Carg16854 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16854
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	U3 small nucleolar RNA-associated protein 18 homolog
Location	Carg_Chr19: 317447 .. 322901 (+)
RNA-Seq Expression	Carg16854
Synteny	Carg16854

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTTTGAAGAGACAGAGCTGAGGCTAGGGTTGCCTGGAAATAATGTTAGATCAGAAGTGAGGAGGAAGAGAGGGTTCCATGAGGAGTCAGGTACAAATCACAAGCCTCCCCTACCCAAGTAAGTTCTACTTCGTCTTTTAGAGTTCGAGTAACGTTTTTTTAGGGTCGATAACGTAAATCACCACTGAATCGAAAAGCTTAAACGGATAGAAGTAAGTAGAAAACAGTCTTAAGTGGAGGTCAAAACGTACACGGATTGTATTTGAGTTGAGTTGGGTTGAGAGAATTTTTTGAACAAACTCGAAATTCCAGGTTGGTTAGGTTGATGACCCGAGCAACCGGAATAGAGTTCATTACTCAACCTAACCCAACCCAATTTTTATCGTTTGAGTTAGTCTAAATTAGTCGAGTTATCAAGTCATATAAGCACCCCTAATTAGAGAAAGATAAATGGCATTATAGAGGTTCTAAGTACATACAAGACCTCTAACTCTGTCCCTTAACGAGATTACTTTAACACAACCCGAGTGTTTACTTAAGCTTATGGGTTGATCGAGAATGTCGAGTAATATTGTTGTTGCGAGCTTTGTAGGGCACAAGTGGTAGGTTGGCCACCAATAAGGTCGTACAGAAAGAACAGTCTAGCCCTCCGAAAGGGTAGCAACGAGGAGGTGGTGCTAATCAGTAGGAATAAGAATGGAAATACCGGAGCAGCTAGGTTCGTGAAGGTTAGCCTCGATGGTGCACCTTATCTTCGCAAAGTCGACTTGACCATGTACAACAGCTACAAACAACTCTCCCATGCCCTAGCCAAATTCTTCGGTGCCTTCACCATTGGTATTTAACGGGTTCTCGAACTTTTAATCAATAAATTCTCGGAACATTAGAAACTAGACGTGTAATTTAACGTAATTTAACATAATTCACAGAAATATAACAGAAATTTAATAATAATTTTTTTTCATTTTCCCCAACTCTAGGTCACTGTGGATCTCAAGCAGTTGGGATGAAAGACTTCATGAATGAAAGCAAACTAATAGATCTTTTGAATGGTTCGGACTACGTTCCAACCTACCAAGACAAGGATGGTGATTGGATGCTCGTCGGTGATGTTCCATGGCAGTAAGTGATAATTATCTAGTTGGGATGAAAATATTCATTAGTCTTCAATCAAAGCAAACTAATAGATCTTCCCTGAATGGTGTCGGACTTACGTTCCAACACTACCAAGACAAGGATGGTGATTGGATGCTCGACTCGGTGATGTTCCATTGCAGTAAGTTATAATTGGAGTCTAGAATTTTTAAATATTTTATTTTAGTCTCTGACTTACTTTAAACGAACACGATCAATGGTATGATAATTATCTAGAATTTTTAAATATTTTATTTTAGTCTCACTTATAAACTCATGATCAATCCCTAAATTAGCCGATGTGGGACTTCCATCATCCAACAAAATCCACCGTGAAAGATGCAAGAAATAACTCGAGTATAATACGTCTCGCAATATCCATGCAGGATGTTTGTTGAATCTTGCAAACGTCTACGTATAATGAAAGGAAAGGAAGCCATTGACCTCGGTAAGATTGATAGATTTGTGTGTTTTCAATATCGGTGAACGTAAAGATTTGAATTTATCAAGCATATTGTTTTATTAACCATTTGAGTTATGTTTAGGTTAACTTCACCCCCGAAACAAGTCCTTCTAATCTATATCATTAACATATCGGGACGTTTTCTTTTTTTTTTTTCACCGAGGGCTGTAGAGAAATGCAAGAACTCCAAGAACTAACTTCACCTTTGATATGGGCGAGGCATGCTAATTGGTTGGTGTGATTTGCATATATATATATTATATATATCAATCATAATGTATAATATTAATTATGTATCTTTGTGTGTATACAATATGGTCTACTTTTTATTTAAGTGATTAAATTTGTTTTGTGTTAACGTTGAATATAATCTTTTGTTACCGTCCCGTTTTCGGTTCTTCCCGTTCAAACAGAAATTCTCCATCATGTTTGAGACAGGTCCTCACGGGTTAAAATTTTCCAATTTCTCTCGAGCTACAAATCCTTACTAATGTAGTCTAGTCTCAATCAAACTTACCATTTTGTATAGCTTAATACTCCCCATCGACACTGAATTAAAGGTTATAATTGATACTCGGCGACACAGATACAAATTACAATTCCATAATGTTAACGACTCGATCTCTCCCACTCTTGAAATTGCCCTCCTTCGAGAATTGCCCAATCCCACCACTAGCAGATATTGTCCTCCTTGGGATGTTTCATCTGAGCTTTCCATCAAGGTTTTAAAATGCGTCTACTAGAGAGAGGTTTCCACACCCTTGTAAAGAATGTTCCGTTTCCCTCTCCAACCGATGTGGGATCTCATAATCCATCATTCTTCGAGAACCAGTGTCCTCGCTGGCACTCGTTCTGTTCTCCAATCGATGTTGGGTCTCACAATCCACCCCCTTTAGGACCTAGAGTCCTTGCTGGCACACTGCCCCAGTGTCTGGCTATGATACCATTTGTAACAACTCAAACCCACCCATAGTAGATATTGTCCACTTTGAGCTTTGTCTCAAAGTTTTAAAATGCATCTGATAGGGAGAGGTTTTCACACACTTATAAAGAATGTTTCGTTTCTCTCTCCAATTGATGTGCGATCTCATAATTCACCCTCCTTCGAGAACCAGTGTCCTTGCTGGCACTCGTTCTCTTCTCCAATCAATGTTGGATCTCACAATCCACACCCTTGAGGACCCAGAGTCCTTGCTGGCACACTGTCTCGGTATTTGGTTATGATACCATTTGTAACAACTCAAACCCACCGATAGAGAGAGGTTTTCACACGTGGGATCTTGTGTTTAGCCTGGCCCATCCGTTGGGAAAAACAAAATTGAGCCCAAGCCCACTTTGGAAAATAAAATAAAATTAATAAATAAAACAAAGAGGAAAACCCTAACCACCGTGTAAAATAAAACGAACTCTTTCCTCTGTGCTGACTTCTTCTTCTTCACGCCGTCTCCTCCTCCGCCTCTCTCCCGTTCCTACTTTCGCCGCCGTTGTCGTTCTTTTCCGCTCGTGCCTCCGCCGCGGATTTCTTTCTTCCGTTCGTTCCGGCGCAGCACTCTGTTTGCGGTTTTGCGCTGATTTTCTACTCCTTTCTTGTTACTGGTATGTCTTTCTAACGAAAAAAATAAAAACATTCTTGCCGCAGATTGGGACGCGGTTTGTGTTTGTTGTTCTGATTCGGACATGATGAATGTGGCTTATTGTTCTTCTGTAATGTAGAATTCAACTACTTGTTTTAAAAAATTAAGACAAAAAGGGTACACAATTTACAATGAAGGGATAAATTGAGCTTATGGATCGTGGAATTTTTTACTTCTGATGCGTTTTTTGTTATCTTGTCAATATGATTGGTTTTGCAGGAGCTGAGTGGAAGATGAGTTTAATATCTCAAAATGTTGCTGTAATTAGTAGTATTGAGAAGGTTACTGAGGACAATACTGTTGTTTCTTCATCTCCGTTGAGAAAAGTAGATGCTAGTGATGTAGAAAACTCTGGGGTAGATACTACTCGGGCAAAGAAGAGAAAGAAAGAACACAAAAAAGAAGATGAGCAAATAGTAAAAGAACAACAAAAGGAAATGGAGAAGCTCGAAAACTTTCTTTTTGGATCACTCTATTCCCCTGTTGAATTTGGGAAGGATGAAGAGAAAAATGGTTTTAGTGCTGAAGAAAAGGATTCTGCTTTGTACATTATGGACCGCTCTGCAAATAATTCCCTTTCCGTGTATGAAAATGATGTTGGGCTCCTAGATGAGAGTTCGATTAAGGAGGAAGCTCAGCAAAGAAAACCGGTATGGGTCGACGAGGAAGAGGAGAAGGCCTCAGTTAATATCACTAATGTTAGTAGACTGAGAAAATTGAGGAAGGAAGAAGATGAGAAATCGATTTCGGGTTCAGAGTACGTGTCGCGACTGAGGGCTCAGCATGCCAAGCTAAACCCCGGAACCGAGTGGGCTCAACTTGATGCACAATCCAGGGGTGGCAGTGATGATGATGATGATCTAACATCAGATGATGAAAATGCAGTTGCATTGGCTGATGGTTACGATAATGTCGATTCTATTGACGATATCCTTAGAACAAATGAGAATCTTGTAGCGAAGAGTGGTGCTAAATTGTTGCCTGGTCTTCTTGAATACTCGAGACTTGTCGATGCGAACGCACAGGAGCCAGCAAATGGTCCTATCCATTCGGTTCAGTTTCACCGCAATGCTCAGTTACTGCTAGCTACTGGGTTGGATCGGAAGCTTCGATTTTTTCAGATTGATGGGAAACGGAACACCAAAATTCAGAGCATTTTTCTTGAGGATTGCCCCATAAGAAAGGCATCATTTTTGCCTGATGGATCTCAGGTCATCATATCTGGGAGGAGGAGGTTCTTCTATAGCCTCGATCTAGTGAAGGCAAAAGTAGATAAAATAGGCCCTCTTGTAGGTAGAGAGGAGAAAAGCCTTGAAGTTTTTGAAGTTTCTCCTGATTCTAGCACGGTCGCATTCATAGGTAATGAAGGCTATATCCTGTTAGTGTCGACCAAAACAAAGGAGCTCATCGGGACGCTTAAGATGAATGGAACCGTTCGTTCCTTGGCGTTTGCCGACAATGGACGACAGCTACTGAGCTCTGGCGGCGACGGGCAGGTCTACCACTGGGATTTGAGAACAAGAACATGCATCCACAAGGCTGTCGACGAAGGTTGCATCAATGGCACAGCACTTTGTACGTCTCCTAACGGAGCGTTGTTTGCAGCGGGTTCTGACAGTGGTATCGTTAACATCTACAACAGACAAGAATTCTTAGGGGGCAAGAAGAAGCCATTGAAGGCCATTGAGAATCTGACCACCAAAGTAGACTTTCTCAAGTTCAATCACGATGCTCAAATATTGGCAATCTGTTCAAGGATGAAGAAAAGTAGTTTGAAGCTGATACACGTTCCTTCTTTTACCATATTTTCGAACTGGCCGCCGCCGAAGAAGAACCTTCAGTACCCGTCATGCTTGGATTTCAGCCCCGAAGGAGGCTACATGGCTGTCGGAAATGCTGCTGGAAAGGTATTATTGTATAAACTACATCATTATCAGCATGCTTAGATTTGATCTCCATAGGCTTAATCATAATGGATTGCTACAGTTTTGACACTTTTATTATTAGTTCTTACAATCAGCTGTTACTTCAGCGAAGTGTCTTTAGTTTGTACCTTGTTTACTTATTAAGAGTCTGTTCTTTTGTTAAAAGATTAGAACTTTATATTAAGCGATTTTTTGAACTACGTTGCTCATATCTACCTCGTATGATAACCGTTGGTTTTTTGTTTTTGAGAATTAAGCTTATAAATTATGTTTTCTGATGTTGATTATTTTGCTT

