Carg17284 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg17284
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCASP-like protein
LocationCarg_Chr18: 10757562 .. 10758466 (-)
RNA-Seq ExpressionCarg17284
SyntenyCarg17284
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATGGATCAGTCAAAGGCAAAATCAGAGGGTGAAGTGCCATTGGGTTCAAAAATTAGATACCCATTTGGAGGAGGAGGGGCTCAGAGAGGGCTGCCCATAGTGGACTTAGTGCTGAGAGTAGTGGCACTCATGGGTACTCTGTGCAGTGCCATTGTAATGGGCACAGCCAGTCAAACTCTCCCCTTTTCAACTCAGTCGACTCAATTCAAAGCCGTTTATAAGGATCTTCCTATGTTTATGTAATCTCGAACCTCGAATTTCTTGTTTATGTTTTGACTAGTTAAGCTATGTTGTCGATGCACCTTTTTTTATTGTTATAGGTTTTTCGTGCTTGCGAATTCGGTAGCTTGTGGGTATCTCTTTCTTTCGCTACCTCTATCCATCTTCCAAATGGTGAAAGTTGCATCAGTCACTCCAAGGCTCACTTTGCTCATCTTTGACACGGTATGTTTTGTTTGTGTAGTTTTTTTCTTCCATTTTTGCTCATTTGTTGTGCATTTGGTGGTTGTTTATGAATGATTTAAATATTCATGTAAGATGGCTATGGCTCTTGTGACGGCGGGCGCTTCGGTTGCGGCGTCTGTGGTTTACTTGGCGTATCAGGGCAACACGGTTGTCAATTGGGCCTCGTTTTGCTCCCAATTCAACTCCTTTTGTCGACGTAGCTCTCAATCTTTAATCGGCTCTTTTGGTGCAGTTCTTGTTTTGGTGCTTATGATTACTCTTTCGGCTATAGCTATGTCTCGACGCATCACGAACACTCAACCTTATAATTTATGAATCAGAAACTTGAACGTGTATAGGTCAAAGAGTTTATGTTGTTAAATATCAAGAAAGTGGAGAATTCGAACTTATGACCTCTTAATTGAGAGTAAACGTTTAATGCTAGTTGAACTATG

mRNA sequence

ATGGAAATGGATCAGTCAAAGGCAAAATCAGAGGGTGAAGTGCCATTGGGTTCAAAAATTAGATACCCATTTGGAGGAGGAGGGGCTCAGAGAGGGCTGCCCATAGTGGACTTAGTGCTGAGAGTAGTGGCACTCATGGGTACTCTGTGCAGTGCCATTGTAATGGGCACAGCCAGTCAAACTCTCCCCTTTTCAACTCAGTCGACTCAATTCAAAGCCGTTTATAAGGATCTTCCTATGTTTATGTTTTTCGTGCTTGCGAATTCGGTAGCTTGTGGGTATCTCTTTCTTTCGCTACCTCTATCCATCTTCCAAATGGTGAAAGTTGCATCAGTCACTCCAAGGCTCACTTTGCTCATCTTTGACACGATGGCTATGGCTCTTGTGACGGCGGGCGCTTCGGTTGCGGCGTCTGTGGTTTACTTGGCGTATCAGGGCAACACGGTTGTCAATTGGGCCTCGTTTTGCTCCCAATTCAACTCCTTTTGTCGACGTAGCTCTCAATCTTTAATCGGCTCTTTTGGTGCAGTTCTTGTTTTGGTGCTTATGATTACTCTTTCGGCTATAGCTATGTCTCGACGCATCACGAACACTCAACCTTATAATTTATGAATCAGAAACTTGAACGTGTATAGGTCAAAGAGTTTATGTTGTTAAATATCAAGAAAGTGGAGAATTCGAACTTATGACCTCTTAATTGAGAGTAAACGTTTAATGCTAGTTGAACTATG

Coding sequence (CDS)

ATGGAAATGGATCAGTCAAAGGCAAAATCAGAGGGTGAAGTGCCATTGGGTTCAAAAATTAGATACCCATTTGGAGGAGGAGGGGCTCAGAGAGGGCTGCCCATAGTGGACTTAGTGCTGAGAGTAGTGGCACTCATGGGTACTCTGTGCAGTGCCATTGTAATGGGCACAGCCAGTCAAACTCTCCCCTTTTCAACTCAGTCGACTCAATTCAAAGCCGTTTATAAGGATCTTCCTATGTTTATGTTTTTCGTGCTTGCGAATTCGGTAGCTTGTGGGTATCTCTTTCTTTCGCTACCTCTATCCATCTTCCAAATGGTGAAAGTTGCATCAGTCACTCCAAGGCTCACTTTGCTCATCTTTGACACGATGGCTATGGCTCTTGTGACGGCGGGCGCTTCGGTTGCGGCGTCTGTGGTTTACTTGGCGTATCAGGGCAACACGGTTGTCAATTGGGCCTCGTTTTGCTCCCAATTCAACTCCTTTTGTCGACGTAGCTCTCAATCTTTAATCGGCTCTTTTGGTGCAGTTCTTGTTTTGGTGCTTATGATTACTCTTTCGGCTATAGCTATGTCTCGACGCATCACGAACACTCAACCTTATAATTTATGA

