Carg16874 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16874
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	RING-H2 finger protein ATL16-like
Location	Carg_Chr19: 561693 .. 565717 (-)
RNA-Seq Expression	Carg16874
Synteny	Carg16874

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTCCGTCCTCTTTCATCTCAACTTACTGTTTCTGAAGTTGTTCCAATGAGATCGGCGACATTTCTCCGTTGCCCCTACTTCTTGCTTCCTGTTCATGGCTTCAGCTCTTCCACATCCAAGAACTCCATTAAATTTAAGCCCACTTTCTTCAATTCGCGAGCTAAACCGGCCCGATTGGTTGTGTTTTGTTGTCGGGATTCAGAGAAATCTGTTCGGAATGAGCAGTCTGTGGGGATTGACGATTCGAATCGGGCTTTGATGGAGAAGAACATAGAGCGAATGCAATGGAATGAGGAAGTGGGTAGCCCTAGTTTTGGATTTCAGCCTCTCGCCAAATTGAGCTTGAACGACAAGGCTTCTCTTCTCTTGACATTCATTGCCCTAACGGTAAATTGGATTTTTCATATTTTTTTGTCTCCTAAATCCTCTCGATTTGCTGTGTGTTCTGTGAATTTCTGGTAGTTATTGGCTGTGTCCTGAAGAATGCTGCTGATTCTGTAACCGATAATGTTTCTTTGAGATATAAGAATTAATGGTGAACTTGTGCCTTCTTTTCGTTTCTTTGTTATTCCTAGTTGATTATGATTAGTTCCTAACAAATAGAATAGTTTTTTTGGTTTTATCAATCCTTGAAAGTTTCTCCTTACTACTTTTGACTATTATGAATGTTCATTAGCAGATCAAGTTCTGATTATAGAGATGTTGAGCTAAGAAGACTAAAAGAGATTGTTGATGTTTGTAAATTGTCATGAAGAATAAGTTGATGAATCTTTTGGATCCATAAACATTTTTGGTGCATTCTTCTTTCCTATCCATTGGAATTTATTTGGTTCATCTCCCTCTTGTGATACATGAATCATCTTGATTCATGTTTGGCATTAATGCTTCTATGCCTTTATATAGGGTAGTCTAGGATGGTTGAGAGGCATTGAGGTTGAGTGTCATTTTGTATTTGTTGAGTGACATTTGGGAGGAACTTTATTTAGTGAGACTTTGCAGTGTAAGAGTGTGTTACACTTTGATTATTGAGATGGTTGCTGCCCGTGGATGTAGGGAAATTTTTTCTCTCCTAACCACGTAAATCTTTGTGTCTCTTTGTTTAATTTCTGTTTGTGGGTGAGTGATGTTATCTTCTTTAATATAATACAATTATGTAATAGTAAACAATACAACAAACAAATGAAATCGTGTTACCTTTGCTGATCATTTCTGGCTGGGTTTTCACCTTACATATGTATGGTTTCAGATGGAGAGGACAAATCCTTCCCAATTGGAAGGTGATTTTGTAAGTAGCTATCGTTAGGAAGGAGAGCTCTCCCTCCCCCAGTCCGGTTGTCTTTATGTAACAGTCCAAGCCCATTGCTAGTAGATATTGTCCTTTTTGGGCTCTTCCTCTCGGGCTTCCCTCGAAGGTTTTTAAAATGTGTCTATTATGGAGAGGTTTTCATACCCTTACAAAGAATGTTTCGTTCCCCTCTCCAACCGATGTGGGATCTCACACATTCTCCCTTTGGGTAATGCATTTTTCATGTTTCCTATAATTTTAAGAGAGAGGGAGAGAGGGAGAGAGAGAGAGAGATGGAGAGGATAATCCTTAGATGTCATAGGTGTATTTTGTTCAAGCTCGAGAAGCTCGGTGTGGTTTTAGGTTTCGTAGATGAACGGATATGTTATCTTTTATTGTGTTGAGCTCTGGATTGAAAATCACTTGAGGATTTTTGTTCCCATAACAACACCTCTCCTTATAATGGAGCTAGTTATTTGGTACTGTTTTTCTATTCAGTTGATGTTTCTGAATTGTGCCCTTGGTAGGAGCTGACCTGTGCTTACTAATGGGAGCATGTGATGAATACCCACTTTCACATACTTCTAACGAGTTATTTGGTCATTGTGTATTTGTACAAACATTGATTTGTGCTTATTGGTGCAGGTTTCTGTGGCATTTACAAGCCTTGTCATTGCGGCTGTGCCAACGCTTAATGTAAGTTCATTGATAACACGCCACTCCACAATGTTATGAATTATGAATCTGAGAGTAGTAATTTTCTACAAATTTTACGTAGGCGATGCGCAGAGCTGCCATTTCACTTTCAAAACTAGCTGACACAGCTCGGGAAGAACTTCCTGGTACGATGGCTGCCATTAGACTTTCTGGCATGGAGATCAGTGATCTGACTCTTGAACTTAGCGATCTAAGGTGAGTACAGTTCCTTATCTGGGTCCATCTCTTCTTGCCCATAGTTTTATGGTTAAGAACGAATCGTCTTCTTTAATGTATGTCTTTAGTGTAGACAATTTTTAAGGGTATTGAGGAAACCTGGGATTAAGTTTTGGTTGTAGCGCACTTTAATGCTTCCGTTTGTATCCACATCTTGTAAGAAACTTTGTGTAATAGTCCAAGTCCACCGCTAGCAGATTTTGTCCTCTTTGGCCTTTTTCTTTTAGACTTCTCCTCAAGGTTTTAAAACGCGCTTGCTAGGGAGACGTTTCCACACCCTTACAAAGAATGTTTCACTCCTCCCCAACCGATATGGGATCTCACAATCCACCCCCCGAATGTCCTCATTGGCACACCGTCTAGTCCACTCCCTTATAGCCTAAGCCCACCGTTAGCCGATATTGTCCTCTTTAGGCTTTCCTTTCAGACTTCCTGTCAAGGTTTTAAAACGCGTCTTCTAGGGAAAAATTTCCACACCCTTGTAAAGAATGCTTTGTTCTTCTCTCCAACCGATGTGGGATCTCACACTTCGTCTTTTGATCACAGCGGTCAGAGTGATATATCTTCGTTTTCTCTTTTGATTGTTCTCTCATTTTCTTAATGAAAGCAGCTTCTAAGCAGGTCTAAAGATTTACATCATGGATATGACATATATTGCTTGTTTCTTGTATCATTCATCTCCTCTTCTCTGTGTGTACCATCATTCCTTCCAACATTTCTGAGCAATCTGCCTGGATTTGGTTGTGATCACAGCCAGGAGATAGCAGATGGGGTAAACAAATCAGCTCAGGCTGTCCAAGCAGCAGAAGCTGGAATTCGTCAGATCAGTGCAGTTGCCCACCAAAAAACTATGTGTATGTTCGACTACAAGTTGCCTAAGATAACTTATACGACACGTGCTTATGACTAATCACCAGAGTTTAACAGCGTATACTATGTTGTCTGCATGATACAGCAATGATTCAAGAGAGAGCAGACCTGCCCGTTATTTCTTTGCAGCCTGTTGTTGCTGGAGCTGCAAAGAAGACTTCTCGTGCTGTAGGCAAAGCTACACGAACCATCATGAAAATGATCTCCGGAGGGGAAAGTATGGAGAATGATGATGATAATAGTCTAGATAGACTGGAAGTTTGAGTTTGCTGGTTCCTTGCTTGAAATCGATTTAATGGTGTAAATATCACACAAGCGTTTATCCTGTACTTGTCGATACGAAGACCCGAAATGCATCTTCAGACACTCAAAAGTTGGGAAATCTTCAAATAATGACATTAATCAGCTCTATTTTCACCCCATCCCACTTGATTCCAGGAACTCTAAAAGCTGTGTAATTTGTTCTGATCTGTCGGAGACTGCCATTTTATCAAGTGCACATCGAGTACTGATATACGGCCGAGGTGTTGAAAGGTTTCTTCGGACAAAACGAAGATCATTCGAATTGTATACTGCTCGAGCCATTGAAAAGAAACGTTCGGAAAAGAAATGACTAAGATACAATGCACTTTAATGCTTCCCTTTGCATCCCCAAAATGTAGCATTGAATGTTCAAGAAATTTGCAGGAAGAGCCACCTTGAATGTTCACGAGGTAGACGATACCAGCTTGTTGAGGTCGTCACAATGTAGCTGATAGTTTTTCACCGTTGATGTATGAATGGACATATCTTAAATTTATAGCTCATGGTTATTAGGGGACATACACATTTTTTTGATCCACATCTAACCGTTATTACAAGACAATCAACAAGTGTCCGAGTGTGATGGGCACAGCTTTCTTGCTATTGGGTTACTACATTTTGATCGGTAAATG

