Carg16838 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16838
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	mavicyanin
Location	Carg_Chr19: 214048 .. 214907 (+)
RNA-Seq Expression	Carg16838
Synteny	Carg16838

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTGGGCGCTGCTGTGGATCTGCACAATGGGGCTGTTTACACTGTCGGCGGCGGCTACGGTCCACAAAGTCGGCGACTCTACTGGCTGGACCACTCTCGTCCCCTACGATTATGCTAAGTGGGCTTCTTCCAACAAATTCCATGTCGGCGACTCCCTCTGTAAGCTCCTCTCCCTAATTTCTTTACTTTCGCTGTGAATTTGAGTTCTGTGGGTCGAGCGTCGGAGGATCGTTGAAAAGAGTTCTGCATTGGTTAATTTAGGAAATGATTACTACATCTATTTTGATACAAATGTTTTTAGAAAACCGAAAGCAAAGCCACGGAATCTTAGATGTACCTTTAACTTAGCTATGTGTCCTGATTTCTAACGTGGTACTAGAGTCGTGCCCTTATTAACTTAGCTATGTATACGATTTACAAGTAAGGAATACGTCCGTAAGAGGTTAATTTGGGAACTGCAGTGTTCAACTACAACAACAAGTTCCACAATGTCTTGCAAGTGGACCAAGAGCAGTTTAAGTCCTGCAACTCATCTTCTCCGGCGGCGTCGTACACCTCCGGCGCAGACTCCATCCCTTTGAAGAGGCCTGGAACGTTCTACTTCCTGTGTGGCATCCCGGGGCACTGTCAATTGGGTCAGAAGGTGGAAATCAAGGTCGACCCAGGTTCATCCTCCGCGCTGCTAGCTCCGTCGTCAGCCCCAGGTCAAAGCCCACTCCCCAATGGGCCTGCGCCACTGGGCACACCCTCGGCTCTTGCTCCGCCGCCTAGCGCTGCCTCCACTCTCTCTTATTACTCGCTGCTCTGCCTCCCTCTGGCTGCTTATGTCGTTGCCTTCTACTCTCTGTGTGTTTGA

mRNA sequence

ATGGGTTGGGCGCTGCTGTGGATCTGCACAATGGGGCTGTTTACACTGTCGGCGGCGGCTACGGTCCACAAAGTCGGCGACTCTACTGGCTGGACCACTCTCGTCCCCTACGATTATGCTAAGTGGGCTTCTTCCAACAAATTCCATGTCGGCGACTCCCTCTTGTTCAACTACAACAACAAGTTCCACAATGTCTTGCAAGTGGACCAAGAGCAGTTTAAGTCCTGCAACTCATCTTCTCCGGCGGCGTCGTACACCTCCGGCGCAGACTCCATCCCTTTGAAGAGGCCTGGAACGTTCTACTTCCTGTGTGGCATCCCGGGGCACTGTCAATTGGGTCAGAAGGTGGAAATCAAGGTCGACCCAGGTTCATCCTCCGCGCTGCTAGCTCCGTCGTCAGCCCCAGGTCAAAGCCCACTCCCCAATGGGCCTGCGCCACTGGGCACACCCTCGGCTCTTGCTCCGCCGCCTAGCGCTGCCTCCACTCTCTCTTATTACTCGCTGCTCTGCCTCCCTCTGGCTGCTTATGTCGTTGCCTTCTACTCTCTGTGTGTTTGA

Coding sequence (CDS)

