Carg16690 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TATTAGAGTCGTGATCGGAACCATGTTTGTAAAATCTGGAGTGTGGTCTCCGACTGTCGGATATTTCTTTGTTTCTTTCTTCCATTTTGAATTCTTTTCTCCTAATTATTCCAAAATGTTTCTTATCGGCTCTGAAATCAGAGTACCGATCATCTTTGCGGCTTGTTTCGATACCGATTTCGCCCTCAGTGATTTTTCATCGGTTCGCTTTGCGAGATCAGGATTCAGGAGCAGCAATGTCTTGCAATGCGTGCAAATTCTGCACGGCGCTGGATGCTTAGGTTTCGATTATGATCCTCTATGTTCTAGGTATAGTCGATCTCTCCTATTACGCTCTGCTCGTCCTCAACTATGGTCCGCCTCTCTTAGTTCTAGGGACCTAATTCTTCCAATTTCTTAAGAGTACGAACTTAAGATTAGCTTGTACATTTGCTTTTTTTCTTCACTTGTTTCTGCTGAGACGAATTTATTAGCTTGTAGAATAGAGTTATGCAGAGAATAGAGTATCTCTGGGATTCTTCTTTTCGGTTTGCCAGAATTACACAAAAGAGAATAAACACTTTGCCTAATTCTGAAGTTGGAATGATATGTTGTGGTAATATTTGTATGTTCATCTTTGGAATGGCAAATGTATATTTCATAAAGCTTTAAACCGTCAATTTACCTATCTGTTTATGTAGTTGTTGATGCTATTATGGAGCTACTTTTCTGTTGTTCTAACAAATCCGGGGTGTGTTCCACCGCCCCGTTGCCATCACTGTTTTGTTTGTAAGTTCTTCGATGTTTTCCTATAGAAGTTTACTATGATTCTAGCTGGTAAACAAGATATAAATACTGATTATGTTTTGTTTGGTAGGTGGAAGGTGTGTATTGAAACTGGACCATCATTGTGTGTTGGTCGTCAATCGTGTTGGAGCAAAGTACTATCAGTACTTCCTGCTATTTTTGGTAGGCACAACAAGATTATTGGCTTCCTTCTGATCTCTAGTTCCTTGTTTCCATGGTTCTCGTTGTGTTGGATGCTCTCTTTGGGCTTTCCCTTTTGGGTTTTCCCTCAAGGTTTTTAAAGTGCGTTTGCTGGAGAAGGGAACGAGTGCTAGCAAGGACGTCGGGCCCCGAAGGGGTGGATTGTGAGATCCCACATCGGGAGGAGAACGAAACATTTTTTTAGAAGGGTGTGGAAACCTTTACCTAGCAGATGCGTTTCAAAAATCTTAAAAGGAAGCCCGAAAGAGAAAGCCCAAAGAAGAGAATATCTACTAGTGGTGGGCTCGAGCTCTTACATATAATATCCGGTTCGAAAATAAATGATGCCTCTTATATAATCATGTATCGGTGGATCCTAGTTCTTCGGCATTTTGTCGTTGACATAACCTGACATCATAGATATTCTAAATGTTCTATAGAGATGTTTTCTGATTGCGTTATGGTTGCATCATTTCACTGCTCGTTTGTCTTTATGATCTGTGTAAGACAAACGTTTTATCCTTTGAGTACTTGAAAATGTTTCTTCTTCTTGTTTCCATAGTTACAATACTTCAACATTCATCTCTAATTTTGGCTGCTTGTTCCATACAGTCTTGAATTTACCATTTGCAGCGAGTGTTATGAGTTTTCTGATATTGCACGTATCACCGGTAGCAGTCAATACCACCAGAATTAAGGTAAGGCCATCTAGAAGTAGTATTTTGTTTGCTTTGCTTTTAAACATTTAACAGGGGCTGAATTGGTCTATTGGATATTTGATTCTCCATTGCTAGGTGTCACGGTCATGCTCATCCAAGGCGTATTGCCCATGGCTGCATGTCAAACCCCTTGTGTTGTACCACTTTGTTGTTTTCCTTCACCGTATTCATGATGTATAGTTTCCTTATAGTTTCGGAAAAATCATGTCTATGCTTGCTAGATTAAAAATGCCTTGGAATGTACTATAGGGGATGCGATTAGTCGTCAATTCTTCCTACCCGGAATTATATAGGATCTAAGTTGTTGTGTTGCCTTCTTTCCTTATATCCTATAACACTGCTTTCTTCATTTCTCTCAATCTTGCTTTCAAACTCTCTCTCTAAAATCTCTCTCCCCCTGTTTTCTAAAACCTTCTTAAAACAGGACCAGAAGCTTGAGTATACGTCACCCGACCGAAGGCGACACGATTTCGAGTTGGCTGACTCACTCCATGGTAAGAGTAAGTGCCGCACAACCGCTTGCAAGCATTTCGTAAGAGTGCGATTGTGACACAAGGCATACGAGAAGAAAACCACTAAAAAAAATGGCATCATGGCCTTGGTCGCCGAAGAATTTTGAGCTGGTATCTTCTTCACTACTCACTGGCCTCTTCCTTGCTGACATTCACTTATTCACTTATTGATGGTAGATCTCTCTGTTGGTAGCTAGACGCTAATTTTACCATATTGATGTCCATATTTAGTTACAAGCTACCCAAGTTTGTAGAGTTTGATTTGACTTGACTGAGCTATTTAGATTAGATTTGATTTGGTTATTTGGATTAGATTTAGTCATAATAGGGTTTATTATATATATTAGAATTTGATATTGGGATTTGAGAGAGTTTTGGGTGTCATCGTATTTGTTGAGTGACATATTGGTGAGAGTCTTTGCAGCGTGATAGTGAGGTATTCACTTGTAACACTTGGTTTATTAGTGATTGGTTGCTACTTGTGGATATAGGGGAACTTCTTCTCTCCGAACCATGTAAATATCTTGGTTGGTTGCTACTTGTGGATATAGGGGAACTTCTTCTCTACGAACCATGTAAATATCTTGGTGTCTCTTTGTGTAATTTCGTTCATTGGTGTTGTGAGTACATTTATTCCGCTTTGGACGCACAACAACTCTCTCACCAGCGTTTGCTTCCTCTAGTACTTACTCTACTGCTTTCAGCAGATGAAACTCCCCTATTTCTCATCTCTTGTAATATGCTGGAGTTCTTTTGCGTGTGATACTAAATAAATTCATGATTCAGGTGTTGAGAATGGATTAGAAGTACTGGTTTATCGCTGCAGCTTCTCAAGATGACCTAAAGCAGAAGCATAATCTCCAAGGCATCGAATATCCAATAAGGTCAGACTTGAATCTACTTCAGGAATTCTAA TATTAGAGTCGTGATCGGAACCATGTTTGTAAAATCTGGAGTGTGGTCTCCGACTGTCGGATATTTCTTTGTTTCTTTCTTCCATTTTGAATTCTTTTCTCCTAATTATTCCAAAATGTTTCTTATCGGCTCTGAAATCAGAGTACCGATCATCTTTGCGGCTTGTTTCGATACCGATTTCGCCCTCAGTGATTTTTCATCGGTTCGCTTTGCGAGATCAGGATTCAGGAGCAGCAATGTCTTGCAATGCGTGCAAATTCTGCACGGCGCTGGATGCTTAGGTTTCGATTATGATCCTCTATGTTCTAGGTGGAAGGTGTGTATTGAAACTGGACCATCATTGTGTGTTGGTCGTCAATCGTGTTGGAGCAAAGTACTATCAGTACTTCCTGCTATTTTTGTCTTGAATTTACCATTTGCAGCGAGTGTTATGAGTTTTCTGATATTGCACGTATCACCGGTAGCAGTCAATACCACCAGAATTAAGAAGTACTGGTTTATCGCTGCAGCTTCTCAAGATGACCTAAAGCAGAAGCATAATCTCCAAGGCATCGAATATCCAATAAGGTCAGACTTGAATCTACTTCAGGAATTCTAA ATGTTTGTAAAATCTGGAGTGTGGTCTCCGACTGTCGGATATTTCTTTGTTTCTTTCTTCCATTTTGAATTCTTTTCTCCTAATTATTCCAAAATGTTTCTTATCGGCTCTGAAATCAGAGTACCGATCATCTTTGCGGCTTGTTTCGATACCGATTTCGCCCTCAGTGATTTTTCATCGGTTCGCTTTGCGAGATCAGGATTCAGGAGCAGCAATGTCTTGCAATGCGTGCAAATTCTGCACGGCGCTGGATGCTTAGGTTTCGATTATGATCCTCTATGTTCTAGGTGGAAGGTGTGTATTGAAACTGGACCATCATTGTGTGTTGGTCGTCAATCGTGTTGGAGCAAAGTACTATCAGTACTTCCTGCTATTTTTGTCTTGAATTTACCATTTGCAGCGAGTGTTATGAGTTTTCTGATATTGCACGTATCACCGGTAGCAGTCAATACCACCAGAATTAAGAAGTACTGGTTTATCGCTGCAGCTTCTCAAGATGACCTAAAGCAGAAGCATAATCTCCAAGGCATCGAATATCCAATAAGGTCAGACTTGAATCTACTTCAGGAATTCTAA MFVKSGVWSPTVGYFFVSFFHFEFFSPNYSKMFLIGSEIRVPIIFAACFDTDFALSDFSSVRFARSGFRSSNVLQCVQILHGAGCLGFDYDPLCSRWKVCIETGPSLCVGRQSCWSKVLSVLPAIFVLNLPFAASVMSFLILHVSPVAVNTTRIKKYWFIAAASQDDLKQKHNLQGIEYPIRSDLNLLQEF Homology
BLAST of Carg16690 vs. NCBI nr
Match: KAG7016915.1 (hypothetical protein SDJN02_22026 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 389.4 bits (999), Expect = 1.8e-104 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
BLAST of Carg16690 vs. NCBI nr
Match: KAG6579441.1 (hypothetical protein SDJN03_23889, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 283.5 bits (724), Expect = 1.4e-72 Identity = 150/199 (75.38%), Postives = 150/199 (75.38%), Query Frame = 0
BLAST of Carg16690 vs. NCBI nr
Match: XP_022922414.1 (uncharacterized protein LOC111430420 isoform X1 [Cucurbita moschata] >XP_022922415.1 uncharacterized protein LOC111430420 isoform X1 [Cucurbita moschata] >XP_022922416.1 uncharacterized protein LOC111430420 isoform X1 [Cucurbita moschata] >XP_022922417.1 uncharacterized protein LOC111430420 isoform X1 [Cucurbita moschata]) HSP 1 Score: 122.5 bits (306), Expect = 4.0e-24 Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0
BLAST of Carg16690 vs. NCBI nr
Match: XP_022922422.1 (uncharacterized protein LOC111430420 isoform X5 [Cucurbita moschata] >XP_022922423.1 uncharacterized protein LOC111430420 isoform X5 [Cucurbita moschata]) HSP 1 Score: 122.5 bits (306), Expect = 4.0e-24 Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0
BLAST of Carg16690 vs. NCBI nr
Match: XP_022922421.1 (uncharacterized protein LOC111430420 isoform X4 [Cucurbita moschata]) HSP 1 Score: 122.5 bits (306), Expect = 4.0e-24 Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0
BLAST of Carg16690 vs. ExPASy Swiss-Prot
Match: Q8VYP5 (Probable protein S-acyltransferase 14 OS=Arabidopsis thaliana OX=3702 GN=PAT14 PE=2 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 2.7e-07 Identity = 34/89 (38.20%), Postives = 45/89 (50.56%), Query Frame = 0
BLAST of Carg16690 vs. ExPASy Swiss-Prot
Match: Q94C49 (Probable protein S-acyltransferase 13 OS=Arabidopsis thaliana OX=3702 GN=PAT13 PE=2 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 6.2e-04 Identity = 29/86 (33.72%), Postives = 41/86 (47.67%), Query Frame = 0
BLAST of Carg16690 vs. ExPASy TrEMBL
Match: A0A6J1E3B2 (uncharacterized protein LOC111430420 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430420 PE=4 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 1.9e-24 Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0
BLAST of Carg16690 vs. ExPASy TrEMBL
Match: A0A6J1E375 (uncharacterized protein LOC111430420 isoform X5 OS=Cucurbita moschata OX=3662 GN=LOC111430420 PE=4 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 1.9e-24 Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0
BLAST of Carg16690 vs. ExPASy TrEMBL
Match: A0A6J1E432 (uncharacterized protein LOC111430420 isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111430420 PE=4 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 1.9e-24 Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0
BLAST of Carg16690 vs. ExPASy TrEMBL
Match: A0A6J1E3B9 (uncharacterized protein LOC111430420 isoform X6 OS=Cucurbita moschata OX=3662 GN=LOC111430420 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 7.4e-24 Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0
BLAST of Carg16690 vs. ExPASy TrEMBL
Match: A0A6J1E8P6 (uncharacterized protein LOC111430420 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111430420 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 7.4e-24 Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0
BLAST of Carg16690 vs. TAIR 10
Match: AT3G60800.1 (DHHC-type zinc finger family protein ) HSP 1 Score: 57.0 bits (136), Expect = 1.9e-08 Identity = 34/89 (38.20%), Postives = 45/89 (50.56%), Query Frame = 0
BLAST of Carg16690 vs. TAIR 10
Match: AT4G22750.1 (DHHC-type zinc finger family protein ) HSP 1 Score: 45.8 bits (107), Expect = 4.4e-05 Identity = 29/86 (33.72%), Postives = 41/86 (47.67%), Query Frame = 0
BLAST of Carg16690 vs. TAIR 10
Match: AT4G22750.2 (DHHC-type zinc finger family protein ) HSP 1 Score: 45.8 bits (107), Expect = 4.4e-05 Identity = 29/86 (33.72%), Postives = 41/86 (47.67%), Query Frame = 0
BLAST of Carg16690 vs. TAIR 10
Match: AT4G22753.2 (sterol 4-alpha methyl oxidase 1-3 ) HSP 1 Score: 45.8 bits (107), Expect = 4.4e-05 Identity = 29/86 (33.72%), Postives = 41/86 (47.67%), Query Frame = 0
BLAST of Carg16690 vs. TAIR 10
Match: AT4G00840.1 (DHHC-type zinc finger family protein ) HSP 1 Score: 42.0 bits (97), Expect = 6.4e-04 Identity = 25/96 (26.04%), Postives = 45/96 (46.88%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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