQTLTSTSTLTELVSETAKKSKELAAEASKTADLIKTAAIKQ 60
           MEDLWKRAKSFAEEAAKKSQTLTSTSTLTELVSETAKKSKELAAEASKTADLIKTAAIKQ
Sbjct: 1   MEDLWKRAKSFAEEAAKKSQTLTSTSTLTELVSETAKKSKELAAEASKTADLIKTAAIKQ 60

Query: 61  ADHLKSLNVSDIIPPQLPSISIPNFSAPSPHSQSELEKFGLNDDLREFVRGFTSTTFKNF 120
           ADHLKSLNVSDIIPPQLPSISIPNFSAPSPHSQSELEKFGLNDDLREFVRGFTSTTFKNF
Sbjct: 61  ADHLKSLNVSDIIPPQLPSISIPNFSAPSPHSQSELEKFGLNDDLREFVRGFTSTTFKNF 120

Query: 121 PIQDEPEASDVAVTASNVRKDLTEWQEQHATLVLTNVKEISRLRYELCPRIMKERIFWRI 180
           PIQDEPEASDVAVTASNVRKDLTEWQEQHATLVLTNVKEISRLRYELCPRIMKERIFWRI
Sbjct: 121 PIQDEPEASDVAVTASNVRKDLTEWQEQHATLVLTNVKEISRLRYELCPRIMKERIFWRI 180

Query: 181 YFTLVSSHVVPYEKKYMEEIKLKSEEQRTADETKQTPLVGSSEKVEVAQKNLKGKTSPSL 240
           YFTLVSSHVVPYEKKYMEEIKLKSEEQRTADETKQTPLVGSSEKVEVAQKNLKGKTSPSL
Sbjct: 181 YFTLVSSHVVPYEKKYMEEIKLKSEEQRTADETKQTPLVGSSEKVEVAQKNLKGKTSPSL 240

Query: 241 STDQDLDTFLLGDLEDSDGGGAGKSSPRF 270
           STDQDLDTFLLGDLEDSDGGGAGKSSPRF
Sbjct: 241 STDQDLDTFLLGDLEDSDGGGAGKSSPRF 269

[Close]

BLAST of Carg17324 vs. NCBI nr
Match: KAG6574029.1 (DNA-directed RNA polymerase 2, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 494.6 bits (1272), Expect = 5.5e-136
Identity = 263/269 (97.77%), Postives = 264/269 (98.14%), Query Frame = 0


Query: 1   MEDLWKRAKSFAEEAAKKSQTLTSTSTLTELVSETAKKSKELAAEASKTADLIKTAAIKQ 60
           MEDLWKRAKSFAEEAAKKSQTLTSTSTLTELVSETAKKSKELAAEASKTADLIKTAAIKQ
Sbjct: 1   MEDLWKRAKSFAEEAAKKSQTLTSTSTLTELVSETAKKSKELAAEASKTADLIKTAAIKQ 60

Query: 61  ADHLKSLNVSDIIPPQLPSISIPNFSAPSPHSQSELEKFGLNDDLREFVRGFTSTTFKNF 120
           ADHLKSLNVSDIIPPQLPSISIPNFSAPSPHSQSELEKFGLNDDLREFVRGFTSTTFKNF
Sbjct: 61  ADHLKSLNVSDIIPPQLPSISIPNFSAPSPHSQSELEKFGLNDDLREFVRGFTSTTFKNF 120

Query: 121 PIQDEPEASDVAVTASNVRKDLTEWQEQHATLVLTNVKEISRLRYELCPRIMKERIFWRI 180
           PIQDEPEASDVAVTASNVRKDLTEWQEQHATLVLTNVKEISRLRYELCPRIMKERIFWRI
Sbjct: 121 PIQDEPEASDVAVTASNVRKDLTEWQEQHATLVLTNVKEISRLRYELCPRIMKERIFWRI 180

Query: 181 YFTLVSSHVVPYEKKYMEEIKLKSEEQRTADETKQTPLVGSSEKVEVAQKNLKGKTSPSL 240
           YFTLVSSHVVPYEKKYMEEIKLKSEEQRTADETKQTPLVGSSEKVEVAQKNLKGKTSPSL
Sbjct: 181 YFTLVSSHVVPYEKKYMEEIKLKSEEQRTADETKQTPLVGSSEKVEVAQKNLKGKTSPSL 240

Query: 241 STDQDLDTFLLGDLEDSDGGGAGKSSPRF 270
           STDQDLDTFLLGDLEDSDGGGA +    F
Sbjct: 241 STDQDLDTFLLGDLEDSDGGGADEGDESF 269