ATGGGTTGGGCGCTGCTGTGGATCTGCACAATGGGGCTGTTTACACTGTCGGCGGCGGCTACGGTCCACAAAGTCGGCGACTCTACTGGCTGGACCACTCTCGTCCCCTACGATTATGCTAAGTGGGCTTCTTCCAACAAATTCCATGTCGGCGACTCCCTCTTGTTCAACTACAACAACAAGTTCCACAATGTCTTGCAAGTGGACCAAGAGCAGTTTAAGTCCTGCAACTCATCTTCTCCGGCGGCGTCGTACACCTCCGGCGCAGACTCCATCCCTTTGAAGAGGCCTGGAACGTTCTACTTCCTGTGTGGCATCCCGGGGCACTGTCAATTGGGTCAGAAGGTGGAAATCAAGGTCGACCCAGGTTCATCCTCCGCGCTGCTAGCTCCGTCGTCAGCCCCAGGTCAAAGCCCACTCCCCAATGGGCCTGCGCCACTGGGCACACCCTCGGCTCTTGCTCCGCCGCCTAGCGCTGCCTCCACTCTCTCTTATTACTCGCTGCTCTGCCTCCCTCTGGCTGCTTATGTCGTTGCCTTCTACTCTCTGTGTGTTTGA

Protein sequence

MGWALLWICTMGLFTLSAAATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDPGSSSALLAPSSAPGQSPLPNGPAPLGTPSALAPPPSAASTLSYYSLLCLPLAAYVVAFYSLCV

Homology

[Close]

BLAST of Carg16838 vs. NCBI nr
Match: KAG6571468.1 (hypothetical protein SDJN03_28196, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 370.9 bits (951), Expect = 6.3e-99
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MGWALLWICTMGLFTLSAAATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNN 60
           MGWALLWICTMGLFTLSAAATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNN
Sbjct: 7   MGWALLWICTMGLFTLSAAATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNN 66

Query: 61  KFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV 120
           KFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV
Sbjct: 67  KFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV 126

Query: 121 DPGSSSALLAPSSAPGQSPLPNGPAPLGTPSALAPPPSAASTLSYYSLLCLPLAAYVVAF 180
           DPGSSSALLAPSSAPGQSPLPNGPAPLGTPSALAPPPSAASTLSYYSLLCLPLAAYVVAF
Sbjct: 127 DPGSSSALLAPSSAPGQSPLPNGPAPLGTPSALAPPPSAASTLSYYSLLCLPLAAYVVAF 186

Query: 181 YSLCV 186
           YSLCV
Sbjct: 187 YSLCV 191

[Close]

BLAST of Carg16838 vs. NCBI nr
Match: KAG7011230.1 (hypothetical protein SDJN02_26133, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 370.9 bits (951), Expect = 6.3e-99
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MGWALLWICTMGLFTLSAAATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNN 60
           MGWALLWICTMGLFTLSAAATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNN
Sbjct: 1   MGWALLWICTMGLFTLSAAATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNN 60

Query: 61  KFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV 120
           KFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV
Sbjct: 61  KFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV 120

Query: 121 DPGSSSALLAPSSAPGQSPLPNGPAPLGTPSALAPPPSAASTLSYYSLLCLPLAAYVVAF 180
           DPGSSSALLAPSSAPGQSPLPNGPAPLGTPSALAPPPSAASTLSYYSLLCLPLAAYVVAF
Sbjct: 121 DPGSSSALLAPSSAPGQSPLPNGPAPLGTPSALAPPPSAASTLSYYSLLCLPLAAYVVAF 180

Query: 181 YSLCV 186
           YSLCV
Sbjct: 181 YSLCV 185

[Close]

BLAST of Carg16838 vs. NCBI nr
Match: XP_023553590.1 (mavicyanin [Cucurbita pepo subsp. pepo])

HSP 1 Score: 365.5 bits (937), Expect = 2.6e-97
Identity = 182/185 (98.38%), Postives = 183/185 (98.92%), Query Frame = 0


Query: 1   MGWALLWICTMGLFTLSAAATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNN 60
           MGWALLWIC MGLFTLSAAATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNN
Sbjct: 7   MGWALLWICAMGLFTLSAAATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNN 66

Query: 61  KFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV 120
           KFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV
Sbjct: 67  KFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV 126

Query: 121 DPGSSSALLAPSSAPGQSPLPNGPAPLGTPSALAPPPSAASTLSYYSLLCLPLAAYVVAF 180
           DPGSSSALLAPSSAP QSPLPNGPAPLGTPSALAPPPSAAST+SYYSLLCLPLAAYVVAF
Sbjct: 127 DPGSSSALLAPSSAPSQSPLPNGPAPLGTPSALAPPPSAASTVSYYSLLCLPLAAYVVAF 186