mRNA sequence

TCCTCCGTCCTCTTTCATCTCAACTTACTGTTTCTGAAGTTGTTCCAATGAGATCGGCGACATTTCTCCGTTGCCCCTACTTCTTGCTTCCTGTTCATGGCTTCAGCTCTTCCACATCCAAGAACTCCATTAAATTTAAGCCCACTTTCTTCAATTCGCGAGCTAAACCGGCCCGATTGGTTGTGTTTTGTTGTCGGGATTCAGAGAAATCTGTTCGGAATGAGCAGTCTGTGGGGATTGACGATTCGAATCGGGCTTTGATGGAGAAGAACATAGAGCGAATGCAATGGAATGAGGAAGTGGGTAGCCCTAGTTTTGGATTTCAGCCTCTCGCCAAATTGAGCTTGAACGACAAGGCTTCTCTTCTCTTGACATTCATTGCCCTAACGGTTTCTGTGGCATTTACAAGCCTTGTCATTGCGGCTGTGCCAACGCTTAATGCGATGCGCAGAGCTGCCATTTCACTTTCAAAACTAGCTGACACAGCTCGGGAAGAACTTCCTGGTACGATGGCTGCCATTAGACTTTCTGGCATGGAGATCAGTGATCTGACTCTTGAACTTAGCGATCTAAGCCAGGAGATAGCAGATGGGGTAAACAAATCAGCTCAGGCTGTCCAAGCAGCAGAAGCTGGAATTCGTCAGATCAGTGCAGTTGCCCACCAAAAAACTATGTCAATGATTCAAGAGAGAGCAGACCTGCCCGTTATTTCTTTGCAGCCTGTTGTTGCTGGAGCTGCAAAGAAGACTTCTCGTGCTGTAGGCAAAGCTACACGAACCATCATGAAAATGATCTCCGGAGGGGAAAGTATGGAGAATGATGATGATAATAGTCTAGATAGACTGGAAGTTTGAGTTTGCTGGTTCCTTGCTTGAAATCGATTTAATGGTGTAAATATCACACAAGCGTTTATCCTGTACTTGTCGATACGAAGACCCGAAATGCATCTTCAGACACTCAAAAGTTGGGAAATCTTCAAATAATGACATTAATCAGCTCTATTTTCACCCCATCCCACTTGATTCCAGGAACTCTAAAAGCTGTGTAATTTGTTCTGATCTGTCGGAGACTGCCATTTTATCAAGTGCACATCGAGTACTGATATACGGCCGAGGTGTTGAAAGGTTTCTTCGGACAAAACGAAGATCATTCGAATTGTATACTGCTCGAGCCATTGAAAAGAAACGTTCGGAAAAGAAATGACTAAGATACAATGCACTTTAATGCTTCCCTTTGCATCCCCAAAATGTAGCATTGAATGTTCAAGAAATTTGCAGGAAGAGCCACCTTGAATGTTCACGAGGTAGACGATACCAGCTTGTTGAGGTCGTCACAATGTAGCTGATAGTTTTTCACCGTTGATGTATGAATGGACATATCTTAAATTTATAGCTCATGGTTATTAGGGGACATACACATTTTTTTGATCCACATCTAACCGTTATTACAAGACAATCAACAAGTGTCCGAGTGTGATGGGCACAGCTTTCTTGCTATTGGGTTACTACATTTTGATCGGTAAATG