[Close]

BLAST of Carg17324 vs. NCBI nr
Match: XP_022944919.1 (uncharacterized protein LOC111449307 [Cucurbita moschata])

HSP 1 Score: 490.7 bits (1262), Expect = 7.9e-135
Identity = 260/269 (96.65%), Postives = 263/269 (97.77%), Query Frame = 0


Query: 1   MEDLWKRAKSFAEEAAKKSQTLTSTSTLTELVSETAKKSKELAAEASKTADLIKTAAIKQ 60
           MEDLWKRAKSFAEEAAKKSQTLTSTSTLTELVSETAKKSKELAAEASKTADLIKTAAIKQ
Sbjct: 1   MEDLWKRAKSFAEEAAKKSQTLTSTSTLTELVSETAKKSKELAAEASKTADLIKTAAIKQ 60

Query: 61  ADHLKSLNVSDIIPPQLPSISIPNFSAPSPHSQSELEKFGLNDDLREFVRGFTSTTFKNF 120
           ADHLKSLNVSDIIPPQLPSISIPNFSAPSPHSQSELEKFGLNDDLREFVRGFTSTTFKNF
Sbjct: 61  ADHLKSLNVSDIIPPQLPSISIPNFSAPSPHSQSELEKFGLNDDLREFVRGFTSTTFKNF 120

Query: 121 PIQDEPEASDVAVTASNVRKDLTEWQEQHATLVLTNVKEISRLRYELCPRIMKERIFWRI 180
           PIQDEPEASDVAVTASNVRKDLTEWQEQHATLVLTNVKEISRLRYELCPRIMKERIFWRI
Sbjct: 121 PIQDEPEASDVAVTASNVRKDLTEWQEQHATLVLTNVKEISRLRYELCPRIMKERIFWRI 180

Query: 181 YFTLVSSHVVPYEKKYMEEIKLKSEEQRTADETKQTPLVGSSEKVEVAQKNLKGKTSPSL 240
           YFTLVSSHV PYEKKYMEEIKLKSEEQRTADETKQTPLVGSSEKVEVA+KNLKGKTSP+L
Sbjct: 181 YFTLVSSHVAPYEKKYMEEIKLKSEEQRTADETKQTPLVGSSEKVEVAEKNLKGKTSPTL 240

Query: 241 STDQDLDTFLLGDLEDSDGGGAGKSSPRF 270
           STDQDLDTFLLGDLEDSDGGGA +    F
Sbjct: 241 STDQDLDTFLLGDLEDSDGGGADEGDESF 269

[Close]

BLAST of Carg17324 vs. NCBI nr
Match: XP_023542843.1 (uncharacterized protein LOC111802641 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 489.2 bits (1258), Expect = 2.3e-134
Identity = 260/269 (96.65%), Postives = 262/269 (97.40%), Query Frame = 0


Query: 1   MEDLWKRAKSFAEEAAKKSQTLTSTSTLTELVSETAKKSKELAAEASKTADLIKTAAIKQ 60
           MEDLWKRAKSFAEEAAKKSQTLTSTSTLTELVSETAKKSKELAAEASKTADLIKTAAIKQ
Sbjct: 1   MEDLWKRAKSFAEEAAKKSQTLTSTSTLTELVSETAKKSKELAAEASKTADLIKTAAIKQ 60

Query: 61  ADHLKSLNVSDIIPPQLPSISIPNFSAPSPHSQSELEKFGLNDDLREFVRGFTSTTFKNF 120
           ADHLKSLNVSDIIPPQLPSISIPNFSAPSPHSQSELEKFGLNDDLREFVRGFTSTTFKNF
Sbjct: 61  ADHLKSLNVSDIIPPQLPSISIPNFSAPSPHSQSELEKFGLNDDLREFVRGFTSTTFKNF 120

Query: 121 PIQDEPEASDVAVTASNVRKDLTEWQEQHATLVLTNVKEISRLRYELCPRIMKERIFWRI 180
           PIQDEPEASDVAVTASNVRKDLTEWQEQHATLVLTNVKEISRLRYELCPRIMKERIFWRI
Sbjct: 121 PIQDEPEASDVAVTASNVRKDLTEWQEQHATLVLTNVKEISRLRYELCPRIMKERIFWRI 180

Query: 181 YFTLVSSHVVPYEKKYMEEIKLKSEEQRTADETKQTPLVGSSEKVEVAQKNLKGKTSPSL 240
           YFTLVSSHV PYEKKYMEEIKLKSEEQRTADETKQTPLV SSEKVEVA+KNLKGKTSPSL
Sbjct: 181 YFTLVSSHVAPYEKKYMEEIKLKSEEQRTADETKQTPLVDSSEKVEVAEKNLKGKTSPSL 240