Protein sequence

MEMDQSKAKSEGEVPLGSKIRYPFGGGGAQRGLPIVDLVLRVVALMGTLCSAIVMGTASQTLPFSTQSTQFKAVYKDLPMFMFFVLANSVACGYLFLSLPLSIFQMVKVASVTPRLTLLIFDTMAMALVTAGASVAASVVYLAYQGNTVVNWASFCSQFNSFCRRSSQSLIGSFGAVLVLVLMITLSAIAMSRRITNTQPYNL
Homology
BLAST of Carg17284 vs. NCBI nr
Match: KAG7013128.1 (Casparian strip membrane protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 376.7 bits (966), Expect = 1.3e-100
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0

Query: 1   MEMDQSKAKSEGEVPLGSKIRYPFGGGGAQRGLPIVDLVLRVVALMGTLCSAIVMGTASQ 60
           MEMDQSKAKSEGEVPLGSKIRYPFGGGGAQRGLPIVDLVLRVVALMGTLCSAIVMGTASQ
Sbjct: 1   MEMDQSKAKSEGEVPLGSKIRYPFGGGGAQRGLPIVDLVLRVVALMGTLCSAIVMGTASQ 60

Query: 61  TLPFSTQSTQFKAVYKDLPMFMFFVLANSVACGYLFLSLPLSIFQMVKVASVTPRLTLLI 120
           TLPFSTQSTQFKAVYKDLPMFMFFVLANSVACGYLFLSLPLSIFQMVKVASVTPRLTLLI
Sbjct: 61  TLPFSTQSTQFKAVYKDLPMFMFFVLANSVACGYLFLSLPLSIFQMVKVASVTPRLTLLI 120

Query: 121 FDTMAMALVTAGASVAASVVYLAYQGNTVVNWASFCSQFNSFCRRSSQSLIGSFGAVLVL 180
           FDTMAMALVTAGASVAASVVYLAYQGNTVVNWASFCSQFNSFCRRSSQSLIGSFGAVLVL
Sbjct: 121 FDTMAMALVTAGASVAASVVYLAYQGNTVVNWASFCSQFNSFCRRSSQSLIGSFGAVLVL 180

Query: 181 VLMITLSAIAMSRRITNTQPYNL 204
           VLMITLSAIAMSRRITNTQPYNL
Sbjct: 181 VLMITLSAIAMSRRITNTQPYNL 203

BLAST of Carg17284 vs. NCBI nr
Match: KAG6574068.1 (Casparian strip membrane protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 373.6 bits (958), Expect = 1.1e-99
Identity = 201/203 (99.01%), Postives = 201/203 (99.01%), Query Frame = 0

Query: 1   MEMDQSKAKSEGEVPLGSKIRYPFGGGGAQRGLPIVDLVLRVVALMGTLCSAIVMGTASQ 60
           MEMDQSKAKSEGEVPLGSKIRYPFGGGGAQRGLPIVDLVLRVVALMGTLCSAIVMGTASQ
Sbjct: 1   MEMDQSKAKSEGEVPLGSKIRYPFGGGGAQRGLPIVDLVLRVVALMGTLCSAIVMGTASQ 60

Query: 61  TLPFSTQSTQFKAVYKDLPMFMFFVLANSVACGYLFLSLPLSIFQMVKVASVTPRLTLLI 120
           TLPFSTQSTQFKAVYKDLPMFMFFVLANSVACGYLFLSLPLSIFQMVKVASVTPRLTLLI
Sbjct: 61  TLPFSTQSTQFKAVYKDLPMFMFFVLANSVACGYLFLSLPLSIFQMVKVASVTPRLTLLI 120

Query: 121 FDTMAMALVTAGASVAASVVYLAYQGNTVVNWASFCSQFNSFCRRSSQSLIGSFGAVLVL 180
           FDTMAMALVTAG SVA SVVYLAYQGNTVVNWASFCSQFNSFCRRSSQSLIGSFGAVLVL
Sbjct: 121 FDTMAMALVTAGTSVATSVVYLAYQGNTVVNWASFCSQFNSFCRRSSQSLIGSFGAVLVL 180

Query: 181 VLMITLSAIAMSRRITNTQPYNL 204
           VLMITLSAIAMSRRITNTQPYNL
Sbjct: 181 VLMITLSAIAMSRRITNTQPYNL 203

BLAST of Carg17284 vs. NCBI nr
Match: XP_023542035.1 (casparian strip membrane protein 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 362.8 bits (930), Expect = 1.9e-96
Identity = 195/203 (96.06%), Postives = 198/203 (97.54%), Query Frame = 0

Query: 1   MEMDQSKAKSEGEVPLGSKIRYPFGGGGAQRGLPIVDLVLRVVALMGTLCSAIVMGTASQ 60
           MEMDQSKAK EGEVPLGSKIRYPFGGGGAQRGLPIVDLVLRVVALMGTLCSAIVMGTA+Q
Sbjct: 1   MEMDQSKAKPEGEVPLGSKIRYPFGGGGAQRGLPIVDLVLRVVALMGTLCSAIVMGTANQ 60

Query: 61  TLPFSTQSTQFKAVYKDLPMFMFFVLANSVACGYLFLSLPLSIFQMVKVASVTPRLTLLI 120
           TLPFSTQSTQFKAVYKDLPMFMFFVLANSVAC YLF+SLPLSIFQMVKVASVTPRLTLLI
Sbjct: 61  TLPFSTQSTQFKAVYKDLPMFMFFVLANSVACAYLFISLPLSIFQMVKVASVTPRLTLLI 120