Query: 181 YSLCV 186
           YSLCV
Sbjct: 187 YSLCV 191

[Close]

BLAST of Carg16838 vs. NCBI nr
Match: XP_022963846.1 (mavicyanin [Cucurbita moschata])

HSP 1 Score: 365.2 bits (936), Expect = 3.4e-97
Identity = 183/185 (98.92%), Postives = 184/185 (99.46%), Query Frame = 0


Query: 1   MGWALLWICTMGLFTLSAAATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNN 60
           MGWALLWI TMGLFTLSAAATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNY+N
Sbjct: 7   MGWALLWISTMGLFTLSAAATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYHN 66

Query: 61  KFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV 120
           KFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV
Sbjct: 67  KFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV 126

Query: 121 DPGSSSALLAPSSAPGQSPLPNGPAPLGTPSALAPPPSAASTLSYYSLLCLPLAAYVVAF 180
           DPGSSSALLAPSSAPGQSPLPNGPAPLGTPSALAPPPSAASTLSYYSLLCLPLAAYVVAF
Sbjct: 127 DPGSSSALLAPSSAPGQSPLPNGPAPLGTPSALAPPPSAASTLSYYSLLCLPLAAYVVAF 186

Query: 181 YSLCV 186
           YSLCV
Sbjct: 187 YSLCV 191

[Close]

BLAST of Carg16838 vs. NCBI nr
Match: XP_022967382.1 (mavicyanin [Cucurbita maxima])

HSP 1 Score: 352.1 bits (902), Expect = 3.0e-93
Identity = 175/185 (94.59%), Postives = 179/185 (96.76%), Query Frame = 0


Query: 1   MGWALLWICTMGLFTLSAAATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNN 60
           +GW LLWICTMGLFT+SA ATVHKVGDSTGWTTLVP+DYAKWASSNKF VGDSLLFNYNN
Sbjct: 7   VGWPLLWICTMGLFTVSAVATVHKVGDSTGWTTLVPFDYAKWASSNKFRVGDSLLFNYNN 66

Query: 61  KFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV 120
           KFHNVLQVDQEQFKSCNSSSPAASYTSGADSI LKRPGTFYFLCGIPGHCQLGQKVEIKV
Sbjct: 67  KFHNVLQVDQEQFKSCNSSSPAASYTSGADSITLKRPGTFYFLCGIPGHCQLGQKVEIKV 126

Query: 121 DPGSSSALLAPSSAPGQSPLPNGPAPLGTPSALAPPPSAASTLSYYSLLCLPLAAYVVAF 180
           DPGSSSALLAPSSAP QSPLPNGPAPLGTPSALAPPPSAASTLSYYSLLCLPLAAY VAF
Sbjct: 127 DPGSSSALLAPSSAPSQSPLPNGPAPLGTPSALAPPPSAASTLSYYSLLCLPLAAYAVAF 186

Query: 181 YSLCV 186
           YS+CV
Sbjct: 187 YSVCV 191

[Close]

BLAST of Carg16838 vs. ExPASy Swiss-Prot
Match: P80728 (Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 2.3e-59
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 20  ATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSS 79
           ATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSS
Sbjct: 1   ATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSS 60

Query: 80  SPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDPGSSSA 128
           SPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDPGSSSA
Sbjct: 61  SPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDPGSSSA 108

[Close]

BLAST of Carg16838 vs. ExPASy Swiss-Prot
Match: P00302 (Stellacyanin OS=Toxicodendron vernicifluum OX=4013 PE=1 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.8e-24
Identity = 53/104 (50.96%), Postives = 71/104 (68.27%), Query Frame = 0


Query: 21  TVHKVGDSTGWTTL----VPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSC 80
           TV+ VGDS GW       V YD+ KWAS+  FH+GD L+F Y+ +FHNV +V Q+ ++SC
Sbjct: 1   TVYTVGDSAGWKVPFFGDVDYDW-KWASNKTFHIGDVLVFKYDRRFHNVDKVTQKNYQSC 60