Query: 241 STDQDLDTFLLGDLEDSDGGGAGKSSPRF 270
           STDQDLDTFLLGDLEDSDGGGA +    F
Sbjct: 241 STDQDLDTFLLGDLEDSDGGGADEGDESF 269

[Close]

BLAST of Carg17324 vs. NCBI nr
Match: XP_022968483.1 (uncharacterized protein LOC111467710 [Cucurbita maxima])

HSP 1 Score: 482.3 bits (1240), Expect = 2.8e-132
Identity = 257/269 (95.54%), Postives = 259/269 (96.28%), Query Frame = 0


Query: 1   MEDLWKRAKSFAEEAAKKSQTLTSTSTLTELVSETAKKSKELAAEASKTADLIKTAAIKQ 60
           MEDLWKRAKSFAEEAAKKSQTLTS STLTELVSETAKKSKELAAEASKTADLIK AAIKQ
Sbjct: 1   MEDLWKRAKSFAEEAAKKSQTLTSASTLTELVSETAKKSKELAAEASKTADLIKIAAIKQ 60

Query: 61  ADHLKSLNVSDIIPPQLPSISIPNFSAPSPHSQSELEKFGLNDDLREFVRGFTSTTFKNF 120
           ADHLKSLNVSDIIPPQLPSISIPNFSAPSPHSQSELEKFGLNDDLREFVRGFTSTTFKNF
Sbjct: 61  ADHLKSLNVSDIIPPQLPSISIPNFSAPSPHSQSELEKFGLNDDLREFVRGFTSTTFKNF 120

Query: 121 PIQDEPEASDVAVTASNVRKDLTEWQEQHATLVLTNVKEISRLRYELCPRIMKERIFWRI 180
           PIQD PEASDVAVTASNVRKDLTEWQEQHATLVLTNVKEISRLRYELCPRIMKERIFWRI
Sbjct: 121 PIQDGPEASDVAVTASNVRKDLTEWQEQHATLVLTNVKEISRLRYELCPRIMKERIFWRI 180

Query: 181 YFTLVSSHVVPYEKKYMEEIKLKSEEQRTADETKQTPLVGSSEKVEVAQKNLKGKTSPSL 240
           YFTLVSSHV PYEKKYMEEIKLKSEEQRTADETKQTPLVGSSEKVEVA+KNLKGKTSPSL
Sbjct: 181 YFTLVSSHVAPYEKKYMEEIKLKSEEQRTADETKQTPLVGSSEKVEVAEKNLKGKTSPSL 240

Query: 241 STDQDLDTFLLGDLEDSDGGGAGKSSPRF 270
           S DQDLDTFLLGDLEDSDGGGA +    F
Sbjct: 241 SNDQDLDTFLLGDLEDSDGGGADEGDECF 269

[Close]

BLAST of Carg17324 vs. ExPASy TrEMBL
Match: A0A6J1FZH6 (uncharacterized protein LOC111449307 OS=Cucurbita moschata OX=3662 GN=LOC111449307 PE=4 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 3.8e-135
Identity = 260/269 (96.65%), Postives = 263/269 (97.77%), Query Frame = 0


Query: 1   MEDLWKRAKSFAEEAAKKSQTLTSTSTLTELVSETAKKSKELAAEASKTADLIKTAAIKQ 60
           MEDLWKRAKSFAEEAAKKSQTLTSTSTLTELVSETAKKSKELAAEASKTADLIKTAAIKQ
Sbjct: 1   MEDLWKRAKSFAEEAAKKSQTLTSTSTLTELVSETAKKSKELAAEASKTADLIKTAAIKQ 60

Query: 61  ADHLKSLNVSDIIPPQLPSISIPNFSAPSPHSQSELEKFGLNDDLREFVRGFTSTTFKNF 120
           ADHLKSLNVSDIIPPQLPSISIPNFSAPSPHSQSELEKFGLNDDLREFVRGFTSTTFKNF
Sbjct: 61  ADHLKSLNVSDIIPPQLPSISIPNFSAPSPHSQSELEKFGLNDDLREFVRGFTSTTFKNF 120

Query: 121 PIQDEPEASDVAVTASNVRKDLTEWQEQHATLVLTNVKEISRLRYELCPRIMKERIFWRI 180
           PIQDEPEASDVAVTASNVRKDLTEWQEQHATLVLTNVKEISRLRYELCPRIMKERIFWRI
Sbjct: 121 PIQDEPEASDVAVTASNVRKDLTEWQEQHATLVLTNVKEISRLRYELCPRIMKERIFWRI 180