Coding sequence (CDS)

ATGAGATCGGCGACATTTCTCCGTTGCCCCTACTTCTTGCTTCCTGTTCATGGCTTCAGCTCTTCCACATCCAAGAACTCCATTAAATTTAAGCCCACTTTCTTCAATTCGCGAGCTAAACCGGCCCGATTGGTTGTGTTTTGTTGTCGGGATTCAGAGAAATCTGTTCGGAATGAGCAGTCTGTGGGGATTGACGATTCGAATCGGGCTTTGATGGAGAAGAACATAGAGCGAATGCAATGGAATGAGGAAGTGGGTAGCCCTAGTTTTGGATTTCAGCCTCTCGCCAAATTGAGCTTGAACGACAAGGCTTCTCTTCTCTTGACATTCATTGCCCTAACGGTTTCTGTGGCATTTACAAGCCTTGTCATTGCGGCTGTGCCAACGCTTAATGCGATGCGCAGAGCTGCCATTTCACTTTCAAAACTAGCTGACACAGCTCGGGAAGAACTTCCTGGTACGATGGCTGCCATTAGACTTTCTGGCATGGAGATCAGTGATCTGACTCTTGAACTTAGCGATCTAAGCCAGGAGATAGCAGATGGGGTAAACAAATCAGCTCAGGCTGTCCAAGCAGCAGAAGCTGGAATTCGTCAGATCAGTGCAGTTGCCCACCAAAAAACTATGTCAATGATTCAAGAGAGAGCAGACCTGCCCGTTATTTCTTTGCAGCCTGTTGTTGCTGGAGCTGCAAAGAAGACTTCTCGTGCTGTAGGCAAAGCTACACGAACCATCATGAAAATGATCTCCGGAGGGGAAAGTATGGAGAATGATGATGATAATAGTCTAGATAGACTGGAAGTTTGA

Protein sequence

MRSATFLRCPYFLLPVHGFSSSTSKNSIKFKPTFFNSRAKPARLVVFCCRDSEKSVRNEQSVGIDDSNRALMEKNIERMQWNEEVGSPSFGFQPLAKLSLNDKASLLLTFIALTVSVAFTSLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSDLSQEIADGVNKSAQAVQAAEAGIRQISAVAHQKTMSMIQERADLPVISLQPVVAGAAKKTSRAVGKATRTIMKMISGGESMENDDDNSLDRLEV

Homology

[Close]

BLAST of Carg16874 vs. NCBI nr
Match: KAG6571517.1 (hypothetical protein SDJN03_28245, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011264.1 hypothetical protein SDJN02_26168 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 494.2 bits (1271), Expect = 7.1e-136
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0


Query: 1   MRSATFLRCPYFLLPVHGFSSSTSKNSIKFKPTFFNSRAKPARLVVFCCRDSEKSVRNEQ 60
           MRSATFLRCPYFLLPVHGFSSSTSKNSIKFKPTFFNSRAKPARLVVFCCRDSEKSVRNEQ
Sbjct: 1   MRSATFLRCPYFLLPVHGFSSSTSKNSIKFKPTFFNSRAKPARLVVFCCRDSEKSVRNEQ 60

Query: 61  SVGIDDSNRALMEKNIERMQWNEEVGSPSFGFQPLAKLSLNDKASLLLTFIALTVSVAFT 120
           SVGIDDSNRALMEKNIERMQWNEEVGSPSFGFQPLAKLSLNDKASLLLTFIALTVSVAFT
Sbjct: 61  SVGIDDSNRALMEKNIERMQWNEEVGSPSFGFQPLAKLSLNDKASLLLTFIALTVSVAFT 120

Query: 121 SLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSDLSQEIA 180
           SLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSDLSQEIA
Sbjct: 121 SLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSDLSQEIA 180

Query: 181 DGVNKSAQAVQAAEAGIRQISAVAHQKTMSMIQERADLPVISLQPVVAGAAKKTSRAVGK 240
           DGVNKSAQAVQAAEAGIRQISAVAHQKTMSMIQERADLPVISLQPVVAGAAKKTSRAVGK
Sbjct: 181 DGVNKSAQAVQAAEAGIRQISAVAHQKTMSMIQERADLPVISLQPVVAGAAKKTSRAVGK 240