Query: 81  NSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV 121
           N ++P ASY +G + I LK  G  Y++CG+P HC LGQKV I V
Sbjct: 61  NDTTPIASYNTGBBRINLKTVGQKYYICGVPKHCDLGQKVHINV 103

[Close]

BLAST of Carg16838 vs. ExPASy Swiss-Prot
Match: Q41001 (Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.8e-22
Identity = 66/158 (41.77%), Postives = 94/158 (59.49%), Query Frame = 0


Query: 5   LLWICTMGLFTLSAAATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHN 64
           LL I  M L +L   ATV+ VGD++GW  ++  DY+ WAS   F VGDSL+FNY    H 
Sbjct: 12  LLAIINMALPSL---ATVYTVGDTSGW--VIGGDYSTWASDKTFAVGDSLVFNYGAGAHT 71

Query: 65  VLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDPGS 124
           V +V +  +KSC S +  ++ ++GA +IPLK+ G  YF+CG+PGH   G K+ IKV   S
Sbjct: 72  VDEVKESDYKSCTSGNSISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSIKVKASS 131

Query: 125 SSALLAPSSAPGQSPLPNGPAPLGTPSALAPPPSAAST 163
            S     S+AP  +P  +G    G+PS+   P +  +T
Sbjct: 132 GS-----SAAPSATPSSSGK---GSPSSDDTPAATTTT 156

[Close]

BLAST of Carg16838 vs. ExPASy Swiss-Prot
Match: O82081 (Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.2e-21
Identity = 59/158 (37.34%), Postives = 86/158 (54.43%), Query Frame = 0


Query: 20  ATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSS 79
           AT H +G  +GWT  V      WA+   F VGD+L+F+Y   FH+V++V + +F SC + 
Sbjct: 23  ATDHTIGGPSGWT--VGASLRTWAAGQTFAVGDNLVFSYPAAFHDVVEVTKPEFDSCQAV 82

Query: 80  SPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDPGSSSALLAP-------- 139
            P  ++ +G   +PL  PG  YF+CG+PGHC  G K+E+ V P ++ A  AP        
Sbjct: 83  KPLITFANGNSLVPLTTPGKRYFICGMPGHCSQGMKLEVNVVPTATVAPTAPLPNTVPSL 142

Query: 140 ------SSAPGQSPLPNGPAPLGTPSALAPPPSAASTL 164
                 S  P Q  LP  P P+ +PS+  P PS++  L
Sbjct: 143 NAPSPSSVLPIQPLLPLNPVPVLSPSSSTPLPSSSLPL 178

[Close]

BLAST of Carg16838 vs. ExPASy Swiss-Prot
Match: A0A0M4FTF3 (Blue copper protein OS=Petunia hybrida OX=4102 GN=BCP PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.3e-18
Identity = 50/122 (40.98%), Postives = 69/122 (56.56%), Query Frame = 0


Query: 18  AAATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCN 77
           A  T + VGD  GWT  +  DY  WA    F VGD+L+F Y    HNV +V+Q  F++C 
Sbjct: 113 APQTEYWVGDDKGWT--IDVDYQAWAKGKTFKVGDTLVFKYTKGHHNVFKVNQTGFQNCI 172

Query: 78  SSSPAASYTSGADSIPLKRPGTFYFLCGIPGHC-QLGQKVEIKVD--PGSSSALLAPSSA 137
           +  P+   TSG D I L  PG  +++CG P HC +  QK+ I V+  P  +  + AP+ A
Sbjct: 173 APPPSEGLTSGHDVITLAAPGKKWYICGFPTHCSEHKQKLAITVEGAPAQTPPVWAPAPA 232

[Close]

BLAST of Carg16838 vs. ExPASy TrEMBL
Match: A0A6J1HH72 (mavicyanin OS=Cucurbita moschata OX=3662 GN=LOC111464034 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 1.7e-97
Identity = 183/185 (98.92%), Postives = 184/185 (99.46%), Query Frame = 0