Query: 181 YFTLVSSHVVPYEKKYMEEIKLKSEEQRTADETKQTPLVGSSEKVEVAQKNLKGKTSPSL 240
           YFTLVSSHV PYEKKYMEEIKLKSEEQRTADETKQTPLVGSSEKVEVA+KNLKGKTSP+L
Sbjct: 181 YFTLVSSHVAPYEKKYMEEIKLKSEEQRTADETKQTPLVGSSEKVEVAEKNLKGKTSPTL 240

Query: 241 STDQDLDTFLLGDLEDSDGGGAGKSSPRF 270
           STDQDLDTFLLGDLEDSDGGGA +    F
Sbjct: 241 STDQDLDTFLLGDLEDSDGGGADEGDESF 269

[Close]

BLAST of Carg17324 vs. ExPASy TrEMBL
Match: A0A6J1HY52 (uncharacterized protein LOC111467710 OS=Cucurbita maxima OX=3661 GN=LOC111467710 PE=4 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.4e-132
Identity = 257/269 (95.54%), Postives = 259/269 (96.28%), Query Frame = 0


Query: 1   MEDLWKRAKSFAEEAAKKSQTLTSTSTLTELVSETAKKSKELAAEASKTADLIKTAAIKQ 60
           MEDLWKRAKSFAEEAAKKSQTLTS STLTELVSETAKKSKELAAEASKTADLIK AAIKQ
Sbjct: 1   MEDLWKRAKSFAEEAAKKSQTLTSASTLTELVSETAKKSKELAAEASKTADLIKIAAIKQ 60

Query: 61  ADHLKSLNVSDIIPPQLPSISIPNFSAPSPHSQSELEKFGLNDDLREFVRGFTSTTFKNF 120
           ADHLKSLNVSDIIPPQLPSISIPNFSAPSPHSQSELEKFGLNDDLREFVRGFTSTTFKNF
Sbjct: 61  ADHLKSLNVSDIIPPQLPSISIPNFSAPSPHSQSELEKFGLNDDLREFVRGFTSTTFKNF 120

Query: 121 PIQDEPEASDVAVTASNVRKDLTEWQEQHATLVLTNVKEISRLRYELCPRIMKERIFWRI 180
           PIQD PEASDVAVTASNVRKDLTEWQEQHATLVLTNVKEISRLRYELCPRIMKERIFWRI
Sbjct: 121 PIQDGPEASDVAVTASNVRKDLTEWQEQHATLVLTNVKEISRLRYELCPRIMKERIFWRI 180

Query: 181 YFTLVSSHVVPYEKKYMEEIKLKSEEQRTADETKQTPLVGSSEKVEVAQKNLKGKTSPSL 240
           YFTLVSSHV PYEKKYMEEIKLKSEEQRTADETKQTPLVGSSEKVEVA+KNLKGKTSPSL
Sbjct: 181 YFTLVSSHVAPYEKKYMEEIKLKSEEQRTADETKQTPLVGSSEKVEVAEKNLKGKTSPSL 240

Query: 241 STDQDLDTFLLGDLEDSDGGGAGKSSPRF 270
           S DQDLDTFLLGDLEDSDGGGA +    F
Sbjct: 241 SNDQDLDTFLLGDLEDSDGGGADEGDECF 269

[Close]

BLAST of Carg17324 vs. ExPASy TrEMBL
Match: A0A6J1H1M5 (uncharacterized protein LOC111458760 OS=Cucurbita moschata OX=3662 GN=LOC111458760 PE=4 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 1.4e-121
Identity = 241/270 (89.26%), Postives = 247/270 (91.48%), Query Frame = 0


Query: 1   MEDLWKRAKSFAEEAAKKSQTLTSTSTLTELVSETAKKSKELAAEASKTADLIKTAAIKQ 60
           MEDLWKRAKSFAEEAAKKSQTLTSTSTL+ELVSETAKKSKELAAEASKTADLIKTAAIKQ
Sbjct: 1   MEDLWKRAKSFAEEAAKKSQTLTSTSTLSELVSETAKKSKELAAEASKTADLIKTAAIKQ 60

Query: 61  ADHLKSLNVSDIIPPQLPSISIPNFSAPSPHSQSELEKFGLNDDLREFVRGFTSTTFKNF 120
           ADHLKSLNV+DIIPPQL SISIPN SAPSPHSQSELEKFGLNDDLREFV GFT TTF+NF
Sbjct: 61  ADHLKSLNVADIIPPQLSSISIPNLSAPSPHSQSELEKFGLNDDLREFVSGFTPTTFQNF 120