Query: 121 FDTMAMALVTAGASVAASVVYLAYQGNTVVNWASFCSQFNSFCRRSSQSLIGSFGAVLVL 180
           FDTMAMALVTAGASVAASVVYLAYQGN VVNWASFCSQFNSFCRRSSQSLIGSFGAVLVL
Sbjct: 121 FDTMAMALVTAGASVAASVVYLAYQGNNVVNWASFCSQFNSFCRRSSQSLIGSFGAVLVL 180

Query: 181 VLMITLSAIAMSRRITNTQPYNL 204
           VL+ITLSAIAMSRRI N QPYNL
Sbjct: 181 VLLITLSAIAMSRRIMNIQPYNL 203

BLAST of Carg17284 vs. NCBI nr
Match: XP_022945632.1 (casparian strip membrane protein 3-like [Cucurbita moschata])

HSP 1 Score: 360.5 bits (924), Expect = 9.3e-96
Identity = 194/203 (95.57%), Postives = 199/203 (98.03%), Query Frame = 0

Query: 1   MEMDQSKAKSEGEVPLGSKIRYPFGGGGAQRGLPIVDLVLRVVALMGTLCSAIVMGTASQ 60
           MEMDQSKAKSEGEVPLGSKIRYPFGGGGA+RGLPIVDLVLRVVALMGTLCSAIVMGTA+Q
Sbjct: 1   MEMDQSKAKSEGEVPLGSKIRYPFGGGGAKRGLPIVDLVLRVVALMGTLCSAIVMGTANQ 60

Query: 61  TLPFSTQSTQFKAVYKDLPMFMFFVLANSVACGYLFLSLPLSIFQMVKVASVTPRLTLLI 120
           TLPFSTQSTQFKAVYKDLPMF+FFVLANSVACGYLFLSLPLSIFQMVKVASVTPRLTLLI
Sbjct: 61  TLPFSTQSTQFKAVYKDLPMFVFFVLANSVACGYLFLSLPLSIFQMVKVASVTPRLTLLI 120

Query: 121 FDTMAMALVTAGASVAASVVYLAYQGNTVVNWASFCSQFNSFCRRSSQSLIGSFGAVLVL 180
           FDTMAMALVTAGASVAASVVYL YQGN VVNWASFCSQFNSFCRRSSQSLIGSFGAV VL
Sbjct: 121 FDTMAMALVTAGASVAASVVYLVYQGNMVVNWASFCSQFNSFCRRSSQSLIGSFGAVFVL 180

Query: 181 VLMITLSAIAMSRRITNTQPYNL 204
           VL+ITLSAIAMS+RITNTQ YNL
Sbjct: 181 VLLITLSAIAMSQRITNTQLYNL 203

BLAST of Carg17284 vs. NCBI nr
Match: XP_022968095.1 (casparian strip membrane protein 3-like [Cucurbita maxima])

HSP 1 Score: 352.8 bits (904), Expect = 1.9e-93
Identity = 192/199 (96.48%), Postives = 194/199 (97.49%), Query Frame = 0

Query: 1   MEMDQSKAKSEGEVPLGSKIRYPFGGGGAQRGLPIVDLVLRVVALMGTLCSAIVMGTASQ 60
           MEMDQSKAKSEGEVPLGSKIRYPFGGGGAQRGL IVDLVLRVVALM TLCSAIVMGTA Q
Sbjct: 1   MEMDQSKAKSEGEVPLGSKIRYPFGGGGAQRGLTIVDLVLRVVALMATLCSAIVMGTAHQ 60

Query: 61  TLPFSTQSTQFKAVYKDLPMFMFFVLANSVACGYLFLSLPLSIFQMVKVASVTPRLTLLI 120
           TLPFSTQSTQFKAVYKDLPMFMFFVL NSVACGYLFLSLPLSIFQMVKVASVTPRLTLLI
Sbjct: 61  TLPFSTQSTQFKAVYKDLPMFMFFVLVNSVACGYLFLSLPLSIFQMVKVASVTPRLTLLI 120

Query: 121 FDTMAMALVTAGASVAASVVYLAYQGNTVVNWASFCSQFNSFCRRSSQSLIGSFGAVLVL 180
           FDTMAMAL TAGASVAASVVYLAYQGNTVVNWASFCSQF+SFCRRSSQSLIGSFGAVLVL
Sbjct: 121 FDTMAMALETAGASVAASVVYLAYQGNTVVNWASFCSQFDSFCRRSSQSLIGSFGAVLVL 180

Query: 181 VLMITLSAIAMSRRITNTQ 200
           VL+ITLSAIAMSRRITNTQ
Sbjct: 181 VLLITLSAIAMSRRITNTQ 199

BLAST of Carg17284 vs. ExPASy Swiss-Prot
Match: C5Z7E3 (Casparian strip membrane protein 3 OS=Sorghum bicolor OX=4558 GN=Sb10g008220 PE=2 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 9.2e-46
Identity = 96/172 (55.81%), Postives = 128/172 (74.42%), Query Frame = 0

Query: 23  PFGGGGAQRGLPIVDLVLRVVALMGTLCSAIVMGTASQTLPFSTQSTQFKAVYKDLPMFM 82
           P G GG  +G+ ++DL+LR +A++GTL SAI MGT ++TLPF TQ  +FKA Y DLP   
Sbjct: 15  PLGRGGVSKGVSVLDLILRFIAIIGTLASAIAMGTTNETLPFFTQFIRFKAQYSDLPTLT 74