mRNA sequence

ATGTCGTTTGAAGAGACAGAGCTGAGGCTAGGGTTGCCTGGAAATAATGTTAGATCAGAAGTGAGGAGGAAGAGAGGGTTCCATGAGGAGTCAGGTACAAATCACAAGCCTCCCCTACCCAAGGCACAAGTGGTAGGTTGGCCACCAATAAGGTCGTACAGAAAGAACAGTCTAGCCCTCCGAAAGGGTAGCAACGAGGAGGTGGTGCTAATCAGTAGGAATAAGAATGGAAATACCGGAGCAGCTAGGTTCGTGAAGGTTAGCCTCGATGGTGCACCTTATCTTCGCAAAGTCGACTTGACCATGTACAACAGCTACAAACAACTCTCCCATGCCCTAGCCAAATTCTTCGGTGCCTTCACCATTGGAGCTGAGTGGAAGATGAGTTTAATATCTCAAAATGTTGCTGTAATTAGTAGTATTGAGAAGGTTACTGAGGACAATACTGTTGTTTCTTCATCTCCGTTGAGAAAAGTAGATGCTAGTGATGTAGAAAACTCTGGGGTAGATACTACTCGGGCAAAGAAGAGAAAGAAAGAACACAAAAAAGAAGATGAGCAAATAGTAAAAGAACAACAAAAGGAAATGGAGAAGCTCGAAAACTTTCTTTTTGGATCACTCTATTCCCCTGTTGAATTTGGGAAGGATGAAGAGAAAAATGGTTTTAGTGCTGAAGAAAAGGATTCTGCTTTGTACATTATGGACCGCTCTGCAAATAATTCCCTTTCCGTGTATGAAAATGATGTTGGGCTCCTAGATGAGAGTTCGATTAAGGAGGAAGCTCAGCAAAGAAAACCGGTATGGGTCGACGAGGAAGAGGAGAAGGCCTCAGTTAATATCACTAATGTTAGTAGACTGAGAAAATTGAGGAAGGAAGAAGATGAGAAATCGATTTCGGGTTCAGAGTACGTGTCGCGACTGAGGGCTCAGCATGCCAAGCTAAACCCCGGAACCGAGTGGGCTCAACTTGATGCACAATCCAGGGGTGGCAGTGATGATGATGATGATCTAACATCAGATGATGAAAATGCAGTTGCATTGGCTGATGGTTACGATAATGTCGATTCTATTGACGATATCCTTAGAACAAATGAGAATCTTGTAGCGAAGAGTGGTGCTAAATTGTTGCCTGGTCTTCTTGAATACTCGAGACTTGTCGATGCGAACGCACAGGAGCCAGCAAATGGTCCTATCCATTCGGTTCAGTTTCACCGCAATGCTCAGTTACTGCTAGCTACTGGGTTGGATCGGAAGCTTCGATTTTTTCAGATTGATGGGAAACGGAACACCAAAATTCAGAGCATTTTTCTTGAGGATTGCCCCATAAGAAAGGCATCATTTTTGCCTGATGGATCTCAGGTCATCATATCTGGGAGGAGGAGGTTCTTCTATAGCCTCGATCTAGTGAAGGCAAAAGTAGATAAAATAGGCCCTCTTGTAGGTAGAGAGGAGAAAAGCCTTGAAGTTTTTGAAGTTTCTCCTGATTCTAGCACGGTCGCATTCATAGGTAATGAAGGCTATATCCTGTTAGTGTCGACCAAAACAAAGGAGCTCATCGGGACGCTTAAGATGAATGGAACCGTTCGTTCCTTGGCGTTTGCCGACAATGGACGACAGCTACTGAGCTCTGGCGGCGACGGGCAGGTCTACCACTGGGATTTGAGAACAAGAACATGCATCCACAAGGCTGTCGACGAAGGTTGCATCAATGGCACAGCACTTTGTACGTCTCCTAACGGAGCGTTGTTTGCAGCGGGTTCTGACAGTGGTATCGTTAACATCTACAACAGACAAGAATTCTTAGGGGGCAAGAAGAAGCCATTGAAGGCCATTGAGAATCTGACCACCAAAGTAGACTTTCTCAAGTTCAATCACGATGCTCAAATATTGGCAATCTGTTCAAGGATGAAGAAAAGTAGTTTGAAGCTGATACACGTTCCTTCTTTTACCATATTTTCGAACTGGCCGCCGCCGAAGAAGAACCTTCAGTACCCGTCATGCTTGGATTTCAGCCCCGAAGGAGGCTACATGGCTGTCGGAAATGCTGCTGGAAAGGTATTATTGTATAAACTACATCATTATCAGCATGCTTAGATTTGATCTCCATAGGCTTAATCATAATGGATTGCTACAGTTTTGACACTTTTATTATTAGTTCTTACAATCAGCTGTTACTTCAGCGAAGTGTCTTTAGTTTGTACCTTGTTTACTTATTAAGAGTCTGTTCTTTTGTTAAAAGATTAGAACTTTATATTAAGCGATTTTTTGAACTACGTTGCTCATATCTACCTCGTATGATAACCGTTGGTTTTTTGTTTTTGAGAATTAAGCTTATAAATTATGTTTTCTGATGTTGATTATTTTGCTT

Coding sequence (CDS)

ATGTCGTTTGAAGAGACAGAGCTGAGGCTAGGGTTGCCTGGAAATAATGTTAGATCAGAAGTGAGGAGGAAGAGAGGGTTCCATGAGGAGTCAGGTACAAATCACAAGCCTCCCCTACCCAAGGCACAAGTGGTAGGTTGGCCACCAATAAGGTCGTACAGAAAGAACAGTCTAGCCCTCCGAAAGGGTAGCAACGAGGAGGTGGTGCTAATCAGTAGGAATAAGAATGGAAATACCGGAGCAGCTAGGTTCGTGAAGGTTAGCCTCGATGGTGCACCTTATCTTCGCAAAGTCGACTTGACCATGTACAACAGCTACAAACAACTCTCCCATGCCCTAGCCAAATTCTTCGGTGCCTTCACCATTGGAGCTGAGTGGAAGATGAGTTTAATATCTCAAAATGTTGCTGTAATTAGTAGTATTGAGAAGGTTACTGAGGACAATACTGTTGTTTCTTCATCTCCGTTGAGAAAAGTAGATGCTAGTGATGTAGAAAACTCTGGGGTAGATACTACTCGGGCAAAGAAGAGAAAGAAAGAACACAAAAAAGAAGATGAGCAAATAGTAAAAGAACAACAAAAGGAAATGGAGAAGCTCGAAAACTTTCTTTTTGGATCACTCTATTCCCCTGTTGAATTTGGGAAGGATGAAGAGAAAAATGGTTTTAGTGCTGAAGAAAAGGATTCTGCTTTGTACATTATGGACCGCTCTGCAAATAATTCCCTTTCCGTGTATGAAAATGATGTTGGGCTCCTAGATGAGAGTTCGATTAAGGAGGAAGCTCAGCAAAGAAAACCGGTATGGGTCGACGAGGAAGAGGAGAAGGCCTCAGTTAATATCACTAATGTTAGTAGACTGAGAAAATTGAGGAAGGAAGAAGATGAGAAATCGATTTCGGGTTCAGAGTACGTGTCGCGACTGAGGGCTCAGCATGCCAAGCTAAACCCCGGAACCGAGTGGGCTCAACTTGATGCACAATCCAGGGGTGGCAGTGATGATGATGATGATCTAACATCAGATGATGAAAATGCAGTTGCATTGGCTGATGGTTACGATAATGTCGATTCTATTGACGATATCCTTAGAACAAATGAGAATCTTGTAGCGAAGAGTGGTGCTAAATTGTTGCCTGGTCTTCTTGAATACTCGAGACTTGTCGATGCGAACGCACAGGAGCCAGCAAATGGTCCTATCCATTCGGTTCAGTTTCACCGCAATGCTCAGTTACTGCTAGCTACTGGGTTGGATCGGAAGCTTCGATTTTTTCAGATTGATGGGAAACGGAACACCAAAATTCAGAGCATTTTTCTTGAGGATTGCCCCATAAGAAAGGCATCATTTTTGCCTGATGGATCTCAGGTCATCATATCTGGGAGGAGGAGGTTCTTCTATAGCCTCGATCTAGTGAAGGCAAAAGTAGATAAAATAGGCCCTCTTGTAGGTAGAGAGGAGAAAAGCCTTGAAGTTTTTGAAGTTTCTCCTGATTCTAGCACGGTCGCATTCATAGGTAATGAAGGCTATATCCTGTTAGTGTCGACCAAAACAAAGGAGCTCATCGGGACGCTTAAGATGAATGGAACCGTTCGTTCCTTGGCGTTTGCCGACAATGGACGACAGCTACTGAGCTCTGGCGGCGACGGGCAGGTCTACCACTGGGATTTGAGAACAAGAACATGCATCCACAAGGCTGTCGACGAAGGTTGCATCAATGGCACAGCACTTTGTACGTCTCCTAACGGAGCGTTGTTTGCAGCGGGTTCTGACAGTGGTATCGTTAACATCTACAACAGACAAGAATTCTTAGGGGGCAAGAAGAAGCCATTGAAGGCCATTGAGAATCTGACCACCAAAGTAGACTTTCTCAAGTTCAATCACGATGCTCAAATATTGGCAATCTGTTCAAGGATGAAGAAAAGTAGTTTGAAGCTGATACACGTTCCTTCTTTTACCATATTTTCGAACTGGCCGCCGCCGAAGAAGAACCTTCAGTACCCGTCATGCTTGGATTTCAGCCCCGAAGGAGGCTACATGGCTGTCGGAAATGCTGCTGGAAAGGTATTATTGTATAAACTACATCATTATCAGCATGCTTAG