Query: 121 PIQDEPEASDVAVTASNVRKDLTEWQEQHATLVLTNVKEISRLRYELCPRIMKERIFWRI 180
           PIQDEPEASDVAVTASNVRKDLTEWQEQHATLVLTNVKEISRLRYELCPRIMKERIFWRI
Sbjct: 121 PIQDEPEASDVAVTASNVRKDLTEWQEQHATLVLTNVKEISRLRYELCPRIMKERIFWRI 180

Query: 181 YFTLVSSHVVPYEKKYMEEIKLKSEEQRTA-DETKQTPLVGSSEKVEVAQKNLKGKTSPS 240
           YFTLVSSHV PYEKKYMEEIKLKSEEQR A DE KQTP VG+SEKVE A++NLKG  S  
Sbjct: 181 YFTLVSSHVAPYEKKYMEEIKLKSEEQRKADDEAKQTPSVGASEKVEEAERNLKGTASKP 240

Query: 241 LSTDQDLDTFLLGDLEDSDGGGAGKSSPRF 270
            S DQDLDTFLLGDLEDSD GGA      F
Sbjct: 241 SSADQDLDTFLLGDLEDSDAGGADDGDESF 270

[Close]

BLAST of Carg17324 vs. ExPASy TrEMBL
Match: A0A6J1D4M8 (uncharacterized protein LOC111017557 OS=Momordica charantia OX=3673 GN=LOC111017557 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 4.1e-121
Identity = 237/269 (88.10%), Postives = 246/269 (91.45%), Query Frame = 0


Query: 1   MEDLWKRAKSFAEEAAKKSQTLTSTSTLTELVSETAKKSKELAAEASKTADLIKTAAIKQ 60
           MEDLWKRAKSFAEEAAKKSQTLTSTSTL+ELVSETAKKSKELAAEASKTADLIKTAAI  
Sbjct: 1   MEDLWKRAKSFAEEAAKKSQTLTSTSTLSELVSETAKKSKELAAEASKTADLIKTAAIHH 60

Query: 61  ADHLKSLNVSDIIPPQLPSISIPNFSAPSPHSQSELEKFGLNDDLREFVRGFTSTTFKNF 120
           ADHLKSLNVSDIIPPQL SISIPNFSAPSPHS S+L KFGL+DDLR+FVRGFTSTTF+NF
Sbjct: 61  ADHLKSLNVSDIIPPQLSSISIPNFSAPSPHSHSDLHKFGLDDDLRDFVRGFTSTTFQNF 120

Query: 121 PIQDEPEASDVAVTASNVRKDLTEWQEQHATLVLTNVKEISRLRYELCPRIMKERIFWRI 180
           PIQD PE SDV+VTASNVRKDLTEWQE HATLVLTNVKEISRLRYELCPRIMKERIFWRI
Sbjct: 121 PIQDAPEVSDVSVTASNVRKDLTEWQEHHATLVLTNVKEISRLRYELCPRIMKERIFWRI 180

Query: 181 YFTLVSSHVVPYEKKYMEEIKLKSEEQRTADETKQTPLVGSSEKVEVAQKNLKGKTSPSL 240
           YFTLV+SHV PYEKKYMEEIKLKSEEQR ADE KQTPLVG+SEKVE  +KNLKGKTS   
Sbjct: 181 YFTLVNSHVAPYEKKYMEEIKLKSEEQRKADEGKQTPLVGASEKVEGTEKNLKGKTSNLS 240

Query: 241 STDQDLDTFLLGDLEDSDGGGAGKSSPRF 270
           S DQDLDTFLLGDLEDSDGGGA      F
Sbjct: 241 SADQDLDTFLLGDLEDSDGGGADDGDESF 269

[Close]

BLAST of Carg17324 vs. ExPASy TrEMBL
Match: A0A6J1IPK1 (uncharacterized protein LOC111477659 OS=Cucurbita maxima OX=3661 GN=LOC111477659 PE=4 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 6.5e-119
Identity = 238/270 (88.15%), Postives = 244/270 (90.37%), Query Frame = 0


Query: 1   MEDLWKRAKSFAEEAAKKSQTLTSTSTLTELVSETAKKSKELAAEASKTADLIKTAAIKQ 60
           MEDLWKRAKSFAEEAAKKSQTLTSTSTL+ELVSETAKKSKELAAEASKTADLIKTAAIKQ
Sbjct: 1   MEDLWKRAKSFAEEAAKKSQTLTSTSTLSELVSETAKKSKELAAEASKTADLIKTAAIKQ 60