Query: 83  FFVLANSVACGYLFLSLPLSIFQMVKVASVTPRLTLLIFDTMAMALVTAGASVAASVVYL 142
           FFV+ANS+ C YL LSLPLSI  +++  +   RL L+  D   +ALVTAGAS AA++VYL
Sbjct: 75  FFVVANSIVCAYLILSLPLSIVHIIRSRAKYSRLLLIFLDAAMLALVTAGASAAAAIVYL 134

Query: 143 AYQGNTVVNWASFCSQFNSFCRRSSQSLIGSFGAVLVLVLMITLSAIAMSRR 195
           A++GN   NW + C QF+SFC R S SLIGSFGA+++L+L+I LSAIA++RR
Sbjct: 135 AHKGNVRANWLAICQQFDSFCERISGSLIGSFGAMVMLILLILLSAIALARR 186

BLAST of Carg17284 vs. ExPASy Swiss-Prot
Match: B9T4E6 (Casparian strip membrane protein 5 OS=Ricinus communis OX=3988 GN=RCOM_0299440 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 9.2e-46
Identity = 100/168 (59.52%), Postives = 128/168 (76.19%), Query Frame = 0

Query: 27  GGAQRGLPIVDLVLRVVALMGTLCSAIVMGTASQTLPFSTQSTQFKAVYKDLPMFMFFVL 86
           GGA RG+ I+D +LR+VAL+GTL SAI+MGT ++TLPF+TQ  +F+A Y DLP F FFV+
Sbjct: 18  GGANRGVSILDFILRLVALVGTLASAILMGTTNETLPFATQFIRFRAEYDDLPTFTFFVV 77

Query: 87  ANSVACGYLFLSLPLSIFQMVKVASVTPRLTLLIFDTMAMALVTAGASVAASVVYLAYQG 146
           AN V  GYL LSLPLSI  +V+  +   R+ L+IFDT  +AL+TAGAS AA++VYLA++G
Sbjct: 78  ANIVVSGYLLLSLPLSIVNIVRSTAKNRRIILIIFDTAMLALLTAGASAAAAIVYLAHKG 137

Query: 147 NTVVNWASFCSQFNSFCRRSSQSLIGSFGAVLVLVLMITLSAIAMSRR 195
           NT  NW + C QFNSFC R S SLIGSF  V V +L+I +SA A+SRR
Sbjct: 138 NTRANWFAICQQFNSFCERISGSLIGSFVGVAVFILLILMSASALSRR 185

BLAST of Carg17284 vs. ExPASy Swiss-Prot
Match: P0DI33 (Casparian strip membrane protein 1 OS=Panicum virgatum OX=38727 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 7.8e-45
Identity = 95/167 (56.89%), Postives = 126/167 (75.45%), Query Frame = 0

Query: 28  GAQRGLPIVDLVLRVVALMGTLCSAIVMGTASQTLPFSTQSTQFKAVYKDLPMFMFFVLA 87
           G  +GL ++DL+LR +A++GTL SAI MGT ++TLPF TQ  +FKA Y DLP   FFV+A
Sbjct: 18  GVSKGLSVLDLILRFIAIIGTLASAIAMGTTNETLPFFTQFIRFKAQYSDLPTLTFFVVA 77

Query: 88  NSVACGYLFLSLPLSIFQMVKVASVTPRLTLLIFDTMAMALVTAGASVAASVVYLAYQGN 147
           NS+ C YL LSLPLSI  +++  +   RL L+  D + +ALVTAGAS AA++VYLA++GN
Sbjct: 78  NSIVCAYLILSLPLSIVHIIRSRAKFSRLLLIFLDAVMLALVTAGASAAAAIVYLAHKGN 137

Query: 148 TVVNWASFCSQFNSFCRRSSQSLIGSFGAVLVLVLMITLSAIAMSRR 195
              NW + C QF+SFC R S SLIGSFGA++VL+L+I LSAIA++RR
Sbjct: 138 VRANWLAICQQFDSFCERISGSLIGSFGAMVVLILLILLSAIALARR 184

BLAST of Carg17284 vs. ExPASy Swiss-Prot
Match: A7PMY7 (Casparian strip membrane protein 3 OS=Vitis vinifera OX=29760 GN=VIT_14s0108g01050 PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.7e-44
Identity = 93/182 (51.10%), Postives = 129/182 (70.88%), Query Frame = 0

Query: 12  GEVPLGSKIRYPFGGGGAQRGLPIVDLVLRVVALMGTLCSAIVMGTASQTLPFSTQSTQF 71
           G + LG   +     GG  RG+ I+D +LR++ ++GTL SAI MGT ++TLPF TQ TQF
Sbjct: 4   GALELGEGSKTSIPRGGVNRGISILDFILRLITIIGTLGSAIAMGTTNETLPFFTQFTQF 63

Query: 72  KAVYKDLPMFMFFVLANSVACGYLFLSLPLSIFQMVKVASVTPRLTLLIFDTMAMALVTA 131
           +A Y DLP F FFV+ANS+  GYL LSLP+SI  +V+  +   R+ L+ FDT  +AL+TA
Sbjct: 64  RAEYDDLPTFTFFVIANSIVSGYLVLSLPMSILHIVRSGARASRIVLIFFDTAMLALLTA 123

