Carg17299 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg17299
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionremorin 4.1-like isoform X2
LocationCarg_Chr18: 10653187 .. 10657731 (+)
RNA-Seq ExpressionCarg17299
SyntenyCarg17299
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTTTTCTTTTCTTTTTATAAATAGAATAATAGTGTAATGTTTCTTCAAATAAATCCCTATCCCACCCCCCTCCTCTACGCCATCATCACTGTGAGCTTTTAATATCCCCGCTGAGAAGAAATCTCATTACAGAGCTTTCTTTTCCAACCCCTATGGATCAGTGGGTGACAACAGATGAGGTATTTAATGCTTTTATAGTTCTAACAAATTTATTTTATGGAACATATAACATACAAATCTTCTGCACCTCCACAGGACATCGATAGACAACAACGAGGCAGTAGAACACAAACATACTTGTTTCCCCTGAAATCCCAATCTTCCAGAGGTAAACCGACAGACTTTATCATCCTTCTATTTTAGTTTTATACTTTCAGATGTTCGTTTAAATTTCGAAGGTTGCAAGCTCGTTTCGTTCTTGTTTTGTACTTTCGTACGTTAGCATTTAAGGTTTGAGGGTTACAATCTCGTTCCATTCTTGTTCGGGGTTACAATCTTGTTTCATTCTTGTGAGATCTCATATCGATTGGAGAGGGAAACAAAAGATTTTGTGTGAAAACCTCTTCCTATTAGACCGTTTTGAAGTGTTTGGGAGACGCCCATAAGGTGGGTTTGGGCTGTTACAAATGGTGTCGAGGATGATGGTCTGAGATCTCACATCGGTTGGAGAGGGGAACGAAAGATTTTGAGTGAAAACCTCTTCCTATTACACCGTTTTGAAGTGTTTGGGAGACGCCCATAAGGTGGGTTTGGGCTGTTACAAATGGTGTCGAGGATGATGGTCCGAGATCTCACATCGGTTGGAGAGGGAAAAGAAAGATTTTGAGTGAAAACCTCTTCCTATTAGACCGTTTTGAAGTGTTTGGGAGACGCCCATAAGGTGGGTTTGGGCTGTTACAAATGGTGTCGAGGATGATGGTCCGAGATCTCACATCGGTTGGAGAGGGAAACGAAAGATTTTGAGTGAAAACCTCTTCCTATTACACCGTTTTGAAGTGTTTGGGAGACGCCCATAAGGTAGGTTTGGGCTGTTACAAATGGTGTCGAGGATGATGGTTTGAGATCTCACATCGGTTGAAGAGAGAAACGAAAGATTTTGAGTGAAAACCTCTTCCTATTAGACCGTTTTGAAGTGTTTGGGAAACACCCATAAAGTGGGTTTGGACTGTTACAAATGGTGTCAGGGACGATAGTCTGAGATCTCACATCGATTAGATAGAAAAACGAAACATTTCTGATAAGGATATATAGCTAGAAAGAAAATGAAACATTTCTTAAATAAGGATATAAAGTGAGAGAAGGAAACAAATGTAAAGGTAACACAAATGCAGCGTTCATGTGATTAATAATAAAGTTATAATCTCAGAAAATTTTAGCGTGTTAAAAGTTTAAATCCAAAAATGTTGAAAAATAGAACACAGAAGCGACGTCGTTTTCAAGAAATGTTTGTTGTTTATTTTATGCAGAGAAAACAACGGCGGGCTGGTTGGGAAGGCAATTTTTGCAGCAAATGAGTCGAGGGAATGAATTTTCCGACGACGAAATAGAGCGTGTAACCGCCGTAGCCGCCGCCGCCTACGCAATTCATTCCATTCAGAATTCAGAAATCGCGAGACGCAGAAAGAATGCCGATTATCCTGAAACGTCGTCGTTCCCAAAGTTTACACACCTCAAGGAAGACAATCGCCCCCCCACTCCTCGTCCGGCGCCGGAATCTGCTAAGCTTTCCCGGCGGTTAATAGGTAACAAATTTTTTTACCTGCAGATGTTGATAGGTTTCTTTTTCTTTACATTTCTCCAGATAATTCACCCGCCGAAGATAAGTTAATTATTTCCTAACTATAATTAACATTGAAACTTATTTTGAAACCAATTTTAAATTTATGAAAAAACATGATAATATAATTGAAAAATATTAAAAAATAAAAAATTAGGAAGGTTAAAAAAAATTACAGAAAAACCCAACTCAATAATTTTAAAATTTCTAGATTATATTAAATTGTTAATTTAAAAAAAATATATTTATATATTTTTTTTATTAAGTTTAATTTTTTATTATTTATTCTTTAATAATTATTTATATCTTAAGATAATTTTTAAAATATATATTAAAAATTTGAAATTAGGTTGTAAATCTTAATTAAAAATTTAAAAATAAATAAAATCGTGTTTTATTTTTATTCAAATATGAAAAAATTAATAAACAATTGAACCAAAATAATTGTGGTTGGATTCATTATTAAATAAAAATGATTATTTTTTATGAAAATCGTATGCTCTGATTTTAAAGCCAAATTTGGATTTGAATGGTTTGTGTTAGATAAAGATCATCTGCAAGATCCTGAACAAAGCCAACGAAGGAATGTGTCAGTGACCCACGAACAACCAAAACGGAAACCAACGGAAAACACAACCGATCCCGGTAGCCGTCCATACTTCAAAGAGACAGCTTTTTCCGGCAACAAACCAGACACCTCCGGCAGCCGAAGAACAGACCCAGAGAAACCATCAAACATCTCCGGCAGCCGAAGAATAGAAACAGAGAAACCAGCAGGCATCTCCGGCAGCCGAAGAACAGAACCAGAGAAACCATCAAACATCTCCGGCAGCCGAAGAACAGAAGCAGAGAAACCAGCGGTAGTCCCAAGACCTCCAACTCCATTTAATCGGCCGACCGACCCACAAAAGCCACTCCCAACCCAAACCAGACCTTATGATTCAAGAGAAACAAAAGCAGATCAGTGGGAAAAGGCTGAGATGGCTAAAATCAACGAGAGGTAAACTCGAAACTTTTGGATTAATGAAATAAACTTACTGTTTTTTAAACATTTGGAGGAAACGTTTCAGATTCCATAAAGTGATCGAGACAGTATCTTACTGGGAAAGAAAGAAGAGGGACAAAGCCAGGAGGAAATACGATGAATCACAGGTTCATAATCAGTTCATCTCTGTGTTTAAAGTGCGTTTCATTTACAGAGTAACTAATTGTTTAATAATGTTCAAACGTTGAAGGCTGCGGGCGTGAAGAGGTCGAAGAGGGAAAAGGGAATAAAGAAATTCGAGGAAGACATGGATTTTATAAAGCAAATTGCAGAAGAAGCAAGAGCCAAAGCCGATCAAAAGCGAAGAAATGATATTCTTAAAGCTAATCAAAAAGCAGATATTATCAGACAAACAGGGGACCTCCCTGTTTCTTGTTCCTGCTGCTGAACACTAACGAATTACATTATCAAACTTCGTAATCACTTTGTTGACCATCAAACTGTAATGATTTGACTTCTTTTTTTCTTCTTTTTGTGTGCACATTACTGAATGATTGCTCTGTGAACAAAAATAACCAGTAATTCGTGTTGCTTTCAAATGGGTTCTCTGTTTTACTCTGTTTTCATCGTTTAATTTGTTGGTTCTCTGTATTACTCTGTTCATAGTGATGAAATTCCTCTGTTTTTAGCTTCACAAGCTATTTGAATTTCCTAAAAACTCTAAAATCCAATGATTTGCGTAAAAGAAAAGAGGGATAGAGACTAAGAAACCCGATCTGTTGCTAAAGACGAGCAAGAGCCAGAGACACACTCGACAAGTAGACAAGAGAGTAGTGATAGTGACGGCCTGTGAAATAAAGTCTACTAAGGACTCTATGACCATCTCCAACCTTCCGAAATTAAAGGGTATGTTTTGTTTCTTAACACTCTTTCATTGTTATGCCAACCGAGAGGGATACCGAGTATCACGGTCCTACTTTTTTAATCGTTCAACGTTGTGATCTTTCTTGGTCGCATCATGGTACTCGTTTAGCTCCTCGTGTGGTCGGATGGGTGCCACGTGAGGGTCGCAGTTCTATTGTCGCAACGCGAGGGTCCCAACCTACTCACTACTCTCGAAAGAATAGCTCAATTTCGATTTTGTTGAGAACAAGATAAGAACCACAAATCTAACATATAAATTGTGGGTTAAACACAGAACATAACTGGTAGCCTACAGAGCACACATTTATGATAGGTTTTAGCAGTAAATGCAAACCCTTATTTACAGAATTACACAAAAACAGAGCAACAAGAACAACCACATAAAAGGAGAAGGACCCAATTGCAAAAGAGGGTCATTTCTTCAAGAAACCTTCAGCCACCTTCATGTAATCCCCAAACCCAGATCCTCCGCCGTCCTTCTCGCCGGACTCCTCCTTCTTCGGCGGCTCAGCCGGTTTTGGCTCGGCAGCGGGAACAGGAGTGGCAGAATGAGACTTCTCATACTTATTGAGATACTCCTCAGCCTGGTTAACATACTTACCAACTCCCTTGGTTTCATCCAATTTGCCGTAATCCGAAGCCGCTCCAAGCAGGTCAGCGCCTGCTCCGGCAGCTTTGCCCTTGTCCACCTCGCCGCCGCCGCCGAAAGAGGACTTGGCAGCGTCGGCGACCAACCTGGCGCTGGACAAGAGCTCGGAAGCTGATGGCTTGTGGTTGTCTGGATTTTGGTCGTGTGGCTTGTCGGCAGAGCCGCTGAGTTTAGACAAGAAATCCATGATTGTTAAAATAGACACGAAA