Query: 61  ADHLKSLNVSDIIPPQLPSISIPNFSAPSPHSQSELEKFGLNDDLREFVRGFTSTTFKNF 120
           ADHLKSLNV+DIIPPQL SISI N SAPSPHSQS LEKFGLNDDLREFV GFT TTF+NF
Sbjct: 61  ADHLKSLNVADIIPPQLSSISISNLSAPSPHSQSVLEKFGLNDDLREFVSGFTPTTFQNF 120

Query: 121 PIQDEPEASDVAVTASNVRKDLTEWQEQHATLVLTNVKEISRLRYELCPRIMKERIFWRI 180
           PIQD PEASDVAVTASNVRKDLTEWQEQHATLVLTNVKEISRLRYELCPRIMKERIFWRI
Sbjct: 121 PIQDGPEASDVAVTASNVRKDLTEWQEQHATLVLTNVKEISRLRYELCPRIMKERIFWRI 180

Query: 181 YFTLVSSHVVPYEKKYMEEIKLKSEEQRTA-DETKQTPLVGSSEKVEVAQKNLKGKTSPS 240
           YFTLVSSHV PYEKKY+EEIKLKSEEQR A DE KQTP VG+SEKVE A+KNLKG  S  
Sbjct: 181 YFTLVSSHVAPYEKKYVEEIKLKSEEQRKADDEAKQTPSVGASEKVEEAEKNLKGTASKR 240

Query: 241 LSTDQDLDTFLLGDLEDSDGGGAGKSSPRF 270
            S DQDLDTFLLGDLEDSD GGA      F
Sbjct: 241 SSADQDLDTFLLGDLEDSDAGGADDGDESF 270

[Close]

BLAST of Carg17324 vs. TAIR 10
Match: AT1G26300.1 (BSD domain-containing protein )

HSP 1 Score: 258.5 bits (659), Expect = 6.1e-69
Identity = 158/289 (54.67%), Postives = 195/289 (67.47%), Query Frame = 0


Query: 1   MEDLWKRAKSFAEEAAKKSQTLTSTSTLT-----------------------------EL 60
           MEDLWKRAKSFAEEA KKSQT+T +S+ T                             + 
Sbjct: 1   MEDLWKRAKSFAEEAGKKSQTITQSSSATFVNLVTETAKKSKELALEASKKADQFNAADF 60

Query: 61  VSETAKKSKELAAEASKTADLIKTAAIKQADHLKSL-NVSDIIPPQLPSISIPNFSAPSP 120
           V+ETAKKSKE AAEASK AD  K AA+KQAD ++++ +++DII     S S         
Sbjct: 61  VAETAKKSKEFAAEASKKADQFKVAALKQADQIQNIKSIADIIGTGTGSGS--------- 120

Query: 121 HSQSELEKFGLNDDLREFVRGFTSTTFKNFPIQDE-PEASDVAVTASNVRKDLTEWQEQH 180
            S++EL +FG+ DDLREF  G TS TF+ FP QD+  E SDV   ASNVRKDL++WQE+H
Sbjct: 121 GSEAELLEFGVTDDLREFAEGLTSATFQAFPDQDQGDEVSDVITNASNVRKDLSDWQERH 180

Query: 181 ATLVLTNVKEISRLRYELCPRIMKERIFWRIYFTLVSSHVVPYEKKYMEEIKLKSEEQRT 240
           ATLVLT+VK+IS+LRYELCPR MKER FWRIYFTLVS+HV PYE+KYMEE+K K E    
Sbjct: 181 ATLVLTSVKQISKLRYELCPRFMKERRFWRIYFTLVSTHVSPYERKYMEELKTKGEHGN- 240

Query: 241 ADETKQTPLVGSSEKVEVAQKNLKGKTSPSLSTDQDLDTFLLGDLEDSD 259
            +E K+ P  G +E VE   KN+  + + + S++QDLDTFLLGDLEDSD
Sbjct: 241 -EEAKKAPATGETETVE---KNVAIRRTSTASSEQDLDTFLLGDLEDSD 275

[Close]

BLAST of Carg17324 vs. TAIR 10
Match: AT1G69030.1 (BSD domain-containing protein )

HSP 1 Score: 255.8 bits (652), Expect = 4.0e-68
Identity = 160/290 (55.17%), Postives = 200/290 (68.97%), Query Frame = 0