Query: 132 GASVAASVVYLAYQGNTVVNWASFCSQFNSFCRRSSQSLIGSFGAVLVLVLMITLSAIAM 191
            AS A+++VYLA++GN   NW + C QF SFC R S SLIGSFG +++ +L++ LSA+A+
Sbjct: 124 AASAASAIVYLAHKGNAQANWFAICQQFKSFCERISGSLIGSFGGIILFILLVLLSAVAL 183

Query: 192 SR 194
           SR
Sbjct: 184 SR 185

BLAST of Carg17284 vs. ExPASy Swiss-Prot
Match: A2YAZ1 (Casparian strip membrane protein 3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_22263 PE=2 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.9e-43
Identity = 100/184 (54.35%), Postives = 129/184 (70.11%), Query Frame = 0

Query: 11  EGEVPLGSKIRYPFGGGGAQRGLPIVDLVLRVVALMGTLCSAIVMGTASQTLPFSTQSTQ 70
           EG    G   + P    G  +G+ I+D++LR VA++GTL SAI MGT +QTLPF TQ  +
Sbjct: 2   EGSEEHGETSKAPL-SRGVSKGVSILDVILRFVAIIGTLASAIAMGTTNQTLPFFTQFIR 61

Query: 71  FKAVYKDLPMFMFFVLANSVACGYLFLSLPLSIFQMVKVASVTPRLTLLIFDTMAMALVT 130
           FKA Y DLP   FFV+ANS+   YL LSLPLSI  +++  +   RL L+ FD   +ALVT
Sbjct: 62  FKAQYSDLPTLTFFVVANSIVSAYLILSLPLSIVHVIRSRAKYSRLILIFFDAAMLALVT 121

Query: 131 AGASVAASVVYLAYQGNTVVNWASFCSQFNSFCRRSSQSLIGSFGAVLVLVLMITLSAIA 190
           AGAS AA++VYLA++GN   NW + C QF+SFC R S SLIGSF A++VLVL+I LSAIA
Sbjct: 122 AGASAAAAIVYLAHKGNARANWLAICQQFDSFCERISGSLIGSFAAMVVLVLLIFLSAIA 181

Query: 191 MSRR 195
           ++RR
Sbjct: 182 LARR 184

BLAST of Carg17284 vs. ExPASy TrEMBL
Match: A0A6J1G1G8 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111449815 PE=3 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 4.5e-96
Identity = 194/203 (95.57%), Postives = 199/203 (98.03%), Query Frame = 0

Query: 1   MEMDQSKAKSEGEVPLGSKIRYPFGGGGAQRGLPIVDLVLRVVALMGTLCSAIVMGTASQ 60
           MEMDQSKAKSEGEVPLGSKIRYPFGGGGA+RGLPIVDLVLRVVALMGTLCSAIVMGTA+Q
Sbjct: 1   MEMDQSKAKSEGEVPLGSKIRYPFGGGGAKRGLPIVDLVLRVVALMGTLCSAIVMGTANQ 60

Query: 61  TLPFSTQSTQFKAVYKDLPMFMFFVLANSVACGYLFLSLPLSIFQMVKVASVTPRLTLLI 120
           TLPFSTQSTQFKAVYKDLPMF+FFVLANSVACGYLFLSLPLSIFQMVKVASVTPRLTLLI
Sbjct: 61  TLPFSTQSTQFKAVYKDLPMFVFFVLANSVACGYLFLSLPLSIFQMVKVASVTPRLTLLI 120

Query: 121 FDTMAMALVTAGASVAASVVYLAYQGNTVVNWASFCSQFNSFCRRSSQSLIGSFGAVLVL 180
           FDTMAMALVTAGASVAASVVYL YQGN VVNWASFCSQFNSFCRRSSQSLIGSFGAV VL
Sbjct: 121 FDTMAMALVTAGASVAASVVYLVYQGNMVVNWASFCSQFNSFCRRSSQSLIGSFGAVFVL 180

Query: 181 VLMITLSAIAMSRRITNTQPYNL 204
           VL+ITLSAIAMS+RITNTQ YNL
Sbjct: 181 VLLITLSAIAMSQRITNTQLYNL 203

BLAST of Carg17284 vs. ExPASy TrEMBL
Match: A0A6J1HW80 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111467431 PE=3 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 9.4e-94
Identity = 192/199 (96.48%), Postives = 194/199 (97.49%), Query Frame = 0

Query: 1   MEMDQSKAKSEGEVPLGSKIRYPFGGGGAQRGLPIVDLVLRVVALMGTLCSAIVMGTASQ 60
           MEMDQSKAKSEGEVPLGSKIRYPFGGGGAQRGL IVDLVLRVVALM TLCSAIVMGTA Q
Sbjct: 1   MEMDQSKAKSEGEVPLGSKIRYPFGGGGAQRGLTIVDLVLRVVALMATLCSAIVMGTAHQ 60

Query: 61  TLPFSTQSTQFKAVYKDLPMFMFFVLANSVACGYLFLSLPLSIFQMVKVASVTPRLTLLI 120
           TLPFSTQSTQFKAVYKDLPMFMFFVL NSVACGYLFLSLPLSIFQMVKVASVTPRLTLLI
Sbjct: 61  TLPFSTQSTQFKAVYKDLPMFMFFVLVNSVACGYLFLSLPLSIFQMVKVASVTPRLTLLI 120