Query: 241 ATRTIMKMISGGESMENDDDNSLDRLEV 269
           ATRTIMKMISGGESMENDDDNSLDRLEV
Sbjct: 241 ATRTIMKMISGGESMENDDDNSLDRLEV 268

[Close]

BLAST of Carg16874 vs. NCBI nr
Match: XP_023553629.1 (uncharacterized protein LOC111811121 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 484.2 bits (1245), Expect = 7.4e-133
Identity = 264/268 (98.51%), Postives = 264/268 (98.51%), Query Frame = 0


Query: 1   MRSATFLRCPYFLLPVHGFSSSTSKNSIKFKPTFFNSRAKPARLVVFCCRDSEKSVRNEQ 60
           MRSATFLRCPYFLLPVHGFSSSTSKNSIKFKPTFFNSRAKPARLVVFCCRDSEKSVRNEQ
Sbjct: 1   MRSATFLRCPYFLLPVHGFSSSTSKNSIKFKPTFFNSRAKPARLVVFCCRDSEKSVRNEQ 60

Query: 61  SVGIDDSNRALMEKNIERMQWNEEVGSPSFGFQPLAKLSLNDKASLLLTFIALTVSVAFT 120
           SVGIDDSNRALMEKNIERMQWN EVGSPS  FQPLAKLSLNDKASLLLTFIALT SVAFT
Sbjct: 61  SVGIDDSNRALMEKNIERMQWNVEVGSPSVRFQPLAKLSLNDKASLLLTFIALTASVAFT 120

Query: 121 SLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSDLSQEIA 180
           SLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSDLSQEIA
Sbjct: 121 SLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSDLSQEIA 180

Query: 181 DGVNKSAQAVQAAEAGIRQISAVAHQKTMSMIQERADLPVISLQPVVAGAAKKTSRAVGK 240
           DGVNKSAQAVQAAEAGIRQISAVAHQKTMSMIQERADLPVISLQPVVAGAAKKTSRAVGK
Sbjct: 181 DGVNKSAQAVQAAEAGIRQISAVAHQKTMSMIQERADLPVISLQPVVAGAAKKTSRAVGK 240

Query: 241 ATRTIMKMISGGESMENDDDNSLDRLEV 269
           ATRTIMKMISGGESMENDDDNSLDRLEV
Sbjct: 241 ATRTIMKMISGGESMENDDDNSLDRLEV 268

[Close]

BLAST of Carg16874 vs. NCBI nr
Match: XP_022963991.1 (uncharacterized protein LOC111464126 [Cucurbita moschata])

HSP 1 Score: 483.0 bits (1242), Expect = 1.6e-132
Identity = 263/268 (98.13%), Postives = 264/268 (98.51%), Query Frame = 0


Query: 1   MRSATFLRCPYFLLPVHGFSSSTSKNSIKFKPTFFNSRAKPARLVVFCCRDSEKSVRNEQ 60
           MRSATFL CPYFLLPVHGFSSSTSKNSIKFKPTFFNSRAKPARLVVFCCRDSEKSVRNEQ
Sbjct: 1   MRSATFLCCPYFLLPVHGFSSSTSKNSIKFKPTFFNSRAKPARLVVFCCRDSEKSVRNEQ 60

Query: 61  SVGIDDSNRALMEKNIERMQWNEEVGSPSFGFQPLAKLSLNDKASLLLTFIALTVSVAFT 120
           SVGIDDSNRALMEKNIERMQWNEEVG PS GFQPLAKLSL+DKASLLLTFIALT SVAFT
Sbjct: 61  SVGIDDSNRALMEKNIERMQWNEEVGCPSVGFQPLAKLSLSDKASLLLTFIALTASVAFT 120

Query: 121 SLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSDLSQEIA 180
           SLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSDLSQEIA
Sbjct: 121 SLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSDLSQEIA 180

Query: 181 DGVNKSAQAVQAAEAGIRQISAVAHQKTMSMIQERADLPVISLQPVVAGAAKKTSRAVGK 240
           DGVNKSAQAVQAAEAGIRQISAVAHQKTMSMIQERADLPVISLQPVVAGAAKKTSRAVGK
Sbjct: 181 DGVNKSAQAVQAAEAGIRQISAVAHQKTMSMIQERADLPVISLQPVVAGAAKKTSRAVGK 240

Query: 241 ATRTIMKMISGGESMENDDDNSLDRLEV 269
           ATRTIMKMISGGESMENDDDNSLDRLEV
Sbjct: 241 ATRTIMKMISGGESMENDDDNSLDRLEV 268

[Close]

BLAST of Carg16874 vs. NCBI nr
Match: XP_022967389.1 (uncharacterized protein LOC111466934 [Cucurbita maxima])

HSP 1 Score: 452.6 bits (1163), Expect = 2.4e-123
Identity = 251/268 (93.66%), Postives = 254/268 (94.78%), Query Frame = 0


Query: 1   MRSATFLRCPYFLLPVHGFSSSTSKNSIKFKPTFFNSRAKPARLVVFCCRDSEKSVRNEQ 60
           MRSATFLRCPY LLPV GF SSTSKNSIKFKPTFFN RAK  RLVVFC RDSEKSVRNEQ
Sbjct: 1   MRSATFLRCPYSLLPVQGFISSTSKNSIKFKPTFFNLRAKSVRLVVFCHRDSEKSVRNEQ 60