Query: 1   MEDLWKRAKSFAEEAAKKSQTLT---STSTLTELVSETAKKSKELAAEASKTADLI---- 60
           MEDLWKRAKSFAEEAAKKSQT+T   S++T   LV+ETAKKSKE A EASK AD I    
Sbjct: 1   MEDLWKRAKSFAEEAAKKSQTITLQSSSTTFVNLVTETAKKSKEFALEASKKADSINVSE 60

Query: 61  -----------------------KTAAIKQADHLKSL-NVSDIIPPQLPSISIPNFSAPS 120
                                  K  A+KQAD ++++ +++DIIP  L      +    S
Sbjct: 61  FVAETAKKSKEFAAEVSTKADQLKVVALKQADQIQNIKSIADIIPGGLGGSG--SGGGGS 120

Query: 121 PHSQSELEKFGLNDDLREFVRGFTSTTFKNFPIQDE-PEASDVAVTASNVRKDLTEWQEQ 180
             S+SEL  FG+ DDLREFV+G TS TF+ FP QDE  E SD+  +ASNVRKDL+EWQE+
Sbjct: 121 EISESELVSFGITDDLREFVKGLTSATFQAFPEQDESSEVSDLETSASNVRKDLSEWQER 180

Query: 181 HATLVLTNVKEISRLRYELCPRIMKERIFWRIYFTLVSSHVVPYEKKYMEEIKLKSEEQR 240
           HATLVL +VK+IS+LRYELCPR+MKER FWRIYFTLVS+HV PYE+KYMEE++ K+E + 
Sbjct: 181 HATLVLGSVKQISKLRYELCPRVMKERRFWRIYFTLVSTHVAPYERKYMEELRNKAESK- 240

Query: 241 TADETKQTPLVGSSEKVEVAQKNLKGKTSPSLSTDQDLDTFLLGDLEDSD 259
             +E K++P +G +E  E      K + S + S++QDLDTFLLGDLEDSD
Sbjct: 241 -DEEAKKSPGLGRTESAE------KNRIS-TASSEQDLDTFLLGDLEDSD 279

[Close]

BLAST of Carg17324 vs. TAIR 10
Match: AT1G26300.2 (BSD domain-containing protein )

HSP 1 Score: 203.8 bits (517), Expect = 1.8e-52
Identity = 123/222 (55.41%), Postives = 149/222 (67.12%), Query Frame = 0


Query: 1   MEDLWKRAKSFAEEAAKKSQTLTSTSTLT-----------------------------EL 60
           MEDLWKRAKSFAEEA KKSQT+T +S+ T                             + 
Sbjct: 1   MEDLWKRAKSFAEEAGKKSQTITQSSSATFVNLVTETAKKSKELALEASKKADQFNAADF 60

Query: 61  VSETAKKSKELAAEASKTADLIKTAAIKQADHLKSL-NVSDIIPPQLPSISIPNFSAPSP 120
           V+ETAKKSKE AAEASK AD  K AA+KQAD ++++ +++DII     S S         
Sbjct: 61  VAETAKKSKEFAAEASKKADQFKVAALKQADQIQNIKSIADIIGTGTGSGS--------- 120

Query: 121 HSQSELEKFGLNDDLREFVRGFTSTTFKNFPIQDE-PEASDVAVTASNVRKDLTEWQEQH 180
            S++EL +FG+ DDLREF  G TS TF+ FP QD+  E SDV   ASNVRKDL++WQE+H
Sbjct: 121 GSEAELLEFGVTDDLREFAEGLTSATFQAFPDQDQGDEVSDVITNASNVRKDLSDWQERH 180

Query: 181 ATLVLTNVKEISRLRYELCPRIMKERIFWRIYFTLVSSHVVP 192
           ATLVLT+VK+IS+LRYELCPR MKER FWRIYFTLVS+HV P
Sbjct: 181 ATLVLTSVKQISKLRYELCPRFMKERRFWRIYFTLVSTHVSP 213

[Close]

BLAST of Carg17324 vs. TAIR 10
Match: AT3G24820.1 (BSD domain-containing protein )

HSP 1 Score: 105.5 bits (262), Expect = 6.6e-23
Identity = 63/168 (37.50%), Postives = 99/168 (58.93%), Query Frame = 0


Query: 81  SIPNFSAPSPHSQSELEKFGLNDDLREFVRGFTSTTFKNFPIQDEPEASDV--------- 140
           S+ N S+     + E+   G+ D+L + VR FT  TFKNF ++DE E   V         
Sbjct: 23  SLKNGSSVKEEGKDEI--LGVTDELIDHVRSFTIDTFKNFSLEDEEEEVSVNPLGDEDNG 82