Query: 121 FDTMAMALVTAGASVAASVVYLAYQGNTVVNWASFCSQFNSFCRRSSQSLIGSFGAVLVL 180
           FDTMAMAL TAGASVAASVVYLAYQGNTVVNWASFCSQF+SFCRRSSQSLIGSFGAVLVL
Sbjct: 121 FDTMAMALETAGASVAASVVYLAYQGNTVVNWASFCSQFDSFCRRSSQSLIGSFGAVLVL 180

Query: 181 VLMITLSAIAMSRRITNTQ 200
           VL+ITLSAIAMSRRITNTQ
Sbjct: 181 VLLITLSAIAMSRRITNTQ 199

BLAST of Carg17284 vs. ExPASy TrEMBL
Match: A0A5A7SX44 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00250 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 4.0e-60
Identity = 134/192 (69.79%), Postives = 155/192 (80.73%), Query Frame = 0

Query: 3   MDQSKAKSEGEVPLGSKIRYPFGGGGAQRGLPIVDLVLRVVALMGTLCSAIVMGTASQTL 62
           M ++K +S     LGSK + P  G GAQRGL IVDLV+RV+A M TL SAIVMGTA+QTL
Sbjct: 1   MGKTKTESGEIQNLGSKFKNPI-GEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTL 60

Query: 63  PFSTQSTQFKAVYKDLPMFMFFVLANSVACGYLFLSLPLSIFQMVKVASVTPRLTLLIFD 122
           PFSTQS+QFKA YKDLPMFMFFV+AN++ CGYLFLSLPLSIF +++VASVTPRL LLIFD
Sbjct: 61  PFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFD 120

Query: 123 TMAMALVTAGASVAASVVYLAYQGNTVVNWASFCSQFNSFCRRSSQSLIGSFGAVLVLVL 182
           TMAM L TAGAS AAS VYLAY+GN   NW SFC+QF+SFCRR S SLIGSF AV   +L
Sbjct: 121 TMAMVLATAGASTAASAVYLAYRGNVAANWVSFCTQFDSFCRRISGSLIGSFCAVFAFML 180

Query: 183 MITLSAIAMSRR 195
           +I +S +AM RR
Sbjct: 181 LIIISVVAMVRR 191

BLAST of Carg17284 vs. ExPASy TrEMBL
Match: A0A1S3BFR8 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103489141 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 4.0e-60
Identity = 134/192 (69.79%), Postives = 155/192 (80.73%), Query Frame = 0

Query: 3   MDQSKAKSEGEVPLGSKIRYPFGGGGAQRGLPIVDLVLRVVALMGTLCSAIVMGTASQTL 62
           M ++K +S     LGSK + P  G GAQRGL IVDLV+RV+A M TL SAIVMGTA+QTL
Sbjct: 1   MGKTKTESGEIQNLGSKFKNPI-GEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTL 60

Query: 63  PFSTQSTQFKAVYKDLPMFMFFVLANSVACGYLFLSLPLSIFQMVKVASVTPRLTLLIFD 122
           PFSTQS+QFKA YKDLPMFMFFV+AN++ CGYLFLSLPLSIF +++VASVTPRL LLIFD
Sbjct: 61  PFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFD 120

Query: 123 TMAMALVTAGASVAASVVYLAYQGNTVVNWASFCSQFNSFCRRSSQSLIGSFGAVLVLVL 182
           TMAM L TAGAS AAS VYLAY+GN   NW SFC+QF+SFCRR S SLIGSF AV   +L
Sbjct: 121 TMAMVLATAGASTAASAVYLAYRGNVAANWVSFCTQFDSFCRRISGSLIGSFCAVFAFML 180

Query: 183 MITLSAIAMSRR 195
           +I +S +AM RR
Sbjct: 181 LIIISVVAMVRR 191

BLAST of Carg17284 vs. ExPASy TrEMBL
Match: A0A0A0KQP6 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G606300 PE=3 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 6.3e-58
Identity = 133/192 (69.27%), Postives = 152/192 (79.17%), Query Frame = 0

Query: 3   MDQSKAKSEGEVPLGSKIRYPFGGGGAQRGLPIVDLVLRVVALMGTLCSAIVMGTASQTL 62
           M ++K +S     LGSK   P  G GAQRGL IVDLV+RV+A M TL SAIVMGTA+QTL
Sbjct: 1   MGKTKTESGETQILGSKFENPI-GEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTL 60

Query: 63  PFSTQSTQFKAVYKDLPMFMFFVLANSVACGYLFLSLPLSIFQMVKVASVTPRLTLLIFD 122
           PFSTQ++QFKA YKDLP  MFFVLANS+ CGYLFLSLPLSIF +++VASVTPRL LLIFD
Sbjct: 61  PFSTQTSQFKANYKDLP--MFFVLANSIVCGYLFLSLPLSIFHIMEVASVTPRLILLIFD 120

Query: 123 TMAMALVTAGASVAASVVYLAYQGNTVVNWASFCSQFNSFCRRSSQSLIGSFGAVLVLVL 182
            MAM L TAGAS AAS VYLAY+GN   NW SFC+QF+SFCRR S SLIGSFGAV   +L
Sbjct: 121 MMAMVLATAGASTAASAVYLAYRGNVAANWVSFCTQFDSFCRRISGSLIGSFGAVFAFML 180

Query: 183 MITLSAIAMSRR 195
           +I +S +AM RR
Sbjct: 181 LIIISIVAMVRR 189

BLAST of Carg17284 vs. TAIR 10
Match: AT5G06200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 161.8 bits (408), Expect = 5.9e-40
Identity = 85/189 (44.97%), Postives = 125/189 (66.14%), Query Frame = 0