Query: 61  SVGIDDSNRALMEKNIERMQWNEEVGSPSFGFQPLAKLSLNDKASLLLTFIALTVSVAFT 120
            VG+DDS+ ALMEKNIERMQWN EVGSPS GFQPLAKLSL+DKASLLLTFIAL  SVAFT
Sbjct: 61  FVGVDDSDGALMEKNIERMQWNVEVGSPSVGFQPLAKLSLSDKASLLLTFIALMASVAFT 120

Query: 121 SLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSDLSQEIA 180
           SLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSDLSQEIA
Sbjct: 121 SLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSDLSQEIA 180

Query: 181 DGVNKSAQAVQAAEAGIRQISAVAHQKTMSMIQERADLPVISLQPVVAGAAKKTSRAVGK 240
           DGVNKSAQAVQAAEAGIRQISAVAHQKTMSMIQERADLPVISLQPVVAGAAKKTSRAVGK
Sbjct: 181 DGVNKSAQAVQAAEAGIRQISAVAHQKTMSMIQERADLPVISLQPVVAGAAKKTSRAVGK 240

Query: 241 ATRTIMKMISGGESMENDDDNSLDRLEV 269
           ATRTIMKMISG ESMENDDDNSLDRLEV
Sbjct: 241 ATRTIMKMISGEESMENDDDNSLDRLEV 268

[Close]

BLAST of Carg16874 vs. NCBI nr
Match: XP_038889010.1 (uncharacterized protein LOC120078775 [Benincasa hispida])

HSP 1 Score: 423.7 bits (1088), Expect = 1.2e-114
Identity = 234/274 (85.40%), Postives = 249/274 (90.88%), Query Frame = 0


Query: 1   MRSATFLRCPYFLLPVHGFSSSTSKNSI------KFKPTFFNSRAKPARLVVFCCRDSEK 60
           MRSAT L  P+F LPVHGF+SSTSKN I      KFKPTFFN RAKP RLVVFC RDSEK
Sbjct: 1   MRSATLLHSPFFFLPVHGFTSSTSKNPILFVSHCKFKPTFFNLRAKPDRLVVFCYRDSEK 60

Query: 61  SVRNEQSVGIDDSNRALMEKNIERMQWNEEVGSPSFGFQPLAKLSLNDKASLLLTFIALT 120
           SVR+EQSVG++DSN ALME+N+ER QWN EVGSP  GF+ L +L+L+DKA LLLTFIALT
Sbjct: 61  SVRDEQSVGVEDSNGALMEENVERNQWNVEVGSPGVGFRSLPRLNLSDKAFLLLTFIALT 120

Query: 121 VSVAFTSLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSD 180
            SVAFTSLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSD
Sbjct: 121 TSVAFTSLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSD 180

Query: 181 LSQEIADGVNKSAQAVQAAEAGIRQISAVAHQKTMSMIQERADLPVISLQPVVAGAAKKT 240
           LSQEIADGVNKSAQAVQAAEAGIRQI A+AHQ+TMSMIQERA LP+ISLQPVVAGAAKKT
Sbjct: 181 LSQEIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIQERASLPIISLQPVVAGAAKKT 240

Query: 241 SRAVGKATRTIMKMISGGESMENDDDNSLDRLEV 269
           SRAVGKATRTIMKMISGGE+MENDDDNSLDRLEV
Sbjct: 241 SRAVGKATRTIMKMISGGENMENDDDNSLDRLEV 274

[Close]

BLAST of Carg16874 vs. ExPASy TrEMBL
Match: A0A6J1HHL4 (uncharacterized protein LOC111464126 OS=Cucurbita moschata OX=3662 GN=LOC111464126 PE=4 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 7.9e-133
Identity = 263/268 (98.13%), Postives = 264/268 (98.51%), Query Frame = 0


Query: 1   MRSATFLRCPYFLLPVHGFSSSTSKNSIKFKPTFFNSRAKPARLVVFCCRDSEKSVRNEQ 60
           MRSATFL CPYFLLPVHGFSSSTSKNSIKFKPTFFNSRAKPARLVVFCCRDSEKSVRNEQ
Sbjct: 1   MRSATFLCCPYFLLPVHGFSSSTSKNSIKFKPTFFNSRAKPARLVVFCCRDSEKSVRNEQ 60

Query: 61  SVGIDDSNRALMEKNIERMQWNEEVGSPSFGFQPLAKLSLNDKASLLLTFIALTVSVAFT 120
           SVGIDDSNRALMEKNIERMQWNEEVG PS GFQPLAKLSL+DKASLLLTFIALT SVAFT
Sbjct: 61  SVGIDDSNRALMEKNIERMQWNEEVGCPSVGFQPLAKLSLSDKASLLLTFIALTASVAFT 120

Query: 121 SLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSDLSQEIA 180
           SLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSDLSQEIA
Sbjct: 121 SLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSDLSQEIA 180

Query: 181 DGVNKSAQAVQAAEAGIRQISAVAHQKTMSMIQERADLPVISLQPVVAGAAKKTSRAVGK 240
           DGVNKSAQAVQAAEAGIRQISAVAHQKTMSMIQERADLPVISLQPVVAGAAKKTSRAVGK
Sbjct: 181 DGVNKSAQAVQAAEAGIRQISAVAHQKTMSMIQERADLPVISLQPVVAGAAKKTSRAVGK 240

Query: 241 ATRTIMKMISGGESMENDDDNSLDRLEV 269
           ATRTIMKMISGGESMENDDDNSLDRLEV
Sbjct: 241 ATRTIMKMISGGESMENDDDNSLDRLEV 268