Query: 141 AVTASNVRKDLTEWQEQHATLVLTNVKEISRLRYELCPRIMKERIFWRIYFTLVSSHVVP 200
             +++NV+KDL++WQE+HA LVL+  KE+S+LR++LCPR++KE  FWRIYF LV   V  
Sbjct: 83  MSSSANVKKDLSDWQEKHAVLVLSKSKELSQLRFKLCPRVLKEHQFWRIYFQLVRKIVAK 142

Query: 201 YEKKYMEEIKLKSEEQRTADETKQTPLVGSSEKVEVAQKNLKGKTSPS 240
           YE   +++ +++    R A E  +T       +VE+++   +  T P+
Sbjct: 143 YEVLAIQQAQIR----RMAMEDSKTSESKGVYEVEMSETKQRLSTGPA 184

[Close]

BLAST of Carg17324 vs. TAIR 10
Match: AT5G65910.1 (BSD domain-containing protein )

HSP 1 Score: 50.1 bits (118), Expect = 3.3e-06
Identity = 30/93 (32.26%), Postives = 47/93 (50.54%), Query Frame = 0


Query: 95  ELEKFGLNDDLREFVRGFT--STTFKNFPIQDEPEASDVAVTASNVRKDLTEWQEQHATL 154
           + +  G+ ++L  FV+       T+ +FP+ D+ ++ D          +L + Q +HA  
Sbjct: 139 DYDVIGVTEELVAFVKDLAMHPETWLDFPLPDDDDSFD--------DFELADAQYEHALA 198

Query: 155 VLTNVKEISRLRYELCPRIMKERIFWRIYFTLV 186
           V      ++ LR ELCP  M E  FWRIYF LV
Sbjct: 199 VERLAPSLASLRIELCPEYMTENCFWRIYFVLV 223

The following BLAST results are available for this feature:

BLAST of Carg17324 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7013088.1	8.1e-140	100.00	hypothetical protein SDJN02_25844 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6574029.1	5.5e-136	97.77	DNA-directed RNA polymerase 2, chloroplastic/mitochondrial, partial [Cucurbita a...	[more]
XP_022944919.1	7.9e-135	96.65	uncharacterized protein LOC111449307 [Cucurbita moschata]	[more]
XP_023542843.1	2.3e-134	96.65	uncharacterized protein LOC111802641 [Cucurbita pepo subsp. pepo]	[more]
XP_022968483.1	2.8e-132	95.54	uncharacterized protein LOC111467710 [Cucurbita maxima]	[more]

BLAST of Carg17324 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg17324 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FZH6	3.8e-135	96.65	uncharacterized protein LOC111449307 OS=Cucurbita moschata OX=3662 GN=LOC1114493...	[more]
A0A6J1HY52	1.4e-132	95.54	uncharacterized protein LOC111467710 OS=Cucurbita maxima OX=3661 GN=LOC111467710...	[more]
A0A6J1H1M5	1.4e-121	89.26	uncharacterized protein LOC111458760 OS=Cucurbita moschata OX=3662 GN=LOC1114587...	[more]
A0A6J1D4M8	4.1e-121	88.10	uncharacterized protein LOC111017557 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1IPK1	6.5e-119	88.15	uncharacterized protein LOC111477659 OS=Cucurbita maxima OX=3661 GN=LOC111477659...	[more]

BLAST of Carg17324 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26300.1	6.1e-69	54.67	BSD domain-containing protein	[more]
AT1G69030.1	4.0e-68	55.17	BSD domain-containing protein	[more]
AT1G26300.2	1.8e-52	55.41	BSD domain-containing protein	[more]
AT3G24820.1	6.6e-23	37.50	BSD domain-containing protein	[more]
AT5G65910.1	3.3e-06	32.26	BSD domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005607	BSD domain	SMART	SM00751	wurzfinal6	coord: 137..189 e-value: 5.7E-12 score: 55.8
IPR005607	BSD domain	PFAM	PF03909	BSD	coord: 143..188 e-value: 2.4E-10 score: 40.2
IPR005607	BSD domain	PROSITE	PS50858	BSD	coord: 137..189 score: 10.957644
IPR035925	BSD domain superfamily	GENE3D	1.10.3970.10	BSD domain	coord: 101..215 e-value: 1.2E-9 score: 40.1
IPR035925	BSD domain superfamily	SUPERFAMILY	140383	BSD domain-like	coord: 102..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..244
None	No IPR available	PANTHER	PTHR31923:SF31	BSD DOMAIN PROTEIN	coord: 3..261
None	No IPR available	PANTHER	PTHR31923	BSD DOMAIN-CONTAINING PROTEIN	coord: 3..261

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17324-RA	Carg17324-RA	mRNA