Protein sequence

MSFEETELRLGLPGNNVRSEVRRKRGFHEESGTNHKPPLPKAQVVGWPPIRSYRKNSLALRKGSNEEVVLISRNKNGNTGAARFVKVSLDGAPYLRKVDLTMYNSYKQLSHALAKFFGAFTIGAEWKMSLISQNVAVISSIEKVTEDNTVVSSSPLRKVDASDVENSGVDTTRAKKRKKEHKKEDEQIVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNGFSAEEKDSALYIMDRSANNSLSVYENDVGLLDESSIKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYDNVDSIDDILRTNENLVAKSGAKLLPGLLEYSRLVDANAQEPANGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRRFFYSLDLVKAKVDKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADNGRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSCLDFSPEGGYMAVGNAAGKVLLYKLHHYQHA

Homology

[Close]

BLAST of Carg16854 vs. NCBI nr
Match: KAG7011246.1 (U3 small nucleolar RNA-associated protein 18-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1360.9 bits (3521), Expect = 0.0e+00
Identity = 697/697 (100.00%), Postives = 697/697 (100.00%), Query Frame = 0


Query: 1   MSFEETELRLGLPGNNVRSEVRRKRGFHEESGTNHKPPLPKAQVVGWPPIRSYRKNSLAL 60
           MSFEETELRLGLPGNNVRSEVRRKRGFHEESGTNHKPPLPKAQVVGWPPIRSYRKNSLAL
Sbjct: 1   MSFEETELRLGLPGNNVRSEVRRKRGFHEESGTNHKPPLPKAQVVGWPPIRSYRKNSLAL 60

Query: 61  RKGSNEEVVLISRNKNGNTGAARFVKVSLDGAPYLRKVDLTMYNSYKQLSHALAKFFGAF 120
           RKGSNEEVVLISRNKNGNTGAARFVKVSLDGAPYLRKVDLTMYNSYKQLSHALAKFFGAF
Sbjct: 61  RKGSNEEVVLISRNKNGNTGAARFVKVSLDGAPYLRKVDLTMYNSYKQLSHALAKFFGAF 120

Query: 121 TIGAEWKMSLISQNVAVISSIEKVTEDNTVVSSSPLRKVDASDVENSGVDTTRAKKRKKE 180
           TIGAEWKMSLISQNVAVISSIEKVTEDNTVVSSSPLRKVDASDVENSGVDTTRAKKRKKE
Sbjct: 121 TIGAEWKMSLISQNVAVISSIEKVTEDNTVVSSSPLRKVDASDVENSGVDTTRAKKRKKE 180

Query: 181 HKKEDEQIVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNGFSAEEKDSALYIMDRSANN 240
           HKKEDEQIVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNGFSAEEKDSALYIMDRSANN
Sbjct: 181 HKKEDEQIVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNGFSAEEKDSALYIMDRSANN 240

Query: 241 SLSVYENDVGLLDESSIKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISG 300
           SLSVYENDVGLLDESSIKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISG
Sbjct: 241 SLSVYENDVGLLDESSIKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISG 300

Query: 301 SEYVSRLRAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYDNVDSIDDI 360
           SEYVSRLRAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYDNVDSIDDI
Sbjct: 301 SEYVSRLRAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYDNVDSIDDI 360

Query: 361 LRTNENLVAKSGAKLLPGLLEYSRLVDANAQEPANGPIHSVQFHRNAQLLLATGLDRKLR 420
           LRTNENLVAKSGAKLLPGLLEYSRLVDANAQEPANGPIHSVQFHRNAQLLLATGLDRKLR
Sbjct: 361 LRTNENLVAKSGAKLLPGLLEYSRLVDANAQEPANGPIHSVQFHRNAQLLLATGLDRKLR 420

Query: 421 FFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRRFFYSLDLVKAKVDKIGPLV 480
           FFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRRFFYSLDLVKAKVDKIGPLV
Sbjct: 421 FFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRRFFYSLDLVKAKVDKIGPLV 480

Query: 481 GREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADNGRQL 540
           GREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADNGRQL
Sbjct: 481 GREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADNGRQL 540

Query: 541 LSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEF 600
           LSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEF
Sbjct: 541 LSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEF 600

Query: 601 LGGKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKK 660
           LGGKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKK
Sbjct: 601 LGGKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKK 660

Query: 661 NLQYPSCLDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 698
           NLQYPSCLDFSPEGGYMAVGNAAGKVLLYKLHHYQHA
Sbjct: 661 NLQYPSCLDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 697

[Close]

BLAST of Carg16854 vs. NCBI nr
Match: KAG6571483.1 (U3 small nucleolar RNA-associated protein 18-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1296.2 bits (3353), Expect = 0.0e+00
Identity = 681/754 (90.32%), Postives = 682/754 (90.45%), Query Frame = 0


Query: 1   MSFEETELRLGLPGNNVRSEVRRKRGFHEESGTNHKPPLPKAQVVGWPPIRSYRKNSLAL 60
           MSFEETELRLGLPGNNVRSEVRRKRGFHEE GTNHKPPLPKAQVVGWPPIRSYRKNSLAL
Sbjct: 1   MSFEETELRLGLPGNNVRSEVRRKRGFHEEPGTNHKPPLPKAQVVGWPPIRSYRKNSLAL 60

Query: 61  RKGSNEEVVLISRNKNGNTGAARFVKVSLDGAPYLRKVDLTMYNSYKQLSHALAKFFGAF 120
           RKGSNEEVVLISRNKNGN GAARFVKVSLDGAPYLRKVDLTMYNSYKQLSHALAKFFGAF
Sbjct: 61  RKGSNEEVVLISRNKNGNIGAARFVKVSLDGAPYLRKVDLTMYNSYKQLSHALAKFFGAF 120

Query: 121 TI---------------------------------------------------------- 180
           TI                                                          
Sbjct: 121 TIGHCGSQAVGMKDFMNESKLIDLLNGSDYVPTYQDKDGDWMLVGDVPWQMFVESCKRLR 180

Query: 181 ----------GAEWKMSLISQNVAVISSIEKVTEDNTVVSSSPLRKVDASDVENSGVDTT 240
                     GAEWKMSLISQNVAVISSIEKV EDNTVVSSSPLRKVDASDVENSGVDTT
Sbjct: 181 IMKGKEAIDLGAEWKMSLISQNVAVISSIEKVIEDNTVVSSSPLRKVDASDVENSGVDTT 240

Query: 241 RAKKRKKEHKKEDEQIVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNGFSAEEKDSALY 300
           RAKKRKKEHKKEDEQIVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNGFSAEEKDSALY
Sbjct: 241 RAKKRKKEHKKEDEQIVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNGFSAEEKDSALY 300

Query: 301 IMDRSANNSLSVYENDVGLLDESSIKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKE 360
           IMDRSANNSLSVYENDVGLLDESS KEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKE
Sbjct: 301 IMDRSANNSLSVYENDVGLLDESSNKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKE 360

Query: 361 EDEKSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYD 420
           EDEKSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYD
Sbjct: 361 EDEKSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYD 420

Query: 421 NVDSIDDILRTNENLVAKSGAKLLPGLLEYSRLVDANAQEPANGPIHSVQFHRNAQLLLA 480
           NVDSIDDILRTNENLVAKSGAKLLPGLLEYSRLVDANAQEP+NGPIHSVQFHRNAQLLLA
Sbjct: 421 NVDSIDDILRTNENLVAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLA 480

Query: 481 TGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRRFFYSLDLVKAK 540
           TGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRRFFYSLDLVKAK
Sbjct: 481 TGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRRFFYSLDLVKAK 540

Query: 541 VDKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLA 600
           VDKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLA
Sbjct: 541 VDKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLA 600

Query: 601 FADNGRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIV 660
           FADNGRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIV
Sbjct: 601 FADNGRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIV 660

Query: 661 NIYNRQEFLGGKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIF 687
           NIYNRQEFLGGKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIF
Sbjct: 661 NIYNRQEFLGGKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIF 720

[Close]

BLAST of Carg16854 vs. NCBI nr
Match: XP_022963504.1 (U3 small nucleolar RNA-associated protein 18 homolog [Cucurbita moschata])

HSP 1 Score: 1098.6 bits (2840), Expect = 0.0e+00
Identity = 566/570 (99.30%), Postives = 569/570 (99.82%), Query Frame = 0


Query: 128 MSLISQNVAVISSIEKVTEDNTVVSSSPLRKVDASDVENSGVDTTRAKKRKKEHKKEDEQ 187
           MSLISQNVAVISSIEKVTEDNTVVSSSPLRKVDASDVENSGVDTTRAKKRKKEHKKEDEQ
Sbjct: 1   MSLISQNVAVISSIEKVTEDNTVVSSSPLRKVDASDVENSGVDTTRAKKRKKEHKKEDEQ 60

Query: 188 IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNGFSAEEKDSALYIMDRSANNSLSVYEN 247
           IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNGFSAEEKDSALYIMDRSANNSLSVYEN
Sbjct: 61  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNGFSAEEKDSALYIMDRSANNSLSVYEN 120

Query: 248 DVGLLDESSIKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 307
           DVGLLDESS KEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL
Sbjct: 121 DVGLLDESSNKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 180

Query: 308 RAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYDNVDSIDDILRTNENL 367
           RAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYDNVDSIDDILRTNENL
Sbjct: 181 RAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYDNVDSIDDILRTNENL 240

Query: 368 VAKSGAKLLPGLLEYSRLVDANAQEPANGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 427
           VAKSGAKLLPGLLEYSRLVDANAQEP+NGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK
Sbjct: 241 VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 300

Query: 428 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRRFFYSLDLVKAKVDKIGPLVGREEKSL 487
           RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRR+FFYSLDLVKAKVDKIGPLVGREEKSL
Sbjct: 301 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 360

Query: 488 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADNGRQLLSSGGDG 547
           EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFAD+GRQLLSSGGDG
Sbjct: 361 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDG 420

Query: 548 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 607
           QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP
Sbjct: 421 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 480

Query: 608 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 667
           LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC
Sbjct: 481 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 540

Query: 668 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 698
           LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA
Sbjct: 541 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 570

[Close]

BLAST of Carg16854 vs. NCBI nr
Match: XP_023511721.1 (U3 small nucleolar RNA-associated protein 18 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1073.5 bits (2775), Expect = 5.4e-310
Identity = 555/570 (97.37%), Postives = 560/570 (98.25%), Query Frame = 0


Query: 128 MSLISQNVAVISSIEKVTEDNTVVSSSPLRKVDASDVENSGVDTTRAKKRKKEHKKEDEQ 187
           MSLISQNVAVISS EKV  DNTV SSS LRKVDASDVENSG DTTRAKKRKKEHKKEDEQ
Sbjct: 1   MSLISQNVAVISSTEKVNGDNTVGSSSLLRKVDASDVENSGADTTRAKKRKKEHKKEDEQ 60

Query: 188 IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNGFSAEEKDSALYIMDRSANNSLSVYEN 247
           IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKN FSAEEK  ALYIMDRSANNSLSVYEN
Sbjct: 61  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSANNSLSVYEN 120

Query: 248 DVGLLDESSIKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 307
           DVGLLDESS KEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL
Sbjct: 121 DVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 180

Query: 308 RAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYDNVDSIDDILRTNENL 367
           RAQHAKLNPGTEWAQLDAQSRGGSDDDDDL+SDDENAVALADGYDNVDSIDDILRTNENL
Sbjct: 181 RAQHAKLNPGTEWAQLDAQSRGGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNENL 240

Query: 368 VAKSGAKLLPGLLEYSRLVDANAQEPANGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 427
           VAKSGAKLLPGLLEYSRLVDANAQEP+NGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK
Sbjct: 241 VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 300

Query: 428 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRRFFYSLDLVKAKVDKIGPLVGREEKSL 487
           RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRR+FFYSLDLVKAKVDKIGPLVGREEKSL
Sbjct: 301 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 360

Query: 488 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADNGRQLLSSGGDG 547
           EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFAD+G+QLLSSGGDG
Sbjct: 361 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGQQLLSSGGDG 420

Query: 548 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 607
           QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP
Sbjct: 421 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 480

Query: 608 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 667
           LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC
Sbjct: 481 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 540

Query: 668 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 698
           LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA
Sbjct: 541 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 570

[Close]

BLAST of Carg16854 vs. NCBI nr
Match: XP_022967509.1 (U3 small nucleolar RNA-associated protein 18 homolog [Cucurbita maxima])

HSP 1 Score: 1071.2 bits (2769), Expect = 3.7e-309
Identity = 554/570 (97.19%), Postives = 559/570 (98.07%), Query Frame = 0


Query: 128 MSLISQNVAVISSIEKVTEDNTVVSSSPLRKVDASDVENSGVDTTRAKKRKKEHKKEDEQ 187
           MSLISQNVAVISS E V  DNTV SSS LRKVDASDVENSGVDTTR+KKRKKEHKKEDEQ
Sbjct: 1   MSLISQNVAVISSTENVNGDNTVGSSSLLRKVDASDVENSGVDTTRSKKRKKEHKKEDEQ 60

Query: 188 IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNGFSAEEKDSALYIMDRSANNSLSVYEN 247
           IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKN FSAEEK  ALYIMDRSANNSLSVYEN
Sbjct: 61  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSANNSLSVYEN 120

Query: 248 DVGLLDESSIKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 307
           DVGLLDESS KEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL
Sbjct: 121 DVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 180

Query: 308 RAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYDNVDSIDDILRTNENL 367
           RAQHAKLNPGTEWAQLDAQSR GSDDDDDL+SDDENAVALADGYDNVDSIDDILRTNENL
Sbjct: 181 RAQHAKLNPGTEWAQLDAQSRSGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNENL 240

Query: 368 VAKSGAKLLPGLLEYSRLVDANAQEPANGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 427
           VAKSGAKLLPGLLEYSRLVDANAQEP+NGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK
Sbjct: 241 VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 300

Query: 428 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRRFFYSLDLVKAKVDKIGPLVGREEKSL 487
           RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRR+FFYSLDLVKAKVDKIGPLVGREEKSL
Sbjct: 301 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 360

Query: 488 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADNGRQLLSSGGDG 547
           EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFAD+GRQLLSSGGDG
Sbjct: 361 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDG 420

Query: 548 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 607
           QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP
Sbjct: 421 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 480

Query: 608 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 667
           LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC
Sbjct: 481 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 540

Query: 668 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 698
           LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA
Sbjct: 541 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 570

[Close]

BLAST of Carg16854 vs. ExPASy Swiss-Prot
Match: Q9FMU5 (U3 small nucleolar RNA-associated protein 18 homolog OS=Arabidopsis thaliana OX=3702 GN=At5g14050 PE=1 SV=1)

HSP 1 Score: 672.9 bits (1735), Expect = 3.8e-192
Identity = 353/546 (64.65%), Postives = 427/546 (78.21%), Query Frame = 0


Query: 160 DASDVENSGV--DTTRAKKRKKEHKKEDEQIVKEQQKEMEKLENFLFGSLYSPVEFGKDE 219
           D  D E  G   D TR K+RK E  KE +++ + +  EM+KLEN +FGSLYSPV FGK+E
Sbjct: 24  DVEDEEEIGSDDDLTRGKRRKTE--KEKQKLEESELVEMKKLENLIFGSLYSPVTFGKEE 83

Query: 220 EKNGFSAEEKDSALYIMDRSANNSLSVYENDVGLLDESSIKEEAQ-----QRKPVWVDEE 279
           E++G       SAL+ +DRSA   +  YE+D    +E S +E  Q     + +  W DEE
Sbjct: 84  EEDG-------SALFHVDRSAVRQIPDYEDDGDDDEELSDEENGQVVAIRKGEAAWEDEE 143

Query: 280 EEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGSD 339
           E++ +V+I +V+RLRKLRKEE+E  ISGSEY++RLRA HAKLNPGT+WA+ D+Q   G  
Sbjct: 144 EKQINVDIASVNRLRKLRKEENEGLISGSEYIARLRAHHAKLNPGTDWARPDSQIVDGES 203

Query: 340 DDDDLTSDDENAVALADGYDNVDSIDDILRTNENLVAKS-GAKLLPGLLEYSRLVDANAQ 399
            DDD T D                +DDILRTNE+LV KS G KL  G LEYS+LVDANA 
Sbjct: 204 SDDDDTQD--------------GGVDDILRTNEDLVVKSRGNKLCAGRLEYSKLVDANAA 263

Query: 400 EPANGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDG 459
           +P+NGPI+SV FH+NAQLLL  GLDR+LRFFQIDGKRNTKIQSIFLEDCPIRKA+FLP+G
Sbjct: 264 DPSNGPINSVHFHQNAQLLLTAGLDRRLRFFQIDGKRNTKIQSIFLEDCPIRKAAFLPNG 323

Query: 460 SQVIISGRRRFFYSLDLVKAKVDKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLV 519
           SQVI+SGRR+FFYS DL KAK DKIGPLVGREEKSLE FEVS DS+T+AF+GNEGYILLV
Sbjct: 324 SQVIVSGRRKFFYSFDLEKAKFDKIGPLVGREEKSLEYFEVSQDSNTIAFVGNEGYILLV 383

Query: 520 STKTKELIGTLKMNGTVRSLAFADNGRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCING 579
           STKTKELIGTLKMNG+VRSLAF+++G+ LLSSGGDGQVY WDLRT  C++K VDEG   G
Sbjct: 384 STKTKELIGTLKMNGSVRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVDEGSTCG 443

Query: 580 TALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKPLKAIENLTTKVDFLKFNHDAQILA 639
           T+LC+S NGALFA+G+D GIVNIY + EF+GGK+KP+K ++NLT+K+DF+KFNHDAQILA
Sbjct: 444 TSLCSSLNGALFASGTDRGIVNIYKKSEFVGGKRKPIKTVDNLTSKIDFMKFNHDAQILA 503

Query: 640 ICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSCLDFSPEGGYMAVGNAAGKVLLYKL 698
           I S M K+S+KL+HVPS T+FSNWPPP   + YP CLDFSP  G+MA+GNAAGKVLLYKL
Sbjct: 504 IVSTMNKNSVKLVHVPSLTVFSNWPPPNSTMHYPRCLDFSPGSGFMAMGNAAGKVLLYKL 546

[Close]

BLAST of Carg16854 vs. ExPASy Swiss-Prot
Match: Q9Y5J1 (U3 small nucleolar RNA-associated protein 18 homolog OS=Homo sapiens OX=9606 GN=UTP18 PE=1 SV=3)

HSP 1 Score: 300.8 bits (769), Expect = 3.9e-80
Identity = 181/452 (40.04%), Postives = 262/452 (57.96%), Query Frame = 0


Query: 254 ESSIKEEAQ-----QRKPVWVDEEEEKASVNITNVSRLRK-LRKEEDEKSISGSEYVSRL 313
           +S ++ EA+     Q+KPVWVDEE+E   +     +R RK + K   E  +S      RL
Sbjct: 123 DSEVENEAKGNFPPQKKPVWVDEEDEDEEMVDMMNNRFRKDMMKNASESKLSKDNLKKRL 182

Query: 314 RA--QHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYDNVDSIDDILRTNE 373
           +   QHA +     WA  +   R  S DD+  + +DE               DD+L+   
Sbjct: 183 KEEFQHA-MGGVPAWA--ETTKRKTSSDDE--SEEDE---------------DDLLQRTG 242

Query: 374 NLVAKSGAKLLPGLLEYSRLVDANAQEPANGPIHSVQFHRNAQLLLATGLDRKLRFFQID 433
           N ++ S   L  G+L+      ANA+ P    I SVQFH  AQ+++  GLD  +  FQ+D
Sbjct: 243 NFISTS-TSLPRGILKMKNCQHANAERPTVARISSVQFHPGAQIVMVAGLDNAVSLFQVD 302

Query: 434 GKRNTKIQSIFLEDCPIRKASFLPDGSQVI-ISGRRRFFYSLDLVKAKVDKIGPLVGREE 493
           GK N KIQSI+LE  PI KA F  +G +V+  S   +  Y  D++  K+  +  + G +E
Sbjct: 303 GKTNPKIQSIYLERFPIFKACFSANGEEVLATSTHSKVLYVYDMLAGKLIPVHQVRGLKE 362

Query: 494 KSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADNGRQLLSSG 553
           K +  FEVSPD S +   G  GY+ L++ KTKELIG++K+NG V +  F+ + +++ +S 
Sbjct: 363 KIVRSFEVSPDGSFLLINGIAGYLHLLAMKTKELIGSMKINGRVAASTFSSDSKKVYASS 422

Query: 554 GDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFL-GG 613
           GDG+VY WD+ +R C+++ VDEG + G ++ TS NG   A GS+ G+VNIYN+   L   
Sbjct: 423 GDGEVYVWDVNSRKCLNRFVDEGSLYGLSIATSRNGQYVACGSNCGVVNIYNQDSCLQET 482

Query: 614 KKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPK-KNL 673
             KP+KAI NL T V  L FN   +ILAI S   K +++L+H+PS T+FSN+P  K KN+
Sbjct: 483 NPKPIKAIMNLVTGVTSLTFNPTTEILAIASEKMKEAVRLVHLPSCTVFSNFPVIKNKNI 542

Query: 674 QYPSCLDFSPEGGYMAVGNAAGKVLLYKLHHY 695
            +   +DFSP  GY A+GN  GK L+Y+LHHY
Sbjct: 543 SHVHTMDFSPRSGYFALGNEKGKALMYRLHHY 553

[Close]

BLAST of Carg16854 vs. ExPASy Swiss-Prot
Match: Q5SSI6 (U3 small nucleolar RNA-associated protein 18 homolog OS=Mus musculus OX=10090 GN=Utp18 PE=1 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 9.1e-77
Identity = 190/556 (34.17%), Postives = 304/556 (54.68%), Query Frame = 0


Query: 152 SSSPLRKVDASDVENSGVDTTRAKKRKKEHKKEDEQIVKEQQKEMEK-LENFLFGSLYSP 211
           SS   +  +     ++G     A++ +   ++ +   +++ +   E+ LE  +FG +   
Sbjct: 37  SSQRTQPAEPRAAPSAGSAAAAAEEEESRLRQRNRLTLEDDKPAAERCLEQLVFGDV--- 96

Query: 212 VEFGKDEEKNGFSAEEKDSALYIMDRSANNSLSVYENDVGLLDESSIKEEA------QQR 271
                         E+ + AL    RS+   L       G  DES ++ EA      +++
Sbjct: 97  --------------EDDEDALLQRLRSSRGQLH------GSSDESEVENEAKDIFSQKKK 156

Query: 272 KPVWVDEEEEKASVNITNVSRLRK-LRKEEDEKSISGSEYVSRLRA--QHAKLNPGTEWA 331
           +PVWVDE++E   +   + +R RK + K   E  +S  +   RL+   QHA +    +WA
Sbjct: 157 QPVWVDEDDEDEEIVDMSNNRFRKDIMKNASESKLSKDKLQKRLKEEFQHA-MGGVPDWA 216

Query: 332 QLDAQSRGGSDDDDDLTSDDENAVALADGYDNVDSIDDILRTNENLVAKSGAKLLPGLLE 391
           +  ++ R  SDD+ +   +DE               DD+L+   N ++ S   L  G+L+
Sbjct: 217 EAGSKRRTSSDDESE---EDE---------------DDLLQRTGNFISTS-TSLPRGILK 276

Query: 392 YSRLVDANAQEPANGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCP 451
                 ANA+ P    I SVQFH  AQ+++ +G+D  +  FQ+DGK N KIQSI+LE  P
Sbjct: 277 MKNCRPANAERPTTARISSVQFHPGAQVVMVSGVDNAISLFQVDGKTNPKIQSIYLEKFP 336

Query: 452 IRKASFLPDGSQVI-ISGRRRFFYSLDLVKAKVDKIGPLVGREEKSLEVFEVSPDSSTVA 511
           I KA F  +G +V+  S   +  Y  D++  K+  +  + G +EK+++ FEVSPD S + 
Sbjct: 337 IFKACFSANGEEVLATSMHSKVLYVYDMLAGKLIPVHQVRGLKEKTVKQFEVSPDGSFLL 396

Query: 512 FIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADNGRQLLSSGGDGQVYHWDLRTRTCI 571
             G  G+  L+S KTKELIG++K+NG + +  F+ + +++ +   +G+VY WD+ +R C+
Sbjct: 397 ISGIAGFSHLLSMKTKELIGSMKINGRIAASTFSSDSKRIYTYSENGEVYVWDVNSRKCM 456

Query: 572 HKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFL-GGKKKPLKAIENLTTKVD 631
           ++ +DEG + G ++  S NG   A GS SG+VNIYN+   L     KP+KAI NL T V 
Sbjct: 457 NRFLDEGSLCGLSIAASKNGQYVACGSKSGVVNIYNQDSCLQQTNPKPIKAIMNLVTGVT 516

Query: 632 FLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKN-LQYPSCLDFSPEGGYMA 691
            L FN   +ILA+ SR  K +++L+H+PS T+FSN+P  KK+ L     +DFSP GGY A
Sbjct: 517 SLAFNPTTEILAVASRKMKEAVRLVHLPSCTVFSNFPVFKKSTLSRVQTMDFSPRGGYFA 549

Query: 692 VGNAAGKVLLYKLHHY 695
           +GN  G+ L+Y+LHHY
Sbjct: 577 LGNEKGRALMYRLHHY 549

[Close]

BLAST of Carg16854 vs. ExPASy Swiss-Prot
Match: P78750 (Probable U3 small nucleolar RNA-associated protein 18 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC29A3.06 PE=2 SV=3)

HSP 1 Score: 273.9 bits (699), Expect = 5.1e-72
Identity = 172/530 (32.45%), Postives = 284/530 (53.58%), Query Frame = 0


Query: 191 EQQKEMEKLENFLFGSLYSPVEFGKDE---------------EKNGFSAEE----KDSAL 250
           E+  E  +LEN +FG++ +   F   E               E N    +E    +D+ L
Sbjct: 2   EKDTEELELENAVFGNINNFSSFLDKENETFDVMMNEAPELSEDNDAQEDELEKLEDAEL 61

Query: 251 YIMDR-SANNSLSVYENDVGLLDESSIK--EEAQQRKP-VWVDEEEEKASVNITNVSRLR 310
           ++ D  SA+ +      D+ +  ++++K  EEA    P +W D ++E+  +++ + SRLR
Sbjct: 62  FMFDTGSADGAKDSVPLDI-IAGDNTVKEDEEASNEIPSIWEDSDDERLMISLQDHSRLR 121

Query: 311 KLRKEEDEKSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVAL 370
           KLR+ EDE  ++G +Y  RLR Q  ++ P  EWA+             D+T +++   AL
Sbjct: 122 KLRQYEDEDMVNGLQYARRLRTQFERVYPVPEWAK-----------KQDVTEEEDEFNAL 181

Query: 371 ADGYDNVDSIDDILRTNENLVAKSGAKLLPGLLEYSRLVDANAQEPANGPIHSVQFHRNA 430
           ++      S+  + +++ + + +S   L PG +   RL DAN Q P++  I  +  H   
Sbjct: 182 SEKSVIPKSLKSLFKSSVSYINQSSKLLAPGTINIKRLKDANFQAPSHSGIRCMSIHPYF 241

Query: 431 QLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRRFFYSLD 490
            LLL  G DR LR +Q+DGK N  + S+ L    ++ A F PDG +VI +GRR++ Y  D
Sbjct: 242 PLLLTCGFDRTLRIYQLDGKVNPLVTSLHLRSSALQTALFHPDGKRVIAAGRRKYMYIWD 301

Query: 491 LVKAKVDKIGPLVGRE--EKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMN 550
           L  A+V K+  + G+E  + S+E F V P    +A  G  G+I L+   T +   + K+ 
Sbjct: 302 LESAQVQKVSRMYGQENFQPSMERFHVDPTGKYIALEGRSGHINLLHALTGQFATSFKIE 361

Query: 551 GTVRSLAFADNGRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAA 610
           G +  + F  +G ++L      +V+H+++  R+ + +   +  ++ T  C  P+    A 
Sbjct: 362 GVLSDVLFTSDGSEMLVLSYGAEVWHFNVEQRSVVRRWQVQDGVSTTHFCLDPSNKYLAI 421

Query: 611 GSDSGIVNIYNRQ-EFLGGKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLI 670
           GS SGIVNIY+ Q        KP+  ++N+T  ++ + F+ D+Q+LAI SR KK +L+L+
Sbjct: 422 GSKSGIVNIYDLQTSNADAAPKPVTTLDNITFSINSMSFSQDSQVLAIASRGKKDTLRLV 481

Query: 671 HVPSFTIFSNWPPPKKNLQYPSCLDFSPEGGYMAVGNAAGKVLLYKLHHY 695
           HVPSF++F NWP     L   +CL F  +GG + VGN AG+V L+KL HY
Sbjct: 482 HVPSFSVFRNWPTSATPLGRVTCLAFG-KGGELCVGNEAGRVGLWKLAHY 518

[Close]

BLAST of Carg16854 vs. ExPASy Swiss-Prot
Match: P40362 (U3 small nucleolar RNA-associated protein 18 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UTP18 PE=1 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 2.2e-54
Identity = 180/565 (31.86%), Postives = 277/565 (49.03%), Query Frame = 0


Query: 184 EDEQIVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNGFSAEEKDSALYIMDRSAN-NSL 243
           E E  V++Q+ E  + +N             +DE +NG      +  L+ +D   N +S 
Sbjct: 48  EQEMDVEDQEDEGSESDN-----------SEEDEAQNGELDHVNNDQLFFVDDGGNEDSQ 107

Query: 244 SVYENDVGLLDE---SSIKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSIS 303
              E+ + + DE   SS        +  W+D ++EK  V I   ++ +KLR   +E  I+
Sbjct: 108 DKNEDTMDVDDEDDSSSDDYSEDSEEAAWIDSDDEKIKVPILVTNKTKKLRTSYNESKIN 167

Query: 304 GSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYDNVDSIDD 363
           G  Y++RLR+Q  K+ P  +W  +D +S    DD++D   +  N V   D    ++++  
Sbjct: 168 GVHYINRLRSQFEKIYPRPKW--VDDESDSELDDEEDDEEEGSNNVINGD----INALTK 227

Query: 364 ILRTNENLV-AKSGAKLL-PGLLEYSRLVDANAQEPANGPIHSVQFHRNAQLLLATGLDR 423
           IL T  N     S +KLL P  L+  RL DANA  P++  I S+ FH +  LLL  G D+
Sbjct: 228 ILSTTYNYKDTLSNSKLLPPKKLDIVRLKDANASHPSHSAIQSLSFHPSKPLLLTGGYDK 287

Query: 424 KLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGS-----QVIISGRRRFFYSLDL---- 483
            LR + IDGK N  + S+ L   PI+  +F    S      +  +GRRR+ +S DL    
Sbjct: 288 TLRIYHIDGKTNHLVTSLHLVGSPIQTCTFYTSLSNQNQQNIFTAGRRRYMHSWDLSLEN 347

Query: 484 ----VKAKVDKIGPLVGRE--EKSLEVFEVS--PDSST------VAFIGNEGYI-LLVST 543
                 AK++K   L G E  ++S E F+V+   +S T      V   GN G+I +L ST
Sbjct: 348 LTHSQTAKIEKFSRLYGHESTQRSFENFKVAHLQNSQTNSVHGIVLLQGNNGWINILHST 407

Query: 544 KTKELIGTLKMNGTVRSLAF----ADNGR---QLLSSGGDGQVYHWDL-RTRTCIHKAVD 603
               L+G  K+ G +            G+    L++    G+V+ +DL +    I +  D
Sbjct: 408 SGLWLMG-CKIEGVITDFCIDYQPISRGKFRTILIAVNAYGEVWEFDLNKNGHVIRRWKD 467

Query: 604 EG-------CINGTALCTSP--------NGALFAAGSDSGIVNIYNRQEFL-GGKKKPLK 663
           +G        + G    T P             A GS+SG VN+Y+R   +      P+ 
Sbjct: 468 QGGVGITKIQVGGGTTTTCPALQISKIKQNRWLAVGSESGFVNLYDRNNAMTSSTPTPVA 527

Query: 664 AIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSCLD 695
           A++ LTT +  L+F+ D QIL + SR  K +L+L+H+PS ++FSNWP     L   + + 
Sbjct: 528 ALDQLTTTISNLQFSPDGQILCMASRAVKDALRLVHLPSCSVFSNWPTSGTPLGKVTSVA 587

[Close]

BLAST of Carg16854 vs. ExPASy TrEMBL
Match: A0A6J1HKC7 (U3 small nucleolar RNA-associated protein 18 homolog OS=Cucurbita moschata OX=3662 GN=LOC111463814 PE=4 SV=1)

HSP 1 Score: 1098.6 bits (2840), Expect = 0.0e+00
Identity = 566/570 (99.30%), Postives = 569/570 (99.82%), Query Frame = 0


Query: 128 MSLISQNVAVISSIEKVTEDNTVVSSSPLRKVDASDVENSGVDTTRAKKRKKEHKKEDEQ 187
           MSLISQNVAVISSIEKVTEDNTVVSSSPLRKVDASDVENSGVDTTRAKKRKKEHKKEDEQ
Sbjct: 1   MSLISQNVAVISSIEKVTEDNTVVSSSPLRKVDASDVENSGVDTTRAKKRKKEHKKEDEQ 60

Query: 188 IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNGFSAEEKDSALYIMDRSANNSLSVYEN 247
           IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNGFSAEEKDSALYIMDRSANNSLSVYEN
Sbjct: 61  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNGFSAEEKDSALYIMDRSANNSLSVYEN 120

Query: 248 DVGLLDESSIKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 307
           DVGLLDESS KEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL
Sbjct: 121 DVGLLDESSNKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 180

Query: 308 RAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYDNVDSIDDILRTNENL 367
           RAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYDNVDSIDDILRTNENL
Sbjct: 181 RAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYDNVDSIDDILRTNENL 240

Query: 368 VAKSGAKLLPGLLEYSRLVDANAQEPANGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 427
           VAKSGAKLLPGLLEYSRLVDANAQEP+NGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK
Sbjct: 241 VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 300

Query: 428 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRRFFYSLDLVKAKVDKIGPLVGREEKSL 487
           RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRR+FFYSLDLVKAKVDKIGPLVGREEKSL
Sbjct: 301 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 360

Query: 488 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADNGRQLLSSGGDG 547
           EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFAD+GRQLLSSGGDG
Sbjct: 361 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDG 420

Query: 548 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 607
           QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP
Sbjct: 421 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 480

Query: 608 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 667
           LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC
Sbjct: 481 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 540

Query: 668 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 698
           LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA
Sbjct: 541 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 570

[Close]

BLAST of Carg16854 vs. ExPASy TrEMBL
Match: A0A6J1HWX2 (U3 small nucleolar RNA-associated protein 18 homolog OS=Cucurbita maxima OX=3661 GN=LOC111466993 PE=4 SV=1)

HSP 1 Score: 1071.2 bits (2769), Expect = 1.8e-309
Identity = 554/570 (97.19%), Postives = 559/570 (98.07%), Query Frame = 0


Query: 128 MSLISQNVAVISSIEKVTEDNTVVSSSPLRKVDASDVENSGVDTTRAKKRKKEHKKEDEQ 187
           MSLISQNVAVISS E V  DNTV SSS LRKVDASDVENSGVDTTR+KKRKKEHKKEDEQ
Sbjct: 1   MSLISQNVAVISSTENVNGDNTVGSSSLLRKVDASDVENSGVDTTRSKKRKKEHKKEDEQ 60

Query: 188 IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNGFSAEEKDSALYIMDRSANNSLSVYEN 247
           IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKN FSAEEK  ALYIMDRSANNSLSVYEN
Sbjct: 61  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSANNSLSVYEN 120

Query: 248 DVGLLDESSIKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 307
           DVGLLDESS KEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL
Sbjct: 121 DVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 180

Query: 308 RAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYDNVDSIDDILRTNENL 367
           RAQHAKLNPGTEWAQLDAQSR GSDDDDDL+SDDENAVALADGYDNVDSIDDILRTNENL
Sbjct: 181 RAQHAKLNPGTEWAQLDAQSRSGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNENL 240

Query: 368 VAKSGAKLLPGLLEYSRLVDANAQEPANGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 427
           VAKSGAKLLPGLLEYSRLVDANAQEP+NGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK
Sbjct: 241 VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 300

Query: 428 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRRFFYSLDLVKAKVDKIGPLVGREEKSL 487
           RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRR+FFYSLDLVKAKVDKIGPLVGREEKSL
Sbjct: 301 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 360

Query: 488 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADNGRQLLSSGGDG 547
           EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFAD+GRQLLSSGGDG
Sbjct: 361 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDG 420

Query: 548 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 607
           QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP
Sbjct: 421 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 480

Query: 608 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 667
           LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC
Sbjct: 481 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 540

Query: 668 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 698
           LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA
Sbjct: 541 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 570

[Close]

BLAST of Carg16854 vs. ExPASy TrEMBL
Match: A0A1S3C7I9 (U3 small nucleolar RNA-associated protein 18 homolog OS=Cucumis melo OX=3656 GN=LOC103497366 PE=4 SV=1)

HSP 1 Score: 1003.4 bits (2593), Expect = 4.5e-289
Identity = 513/570 (90.00%), Postives = 544/570 (95.44%), Query Frame = 0


Query: 128 MSLISQNVAVISSIEKVTEDNTVVSSSPLRKVDASDVENSGVDTTRAKKRKKEHKKEDEQ 187
           MSLISQNVAVISSIEK TE+NT+  SSPLR  DAS+V+ SG+DT+RAKKRKKEH+KEDEQ
Sbjct: 1   MSLISQNVAVISSIEKGTEENTLGPSSPLRNADASEVDKSGLDTSRAKKRKKEHRKEDEQ 60

Query: 188 IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNGFSAEEKDSALYIMDRSANNSLSVYEN 247
           +V+EQQKEM KLENFLFGSLYSPVEFGKDEE+NGF++EEK  ALYIMDRSA+NSLS YE+
Sbjct: 61  LVQEQQKEMMKLENFLFGSLYSPVEFGKDEEQNGFNSEEKIPALYIMDRSADNSLSAYED 120

Query: 248 DVGLLDESSIKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 307
           D  +LDES+ KEE QQRKPVWVDEEEEKA+VNITNVSRLRKLRKEEDE SISGS YVSRL
Sbjct: 121 DYRVLDESTNKEEHQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEDENSISGSVYVSRL 180

Query: 308 RAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYDNVDSIDDILRTNENL 367
           RAQHAKLNPGTEWAQLDAQSRG S DDDD+ SDDENAVALA GYDNVDSIDDILRT+ENL
Sbjct: 181 RAQHAKLNPGTEWAQLDAQSRGDS-DDDDILSDDENAVALAGGYDNVDSIDDILRTSENL 240

Query: 368 VAKSGAKLLPGLLEYSRLVDANAQEPANGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 427
           V KSG KL+PGLL YSRLVDANA+EP+NGPI+SVQFHRN+QLLLATGLDRKLRFFQIDGK
Sbjct: 241 VVKSGGKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGK 300

Query: 428 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRRFFYSLDLVKAKVDKIGPLVGREEKSL 487
           RNTKIQSIFLEDCPIRKASFLPDGSQVII+GRR+FFYSLDLVKAKVDKIGPLVGREEKSL
Sbjct: 301 RNTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 360

Query: 488 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADNGRQLLSSGGDG 547
           E FEVSPDSST+AFIGNEGYILLVS KTKELIGTLKMNG+VRSLAFAD+GRQLLSSGGDG
Sbjct: 361 EAFEVSPDSSTIAFIGNEGYILLVSIKTKELIGTLKMNGSVRSLAFADDGRQLLSSGGDG 420

Query: 548 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 607
           Q+YHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP
Sbjct: 421 QIYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 480

Query: 608 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 667
           LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIH+PSFTIFSNWPPPKKNLQYPSC
Sbjct: 481 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHIPSFTIFSNWPPPKKNLQYPSC 540

Query: 668 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 698
           LDFSPEGGYMAVGNAAGKVLLYKLHHY HA
Sbjct: 541 LDFSPEGGYMAVGNAAGKVLLYKLHHYHHA 569

[Close]

BLAST of Carg16854 vs. ExPASy TrEMBL
Match: A0A6J1ET16 (U3 small nucleolar RNA-associated protein 18 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437464 PE=4 SV=1)

HSP 1 Score: 994.2 bits (2569), Expect = 2.8e-286
Identity = 512/571 (89.67%), Postives = 538/571 (94.22%), Query Frame = 0


Query: 128 MSLISQNVAVISSIEKVTEDNTVVSSSPLRKVDASDVENSGVDTTRAKKRKKEHKKEDEQ 187
           MSLISQ+VA IS++EKVT +  V SSSPLR +DASDVE SG DTTR KKRKKEHKKED Q
Sbjct: 1   MSLISQSVAAISNLEKVTGETIVGSSSPLRNLDASDVEMSGADTTRPKKRKKEHKKEDAQ 60

Query: 188 IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNGFSAEEKDS-ALYIMDRSANNSLSVYE 247
           +VKEQQ+EM+ LENFLFGSLYSPVEFGK EE NG S EEK++ ALYIMDRSAN+SLS YE
Sbjct: 61  LVKEQQQEMKNLENFLFGSLYSPVEFGKHEEVNGLSGEEKEAPALYIMDRSANSSLSAYE 120

Query: 248 NDVGLLDESSIKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSR 307
            D GLLDES  +EE QQRKPVW+DEEEEKA+VNITNVSRLRKLRKEEDEKSISGSEYVSR
Sbjct: 121 GDFGLLDESVNEEEPQQRKPVWIDEEEEKATVNITNVSRLRKLRKEEDEKSISGSEYVSR 180

Query: 308 LRAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYDNVDSIDDILRTNEN 367
           LRAQHAKLNP TEWAQLD Q+RGGS DDDDL+SDDENAV +ADGYD+VDSIDDILRT++N
Sbjct: 181 LRAQHAKLNPSTEWAQLDVQTRGGS-DDDDLSSDDENAVVMADGYDDVDSIDDILRTSDN 240

Query: 368 LVAKSGAKLLPGLLEYSRLVDANAQEPANGPIHSVQFHRNAQLLLATGLDRKLRFFQIDG 427
           LV KSG KLLPGLLEYSRLVDANA+EP+NGPIHSVQFHRNAQLLLATGLDR+LRFFQIDG
Sbjct: 241 LVEKSGGKLLPGLLEYSRLVDANAEEPSNGPIHSVQFHRNAQLLLATGLDRRLRFFQIDG 300

Query: 428 KRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRRFFYSLDLVKAKVDKIGPLVGREEKS 487
           KRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRRFFYS DLVKAKVDKIGPLVGREEKS
Sbjct: 301 KRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRRFFYSFDLVKAKVDKIGPLVGREEKS 360

Query: 488 LEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADNGRQLLSSGGD 547
           LEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAF DNGRQLLSSGGD
Sbjct: 361 LEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFTDNGRQLLSSGGD 420

Query: 548 GQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKK 607
           GQVYHWDLRTRTCIHK VDEGCINGTAL TSPNGALFAAGSDSGIVNIYNR+EFLGGKKK
Sbjct: 421 GQVYHWDLRTRTCIHKGVDEGCINGTALGTSPNGALFAAGSDSGIVNIYNREEFLGGKKK 480

Query: 608 PLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPS 667
           PLKAIENLTTKV+FLKFNHDAQILAICSRMKKSSLKLIHVPSFT FSNWPPPKKNLQYPS
Sbjct: 481 PLKAIENLTTKVEFLKFNHDAQILAICSRMKKSSLKLIHVPSFTTFSNWPPPKKNLQYPS 540

Query: 668 CLDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 698
           CLDFSPEGGYMAVGNAAGKVLLYKLHHY+HA
Sbjct: 541 CLDFSPEGGYMAVGNAAGKVLLYKLHHYRHA 570

[Close]

BLAST of Carg16854 vs. ExPASy TrEMBL
Match: A0A6J1K5W3 (U3 small nucleolar RNA-associated protein 18 homolog OS=Cucurbita maxima OX=3661 GN=LOC111490998 PE=4 SV=1)

HSP 1 Score: 990.3 bits (2559), Expect = 4.0e-285
Identity = 510/571 (89.32%), Postives = 537/571 (94.05%), Query Frame = 0


Query: 128 MSLISQNVAVISSIEKVTEDNTVVSSSPLRKVDASDVENSGVDTTRAKKRKKEHKKEDEQ 187
           MSLISQNVA ISS+EKVT +  V SSSPLR +DASDVE SG DTTR KKRKKEHKKED Q
Sbjct: 1   MSLISQNVAAISSLEKVTGETIVASSSPLRNLDASDVEISGADTTRPKKRKKEHKKEDAQ 60

Query: 188 IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNGFSAEEKDS-ALYIMDRSANNSLSVYE 247
           +VKEQQ++M+KLENFLFGSLYSP EFGK EE NG S EEK++ ALYIMDRSAN+SLS YE
Sbjct: 61  LVKEQQQKMKKLENFLFGSLYSPAEFGKHEEVNGLSGEEKEAPALYIMDRSANSSLSAYE 120

Query: 248 NDVGLLDESSIKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSR 307
            D GLLDES  +EE QQRKPVW+DEEEEKA+VNITNVSRLRKLRKEEDEKSISGSEYVSR
Sbjct: 121 GDFGLLDESVNEEEPQQRKPVWIDEEEEKATVNITNVSRLRKLRKEEDEKSISGSEYVSR 180

Query: 308 LRAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYDNVDSIDDILRTNEN 367
           LRAQHAKLNP TEWAQLD Q+ GGS DDDDL+SDDENAV +ADG+D+VDSIDDILRT++N
Sbjct: 181 LRAQHAKLNPSTEWAQLDVQTSGGS-DDDDLSSDDENAVVMADGHDDVDSIDDILRTSDN 240

Query: 368 LVAKSGAKLLPGLLEYSRLVDANAQEPANGPIHSVQFHRNAQLLLATGLDRKLRFFQIDG 427
           LV KSG KLLPGLLEYSRLVDANA+EP+NGPIHSVQFHRNAQLLLATGLDR+LRFFQIDG
Sbjct: 241 LVEKSGGKLLPGLLEYSRLVDANAEEPSNGPIHSVQFHRNAQLLLATGLDRRLRFFQIDG 300

Query: 428 KRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRRFFYSLDLVKAKVDKIGPLVGREEKS 487
           KRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRRFFYSLDLVKAKVDKIGPLVGREEKS
Sbjct: 301 KRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRRFFYSLDLVKAKVDKIGPLVGREEKS 360

Query: 488 LEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADNGRQLLSSGGD 547
           LEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAF DNG QLLSSGGD
Sbjct: 361 LEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFTDNGFQLLSSGGD 420

Query: 548 GQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKK 607
           GQVYHWDLRTRTCIHK VDEGCINGTAL TSPNGALFAAGSDSGIVNIYNR+EFLGGKKK
Sbjct: 421 GQVYHWDLRTRTCIHKGVDEGCINGTALGTSPNGALFAAGSDSGIVNIYNREEFLGGKKK 480

Query: 608 PLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPS 667
           P+KAIENLTTKV+FLKFNHDAQILAICSRMKKSSLKLIHVPSFT FSNWPPPKKNLQYPS
Sbjct: 481 PMKAIENLTTKVEFLKFNHDAQILAICSRMKKSSLKLIHVPSFTTFSNWPPPKKNLQYPS 540

Query: 668 CLDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 698
           CLDFSPEGGYMAVGNAAGKVLLYKLHHY+HA
Sbjct: 541 CLDFSPEGGYMAVGNAAGKVLLYKLHHYRHA 570

[Close]

BLAST of Carg16854 vs. TAIR 10
Match: AT5G14050.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 672.9 bits (1735), Expect = 2.7e-193
Identity = 353/546 (64.65%), Postives = 427/546 (78.21%), Query Frame = 0


Query: 160 DASDVENSGV--DTTRAKKRKKEHKKEDEQIVKEQQKEMEKLENFLFGSLYSPVEFGKDE 219
           D  D E  G   D TR K+RK E  KE +++ + +  EM+KLEN +FGSLYSPV FGK+E
Sbjct: 24  DVEDEEEIGSDDDLTRGKRRKTE--KEKQKLEESELVEMKKLENLIFGSLYSPVTFGKEE 83

Query: 220 EKNGFSAEEKDSALYIMDRSANNSLSVYENDVGLLDESSIKEEAQ-----QRKPVWVDEE 279
           E++G       SAL+ +DRSA   +  YE+D    +E S +E  Q     + +  W DEE
Sbjct: 84  EEDG-------SALFHVDRSAVRQIPDYEDDGDDDEELSDEENGQVVAIRKGEAAWEDEE 143

Query: 280 EEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGSD 339
           E++ +V+I +V+RLRKLRKEE+E  ISGSEY++RLRA HAKLNPGT+WA+ D+Q   G  
Sbjct: 144 EKQINVDIASVNRLRKLRKEENEGLISGSEYIARLRAHHAKLNPGTDWARPDSQIVDGES 203

Query: 340 DDDDLTSDDENAVALADGYDNVDSIDDILRTNENLVAKS-GAKLLPGLLEYSRLVDANAQ 399
            DDD T D                +DDILRTNE+LV KS G KL  G LEYS+LVDANA 
Sbjct: 204 SDDDDTQD--------------GGVDDILRTNEDLVVKSRGNKLCAGRLEYSKLVDANAA 263

Query: 400 EPANGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDG 459
           +P+NGPI+SV FH+NAQLLL  GLDR+LRFFQIDGKRNTKIQSIFLEDCPIRKA+FLP+G
Sbjct: 264 DPSNGPINSVHFHQNAQLLLTAGLDRRLRFFQIDGKRNTKIQSIFLEDCPIRKAAFLPNG 323

Query: 460 SQVIISGRRRFFYSLDLVKAKVDKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLV 519
           SQVI+SGRR+FFYS DL KAK DKIGPLVGREEKSLE FEVS DS+T+AF+GNEGYILLV
Sbjct: 324 SQVIVSGRRKFFYSFDLEKAKFDKIGPLVGREEKSLEYFEVSQDSNTIAFVGNEGYILLV 383