[Close]

BLAST of Carg16874 vs. ExPASy TrEMBL
Match: A0A6J1HWJ9 (uncharacterized protein LOC111466934 OS=Cucurbita maxima OX=3661 GN=LOC111466934 PE=4 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 1.1e-123
Identity = 251/268 (93.66%), Postives = 254/268 (94.78%), Query Frame = 0


Query: 1   MRSATFLRCPYFLLPVHGFSSSTSKNSIKFKPTFFNSRAKPARLVVFCCRDSEKSVRNEQ 60
           MRSATFLRCPY LLPV GF SSTSKNSIKFKPTFFN RAK  RLVVFC RDSEKSVRNEQ
Sbjct: 1   MRSATFLRCPYSLLPVQGFISSTSKNSIKFKPTFFNLRAKSVRLVVFCHRDSEKSVRNEQ 60

Query: 61  SVGIDDSNRALMEKNIERMQWNEEVGSPSFGFQPLAKLSLNDKASLLLTFIALTVSVAFT 120
            VG+DDS+ ALMEKNIERMQWN EVGSPS GFQPLAKLSL+DKASLLLTFIAL  SVAFT
Sbjct: 61  FVGVDDSDGALMEKNIERMQWNVEVGSPSVGFQPLAKLSLSDKASLLLTFIALMASVAFT 120

Query: 121 SLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSDLSQEIA 180
           SLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSDLSQEIA
Sbjct: 121 SLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSDLSQEIA 180

Query: 181 DGVNKSAQAVQAAEAGIRQISAVAHQKTMSMIQERADLPVISLQPVVAGAAKKTSRAVGK 240
           DGVNKSAQAVQAAEAGIRQISAVAHQKTMSMIQERADLPVISLQPVVAGAAKKTSRAVGK
Sbjct: 181 DGVNKSAQAVQAAEAGIRQISAVAHQKTMSMIQERADLPVISLQPVVAGAAKKTSRAVGK 240

Query: 241 ATRTIMKMISGGESMENDDDNSLDRLEV 269
           ATRTIMKMISG ESMENDDDNSLDRLEV
Sbjct: 241 ATRTIMKMISGEESMENDDDNSLDRLEV 268

[Close]

BLAST of Carg16874 vs. ExPASy TrEMBL
Match: A0A5D3DAC3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G001000 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.6e-109
Identity = 225/274 (82.12%), Postives = 244/274 (89.05%), Query Frame = 0


Query: 1   MRSATFLRCPYFLLPVHGFSSSTSKNSI------KFKPTFFNSRAKPARLVVFCCRDSEK 60
           MR++TFL   YFL PV GF+ STSK SI      KFKP FFN RAKP RLVVFC  DSE+
Sbjct: 1   MRTSTFLHSAYFLFPVRGFTCSTSKKSILFVAPCKFKPAFFNLRAKPDRLVVFCYGDSER 60

Query: 61  SVRNEQSVGIDDSNRALMEKNIERMQWNEEVGSPSFGFQPLAKLSLNDKASLLLTFIALT 120
           SVR+EQS+G++DSN  L+E+N+ER +WN E+G+PS GFQ L KLSL+DKA LLLTFIALT
Sbjct: 61  SVRDEQSIGVEDSNVTLVEENVERNRWNVELGTPSVGFQLLPKLSLSDKAFLLLTFIALT 120

Query: 121 VSVAFTSLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSD 180
            SVAFTSLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSD
Sbjct: 121 TSVAFTSLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSD 180

Query: 181 LSQEIADGVNKSAQAVQAAEAGIRQISAVAHQKTMSMIQERADLPVISLQPVVAGAAKKT 240
           LSQEIADGVNKSAQAVQAAEAGIRQI A+AHQ+TMSMIQERA LP+ISLQPVVAGAAKKT
Sbjct: 181 LSQEIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIQERASLPIISLQPVVAGAAKKT 240

Query: 241 SRAVGKATRTIMKMISGGESMENDDDNSLDRLEV 269
           S AVGKATRTIMKMISGGES+ENDDDNSLDRLEV
Sbjct: 241 SHAVGKATRTIMKMISGGESVENDDDNSLDRLEV 274

[Close]

BLAST of Carg16874 vs. ExPASy TrEMBL
Match: A0A1S3BHG6 (uncharacterized protein LOC103489884 OS=Cucumis melo OX=3656 GN=LOC103489884 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.6e-109
Identity = 225/274 (82.12%), Postives = 244/274 (89.05%), Query Frame = 0


Query: 1   MRSATFLRCPYFLLPVHGFSSSTSKNSI------KFKPTFFNSRAKPARLVVFCCRDSEK 60
           MR++TFL   YFL PV GF+ STSK SI      KFKP FFN RAKP RLVVFC  DSE+
Sbjct: 1   MRTSTFLHSAYFLFPVRGFTCSTSKKSILFVAPCKFKPAFFNLRAKPDRLVVFCYGDSER 60

Query: 61  SVRNEQSVGIDDSNRALMEKNIERMQWNEEVGSPSFGFQPLAKLSLNDKASLLLTFIALT 120
           SVR+EQS+G++DSN  L+E+N+ER +WN E+G+PS GFQ L KLSL+DKA LLLTFIALT
Sbjct: 61  SVRDEQSIGVEDSNVTLVEENVERNRWNVELGTPSVGFQLLPKLSLSDKAFLLLTFIALT 120