Query: 5   QSKAKSEGEVPLGSKIRYPFGGGGAQRGLPIVDLVLRVVALMGTLCSAIVMGTASQTLPF 64
           +S +  +G+ PL    R   G GG +RGL I D +LR+ A++  L +A  MGT+ +TLPF
Sbjct: 13  ESSSVIKGKAPLLGLARDHTGSGGYKRGLSIFDFLLRLAAIVAALAAAATMGTSDETLPF 72

Query: 65  STQSTQFKAVYKDLPMFMFFVLANSVACGYLFLSLPLSIFQMVKVASVTPRLTLLIFDTM 124
            TQ  QF+A Y DLP F FFV+A ++  GYL LSLP S+  +V+  +V PRL LL+ DT 
Sbjct: 73  FTQFLQFEASYDDLPTFQFFVVAIAIVAGYLVLSLPFSVVTIVRPLAVAPRLLLLVLDTA 132

Query: 125 AMALVTAGASVAASVVYLAYQGNTVVNWASFCSQFNSFCRRSSQSLIGSFGAVLVLVLMI 184
           A+AL TA AS AA++VYLA+ GNT  NW   C QF  FC+++S +++ +F +V  L +++
Sbjct: 133 ALALDTAAASAAAAIVYLAHNGNTNTNWLPICQQFGDFCQKTSGAVVSAFASVTFLAILV 192

Query: 185 TLSAIAMSR 194
            +S +++ R
Sbjct: 193 VISGVSLKR 201

BLAST of Carg17284 vs. TAIR 10
Match: AT5G15290.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 156.8 bits (395), Expect = 1.9e-38
Identity = 87/168 (51.79%), Postives = 117/168 (69.64%), Query Frame = 0

Query: 27  GGAQRGLPIVDLVLRVVALMGTLCSAIVMGTASQTLPFSTQSTQFKAVYKDLPMFMFFVL 86
           G   R + I++ +LR+VA   T+ SAI+MGT  +TLPF TQ  +F+A Y DLP   FFV+
Sbjct: 19  GLMSRRIAILEFILRIVAFFNTIGSAILMGTTHETLPFFTQFIRFQAEYNDLPALTFFVV 78

Query: 87  ANSVACGYLFLSLPLSIFQMVKVASVTPRLTLLIFDTMAMALVTAGASVAASVVYLAYQG 146
           AN+V  GYL LSL L+   +VK  +   R+ L+I D   + L+T+GAS AA++VYLA+ G
Sbjct: 79  ANAVVSGYLILSLTLAFVHIVKRKTQNTRILLIILDVAMLGLLTSGASSAAAIVYLAHNG 138

Query: 147 NTVVNWASFCSQFNSFCRRSSQSLIGSFGAVLVLVLMITLSAIAMSRR 195
           N   NW + C QFNSFC R S SLIGSF A+++L+L+I LSAIA+SRR
Sbjct: 139 NNKTNWFAICQQFNSFCERISGSLIGSFIAIVLLILLILLSAIALSRR 186

BLAST of Carg17284 vs. TAIR 10
Match: AT3G11550.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 147.5 bits (371), Expect = 1.2e-35
Identity = 81/191 (42.41%), Postives = 121/191 (63.35%), Query Frame = 0

Query: 5   QSKAKSEGEVPLGSKIR--YPFGGGGAQRGLPIVDLVLRVVALMGTLCSAIVMGTASQTL 64
           +S +  +G+ PL    R     G GG  RGL I D +LR+ A++  L +A  MGT+ +TL
Sbjct: 13  ESSSAMKGKAPLIGVARDHTTSGSGGYNRGLAIFDFLLRLAAIVAALAAAATMGTSDETL 72

Query: 65  PFSTQSTQFKAVYKDLPMFMFFVLANSVACGYLFLSLPLSIFQMVKVASVTPRLTLLIFD 124
           PF TQ  QF+A Y DLP F FFV+A ++  GYL LSLP+S+  +++  +  PRL LL+ D
Sbjct: 73  PFFTQFLQFEASYDDLPTFQFFVIAMALVGGYLVLSLPISVVTILRPLATAPRLLLLVLD 132

Query: 125 TMAMALVTAGASVAASVVYLAYQGNTVVNWASFCSQFNSFCRRSSQSLIGSFGAVLVLVL 184
           T  +AL TA AS AA++ YLA+ GN   NW   C QF  FC++SS +++ +F +V+   +
Sbjct: 133 TGVLALNTAAASSAAAISYLAHSGNQNTNWLPICQQFGDFCQKSSGAVVSAFVSVVFFTI 192

Query: 185 MITLSAIAMSR 194
           ++ +S +A+ R
Sbjct: 193 LVVISGVALKR 203

BLAST of Carg17284 vs. TAIR 10
Match: AT1G14160.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 145.2 bits (365), Expect = 5.7e-35
Identity = 78/163 (47.85%), Postives = 114/163 (69.94%), Query Frame = 0

Query: 31  RGLPIVDLVLRVVALMGTLCSAIVMGTASQTLPFSTQSTQFKAVYKDLPMFMFFVLANSV 90
           +G+ ++  VLR+ A+ GT+ SA+ MGT  +++   +Q    K  Y DLP  MFFV+AN++
Sbjct: 46  KGISVLGFVLRLFAVFGTIGSALAMGTTHESVVSLSQLVLLKVKYSDLPTLMFFVVANAI 105