Query: 1   MGWALLWICTMGLFTLSAAATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNN 60
           MGWALLWI TMGLFTLSAAATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNY+N
Sbjct: 7   MGWALLWISTMGLFTLSAAATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYHN 66

Query: 61  KFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV 120
           KFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV
Sbjct: 67  KFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV 126

Query: 121 DPGSSSALLAPSSAPGQSPLPNGPAPLGTPSALAPPPSAASTLSYYSLLCLPLAAYVVAF 180
           DPGSSSALLAPSSAPGQSPLPNGPAPLGTPSALAPPPSAASTLSYYSLLCLPLAAYVVAF
Sbjct: 127 DPGSSSALLAPSSAPGQSPLPNGPAPLGTPSALAPPPSAASTLSYYSLLCLPLAAYVVAF 186

Query: 181 YSLCV 186
           YSLCV
Sbjct: 187 YSLCV 191

[Close]

BLAST of Carg16838 vs. ExPASy TrEMBL
Match: A0A6J1HQP3 (mavicyanin OS=Cucurbita maxima OX=3661 GN=LOC111466927 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.5e-93
Identity = 175/185 (94.59%), Postives = 179/185 (96.76%), Query Frame = 0


Query: 1   MGWALLWICTMGLFTLSAAATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNN 60
           +GW LLWICTMGLFT+SA ATVHKVGDSTGWTTLVP+DYAKWASSNKF VGDSLLFNYNN
Sbjct: 7   VGWPLLWICTMGLFTVSAVATVHKVGDSTGWTTLVPFDYAKWASSNKFRVGDSLLFNYNN 66

Query: 61  KFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV 120
           KFHNVLQVDQEQFKSCNSSSPAASYTSGADSI LKRPGTFYFLCGIPGHCQLGQKVEIKV
Sbjct: 67  KFHNVLQVDQEQFKSCNSSSPAASYTSGADSITLKRPGTFYFLCGIPGHCQLGQKVEIKV 126

Query: 121 DPGSSSALLAPSSAPGQSPLPNGPAPLGTPSALAPPPSAASTLSYYSLLCLPLAAYVVAF 180
           DPGSSSALLAPSSAP QSPLPNGPAPLGTPSALAPPPSAASTLSYYSLLCLPLAAY VAF
Sbjct: 127 DPGSSSALLAPSSAPSQSPLPNGPAPLGTPSALAPPPSAASTLSYYSLLCLPLAAYAVAF 186

Query: 181 YSLCV 186
           YS+CV
Sbjct: 187 YSVCV 191

[Close]

BLAST of Carg16838 vs. ExPASy TrEMBL
Match: A0A5D3CSL9 (Mavicyanin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00340 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 6.6e-62
Identity = 129/176 (73.30%), Postives = 142/176 (80.68%), Query Frame = 0


Query: 7   WICTMGLFTLSAAATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVL 66
           WI TM LFTLS AATVH+VGDS+GWTTL+P DYAKWASS KFHVGDSLLF YNN FHNVL
Sbjct: 12  WISTMALFTLSVAATVHQVGDSSGWTTLIPVDYAKWASSQKFHVGDSLLFKYNNTFHNVL 71

Query: 67  QVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDPGSSS 126
           QV QEQFK+CNSSSPAASY SGADSIPLKRPGTFYFLCG PGHCQLGQKVE+KV   SSS
Sbjct: 72  QVTQEQFKACNSSSPAASYNSGADSIPLKRPGTFYFLCGFPGHCQLGQKVEVKVTSASSS 131

Query: 127 ALLAPSSAPGQSPLPNGPAPLGTPSALAPPPSAASTLS--YYSLLCLPLAAYVVAF 181
            L APS +P       GP+P+G PSA AP PSAAST S  ++S+LCL L   ++ F
Sbjct: 132 HLPAPSPSP-------GPSPMGGPSASAPTPSAASTPSSYFFSMLCLSLEFALLYF 180

[Close]

BLAST of Carg16838 vs. ExPASy TrEMBL
Match: A0A1S3BM10 (mavicyanin-like OS=Cucumis melo OX=3656 GN=LOC103491321 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 6.6e-62
Identity = 129/176 (73.30%), Postives = 142/176 (80.68%), Query Frame = 0


Query: 7   WICTMGLFTLSAAATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVL 66
           WI TM LFTLS AATVH+VGDS+GWTTL+P DYAKWASS KFHVGDSLLF YNN FHNVL
Sbjct: 12  WISTMALFTLSVAATVHQVGDSSGWTTLIPVDYAKWASSQKFHVGDSLLFKYNNTFHNVL 71

Query: 67  QVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDPGSSS 126
           QV QEQFK+CNSSSPAASY SGADSIPLKRPGTFYFLCG PGHCQLGQKVE+KV   SSS
Sbjct: 72  QVTQEQFKACNSSSPAASYNSGADSIPLKRPGTFYFLCGFPGHCQLGQKVEVKVTSASSS 131

Query: 127 ALLAPSSAPGQSPLPNGPAPLGTPSALAPPPSAASTLS--YYSLLCLPLAAYVVAF 181
            L APS +P       GP+P+G PSA AP PSAAST S  ++S+LCL L   ++ F
Sbjct: 132 HLPAPSPSP-------GPSPMGGPSASAPTPSAASTPSSYFFSMLCLSLEFALLYF 180

[Close]

BLAST of Carg16838 vs. ExPASy TrEMBL
Match: A0A0A0KHQ2 (Mavicyanin OS=Cucumis sativus OX=3659 GN=Csa_6G410670 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.4e-59
Identity = 124/179 (69.27%), Postives = 142/179 (79.33%), Query Frame = 0


Query: 7   WICTMGLFTLSAAATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVL 66
           WI TM LFTLSAAATVH+VGDS GWTTL+P DYAKWASS KFHVGD+LLF YN+ FHN L
Sbjct: 12  WISTMALFTLSAAATVHQVGDSPGWTTLIPVDYAKWASSQKFHVGDTLLFKYNSTFHNAL 71

Query: 67  QVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDPGSSS 126
           QV QEQ+K+CNSSSP ASY+SGADSI LKRPGTFYFLCG PGHCQLGQKVE+KV  GSSS
Sbjct: 72  QVTQEQYKACNSSSPVASYSSGADSIVLKRPGTFYFLCGFPGHCQLGQKVEVKVTSGSSS 131

Query: 127 ALLAPSSAPGQSPLPNGPAPLGTPSALAPPPSAASTLSYYSLLCLPLAAYVVAFYSLCV 186
            L APS +PG S     P+P+G PSA AP PSAAS+LS++  + + L+      YS+ V
Sbjct: 132 HLPAPSPSPGPS-----PSPMGGPSASAPTPSAASSLSHFFSMLICLSLEFALLYSVFV 185

[Close]

BLAST of Carg16838 vs. TAIR 10
Match: AT5G26330.1 (Cupredoxin superfamily protein )

HSP 1 Score: 131.3 bits (329), Expect = 7.8e-31
Identity = 76/177 (42.94%), Postives = 107/177 (60.45%), Query Frame = 0


Query: 9   CTMGLFTLSAAATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQV 68
           C + +  LS AA V+KVGDS GWTT+   DY  WAS+  FH+GD++LF YN +FHNV++V
Sbjct: 11  CIVVMLRLSEAA-VYKVGDSAGWTTIANVDYKLWASTKTFHIGDTVLFEYNPQFHNVMRV 70

Query: 69  DQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV-DPGSSSA 128
               ++SCN+S P +++T+G DSI L   G  +F CG+PGHC  GQK+++ V  P SS+ 
Sbjct: 71  THPMYRSCNTSKPISTFTTGNDSITLTNHGHHFFFCGVPGHCLAGQKLDLHVLLPASSTP 130

Query: 129 LLAPSSAPGQSPLPNGPAPLGT-PSALAPPPSAASTLSYYSLLCLPLAAYVVAFYSL 184
           L  P ++   SP      P  T P+A  P PS +   S  S++   + A V    SL
Sbjct: 131 LSDPPTSSSSSP------PSTTIPAAGVPGPSPSLAASLPSMVTAQIVAVVTLLVSL 180