Query: 121 VSVAFTSLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSD 180
            SVAFTSLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSD
Sbjct: 121 TSVAFTSLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLELSD 180

Query: 181 LSQEIADGVNKSAQAVQAAEAGIRQISAVAHQKTMSMIQERADLPVISLQPVVAGAAKKT 240
           LSQEIADGVNKSAQAVQAAEAGIRQI A+AHQ+TMSMIQERA LP+ISLQPVVAGAAKKT
Sbjct: 181 LSQEIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIQERASLPIISLQPVVAGAAKKT 240

Query: 241 SRAVGKATRTIMKMISGGESMENDDDNSLDRLEV 269
           S AVGKATRTIMKMISGGES+ENDDDNSLDRLEV
Sbjct: 241 SHAVGKATRTIMKMISGGESVENDDDNSLDRLEV 274

[Close]

BLAST of Carg16874 vs. ExPASy TrEMBL
Match: A0A6J1K868 (uncharacterized protein LOC111491526 OS=Cucurbita maxima OX=3661 GN=LOC111491526 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 3.7e-106
Identity = 222/276 (80.43%), Postives = 238/276 (86.23%), Query Frame = 0


Query: 1   MRSATFLR--CPYFLLPVHGFSSSTSKNS------IKFKPTFFNSRAKPARLVVFCCRDS 60
           MRSAT L+  CPY  LP+HGFS S +KNS       KF+P  FN RAKPAR +V C RDS
Sbjct: 1   MRSATSLKTHCPYVSLPLHGFSFSATKNSSVSVTPCKFEPFLFNLRAKPARFLVLCYRDS 60

Query: 61  EKSVRNEQSVGIDDSNRALMEKNIERMQWNEEVGSPSFGFQPLAKLSLNDKASLLLTFIA 120
           EKS   +QSVG++DSN AL  +N E+ QW+ EVGSPSFGF PLAK SL+DKA LL TFIA
Sbjct: 61  EKSALEQQSVGVEDSNGALTVENTEQNQWSVEVGSPSFGFWPLAKFSLSDKAFLLFTFIA 120

Query: 121 LTVSVAFTSLVIAAVPTLNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLEL 180
           LT+SVAFTSLVIAAVPT NAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLEL
Sbjct: 121 LTISVAFTSLVIAAVPTFNAMRRAAISLSKLADTAREELPGTMAAIRLSGMEISDLTLEL 180

Query: 181 SDLSQEIADGVNKSAQAVQAAEAGIRQISAVAHQKTMSMIQERADLPVISLQPVVAGAAK 240
           SDLSQEIADGVNKSAQAVQAAEAGIRQI A+AHQ+TMSMIQERA LP+ISLQPVV GAAK
Sbjct: 181 SDLSQEIADGVNKSAQAVQAAEAGIRQIGALAHQQTMSMIQERASLPIISLQPVVVGAAK 240

Query: 241 KTSRAVGKATRTIMKMISGGESMENDDDNSLDRLEV 269
           KTSRAVGKATRTIMKMISGGES ENDDDNSLDRLEV
Sbjct: 241 KTSRAVGKATRTIMKMISGGESTENDDDNSLDRLEV 276

[Close]

BLAST of Carg16874 vs. TAIR 10
Match: AT1G08530.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G09995.2); Has 140 Blast hits to 140 proteins in 53 species: Archae - 0; Bacteria - 63; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 214.2 bits (544), Expect = 1.3e-55
Identity = 122/176 (69.32%), Postives = 146/176 (82.95%), Query Frame = 0


Query: 84  EVGSP--SFGFQPLAKLSLNDKASLLLTFIALTVSVAFTSLVIAAVPTLNAMRRAAISLS 143
           +VGSP       PLAKLSL+D+A LLL FI  T SVAFTSLVI A+PTL AM RAA S +
Sbjct: 82  QVGSPISLHSINPLAKLSLSDQAFLLLAFIVCTTSVAFTSLVITAIPTLVAMGRAATSFA 141

Query: 144 KLADTAREELPGTMAAIRLSGMEISDLTLELSDLSQEIADGVNKSAQAVQAAEAGIRQIS 203
           KLADTAR+ELP T+AA+RLSGMEISDLTLELSDLSQ+I DG+NKSA+AVQAAEAGI+QI 
Sbjct: 142 KLADTARKELPSTLAAVRLSGMEISDLTLELSDLSQDITDGINKSAKAVQAAEAGIKQIG 201

Query: 204 AVAHQKTMSMIQERADLPVISLQPVVAGAAKKTSRAVGKATRTIMKMISGGESMEN 258
            +A Q+T+SMI+ERA+LP ISLQPVVAGAA+KTS A+G AT+ +M +I+GG   E+
Sbjct: 202 TLAQQQTLSMIEERANLPEISLQPVVAGAAEKTSHAIGSATKRLMNIITGGNKDED 257

[Close]

BLAST of Carg16874 vs. TAIR 10
Match: AT5G09995.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G08530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 92.8 bits (229), Expect = 4.4e-19
Identity = 66/171 (38.60%), Postives = 97/171 (56.73%), Query Frame = 0


Query: 80  QWNEEVGSPSFGFQPLAKLSLNDKASLLLTFIALTVSVAFTSLVIAAVPTLNAMRRAAIS 139
           Q    VG P      L++ +   K  +LL  +A   +++ + L  AA+PTL A ++AA S
Sbjct: 74  QLTSSVGQPPL---QLSQWTFTQKHFVLLNVVACVTAISASWLFFAAIPTLLAFKKAAES 133