mRNA sequence

TCTTTTCTTTTCTTTTTATAAATAGAATAATAGTGTAATGTTTCTTCAAATAAATCCCTATCCCACCCCCCTCCTCTACGCCATCATCACTGTGAGCTTTTAATATCCCCGCTGAGAAGAAATCTCATTACAGAGCTTTCTTTTCCAACCCCTATGGATCAGTGGGTGACAACAGATGAGGACATCGATAGACAACAACGAGGCAGTAGAACACAAACATACTTGTTTCCCCTGAAATCCCAATCTTCCAGAGAGAAAACAACGGCGGGCTGGTTGGGAAGGCAATTTTTGCAGCAAATGAGTCGAGGGAATGAATTTTCCGACGACGAAATAGAGCGTGTAACCGCCGTAGCCGCCGCCGCCTACGCAATTCATTCCATTCAGAATTCAGAAATCGCGAGACGCAGAAAGAATGCCGATTATCCTGAAACGTCGTCGTTCCCAAAGTTTACACACCTCAAGGAAGACAATCGCCCCCCCACTCCTCGTCCGGCGCCGGAATCTGCTAAGCTTTCCCGGCGGTTAATAGATAAAGATCATCTGCAAGATCCTGAACAAAGCCAACGAAGGAATGTGTCAGTGACCCACGAACAACCAAAACGGAAACCAACGGAAAACACAACCGATCCCGGTAGCCGTCCATACTTCAAAGAGACAGCTTTTTCCGGCAACAAACCAGACACCTCCGGCAGCCGAAGAACAGACCCAGAGAAACCATCAAACATCTCCGGCAGCCGAAGAATAGAAACAGAGAAACCAGCAGGCATCTCCGGCAGCCGAAGAACAGAACCAGAGAAACCATCAAACATCTCCGGCAGCCGAAGAACAGAAGCAGAGAAACCAGCGGTAGTCCCAAGACCTCCAACTCCATTTAATCGGCCGACCGACCCACAAAAGCCACTCCCAACCCAAACCAGACCTTATGATTCAAGAGAAACAAAAGCAGATCAGTGGGAAAAGGCTGAGATGGCTAAAATCAACGAGAGATTCCATAAAGTGATCGAGACAGTATCTTACTGGGAAAGAAAGAAGAGGGACAAAGCCAGGAGGAAATACGATGAATCACAGGCTGCGGGCGTGAAGAGGTCGAAGAGGGAAAAGGGAATAAAGAAATTCGAGGAAGACATGGATTTTATAAAGCAAATTGCAGAAGAAGCAAGAGCCAAAGCCGATCAAAAGCGAAGAAATGATATTCTTAAAGCTAATCAAAAAGCAGATATTATCAGACAAACAGGGGACCTCCCTGTTTCTTGTTCCTGCTGCTGAACACTAACGAATTACATTATCAAACTTCGTAATCACTTTGTTGACCATCAAACTGTAATGATTTGACTTCTTTTTTTCTTCTTTTTGTGTGCACATTACTGAATGATTGCTCTGTGAACAAAAATAACCAGTAATTCGTGTTGCTTTCAAATGGGTTCTCTGTTTTACTCTGTTTTCATCGTTTAATTTGTTGGTTCTCTGTATTACTCTGTTCATAGTGATGAAATTCCTCTGTTTTTAGCTTCACAAGCTATTTGAATTTCCTAAAAACTCTAAAATCCAATGATTTGCGTAAAAGAAAAGAGGGATAGAGACTAAGAAACCCGATCTGTTGCTAAAGACGAGCAAGAGCCAGAGACACACTCGACAAGTAGACAAGAGAGTAGTGATAGTGACGGCCTGTGAAATAAAGTCTACTAAGGACTCTATGACCATCTCCAACCTTCCGAAATTAAAGGGTATGTTTTGTTTCTTAACACTCTTTCATTGTTATGCCAACCGAGAGGGATACCGAGTATCACGGTCCTACTTTTTTAATCGTTCAACGTTGTGATCTTTCTTGGTCGCATCATGGTACTCGTTTAGCTCCTCGTGTGGTCGGATGGGTGCCACGTGAGGGTCGCAGTTCTATTGTCGCAACGCGAGGGTCCCAACCTACTCACTACTCTCGAAAGAATAGCTCAATTTCGATTTTGTTGAGAACAAGATAAGAACCACAAATCTAACATATAAATTGTGGGTTAAACACAGAACATAACTGGTAGCCTACAGAGCACACATTTATGATAGGTTTTAGCAGTAAATGCAAACCCTTATTTACAGAATTACACAAAAACAGAGCAACAAGAACAACCACATAAAAGGAGAAGGACCCAATTGCAAAAGAGGGTCATTTCTTCAAGAAACCTTCAGCCACCTTCATGTAATCCCCAAACCCAGATCCTCCGCCGTCCTTCTCGCCGGACTCCTCCTTCTTCGGCGGCTCAGCCGGTTTTGGCTCGGCAGCGGGAACAGGAGTGGCAGAATGAGACTTCTCATACTTATTGAGATACTCCTCAGCCTGGTTAACATACTTACCAACTCCCTTGGTTTCATCCAATTTGCCGTAATCCGAAGCCGCTCCAAGCAGGTCAGCGCCTGCTCCGGCAGCTTTGCCCTTGTCCACCTCGCCGCCGCCGCCGAAAGAGGACTTGGCAGCGTCGGCGACCAACCTGGCGCTGGACAAGAGCTCGGAAGCTGATGGCTTGTGGTTGTCTGGATTTTGGTCGTGTGGCTTGTCGGCAGAGCCGCTGAGTTTAGACAAGAAATCCATGATTGTTAAAATAGACACGAAA

Coding sequence (CDS)

ATGGATCAGTGGGTGACAACAGATGAGGACATCGATAGACAACAACGAGGCAGTAGAACACAAACATACTTGTTTCCCCTGAAATCCCAATCTTCCAGAGAGAAAACAACGGCGGGCTGGTTGGGAAGGCAATTTTTGCAGCAAATGAGTCGAGGGAATGAATTTTCCGACGACGAAATAGAGCGTGTAACCGCCGTAGCCGCCGCCGCCTACGCAATTCATTCCATTCAGAATTCAGAAATCGCGAGACGCAGAAAGAATGCCGATTATCCTGAAACGTCGTCGTTCCCAAAGTTTACACACCTCAAGGAAGACAATCGCCCCCCCACTCCTCGTCCGGCGCCGGAATCTGCTAAGCTTTCCCGGCGGTTAATAGATAAAGATCATCTGCAAGATCCTGAACAAAGCCAACGAAGGAATGTGTCAGTGACCCACGAACAACCAAAACGGAAACCAACGGAAAACACAACCGATCCCGGTAGCCGTCCATACTTCAAAGAGACAGCTTTTTCCGGCAACAAACCAGACACCTCCGGCAGCCGAAGAACAGACCCAGAGAAACCATCAAACATCTCCGGCAGCCGAAGAATAGAAACAGAGAAACCAGCAGGCATCTCCGGCAGCCGAAGAACAGAACCAGAGAAACCATCAAACATCTCCGGCAGCCGAAGAACAGAAGCAGAGAAACCAGCGGTAGTCCCAAGACCTCCAACTCCATTTAATCGGCCGACCGACCCACAAAAGCCACTCCCAACCCAAACCAGACCTTATGATTCAAGAGAAACAAAAGCAGATCAGTGGGAAAAGGCTGAGATGGCTAAAATCAACGAGAGATTCCATAAAGTGATCGAGACAGTATCTTACTGGGAAAGAAAGAAGAGGGACAAAGCCAGGAGGAAATACGATGAATCACAGGCTGCGGGCGTGAAGAGGTCGAAGAGGGAAAAGGGAATAAAGAAATTCGAGGAAGACATGGATTTTATAAAGCAAATTGCAGAAGAAGCAAGAGCCAAAGCCGATCAAAAGCGAAGAAATGATATTCTTAAAGCTAATCAAAAAGCAGATATTATCAGACAAACAGGGGACCTCCCTGTTTCTTGTTCCTGCTGCTGA

Protein sequence

MDQWVTTDEDIDRQQRGSRTQTYLFPLKSQSSREKTTAGWLGRQFLQQMSRGNEFSDDEIERVTAVAAAAYAIHSIQNSEIARRRKNADYPETSSFPKFTHLKEDNRPPTPRPAPESAKLSRRLIDKDHLQDPEQSQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETAFSGNKPDTSGSRRTDPEKPSNISGSRRIETEKPAGISGSRRTEPEKPSNISGSRRTEAEKPAVVPRPPTPFNRPTDPQKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRKYDESQAAGVKRSKREKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQTGDLPVSCSCC
Homology
[Close]
BLAST of Carg17299 vs. NCBI nr
Match: KAG7013112.1 (hypothetical protein SDJN02_25868 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 710.3 bits (1832), Expect = 8.7e-201
Identity = 370/370 (100.00%), Postives = 370/370 (100.00%), Query Frame = 0 

Query: 1   MDQWVTTDEDIDRQQRGSRTQTYLFPLKSQSSREKTTAGWLGRQFLQQMSRGNEFSDDEI 60
           MDQWVTTDEDIDRQQRGSRTQTYLFPLKSQSSREKTTAGWLGRQFLQQMSRGNEFSDDEI
Sbjct: 1   MDQWVTTDEDIDRQQRGSRTQTYLFPLKSQSSREKTTAGWLGRQFLQQMSRGNEFSDDEI 60

Query: 61  ERVTAVAAAAYAIHSIQNSEIARRRKNADYPETSSFPKFTHLKEDNRPPTPRPAPESAKL 120
           ERVTAVAAAAYAIHSIQNSEIARRRKNADYPETSSFPKFTHLKEDNRPPTPRPAPESAKL
Sbjct: 61  ERVTAVAAAAYAIHSIQNSEIARRRKNADYPETSSFPKFTHLKEDNRPPTPRPAPESAKL 120

Query: 121 SRRLIDKDHLQDPEQSQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETAFSGNKPDTSGS 180
           SRRLIDKDHLQDPEQSQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETAFSGNKPDTSGS
Sbjct: 121 SRRLIDKDHLQDPEQSQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETAFSGNKPDTSGS 180

Query: 181 RRTDPEKPSNISGSRRIETEKPAGISGSRRTEPEKPSNISGSRRTEAEKPAVVPRPPTPF 240
           RRTDPEKPSNISGSRRIETEKPAGISGSRRTEPEKPSNISGSRRTEAEKPAVVPRPPTPF
Sbjct: 181 RRTDPEKPSNISGSRRIETEKPAGISGSRRTEPEKPSNISGSRRTEAEKPAVVPRPPTPF 240

Query: 241 NRPTDPQKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRK 300
           NRPTDPQKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRK
Sbjct: 241 NRPTDPQKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRK 300

Query: 301 YDESQAAGVKRSKREKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQT 360
           YDESQAAGVKRSKREKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQT
Sbjct: 301 YDESQAAGVKRSKREKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQT 360

Query: 361 GDLPVSCSCC 371
           GDLPVSCSCC
Sbjct: 361 GDLPVSCSCC 370

[Close]
BLAST of Carg17299 vs. NCBI nr
Match: XP_022945433.1 (neurofilament medium polypeptide-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 701.8 bits (1810), Expect = 3.1e-198
Identity = 366/370 (98.92%), Postives = 366/370 (98.92%), Query Frame = 0 

Query: 1   MDQWVTTDEDIDRQQRGSRTQTYLFPLKSQSSREKTTAGWLGRQFLQQMSRGNEFSDDEI 60
           MDQWVTTDEDID QQRGSRTQTYLFPLKSQSSREKTTAGWLGRQFLQQMSRGNEFSDDEI
Sbjct: 1   MDQWVTTDEDIDGQQRGSRTQTYLFPLKSQSSREKTTAGWLGRQFLQQMSRGNEFSDDEI 60

Query: 61  ERVTAVAAAAYAIHSIQNSEIARRRKNADYPETSSFPKFTHLKEDNRPPTPRPAPESAKL 120
           ERVTAVAAAAYAIHSIQNSEIARRRKNADYPETSSFPKFTHLKEDNRPPTPRPAPE AKL
Sbjct: 61  ERVTAVAAAAYAIHSIQNSEIARRRKNADYPETSSFPKFTHLKEDNRPPTPRPAPEPAKL 120

Query: 121 SRRLIDKDHLQDPEQSQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETAFSGNKPDTSGS 180
           SRRLIDKDHLQDPEQSQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETAFSGNKPDTSGS
Sbjct: 121 SRRLIDKDHLQDPEQSQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETAFSGNKPDTSGS 180

Query: 181 RRTDPEKPSNISGSRRIETEKPAGISGSRRTEPEKPSNISGSRRTEAEKPAVVPRPPTPF 240
           RRTDPEKPSNISGSRR ETEKPAGISGSRRTEPEKPSNISGSRRTE EKPAVVPRPPTPF
Sbjct: 181 RRTDPEKPSNISGSRRTETEKPAGISGSRRTEPEKPSNISGSRRTEPEKPAVVPRPPTPF 240

Query: 241 NRPTDPQKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRK 300
           NRPTDPQKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRK
Sbjct: 241 NRPTDPQKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRK 300

Query: 301 YDESQAAGVKRSKREKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQT 360
           YDESQAAGVKRSKREKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQT
Sbjct: 301 YDESQAAGVKRSKREKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQT 360

Query: 361 GDLPVSCSCC 371
           GDLPVSCSCC
Sbjct: 361 GDLPVSCSCC 370

[Close]
BLAST of Carg17299 vs. NCBI nr
Match: XP_022945434.1 (remorin 4.1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 693.0 bits (1787), Expect = 1.4e-195
Identity = 364/370 (98.38%), Postives = 364/370 (98.38%), Query Frame = 0 

Query: 1   MDQWVTTDEDIDRQQRGSRTQTYLFPLKSQSSREKTTAGWLGRQFLQQMSRGNEFSDDEI 60
           MDQWVTTDEDID QQRGSRTQTYLFPLKSQSSREKTTAGWLGRQFLQQMSRGNEFSDDEI
Sbjct: 1   MDQWVTTDEDIDGQQRGSRTQTYLFPLKSQSSREKTTAGWLGRQFLQQMSRGNEFSDDEI 60

Query: 61  ERVTAVAAAAYAIHSIQNSEIARRRKNADYPETSSFPKFTHLKEDNRPPTPRPAPESAKL 120
           ERVTAVAAAAYAIHSIQNSEIARRRKNADYPETSSFPKFTHLKEDNRPPTPRPAPE AKL
Sbjct: 61  ERVTAVAAAAYAIHSIQNSEIARRRKNADYPETSSFPKFTHLKEDNRPPTPRPAPEPAKL 120

Query: 121 SRRLIDKDHLQDPEQSQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETAFSGNKPDTSGS 180
           SRRLI  DHLQDPEQSQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETAFSGNKPDTSGS
Sbjct: 121 SRRLI--DHLQDPEQSQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETAFSGNKPDTSGS 180

Query: 181 RRTDPEKPSNISGSRRIETEKPAGISGSRRTEPEKPSNISGSRRTEAEKPAVVPRPPTPF 240
           RRTDPEKPSNISGSRR ETEKPAGISGSRRTEPEKPSNISGSRRTE EKPAVVPRPPTPF
Sbjct: 181 RRTDPEKPSNISGSRRTETEKPAGISGSRRTEPEKPSNISGSRRTEPEKPAVVPRPPTPF 240

Query: 241 NRPTDPQKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRK 300
           NRPTDPQKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRK
Sbjct: 241 NRPTDPQKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRK 300

Query: 301 YDESQAAGVKRSKREKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQT 360
           YDESQAAGVKRSKREKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQT
Sbjct: 301 YDESQAAGVKRSKREKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQT 360

Query: 361 GDLPVSCSCC 371
           GDLPVSCSCC
Sbjct: 361 GDLPVSCSCC 368

[Close]
BLAST of Carg17299 vs. NCBI nr
Match: KAG6574053.1 (hypothetical protein SDJN03_27940, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 691.0 bits (1782), Expect = 5.5e-195
Identity = 363/370 (98.11%), Postives = 363/370 (98.11%), Query Frame = 0 

Query: 1   MDQWVTTDEDIDRQQRGSRTQTYLFPLKSQSSREKTTAGWLGRQFLQQMSRGNEFSDDEI 60
           MDQWVTTDEDIDRQQRGSRTQTYLFPLKSQSSREKTTAGWLGRQFLQQMSRGNEFSDDEI
Sbjct: 1   MDQWVTTDEDIDRQQRGSRTQTYLFPLKSQSSREKTTAGWLGRQFLQQMSRGNEFSDDEI 60

Query: 61  ERVTAVAAAAYAIHSIQNSEIARRRKNADYPETSSFPKFTHLKEDNRPPTPRPAPESAKL 120
           ERVTAVAAAAYAIHSIQNSEIARRRKNADYPETSSFPKFTHLKEDNRPPTPRPAPE AKL
Sbjct: 61  ERVTAVAAAAYAIHSIQNSEIARRRKNADYPETSSFPKFTHLKEDNRPPTPRPAPEPAKL 120

Query: 121 SRRLIDKDHLQDPEQSQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETAFSGNKPDTSGS 180
           SRRLI  DHLQDPEQSQRRNVSV HEQPKRKPTENTTDPGSRPYFKETAFSGNKPDTSGS
Sbjct: 121 SRRLI--DHLQDPEQSQRRNVSVAHEQPKRKPTENTTDPGSRPYFKETAFSGNKPDTSGS 180

Query: 181 RRTDPEKPSNISGSRRIETEKPAGISGSRRTEPEKPSNISGSRRTEAEKPAVVPRPPTPF 240
           RRTDPEKPSNISGSRR ETEKPAGISGSRRTEPEKPSNISGSRRTE EKPAVVPRPPTPF
Sbjct: 181 RRTDPEKPSNISGSRRTETEKPAGISGSRRTEPEKPSNISGSRRTEPEKPAVVPRPPTPF 240

Query: 241 NRPTDPQKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRK 300
           NRPTDPQKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVI TVSYWERKKRDKARRK
Sbjct: 241 NRPTDPQKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVIGTVSYWERKKRDKARRK 300

Query: 301 YDESQAAGVKRSKREKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQT 360
           YDESQAAGVKRSKREKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQT
Sbjct: 301 YDESQAAGVKRSKREKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQT 360

Query: 361 GDLPVSCSCC 371
           GDLPVSCSCC
Sbjct: 361 GDLPVSCSCC 368

[Close]
BLAST of Carg17299 vs. NCBI nr
Match: XP_022945435.1 (remorin 4.1-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 676.0 bits (1743), Expect = 1.8e-190
Identity = 356/370 (96.22%), Postives = 356/370 (96.22%), Query Frame = 0 

Query: 1   MDQWVTTDEDIDRQQRGSRTQTYLFPLKSQSSREKTTAGWLGRQFLQQMSRGNEFSDDEI 60
           MDQWVTTDEDID QQRGSRTQTYLFPLKSQSSREKTTAGWLGRQFLQQMSRGNEFSDDEI
Sbjct: 1   MDQWVTTDEDIDGQQRGSRTQTYLFPLKSQSSREKTTAGWLGRQFLQQMSRGNEFSDDEI 60

Query: 61  ERVTAVAAAAYAIHSIQNSEIARRRKNADYPETSSFPKFTHLKEDNRPPTPRPAPESAKL 120
           ERVTAVAAAAYAIHSIQNSEIARRRKNADYPETSSFPKFTHLKEDNRPPTPRPAPE AKL
Sbjct: 61  ERVTAVAAAAYAIHSIQNSEIARRRKNADYPETSSFPKFTHLKEDNRPPTPRPAPEPAKL 120

Query: 121 SRRLIDKDHLQDPEQSQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETAFSGNKPDTSGS 180
           SRRLIDKDHLQDPEQSQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETAFSGNKPDTSGS
Sbjct: 121 SRRLIDKDHLQDPEQSQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETAFSGNKPDTSGS 180

Query: 181 RRTDPEKPSNISGSRRIETEKPAGISGSRRTEPEKPSNISGSRRTEAEKPAVVPRPPTPF 240
           RRTDPEKPSNISGSRR ETEKPAGISGSRRTEPEKP           EKPAVVPRPPTPF
Sbjct: 181 RRTDPEKPSNISGSRRTETEKPAGISGSRRTEPEKP-----------EKPAVVPRPPTPF 240

Query: 241 NRPTDPQKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRK 300
           NRPTDPQKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRK
Sbjct: 241 NRPTDPQKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRK 300

Query: 301 YDESQAAGVKRSKREKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQT 360
           YDESQAAGVKRSKREKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQT
Sbjct: 301 YDESQAAGVKRSKREKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQT 359

Query: 361 GDLPVSCSCC 371
           GDLPVSCSCC
Sbjct: 361 GDLPVSCSCC 359

[Close]
BLAST of Carg17299 vs. ExPASy TrEMBL
Match: A0A6J1G0V8 (neurofilament medium polypeptide-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449668 PE=3 SV=1)

HSP 1 Score: 701.8 bits (1810), Expect = 1.5e-198
Identity = 366/370 (98.92%), Postives = 366/370 (98.92%), Query Frame = 0 

Query: 1   MDQWVTTDEDIDRQQRGSRTQTYLFPLKSQSSREKTTAGWLGRQFLQQMSRGNEFSDDEI 60
           MDQWVTTDEDID QQRGSRTQTYLFPLKSQSSREKTTAGWLGRQFLQQMSRGNEFSDDEI
Sbjct: 1   MDQWVTTDEDIDGQQRGSRTQTYLFPLKSQSSREKTTAGWLGRQFLQQMSRGNEFSDDEI 60

Query: 61  ERVTAVAAAAYAIHSIQNSEIARRRKNADYPETSSFPKFTHLKEDNRPPTPRPAPESAKL 120
           ERVTAVAAAAYAIHSIQNSEIARRRKNADYPETSSFPKFTHLKEDNRPPTPRPAPE AKL
Sbjct: 61  ERVTAVAAAAYAIHSIQNSEIARRRKNADYPETSSFPKFTHLKEDNRPPTPRPAPEPAKL 120

Query: 121 SRRLIDKDHLQDPEQSQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETAFSGNKPDTSGS 180
           SRRLIDKDHLQDPEQSQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETAFSGNKPDTSGS
Sbjct: 121 SRRLIDKDHLQDPEQSQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETAFSGNKPDTSGS 180

Query: 181 RRTDPEKPSNISGSRRIETEKPAGISGSRRTEPEKPSNISGSRRTEAEKPAVVPRPPTPF 240
           RRTDPEKPSNISGSRR ETEKPAGISGSRRTEPEKPSNISGSRRTE EKPAVVPRPPTPF
Sbjct: 181 RRTDPEKPSNISGSRRTETEKPAGISGSRRTEPEKPSNISGSRRTEPEKPAVVPRPPTPF 240

Query: 241 NRPTDPQKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRK 300
           NRPTDPQKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRK
Sbjct: 241 NRPTDPQKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRK 300

Query: 301 YDESQAAGVKRSKREKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQT 360
           YDESQAAGVKRSKREKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQT
Sbjct: 301 YDESQAAGVKRSKREKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQT 360

Query: 361 GDLPVSCSCC 371
           GDLPVSCSCC
Sbjct: 361 GDLPVSCSCC 370

[Close]
BLAST of Carg17299 vs. ExPASy TrEMBL
Match: A0A6J1G0Z0 (remorin 4.1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111449668 PE=3 SV=1)

HSP 1 Score: 693.0 bits (1787), Expect = 7.0e-196
Identity = 364/370 (98.38%), Postives = 364/370 (98.38%), Query Frame = 0 

Query: 1   MDQWVTTDEDIDRQQRGSRTQTYLFPLKSQSSREKTTAGWLGRQFLQQMSRGNEFSDDEI 60
           MDQWVTTDEDID QQRGSRTQTYLFPLKSQSSREKTTAGWLGRQFLQQMSRGNEFSDDEI
Sbjct: 1   MDQWVTTDEDIDGQQRGSRTQTYLFPLKSQSSREKTTAGWLGRQFLQQMSRGNEFSDDEI 60

Query: 61  ERVTAVAAAAYAIHSIQNSEIARRRKNADYPETSSFPKFTHLKEDNRPPTPRPAPESAKL 120
           ERVTAVAAAAYAIHSIQNSEIARRRKNADYPETSSFPKFTHLKEDNRPPTPRPAPE AKL
Sbjct: 61  ERVTAVAAAAYAIHSIQNSEIARRRKNADYPETSSFPKFTHLKEDNRPPTPRPAPEPAKL 120

Query: 121 SRRLIDKDHLQDPEQSQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETAFSGNKPDTSGS 180
           SRRLI  DHLQDPEQSQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETAFSGNKPDTSGS
Sbjct: 121 SRRLI--DHLQDPEQSQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETAFSGNKPDTSGS 180

Query: 181 RRTDPEKPSNISGSRRIETEKPAGISGSRRTEPEKPSNISGSRRTEAEKPAVVPRPPTPF 240
           RRTDPEKPSNISGSRR ETEKPAGISGSRRTEPEKPSNISGSRRTE EKPAVVPRPPTPF
Sbjct: 181 RRTDPEKPSNISGSRRTETEKPAGISGSRRTEPEKPSNISGSRRTEPEKPAVVPRPPTPF 240

Query: 241 NRPTDPQKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRK 300
           NRPTDPQKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRK
Sbjct: 241 NRPTDPQKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRK 300

Query: 301 YDESQAAGVKRSKREKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQT 360
           YDESQAAGVKRSKREKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQT
Sbjct: 301 YDESQAAGVKRSKREKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQT 360

Query: 361 GDLPVSCSCC 371
           GDLPVSCSCC
Sbjct: 361 GDLPVSCSCC 368

[Close]
BLAST of Carg17299 vs. ExPASy TrEMBL
Match: A0A6J1G0X6 (remorin 4.1-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111449668 PE=3 SV=1)

HSP 1 Score: 676.0 bits (1743), Expect = 8.8e-191
Identity = 356/370 (96.22%), Postives = 356/370 (96.22%), Query Frame = 0 

Query: 1   MDQWVTTDEDIDRQQRGSRTQTYLFPLKSQSSREKTTAGWLGRQFLQQMSRGNEFSDDEI 60
           MDQWVTTDEDID QQRGSRTQTYLFPLKSQSSREKTTAGWLGRQFLQQMSRGNEFSDDEI
Sbjct: 1   MDQWVTTDEDIDGQQRGSRTQTYLFPLKSQSSREKTTAGWLGRQFLQQMSRGNEFSDDEI 60

Query: 61  ERVTAVAAAAYAIHSIQNSEIARRRKNADYPETSSFPKFTHLKEDNRPPTPRPAPESAKL 120
           ERVTAVAAAAYAIHSIQNSEIARRRKNADYPETSSFPKFTHLKEDNRPPTPRPAPE AKL
Sbjct: 61  ERVTAVAAAAYAIHSIQNSEIARRRKNADYPETSSFPKFTHLKEDNRPPTPRPAPEPAKL 120

Query: 121 SRRLIDKDHLQDPEQSQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETAFSGNKPDTSGS 180
           SRRLIDKDHLQDPEQSQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETAFSGNKPDTSGS
Sbjct: 121 SRRLIDKDHLQDPEQSQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETAFSGNKPDTSGS 180

Query: 181 RRTDPEKPSNISGSRRIETEKPAGISGSRRTEPEKPSNISGSRRTEAEKPAVVPRPPTPF 240
           RRTDPEKPSNISGSRR ETEKPAGISGSRRTEPEKP           EKPAVVPRPPTPF
Sbjct: 181 RRTDPEKPSNISGSRRTETEKPAGISGSRRTEPEKP-----------EKPAVVPRPPTPF 240

Query: 241 NRPTDPQKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRK 300
           NRPTDPQKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRK
Sbjct: 241 NRPTDPQKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRK 300

Query: 301 YDESQAAGVKRSKREKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQT 360
           YDESQAAGVKRSKREKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQT
Sbjct: 301 YDESQAAGVKRSKREKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQT 359

Query: 361 GDLPVSCSCC 371
           GDLPVSCSCC
Sbjct: 361 GDLPVSCSCC 359

[Close]
BLAST of Carg17299 vs. ExPASy TrEMBL
Match: A0A6J1G0U8 (muscle M-line assembly protein unc-89-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111449668 PE=3 SV=1)

HSP 1 Score: 673.7 bits (1737), Expect = 4.4e-190
Identity = 355/370 (95.95%), Postives = 355/370 (95.95%), Query Frame = 0 

Query: 1   MDQWVTTDEDIDRQQRGSRTQTYLFPLKSQSSREKTTAGWLGRQFLQQMSRGNEFSDDEI 60
           MDQWVTTDEDID QQRGSRTQTYLFPLKSQSSREKTTAGWLGRQFLQQMSRGNEFSDDEI
Sbjct: 1   MDQWVTTDEDIDGQQRGSRTQTYLFPLKSQSSREKTTAGWLGRQFLQQMSRGNEFSDDEI 60

Query: 61  ERVTAVAAAAYAIHSIQNSEIARRRKNADYPETSSFPKFTHLKEDNRPPTPRPAPESAKL 120
           ERVTAVAAAAYAIHSIQNSEIARRRKNADYPETSSFPKFTHLKEDNRPPTPRPAPE AKL
Sbjct: 61  ERVTAVAAAAYAIHSIQNSEIARRRKNADYPETSSFPKFTHLKEDNRPPTPRPAPEPAKL 120

Query: 121 SRRLIDKDHLQDPEQSQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETAFSGNKPDTSGS 180
           SRRLIDKDHLQDPEQSQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETAFSGNKPDTSGS
Sbjct: 121 SRRLIDKDHLQDPEQSQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETAFSGNKPDTSGS 180

Query: 181 RRTDPEKPSNISGSRRIETEKPAGISGSRRTEPEKPSNISGSRRTEAEKPAVVPRPPTPF 240
           RRTDPEKPSNISGSRR ETEK           PEKPSNISGSRRTE EKPAVVPRPPTPF
Sbjct: 181 RRTDPEKPSNISGSRRTETEK-----------PEKPSNISGSRRTEPEKPAVVPRPPTPF 240

Query: 241 NRPTDPQKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRK 300
           NRPTDPQKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRK
Sbjct: 241 NRPTDPQKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRK 300

Query: 301 YDESQAAGVKRSKREKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQT 360
           YDESQAAGVKRSKREKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQT
Sbjct: 301 YDESQAAGVKRSKREKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQT 359

Query: 361 GDLPVSCSCC 371
           GDLPVSCSCC
Sbjct: 361 GDLPVSCSCC 359

[Close]
BLAST of Carg17299 vs. ExPASy TrEMBL
Match: A0A6J1G0X5 (uncharacterized protein LOC111449668 isoform X5 OS=Cucurbita moschata OX=3662 GN=LOC111449668 PE=3 SV=1)

HSP 1 Score: 645.6 bits (1664), Expect = 1.3e-181
Identity = 342/370 (92.43%), Postives = 342/370 (92.43%), Query Frame = 0 

Query: 1   MDQWVTTDEDIDRQQRGSRTQTYLFPLKSQSSREKTTAGWLGRQFLQQMSRGNEFSDDEI 60
           MDQWVTTDEDID QQRGSRTQTYLFPLKSQSSREKTTAGWLGRQFLQQMSRGNEFSDDEI
Sbjct: 1   MDQWVTTDEDIDGQQRGSRTQTYLFPLKSQSSREKTTAGWLGRQFLQQMSRGNEFSDDEI 60

Query: 61  ERVTAVAAAAYAIHSIQNSEIARRRKNADYPETSSFPKFTHLKEDNRPPTPRPAPESAKL 120
           ERVTAVAAAAYAIHSIQNSEIARRRKNADYPETSSFPKFTHLKEDNRPPTPRPAPE AKL
Sbjct: 61  ERVTAVAAAAYAIHSIQNSEIARRRKNADYPETSSFPKFTHLKEDNRPPTPRPAPEPAKL 120

Query: 121 SRRLIDKDHLQDPEQSQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETAFSGNKPDTSGS 180
           SRRLIDKDHLQDPEQSQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETAFSGNKPDTSGS
Sbjct: 121 SRRLIDKDHLQDPEQSQRRNVSVTHEQPKRKPTENTTDPGSRPYFKETAFSGNKPDTSGS 180

Query: 181 RRTDPEKPSNISGSRRIETEKPAGISGSRRTEPEKPSNISGSRRTEAEKPAVVPRPPTPF 240
           RRTDPEK                         PEKPSNISGSRRTE EKPAVVPRPPTPF
Sbjct: 181 RRTDPEK-------------------------PEKPSNISGSRRTEPEKPAVVPRPPTPF 240

Query: 241 NRPTDPQKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRK 300
           NRPTDPQKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRK
Sbjct: 241 NRPTDPQKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRK 300

Query: 301 YDESQAAGVKRSKREKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQT 360
           YDESQAAGVKRSKREKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQT
Sbjct: 301 YDESQAAGVKRSKREKGIKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQT 345

Query: 361 GDLPVSCSCC 371
           GDLPVSCSCC
Sbjct: 361 GDLPVSCSCC 345

[Close]
BLAST of Carg17299 vs. TAIR 10
Match: AT1G13920.1 (Remorin family protein )

HSP 1 Score: 99.8 bits (247), Expect = 5.0e-21
Identity = 107/350 (30.57%), Postives = 162/350 (46.29%), Query Frame = 0 

Query: 28  KSQSSRE--KTTAGWLGRQFLQQMSRGNEFSDDEIERVTAVAAAAYAIHSIQNSEIARRR 87
           KS S +E  K  + WL +QF +QMS  +     E++   AVAA AYAI + + + +    
Sbjct: 35  KSVSFKEDKKKPSNWLQKQFSRQMSGQSYDPIGEMDHAAAVAATAYAIATFEETWLENYH 94

Query: 88  KNADYPETSSFPKFTHLKEDNRPPTPRPAPESAKLSRRLIDKDHLQDPEQSQRRNVSVTH 147
              +   +SS       +  +R     P  E   LSRR   +    D E    +    T 
Sbjct: 95  SGLELGPSSS-------RSKSRSEELLPLEEPRSLSRRFSGQLSFIDSETKDHK--PPTL 154

Query: 148 EQPKRKPTENTTDPGSRPYFKETAFSGNKPDTSGSRRTDPEKPSNISGSRRIETEKPAGI 207
           + P RK                   S  K   S +   D  K +  S  +     KP   
Sbjct: 155 KSPMRKS------------------SSVKKTFSMNLMGDHTKQNQDSEEKHERQRKPV-- 214

Query: 208 SGSRRTEPEKPSNISGSRRTEAEKPAVVPRPPTPFNRPTDPQKPLPTQTRPYDSRETK-- 267
                    +P  I    RT +E P   P PP P   P+  + P P +T+   S  T   
Sbjct: 215 --------SEPPRIQPPLRTRSE-PRAPPPPPPPLLSPSPLRLP-PRETKRQSSEHTSRK 274

Query: 268 ----ADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRKYDESQAAGVKRSKREKGIK 327
               AD WEKAE++KI  R+ K+   +  WE KKR+KARRK D S+ + +++ +R++G++
Sbjct: 275 DDSTADAWEKAELSKIKARYEKLNRKIDLWEAKKREKARRKLDISEQSELEQ-RRKRGLQ 334

Query: 328 KFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQTGDLPVSCSC 370
           +F ED ++I+QIA  ARA+A++ R++   K  +KA +IR TG LP +  C
Sbjct: 335 RFREDTEYIEQIAAGARAQAEKDRQSKEFKVKEKAGVIRSTGKLPGNACC 344

[Close]
BLAST of Carg17299 vs. TAIR 10
Match: AT1G69325.1 (Remorin family protein )

HSP 1 Score: 58.9 bits (141), Expect = 9.8e-09
Identity = 36/103 (34.95%), Postives = 65/103 (63.11%), Query Frame = 0 

Query: 265 DQWEKAEMAKINERFHKVIETVSYWERKKRDKARRKYDESQAAGVKRSKREKGIKKFEED 324
           DQW++ E++K  +++ K+ E +  WE KKR KA+RK   ++ + V+++K  K  ++F ++
Sbjct: 19  DQWKETEISKSRKKYEKLSEKIVSWEDKKRKKAKRKLHRTERS-VEKTKL-KATQRFRDE 78

Query: 325 MDFIKQIAEEARAKADQKRRNDILKANQKADIIRQTGDLPVSC 368
            + I+ I   ARA A + R  + LK  +KA+++R TG  P +C
Sbjct: 79  NERIEIIVASARAHAYESRIKEELKVKEKANLMRTTGRKPSTC 119

[Close]
BLAST of Carg17299 vs. TAIR 10
Match: AT1G67590.1 (Remorin family protein )

HSP 1 Score: 48.5 bits (114), Expect = 1.3e-05
Identity = 34/108 (31.48%), Postives = 56/108 (51.85%), Query Frame = 0 

Query: 261 ETKADQWEKAEMAKINERFHKVIETVSYWERKKRDKARRKYDESQAAGVKRSKREKGIKK 320
           E +A  W++AE AK   R+ +    +  WE  ++ KA  +  + +    +   R +  +K
Sbjct: 230 EARAMAWDEAERAKFMARYKREEVKIQAWENHEKRKAEMEMKKMEVKAERMKARAE--EK 289

Query: 321 FEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQTGDLPVSCS 369
               +   K+IAEE RA A+ K     +K ++KAD IR++G LP S S
Sbjct: 290 LANKLAATKRIAEERRANAEAKLNEKAVKTSEKADYIRRSGHLPSSFS 335

[Close]
BLAST of Carg17299 vs. TAIR 10
Match: AT1G30320.1 (Remorin family protein )

HSP 1 Score: 43.9 bits (102), Expect = 3.3e-04
Identity = 37/114 (32.46%), Postives = 59/114 (51.75%), Query Frame = 0 

Query: 261 ETKADQWEKAEMAKINERFHKVIETVSYWERKKRDK--ARRKYDESQAAGVKRSKREKGI 320
           E +A  WE+AE +K N R+ +    +  WE +++ K  A  +  E++   +K     K +
Sbjct: 396 EKRATAWEEAEKSKHNARYKREEIRIQAWESQEKAKLEAEMRRIEAKVEQMKAEAEAKIM 455

Query: 321 KKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQTGDLPVSC--SCC 371
           KK    +   KQ +EE RA A+ ++  D  KA  +A  IR+TG +P S    CC
Sbjct: 456 KK----IALAKQRSEEKRALAEARKTRDAEKAVAEAQYIRETGRIPASSYKICC 505

The following BLAST results are available for this feature:
BLAST of Carg17299 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7013112.18.7e-201100.00hypothetical protein SDJN02_25868 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022945433.13.1e-19898.92neurofilament medium polypeptide-like isoform X1 [Cucurbita moschata][more]
XP_022945434.11.4e-19598.38remorin 4.1-like isoform X2 [Cucurbita moschata][more]
KAG6574053.15.5e-19598.11hypothetical protein SDJN03_27940, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022945435.11.8e-19096.22remorin 4.1-like isoform X3 [Cucurbita moschata][more]
BLAST of Carg17299 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg17299 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1G0V81.5e-19898.92neurofilament medium polypeptide-like isoform X1 OS=Cucurbita moschata OX=3662 G... [more]
A0A6J1G0Z07.0e-19698.38remorin 4.1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111449668 PE=3 S... [more]
A0A6J1G0X68.8e-19196.22remorin 4.1-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111449668 PE=3 S... [more]
A0A6J1G0U84.4e-19095.95muscle M-line assembly protein unc-89-like isoform X4 OS=Cucurbita moschata OX=3... [more]
A0A6J1G0X51.3e-18192.43uncharacterized protein LOC111449668 isoform X5 OS=Cucurbita moschata OX=3662 GN... [more]
BLAST of Carg17299 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G13920.15.0e-2130.57Remorin family protein [more]
AT1G69325.19.8e-0934.95Remorin family protein [more]
AT1G67590.11.3e-0531.48Remorin family protein [more]
AT1G30320.13.3e-0432.46Remorin family protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 318..345
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..194
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 232..250
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..135
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 294..315
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..266
NoneNo IPR availablePANTHERPTHR31471:SF51REMORIN FAMILY PROTEINcoord: 13..370
NoneNo IPR availablePANTHERPTHR31471OS02G0116800 PROTEINcoord: 13..370
IPR005516Remorin, C-terminalPFAMPF03763Remorin_Ccoord: 259..365
e-value: 4.6E-20
score: 71.5

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg17299-RACarg17299-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010033 response to organic substance
biological_process GO:1901700 response to oxygen-containing compound
biological_process GO:0006950 response to stress