[Close]

BLAST of Carg16838 vs. TAIR 10
Match: AT2G31050.1 (Cupredoxin superfamily protein )

HSP 1 Score: 127.5 bits (319), Expect = 1.1e-29
Identity = 77/183 (42.08%), Postives = 106/183 (57.92%), Query Frame = 0


Query: 11  MGLFTLSAAATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQ 70
           + LF +S   TVHKVGDS GW T++  +Y  WAS+  F VGDSL+F YN  FH+V +V  
Sbjct: 17  VALFGISVGGTVHKVGDSDGW-TIMSVNYETWASTITFQVGDSLVFKYNKDFHDVTEVTH 76

Query: 71  EQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDPGSSSALLA 130
             ++ C  S P A Y +G+D + L +PG  +F+CG PGHC +GQK++I V P S   + A
Sbjct: 77  NDYEMCEPSKPLARYETGSDIVILTKPGLQHFICGFPGHCDMGQKLQIHVLPASLGPVAA 136

Query: 131 P----------SSAPGQSPLPNGP---APLGTPSALAPPP-SAASTLSYYSLLC-LPLAA 179
           P           S+P QSPL   P   AP+      +P P SAAS  + +  LC LPL +
Sbjct: 137 PVPGPVRPPSSFSSPSQSPLAESPVNHAPVQYQMGPSPAPHSAASNSNVWIGLCFLPLLS 196

[Close]

BLAST of Carg16838 vs. TAIR 10
Match: AT2G26720.1 (Cupredoxin superfamily protein )

HSP 1 Score: 122.5 bits (306), Expect = 3.6e-28
Identity = 71/188 (37.77%), Postives = 103/188 (54.79%), Query Frame = 0


Query: 13  LFTLSAAATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQ 72
           LF ++   TVHKVG++ GW T++  DY  WASS  F VGD+L+F YN  +H+V +V    
Sbjct: 19  LFGVAVGGTVHKVGNTKGW-TMIGGDYEAWASSRVFQVGDTLVFAYNKDYHDVTEVTHND 78

Query: 73  FKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDPGSSSALLAP- 132
           F+ C SS P   Y +G+DSI L +PG  +F+CG+PGHC+ GQK++I V P S   +  P 
Sbjct: 79  FEMCESSKPLRRYKTGSDSISLTKPGLQHFICGVPGHCKKGQKLQIHVLPASLGHVAVPV 138

Query: 133 ---------SSAPGQSPLPNGPAPLGTPSALAPPPSAASTLS-------YYSLLCLPLAA 184
                    SS+P  SPL + P        + P P++ S  S        + L  + L  
Sbjct: 139 PGPVRSQSSSSSPSPSPLVDPPVNNAPQYQMGPTPASHSAASADFIFTFSFDLTLIDLCT 198

[Close]

BLAST of Carg16838 vs. TAIR 10
Match: AT2G32300.1 (uclacyanin 1 )

HSP 1 Score: 102.8 bits (255), Expect = 3.0e-22
Identity = 59/158 (37.34%), Postives = 86/158 (54.43%), Query Frame = 0


Query: 20  ATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSS 79
           AT H +G  +GWT  V      WA+   F VGD+L+F+Y   FH+V++V + +F SC + 
Sbjct: 23  ATDHTIGGPSGWT--VGASLRTWAAGQTFAVGDNLVFSYPAAFHDVVEVTKPEFDSCQAV 82

Query: 80  SPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDPGSSSALLAP-------- 139
            P  ++ +G   +PL  PG  YF+CG+PGHC  G K+E+ V P ++ A  AP        
Sbjct: 83  KPLITFANGNSLVPLTTPGKRYFICGMPGHCSQGMKLEVNVVPTATVAPTAPLPNTVPSL 142

Query: 140 ------SSAPGQSPLPNGPAPLGTPSALAPPPSAASTL 164
                 S  P Q  LP  P P+ +PS+  P PS++  L
Sbjct: 143 NAPSPSSVLPIQPLLPLNPVPVLSPSSSTPLPSSSLPL 178