Query: 140 LSKLADTAREELPGTMAAIRLSGMEISDLTLELSDLSQEIADGVNKSAQAVQAAEAGIRQ 199
           L KL D  REELP TMAA+RLSGMEISDLT+ELSDL Q I  GV  S +A++ AE  +R+
Sbjct: 134 LEKLLDVTREELPDTMAAVRLSGMEISDLTMELSDLGQGITQGVKSSTRAIRVAEDRLRR 193

Query: 200 ISAVAHQKTMSMIQERADLPVISLQPVVAGAAKKTSRAVGKATRTIMKMIS 251
           ++   +    SM +          +P++A  A+     V K  R++ ++ S
Sbjct: 194 LT---NMNPASMQEVMRQTKTDETEPMLAKQARSFREGVVKG-RSLWQLFS 237

[Close]

BLAST of Carg16874 vs. TAIR 10
Match: AT5G09995.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G08530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 92.4 bits (228), Expect = 5.8e-19
Identity = 65/171 (38.01%), Postives = 98/171 (57.31%), Query Frame = 0


Query: 80  QWNEEVGSPSFGFQPLAKLSLNDKASLLLTFIALTVSVAFTSLVIAAVPTLNAMRRAAIS 139
           Q    VG P      L++ +   K  +LL  +A   +++ + L  AA+PTL A ++AA S
Sbjct: 74  QLTSSVGQPPL---QLSQWTFTQKHFVLLNVVACVTAISASWLFFAAIPTLLAFKKAAES 133

Query: 140 LSKLADTAREELPGTMAAIRLSGMEISDLTLELSDLSQEIADGVNKSAQAVQAAEAGIRQ 199
           L KL D  REELP TMAA+RLSGMEISDLT+ELSDL Q I  GV  S +A++ AE  +R+
Sbjct: 134 LEKLLDVTREELPDTMAAVRLSGMEISDLTMELSDLGQGITQGVKSSTRAIRVAEDRLRR 193

Query: 200 ISAVAHQKTMSMIQERADLPVISLQPVVAGAAKKTSRAVGKATRTIMKMIS 251
           ++ +    +M  +  +        +P++A  A+     V K  R++ ++ S
Sbjct: 194 LTNMNPVASMQEVMRQTKTD--ETEPMLAKQARSFREGVVKG-RSLWQLFS 238

[Close]

BLAST of Carg16874 vs. TAIR 10
Match: AT5G09995.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G08530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 92.4 bits (228), Expect = 5.8e-19
Identity = 57/122 (46.72%), Postives = 78/122 (63.93%), Query Frame = 0


Query: 80  QWNEEVGSPSFGFQPLAKLSLNDKASLLLTFIALTVSVAFTSLVIAAVPTLNAMRRAAIS 139
           Q    VG P      L++ +   K  +LL  +A   +++ + L  AA+PTL A ++AA S
Sbjct: 74  QLTSSVGQPPL---QLSQWTFTQKHFVLLNVVACVTAISASWLFFAAIPTLLAFKKAAES 133

Query: 140 LSKLADTAREELPGTMAAIRLSGMEISDLTLELSDLSQEIADGVNKSAQAVQAAEAGIRQ 199
           L KL D  REELP TMAA+RLSGMEISDLT+ELSDL Q I  GV  S +A++ AE  +R+
Sbjct: 134 LEKLLDVTREELPDTMAAVRLSGMEISDLTMELSDLGQGITQGVKSSTRAIRVAEDRLRR 192

Query: 200 IS 202
           ++
Sbjct: 194 LT 192

The following BLAST results are available for this feature:

BLAST of Carg16874 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6571517.1	7.1e-136	100.00	hypothetical protein SDJN03_28245, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023553629.1	7.4e-133	98.51	uncharacterized protein LOC111811121 [Cucurbita pepo subsp. pepo]	[more]
XP_022963991.1	1.6e-132	98.13	uncharacterized protein LOC111464126 [Cucurbita moschata]	[more]
XP_022967389.1	2.4e-123	93.66	uncharacterized protein LOC111466934 [Cucurbita maxima]	[more]
XP_038889010.1	1.2e-114	85.40	uncharacterized protein LOC120078775 [Benincasa hispida]	[more]

BLAST of Carg16874 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg16874 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HHL4	7.9e-133	98.13	uncharacterized protein LOC111464126 OS=Cucurbita moschata OX=3662 GN=LOC1114641...	[more]
A0A6J1HWJ9	1.1e-123	93.66	uncharacterized protein LOC111466934 OS=Cucurbita maxima OX=3661 GN=LOC111466934...	[more]
A0A5D3DAC3	1.6e-109	82.12	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BHG6	1.6e-109	82.12	uncharacterized protein LOC103489884 OS=Cucumis melo OX=3656 GN=LOC103489884 PE=...	[more]
A0A6J1K868	3.7e-106	80.43	uncharacterized protein LOC111491526 OS=Cucurbita maxima OX=3661 GN=LOC111491526...	[more]

BLAST of Carg16874 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08530.1	1.3e-55	69.32	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G09995.3	4.4e-19	38.60	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G09995.2	5.8e-19	38.01	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G09995.1	5.8e-19	46.72	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33825:SF14	CHITINASE-LIKE PROTEIN	coord: 29..268
None	No IPR available	PANTHER	PTHR33825	CHITINASE-LIKE PROTEIN	coord: 29..268

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16874-RA	Carg16874-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016740	transferase activity