Carg16823 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCGCGATGCTCAATGGAGCTGAATGCCTCAAGATCACCAGGGAATTGGGTTTTTCGGCTTCCAATCTCCACGGCAGGAATTTCCCCAAATTAGGTTTAGTTTCCAGTTTTCGGTGTTCTAAGGCCGTGTCCATGGCGCCTAAGTGCAGTGTTTCCGCTTCGCGGCCGGTTTCTCAGCCTAGGTTTATTCAGCACAAGAAAGAGGCATTCTGGTTTTATAGGTTCCTCTCGATTGTGTACGACCACGTCATAAACCCTGGGCATTGGACTGAGGACATGAGGGATGAAGCTCTTGAGCCAGCGGATCTCAGCGACAGAAATATGATTGTGGTGGATGTTGGTGGTGGCACTGGATTCACCACTTTAGGGATAGTGAAGCATGTGGATGCCAAAAATGTAACCATTCTGGATCAGTCGCCTCATCAGCTTGCCAAGGCTAAGCAGAAAGAGGCCTTGAAAGATTGCAAAATTATTGAAGGGGATGCTGAGGATCTTCCATTTCCTACTGATTATGCTGATAGATATGTGTCTGCTGGAAGGTGTGCTGCTCAAACTCTTCTCTAGCTTTTTTTGTGCATGTTCTTTGGTAATGTATATTTATTTATGTTGATTTACTAGTTTGAACTAAAGTATGGGGTGTCCCTTTTTAAGTGAAATTTGTGAATCACTTGGAAACGAGATCAAATTTAGAATATATTTATCTATAATCATGCATTGCCATGTCAAGAGGGTAGAAAGCACGACTCTTCTTCATAGTGGTATCATATTGTCCACTTTGAACATAAGCTCTCATGTCTTTACTTTTGGTTTTCCAAAAGGCCTCGTACCAATGGAGATGTATTCCTTACTTATAAACTCATGATCAACCCCTTAATTAGTCGATGTGGGACACCTCTCCCAACGATCCTCCTCTCAAACAAAGTACACCTCTCCCAACGATCCTCCTCTGAGGCCTATGGAGCCCCTTGATCAGCCTCCCCTTAATCGAGACTCGACTCCTTTTCTTTGGAGCCCTCGAACAAAGTACACCCTTTGTTCGACGCTTAAGGATTCTATTGACATGGCTAAATTAAGGACATGACTCTGATTAGAAATCACGACTCGTCCACTTTGAGCATAAGCTCTCATGGCTTTACTTTTGGTTTCCCCAAAAGGCTTCATACCAATGGAGATGTATTCCTTACTTATAAACTCTTGATCAACCCCTTAATTAGTCGATGTGGGACACCTCTCCCAACGATCCTCCTCTCAAACAAAGTTCACCATAGAGCCTCCTCTGAGGCCTATGGAGCCCCTTGATCAGTCTCCCCTTAATCGAGGCTCAACTCCTTTTCTCTGGAGCCCTCGAACAAAGTACACCATTTGTTCGATACTTAAGGATTCTATTGATATGGCTAAGTTAAGAACATGACTCTGATACTATGTTAGAAATCACGGCTCTCCACAATGGAGCTAAGGTTGCCACTTATTATATTCGGAGAAGCTCTAGAATTAACAGTCTTTTCACAGTTTTTATGTGTCCCTTCGTGCCATATATTAGACCTTTGTATCATCAATTTGTTTAACTAAACAAGATGCTGGGAACAAGTCATGATTTCTCTCCTTTGCTTTGATGTTTGCCTGAATTATAAATGCTTTCTTCCTTCTGAGCATAATAGTAGTGTTTACTTTGAGCATAAGCTCTCGTGACTTTACTTTTGGTTTCCCCAAAAGGCCTCATATCAATGGAGATGTGTTCCTTACTTATAAACCCATGATCAACCCCTTAATTAGTTGATGTGGGAGACCCCTCCCAACACAAGATTTAAAAAGTGGGTCATTCTCACTCATCTTTTCAACGCTAATTTAGCTAGAGGAATCTGCAATTGTGAGAGAACAAGAGAGGGAGATATGTTTATTAGTATCTCTGATCTTGTTTTGTGATTTCTCTGCTCAGTATTGAATATTGGCCAGACCCACAGCGTGGCATCAAGGAAGCATATAGGGTCCTTAAGCTTGGAGGAAAAGCATGCTTGATTGGTCCAGTGTACCCAACGTTTTGGTTATCTCGTTTCTTTGCAGATGTGTGGATGCTTTTTCCAAAGGAAGAGGAGTATATCCAGTGGTTCAAAAATGCTGGATTTACTGACGTCCAATTGAAAAGGATTGGTCCAAAATGGTATCGAGGAGTTCGTCGCCACGGTCTAATAATGGGATGTTCTGTGACTGGTGTGAAACCATCCTCTGGCGACTCTCCTTTGCAGGTAATTTTTTTTCACCATTTTTGACCTATGTTGTGTTAGGAATTACGACTCTCCACGAGGGTATGATATTGTCCACTTTAAACATAAACTCTCATGGTTTTGCTTTTGATTTTTCCAAAAGGCCTCGTACTAATGTAGATGTTTTCCTTACTTATAAATTCATGATGAACTCCTTAATTAGTTAATTAGCCGATGTGGGACTCATTTTCCAACAATCCTTAACAATCCTCCCTGCGAACAAAGTACACTATAGAGTCCCCCTTAATCGAGGCTCGACTCCTTCTCTGGAGCCCTCAAACAAAGCACACCATTTGTTCGATACTTGAGTCACTTTTGACTACACTTTCGAGGGTCTCAACTTCTTTGTTCGACATCTGAGGATTCCATTGACATGACTAAGTTAAGGGCATGGCTATGATACCATGTTAGGAATCACGAACCTCCACAATAGTATGATATTGTCCACCTTGAGCATAAGCTCTCATGACTTTCCTTTTGGTTTTCCCAAAAGACCTCATACCAAAGGAGATGTATTTCTTACTTATAAACCCACTATCAATCTCTTAATTAACCAAGGTGGGACTCCTCTTCCAACAATCCTCAACAATTAGAACATCGACTGTTCTTTTGTATCTTTGCTAAGATGCACCTGCAAAAACAACCGGAACAATGATGAATTATCATATGGGTTCGGTTCTTGGAAATCAAGACTTCGAATATGAACACTCAGTCCAACCCACTAACAATTCCGAATGGCTGAACATGTGCAAAAACCAAGTACATGATCATCATGCAGAATCAGTTCTTTGAAAATCATGACATGGAACATGTACACTCAGTGTAGGTAGCCACAAACAATTATGAACACGATAATCATCTGCAGTGTGAAATCTGTAACTATCTCATAATGTATTTGTTTGCAGCTTGGGCCGAAGGAAGAGGACGTGTCAAAACCCGTAAATCCATTCGTGTTCCTGGGTCGCTTCCTTCTGGGAGCCATGGCAGCTACATACTATGTGCTGGTTCCCATATACATGTGGATCAAAGATCAGATTGTTCCAAAAGGTCAACCAATCTGAGCTGGGAAGAAGGATTCAAAGCTCATATCCATTCTACTCTTGCAGGTGCAATTTTAGTTTTCTTGTGCTATCACTCTTCGTTTCTTGCTGCTTGTTTTTTCTACATTGATAACGAATTGAATACCCATCAGAAATGTGTATGATTCGGATTCAAACTTTTCTTGGAATCAGAGAACTTCCACAGGACCAATCCCTTTGCCCTTTATGTCATGTTATGGTCAGAGTGACTTCAGGATCAGGCTTAAAATATTGATGGACAAACTTATAAAAATTTGAATAATAATTAAGTTATATTTAGTATAAGGACTAGATTTTTGTTAATTTTTACATGTATTGTGAGAGGTATCGATTAATTCTTAACATTGATGTTGCTTTTGGAGCTGCAATCTTATTTAGGAGTGTCAAGACATATACAACTTCAAAGAACGATATGATATAAATTCAAGGTATATCTCTCTCGAGTCGGGTCGAGAAAGGTAAGGAGTACGTCATTTATGGTTTCTGTTGAAATATGGACTTATAGTCTCTATATAATCATGCCCACTCTTTCACCTTCCTATATTTGGCCTTTTTTTT ATGGCTTCCGCGATGCTCAATGGAGCTGAATGCCTCAAGATCACCAGGGAATTGGGTTTTTCGGCTTCCAATCTCCACGGCAGGAATTTCCCCAAATTAGGTTTAGTTTCCAGTTTTCGGTGTTCTAAGGCCGTGTCCATGGCGCCTAAGTGCAGTGTTTCCGCTTCGCGGCCGGTTTCTCAGCCTAGGTTTATTCAGCACAAGAAAGAGGCATTCTGGTTTTATAGGTTCCTCTCGATTGTGTACGACCACGTCATAAACCCTGGGCATTGGACTGAGGACATGAGGGATGAAGCTCTTGAGCCAGCGGATCTCAGCGACAGAAATATGATTGTGGTGGATGTTGGTGGTGGCACTGGATTCACCACTTTAGGGATAGTGAAGCATGTGGATGCCAAAAATGTAACCATTCTGGATCAGTCGCCTCATCAGCTTGCCAAGGCTAAGCAGAAAGAGGCCTTGAAAGATTGCAAAATTATTGAAGGGGATGCTGAGGATCTTCCATTTCCTACTGATTATGCTGATAGATATGTGTCTGCTGGAAGTATTGAATATTGGCCAGACCCACAGCGTGGCATCAAGGAAGCATATAGGGTCCTTAAGCTTGGAGGAAAAGCATGCTTGATTGGTCCAGTGTACCCAACGTTTTGGTTATCTCGTTTCTTTGCAGATGTGTGGATGCTTTTTCCAAAGGAAGAGGAGTATATCCAGTGGTTCAAAAATGCTGGATTTACTGACGTCCAATTGAAAAGGATTGGTCCAAAATGAATCAGTTCTTTGAAAATCATGACATGGAACATGTACACTCAGTCTTGGGCCGAAGGAAGAGGACGTGTCAAAACCCGTAAATCCATTCGTGTTCCTGGGTCGCTTCCTTCTGGGAGCCATGGCAGCTACATACTATGTGCTGGTTCCCATATACATGTGGATCAAAGATCAGATTGTTCCAAAAGGTCAACCAATCTGAGCTGGGAAGAAGGATTCAAAGCTCATATCCATTCTACTCTTGCAGGTGCAATTTTAGTTTTCTTGTGCTATCACTCTTCGTTTCTTGCTGCTTGTTTTTTCTACATTGATAACGAATTGAATACCCATCAGAAATGTGTATGATTCGGATTCAAACTTTTCTTGGAATCAGAGAACTTCCACAGGACCAATCCCTTTGCCCTTTATGTCATGTTATGGTCAGAGTGACTTCAGGATCAGGCTTAAAATATTGATGGACAAACTTATAAAAATTTGAATAATAATTAAGTTATATTTAGTATAAGGACTAGATTTTTGTTAATTTTTACATGTATTGTGAGAGGTATCGATTAATTCTTAACATTGATGTTGCTTTTGGAGCTGCAATCTTATTTAGGAGTGTCAAGACATATACAACTTCAAAGAACGATATGATATAAATTCAAGGTATATCTCTCTCGAGTCGGGTCGAGAAAGGTAAGGAGTACGTCATTTATGGTTTCTGTTGAAATATGGACTTATAGTCTCTATATAATCATGCCCACTCTTTCACCTTCCTATATTTGGCCTTTTTTTT ATGGCTTCCGCGATGCTCAATGGAGCTGAATGCCTCAAGATCACCAGGGAATTGGGTTTTTCGGCTTCCAATCTCCACGGCAGGAATTTCCCCAAATTAGGTTTAGTTTCCAGTTTTCGGTGTTCTAAGGCCGTGTCCATGGCGCCTAAGTGCAGTGTTTCCGCTTCGCGGCCGGTTTCTCAGCCTAGGTTTATTCAGCACAAGAAAGAGGCATTCTGGTTTTATAGGTTCCTCTCGATTGTGTACGACCACGTCATAAACCCTGGGCATTGGACTGAGGACATGAGGGATGAAGCTCTTGAGCCAGCGGATCTCAGCGACAGAAATATGATTGTGGTGGATGTTGGTGGTGGCACTGGATTCACCACTTTAGGGATAGTGAAGCATGTGGATGCCAAAAATGTAACCATTCTGGATCAGTCGCCTCATCAGCTTGCCAAGGCTAAGCAGAAAGAGGCCTTGAAAGATTGCAAAATTATTGAAGGGGATGCTGAGGATCTTCCATTTCCTACTGATTATGCTGATAGATATGTGTCTGCTGGAAGTATTGAATATTGGCCAGACCCACAGCGTGGCATCAAGGAAGCATATAGGGTCCTTAAGCTTGGAGGAAAAGCATGCTTGATTGGTCCAGTGTACCCAACGTTTTGGTTATCTCGTTTCTTTGCAGATGTGTGGATGCTTTTTCCAAAGGAAGAGGAGTATATCCAGTGGTTCAAAAATGCTGGATTTACTGACGTCCAATTGAAAAGGATTGGTCCAAAATGA MASAMLNGAECLKITRELGFSASNLHGRNFPKLGLVSSFRCSKAVSMAPKCSVSASRPVSQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDEALEPADLSDRNMIVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEALKDCKIIEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIKEAYRVLKLGGKACLIGPVYPTFWLSRFFADVWMLFPKEEEYIQWFKNAGFTDVQLKRIGPK Homology
BLAST of Carg16823 vs. NCBI nr
Match: KAG7011215.1 (2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 532.7 bits (1371), Expect = 1.7e-147 Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0
BLAST of Carg16823 vs. NCBI nr
Match: XP_023554281.1 (2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 531.2 bits (1367), Expect = 5.0e-147 Identity = 254/255 (99.61%), Postives = 254/255 (99.61%), Query Frame = 0
BLAST of Carg16823 vs. NCBI nr
Match: XP_022963685.1 (2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic [Cucurbita moschata]) HSP 1 Score: 527.7 bits (1358), Expect = 5.5e-146 Identity = 252/255 (98.82%), Postives = 253/255 (99.22%), Query Frame = 0
BLAST of Carg16823 vs. NCBI nr
Match: XP_022967370.1 (2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 526.2 bits (1354), Expect = 1.6e-145 Identity = 251/255 (98.43%), Postives = 253/255 (99.22%), Query Frame = 0
BLAST of Carg16823 vs. NCBI nr
Match: XP_038888008.1 (2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic [Benincasa hispida]) HSP 1 Score: 509.2 bits (1310), Expect = 2.0e-140 Identity = 241/255 (94.51%), Postives = 247/255 (96.86%), Query Frame = 0
BLAST of Carg16823 vs. ExPASy Swiss-Prot
Match: Q9LY74 (2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VTE3 PE=1 SV=1) HSP 1 Score: 423.7 bits (1088), Expect = 1.5e-117 Identity = 208/259 (80.31%), Postives = 227/259 (87.64%), Query Frame = 0
BLAST of Carg16823 vs. ExPASy Swiss-Prot
Match: P23525 (2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=1) HSP 1 Score: 409.5 bits (1051), Expect = 2.9e-113 Identity = 201/264 (76.14%), Postives = 225/264 (85.23%), Query Frame = 0
BLAST of Carg16823 vs. ExPASy Swiss-Prot
Match: Q6ZLD3 (2-methyl-6-phytyl-1,4-hydroquinone methyltransferase 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=ARSM2 PE=2 SV=1) HSP 1 Score: 377.9 bits (969), Expect = 9.3e-104 Identity = 174/214 (81.31%), Postives = 193/214 (90.19%), Query Frame = 0
BLAST of Carg16823 vs. ExPASy Swiss-Prot
Match: Q2QM69 (2-methyl-6-phytyl-1,4-hydroquinone methyltransferase 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0615400 PE=2 SV=2) HSP 1 Score: 374.0 bits (959), Expect = 1.3e-102 Identity = 176/220 (80.00%), Postives = 194/220 (88.18%), Query Frame = 0
BLAST of Carg16823 vs. ExPASy Swiss-Prot
Match: C3MCY6 (Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=394 GN=ubiE PE=3 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 7.8e-10 Identity = 45/123 (36.59%), Postives = 63/123 (51.22%), Query Frame = 0
BLAST of Carg16823 vs. ExPASy TrEMBL
Match: A0A6J1HIQ1 (2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111463939 PE=3 SV=1) HSP 1 Score: 527.7 bits (1358), Expect = 2.7e-146 Identity = 252/255 (98.82%), Postives = 253/255 (99.22%), Query Frame = 0
BLAST of Carg16823 vs. ExPASy TrEMBL
Match: A0A6J1HUA0 (2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111466918 PE=3 SV=1) HSP 1 Score: 526.2 bits (1354), Expect = 7.8e-146 Identity = 251/255 (98.43%), Postives = 253/255 (99.22%), Query Frame = 0
BLAST of Carg16823 vs. ExPASy TrEMBL
Match: A0A5A7URW9 (2-methyl-6-phytyl-1,4-hydroquinone methyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00860 PE=3 SV=1) HSP 1 Score: 502.7 bits (1293), Expect = 9.2e-139 Identity = 240/257 (93.39%), Postives = 248/257 (96.50%), Query Frame = 0
BLAST of Carg16823 vs. ExPASy TrEMBL
Match: A0A0A0LNX0 (SAM_MPBQ_MSBQ_MT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G228370 PE=3 SV=1) HSP 1 Score: 502.7 bits (1293), Expect = 9.2e-139 Identity = 240/257 (93.39%), Postives = 247/257 (96.11%), Query Frame = 0
BLAST of Carg16823 vs. ExPASy TrEMBL
Match: A0A1S3BMS7 (2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491265 PE=3 SV=1) HSP 1 Score: 502.7 bits (1293), Expect = 9.2e-139 Identity = 240/257 (93.39%), Postives = 248/257 (96.50%), Query Frame = 0
BLAST of Carg16823 vs. TAIR 10
Match: AT3G63410.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 423.7 bits (1088), Expect = 1.0e-118 Identity = 208/259 (80.31%), Postives = 227/259 (87.64%), Query Frame = 0
BLAST of Carg16823 vs. TAIR 10
Match: AT5G57300.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 47.4 bits (111), Expect = 2.0e-05 Identity = 37/115 (32.17%), Postives = 51/115 (44.35%), Query Frame = 0
BLAST of Carg16823 vs. TAIR 10
Match: AT5G57300.2 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 47.4 bits (111), Expect = 2.0e-05 Identity = 37/115 (32.17%), Postives = 51/115 (44.35%), Query Frame = 0
BLAST of Carg16823 vs. TAIR 10
Match: AT5G57300.3 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 47.4 bits (111), Expect = 2.0e-05 Identity = 37/115 (32.17%), Postives = 51/115 (44.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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