Query: 520 STKTKELIGTLKMNGTVRSLAFADNGRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCING 579
           STKTKELIGTLKMNG+VRSLAF+++G+ LLSSGGDGQVY WDLRT  C++K VDEG   G
Sbjct: 384 STKTKELIGTLKMNGSVRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVDEGSTCG 443

Query: 580 TALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKPLKAIENLTTKVDFLKFNHDAQILA 639
           T+LC+S NGALFA+G+D GIVNIY + EF+GGK+KP+K ++NLT+K+DF+KFNHDAQILA
Sbjct: 444 TSLCSSLNGALFASGTDRGIVNIYKKSEFVGGKRKPIKTVDNLTSKIDFMKFNHDAQILA 503

Query: 640 ICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSCLDFSPEGGYMAVGNAAGKVLLYKL 698
           I S M K+S+KL+HVPS T+FSNWPPP   + YP CLDFSP  G+MA+GNAAGKVLLYKL
Sbjct: 504 IVSTMNKNSVKLVHVPSLTVFSNWPPPNSTMHYPRCLDFSPGSGFMAMGNAAGKVLLYKL 546

[Close]

BLAST of Carg16854 vs. TAIR 10
Match: AT4G14550.1 (indole-3-acetic acid inducible 14 )

HSP 1 Score: 113.2 bits (282), Expect = 8.3e-25
Identity = 72/164 (43.90%), Postives = 86/164 (52.44%), Query Frame = 0


Query: 1   MSFEETELRLGLPGNN------VRSEVRRKRGF----------------HEESGTNHKP- 60
           M+ +ETEL LGLPG         +S V  KRGF                H +  TN  P 
Sbjct: 1   MNLKETELCLGLPGGTETVESPAKSGVGNKRGFSETVDLKLNLQSNKQGHVDLNTNGAPK 60

Query: 61  ----------PLPKAQVVGWPPIRSYRKNSLALRKGSNEEVVLISRNKNGNTGAARFVKV 120
                     P  KAQVVGWPP+R+YRKN +A +K    E  + S       G   FVKV
Sbjct: 61  EKTFLKDPSKPPAKAQVVGWPPVRNYRKNVMANQKSGEAEEAMSS-----GGGTVAFVKV 120

Query: 121 SLDGAPYLRKVDLTMYNSYKQLSHALAKFFGAFTIGAEWKMSLI 132
           S+DGAPYLRKVDL MY SYK LS ALAK F +FT+G+     +I
Sbjct: 121 SMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQGMI 159

[Close]

BLAST of Carg16854 vs. TAIR 10
Match: AT3G04730.1 (indoleacetic acid-induced protein 16 )

HSP 1 Score: 104.8 bits (260), Expect = 2.9e-22
Identity = 67/159 (42.14%), Postives = 90/159 (56.60%), Query Frame = 0


Query: 1   MSFEETELRLGLPGNNVRSEV----RRKRGFHEE-------SGTNH-------------- 60
           ++FE TELRLGLPG N   E+      KRGF E        S T                
Sbjct: 2   INFEATELRLGLPGGNHGGEMAGKNNGKRGFSETVDLKLNLSSTAMDSVSKVDLENMKEK 61

Query: 61  --KPPLPKAQVVGWPPIRSYRKNSLALRKGSNEEVVLISRNKNGNTGA---------ARF 120
             KPP  KAQVVGWPP+RS+RKN ++ +K +  +    +   +G++GA           +
Sbjct: 62  VVKPP-AKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVAY 121

Query: 121 VKVSLDGAPYLRKVDLTMYNSYKQLSHALAKFFGAFTIG 124
           VKVS+DGAPYLRK+DL +Y +Y+ LS+AL+K F +FTIG
Sbjct: 122 VKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIG 159

[Close]

BLAST of Carg16854 vs. TAIR 10
Match: AT1G04250.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 104.0 bits (258), Expect = 5.0e-22
Identity = 67/157 (42.68%), Postives = 83/157 (52.87%), Query Frame = 0


Query: 1   MSFEETELRLGLPGNNVRSEVR-RKRGFHE---------------ESGTNH--------- 60
           ++  ETEL LGLPG +  + V   KRGF E               E  T H         
Sbjct: 7   LNLRETELCLGLPGGDTVAPVTGNKRGFSETVDLKLNLNNEPANKEGSTTHDVVTFDSKE 66

Query: 61  ---------KPPLPKAQVVGWPPIRSYRKNSLALRKGSNEEVVLISRNKNGNTGAARFVK 120
                    KPP  KAQVVGWPP+RSYRKN           V++  +  +G   AA FVK
Sbjct: 67  KSACPKDPAKPP-AKAQVVGWPPVRSYRKN-----------VMVSCQKSSGGPEAAAFVK 126

Query: 121 VSLDGAPYLRKVDLTMYNSYKQLSHALAKFFGAFTIG 124
           VS+DGAPYLRK+DL MY SY +LS+AL+  F +FT+G
Sbjct: 127 VSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMG 151

[Close]

BLAST of Carg16854 vs. TAIR 10
Match: AT3G23050.2 (indole-3-acetic acid 7 )

HSP 1 Score: 104.0 bits (258), Expect = 5.0e-22
Identity = 69/160 (43.12%), Postives = 83/160 (51.88%), Query Frame = 0


Query: 1   MSFEETELRLGLPG------NNVRSEVRRKRGFHE------------------------- 60
           M+ + TEL LGLPG      +  +S V  KRGF E                         
Sbjct: 6   MNLKATELCLGLPGGAEAVESPAKSAVGSKRGFSETVDLMLNLQSNKEGSVDLKNVSAVP 65

Query: 61  -ESGTNHKPPLP--KAQVVGWPPIRSYRKNSLALRK---GSNEEVVLISRNKNGNTGAAR 120
            E  T   P  P  KAQVVGWPP+R+YRKN +  +K   G+ E     + N  G    A 
Sbjct: 66  KEKTTLKDPSKPPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFGGGAAGAG 125

Query: 121 FVKVSLDGAPYLRKVDLTMYNSYKQLSHALAKFFGAFTIG 124
            VKVS+DGAPYLRKVDL MY SY+ LS ALAK F +FT+G
Sbjct: 126 LVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMG 165

The following BLAST results are available for this feature:

BLAST of Carg16854 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7011246.1	0.0e+00	100.00	U3 small nucleolar RNA-associated protein 18-like protein, partial [Cucurbita ar...	[more]
KAG6571483.1	0.0e+00	90.32	U3 small nucleolar RNA-associated protein 18-like protein, partial [Cucurbita ar...	[more]
XP_022963504.1	0.0e+00	99.30	U3 small nucleolar RNA-associated protein 18 homolog [Cucurbita moschata]	[more]
XP_023511721.1	5.4e-310	97.37	U3 small nucleolar RNA-associated protein 18 homolog [Cucurbita pepo subsp. pepo...	[more]
XP_022967509.1	3.7e-309	97.19	U3 small nucleolar RNA-associated protein 18 homolog [Cucurbita maxima]	[more]

BLAST of Carg16854 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMU5	3.8e-192	64.65	U3 small nucleolar RNA-associated protein 18 homolog OS=Arabidopsis thaliana OX=...	[more]
Q9Y5J1	3.9e-80	40.04	U3 small nucleolar RNA-associated protein 18 homolog OS=Homo sapiens OX=9606 GN=...	[more]
Q5SSI6	9.1e-77	34.17	U3 small nucleolar RNA-associated protein 18 homolog OS=Mus musculus OX=10090 GN...	[more]
P78750	5.1e-72	32.45	Probable U3 small nucleolar RNA-associated protein 18 OS=Schizosaccharomyces pom...	[more]
P40362	2.2e-54	31.86	U3 small nucleolar RNA-associated protein 18 OS=Saccharomyces cerevisiae (strain...	[more]

BLAST of Carg16854 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HKC7	0.0e+00	99.30	U3 small nucleolar RNA-associated protein 18 homolog OS=Cucurbita moschata OX=36...	[more]
A0A6J1HWX2	1.8e-309	97.19	U3 small nucleolar RNA-associated protein 18 homolog OS=Cucurbita maxima OX=3661...	[more]
A0A1S3C7I9	4.5e-289	90.00	U3 small nucleolar RNA-associated protein 18 homolog OS=Cucumis melo OX=3656 GN=...	[more]
A0A6J1ET16	2.8e-286	89.67	U3 small nucleolar RNA-associated protein 18 homolog isoform X1 OS=Cucurbita mos...	[more]
A0A6J1K5W3	4.0e-285	89.32	U3 small nucleolar RNA-associated protein 18 homolog OS=Cucurbita maxima OX=3661...	[more]

BLAST of Carg16854 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14050.1	2.7e-193	64.65	Transducin/WD40 repeat-like superfamily protein	[more]
AT4G14550.1	8.3e-25	43.90	indole-3-acetic acid inducible 14	[more]
AT3G04730.1	2.9e-22	42.14	indoleacetic acid-induced protein 16	[more]
AT1G04250.1	5.0e-22	42.68	AUX/IAA transcriptional regulator family protein	[more]
AT3G23050.2	5.0e-22	43.13	indole-3-acetic acid 7	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 175..202
None	No IPR available	GENE3D	3.10.20.90		coord: 77..182 e-value: 1.5E-12 score: 49.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 315..340
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..185
None	No IPR available	PANTHER	PTHR18359:SF0	U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 18 HOMOLOG	coord: 172..696
None	No IPR available	PANTHER	PTHR18359	WD-REPEAT PROTEIN-RELATED	coord: 172..696
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 521..556 score: 8.887423
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 556..596 e-value: 1.7 score: 15.5 coord: 384..423 e-value: 7.9 score: 11.3 coord: 648..690 e-value: 17.0 score: 9.2 coord: 515..553 e-value: 2.3E-6 score: 37.1
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 519..553 e-value: 0.017 score: 16.0 coord: 569..596 e-value: 0.04 score: 14.8
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 521..562 score: 11.410742
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 373..692 e-value: 2.4E-106 score: 357.8
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 30..125 e-value: 2.9E-32 score: 112.5
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 394..691

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16854-RA	Carg16854-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0034388	Pwp2p-containing subcomplex of 90S preribosome
cellular_component	GO:0032040	small-subunit processome
molecular_function	GO:0005515	protein binding