[Close]

BLAST of Carg16838 vs. TAIR 10
Match: AT3G17675.1 (Cupredoxin superfamily protein )

HSP 1 Score: 94.7 bits (234), Expect = 8.1e-20
Identity = 44/107 (41.12%), Postives = 58/107 (54.21%), Query Frame = 0


Query: 16  LSAAATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKS 75
           L +  T H VGDS GW      +Y  W    +FHVGD L+FNY +  HNV+QV+   +  
Sbjct: 2   LKSEGTEHIVGDSNGWELFT--NYTNWTQGREFHVGDVLVFNYKSDQHNVMQVNSTAYTD 61

Query: 76  CNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDP 123
           C   +    +T G DSI L   G  +F+CG+  HC  GQK+ I V P
Sbjct: 62  CGLDNYTTLFTKGNDSIILSEVGKLWFICGVDDHCVNGQKLSINVAP 106

The following BLAST results are available for this feature:

BLAST of Carg16838 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6571468.1	6.3e-99	100.00	hypothetical protein SDJN03_28196, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7011230.1	6.3e-99	100.00	hypothetical protein SDJN02_26133, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023553590.1	2.6e-97	98.38	mavicyanin [Cucurbita pepo subsp. pepo]	[more]
XP_022963846.1	3.4e-97	98.92	mavicyanin [Cucurbita moschata]	[more]
XP_022967382.1	3.0e-93	94.59	mavicyanin [Cucurbita maxima]	[more]

BLAST of Carg16838 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P80728	2.3e-59	100.00	Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1	[more]
P00302	1.8e-24	50.96	Stellacyanin OS=Toxicodendron vernicifluum OX=4013 PE=1 SV=1	[more]
Q41001	3.8e-22	41.77	Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
O82081	4.2e-21	37.34	Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1	[more]
A0A0M4FTF3	3.3e-18	40.98	Blue copper protein OS=Petunia hybrida OX=4102 GN=BCP PE=2 SV=1	[more]

BLAST of Carg16838 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HH72	1.7e-97	98.92	mavicyanin OS=Cucurbita moschata OX=3662 GN=LOC111464034 PE=4 SV=1	[more]
A0A6J1HQP3	1.5e-93	94.59	mavicyanin OS=Cucurbita maxima OX=3661 GN=LOC111466927 PE=4 SV=1	[more]
A0A5D3CSL9	6.6e-62	73.30	Mavicyanin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G0034...	[more]
A0A1S3BM10	6.6e-62	73.30	mavicyanin-like OS=Cucumis melo OX=3656 GN=LOC103491321 PE=4 SV=1	[more]
A0A0A0KHQ2	1.4e-59	69.27	Mavicyanin OS=Cucumis sativus OX=3659 GN=Csa_6G410670 PE=4 SV=1	[more]

BLAST of Carg16838 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G26330.1	7.8e-31	42.94	Cupredoxin superfamily protein	[more]
AT2G31050.1	1.1e-29	42.08	Cupredoxin superfamily protein	[more]
AT2G26720.1	3.6e-28	37.77	Cupredoxin superfamily protein	[more]
AT2G32300.1	3.0e-22	37.34	uclacyanin 1	[more]
AT3G17675.1	8.1e-20	41.12	Cupredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 19..127 e-value: 6.2E-42 score: 144.1
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 20..120
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 31..114 e-value: 5.5E-30 score: 103.2
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 21..122 score: 43.665627
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..151
None	No IPR available	PANTHER	PTHR33021:SF342	MAVICYANIN-LIKE	coord: 11..176
IPR039391	Phytocyanin	PANTHER	PTHR33021	BLUE COPPER PROTEIN	coord: 11..176
IPR028871	Blue (type 1) copper protein, binding site	PROSITE	PS00196	COPPER_BLUE	coord: 98..114
IPR041845	Mavicyanin	CDD	cd11014	Mavicyanin	coord: 21..121 e-value: 8.62988E-63 score: 187.601

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16838-RA	Carg16838-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0046872	metal ion binding