Query: 91  ACGYLFLSLPLSIFQMVKVASVTPRLTLLIFDTMAMALVTAGASVAASVVYLAYQGNTVV 150
           + GYL LSLP+SIF +    + T R+ LL+ DT+ +ALV++GAS A + VYLA++GNT  
Sbjct: 106 SGGYLVLSLPVSIFHIFSTQAKTSRIILLVVDTVMLALVSSGASAATATVYLAHEGNTTA 165

Query: 151 NWASFCSQFNSFCRRSSQSLIGSFGAVLVLVLMITLSAIAMSR 194
           NW   C QF+ FC R S SLIGSF AV++L+L++  SAI++SR
Sbjct: 166 NWPPICQQFDGFCERISGSLIGSFCAVILLMLIVINSAISLSR 208

BLAST of Carg17284 vs. TAIR 10
Match: AT2G36100.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 144.1 bits (362), Expect = 1.3e-34
Identity = 85/186 (45.70%), Postives = 118/186 (63.44%), Query Frame = 0

Query: 8   AKSEGEVPLGSKIRYPFGGGGAQRGLPIVDLVLRVVALMGTLCSAIVMGTASQTLPFSTQ 67
           AK +G V + S+       GGA+RGL I D +LR+ A+  T+ +A VM TA +TLPF TQ
Sbjct: 27  AKKKGFVAVASR-------GGAKRGLAIFDFLLRLAAIAVTIGAASVMYTAEETLPFFTQ 86

Query: 68  STQFKAVYKDLPMFMFFVLANSVACGYLFLSLPLSIFQMVKVASVTPRLTLLIFDTMAMA 127
             QF+A Y DLP F +FV+A +V   YL LSLP SI  +V+  +V PRL LLI DT+ + 
Sbjct: 87  FLQFQAGYDDLPAFQYFVIAVAVVASYLVLSLPFSIVSIVRPHAVAPRLILLICDTLVVT 146

Query: 128 LVTAGASVAASVVYLAYQGNTVVNWASFCSQFNSFCRRSSQSLIGSFGAVLVLVLMITLS 187
           L T+ A+ AAS+ YLA+ GN   NW   C QF  FC+  S +++    A+L  +++I +S
Sbjct: 147 LNTSAAAAAASITYLAHNGNQSTNWLPICQQFGDFCQNVSTAVVADSIAILFFIVLIIIS 205

Query: 188 AIAMSR 194
           AIA+ R
Sbjct: 207 AIALKR 205

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7013128.11.3e-100100.00Casparian strip membrane protein 2, partial [Cucurbita argyrosperma subsp. argyr... [more]
KAG6574068.11.1e-9999.01Casparian strip membrane protein 2, partial [Cucurbita argyrosperma subsp. soror... [more]
XP_023542035.11.9e-9696.06casparian strip membrane protein 3-like [Cucurbita pepo subsp. pepo][more]
XP_022945632.19.3e-9695.57casparian strip membrane protein 3-like [Cucurbita moschata][more]
XP_022968095.11.9e-9396.48casparian strip membrane protein 3-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
C5Z7E39.2e-4655.81Casparian strip membrane protein 3 OS=Sorghum bicolor OX=4558 GN=Sb10g008220 PE=... [more]
B9T4E69.2e-4659.52Casparian strip membrane protein 5 OS=Ricinus communis OX=3988 GN=RCOM_0299440 P... [more]
P0DI337.8e-4556.89Casparian strip membrane protein 1 OS=Panicum virgatum OX=38727 PE=2 SV=1[more]
A7PMY71.7e-4451.10Casparian strip membrane protein 3 OS=Vitis vinifera OX=29760 GN=VIT_14s0108g010... [more]
A2YAZ11.9e-4354.35Casparian strip membrane protein 3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI... [more]
Match NameE-valueIdentityDescription
A0A6J1G1G84.5e-9695.57CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111449815 PE=3 SV=1[more]
A0A6J1HW809.4e-9496.48CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111467431 PE=3 SV=1[more]
A0A5A7SX444.0e-6069.79CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G0... [more]
A0A1S3BFR84.0e-6069.79CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103489141 PE=3 SV=1[more]
A0A0A0KQP66.3e-5869.27CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G606300 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT5G06200.15.9e-4044.97Uncharacterised protein family (UPF0497) [more]
AT5G15290.11.9e-3851.79Uncharacterised protein family (UPF0497) [more]
AT3G11550.11.2e-3542.41Uncharacterised protein family (UPF0497) [more]
AT1G14160.15.7e-3547.85Uncharacterised protein family (UPF0497) [more]
AT2G36100.11.3e-3445.70Uncharacterised protein family (UPF0497) [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006459Casparian strip membrane proteinTIGRFAMTIGR01569TIGR01569coord: 38..190
e-value: 1.7E-40
score: 136.4
IPR006702Casparian strip membrane protein domainPFAMPF04535DUF588coord: 31..179
e-value: 2.8E-40
score: 137.5
NoneNo IPR availablePANTHERPTHR11615:SF318CASPARIAN STRIP MEMBRANE PROTEIN 4coord: 28..193
NoneNo IPR availablePANTHERPTHR11615NITRATE, FORMATE, IRON DEHYDROGENASEcoord: 28..193

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg17284-RACarg17284-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane