Carg16612 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg16612
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDET1- and DDB1-associated protein 1
LocationCarg_Chr15: 8898847 .. 8901618 (-)
RNA-Seq ExpressionCarg16612
SyntenyCarg16612
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCTCCTCCTCCTCCTCCTCCTCCTCGTTCTTGTAACACAAATTTCCCTCTGTAGATTTCGAACAATCAAAATATATTCAGCGGCGTTTTGATGGGGTCTATGCTCGGTGACCTGCCGTCATATGACCCTCACAACTTCAGCCAACTCCGACCCTCCGATCCTTCAACTCCTTCTGTAAGTTTTCAGTAATGGCGGAATCATCGCCCCCTTTGTTTTCGTTCTTGTAATTGATTTCTGTAATCGTTCATACGTTTCTTTTGTTTTCTTGATCCTGTGTTTTTTCCTCTATTTGTGATGATTGTTGTTTCGTTTCTATTGATGCGAATTTGCTCGAGGTTTTGTTTCGTTAAGGTAGGATGTGAATTTGTGATGAAATTTAACCTCCGCTTGATCTTCTTTGCTCTATTGTTATTTGGATTCTCCCAATTTTTGTTCGCATTATTGATCTGTTTTCTGGTTGTGCGTCGTGATGTGGGAAATTTTGTTTTCGTTTTAGGACTTGGAAATTCTTAAATTCTTGGAATTCTTACATGTATGTTTCGATTACATTACAATTGAGTTTCGCTGTTGGTGTGTTTGATCCAGAAACCTGAAGAAGGAAGAATCTAATGAAGTTCATTAGTTTTCTATTAAACGGCAAGGGGTTGTAACATTCTATGGATTGTCCATTTCTTGCACATAGATGGCTCCCCCTTTTCCCCCGAAACCAAAGAATCAAAATGGTGTTCTTGTTTCGATTGTTACTTCTTTTTTTCTCTCTGTCATGGCATTTTAATCTTGTAAAGTCAGTCCTGTGAAAGAAATGATTCGGTTCCTTTGAAAGAAATGATACCAAGGGAACAAATTCTGCAAGGAACAATCACTAAGTTACTGACCTTTCAGAGAAATGATTCTGTTTACTTCTGTTTACTTCTCATATGTAGGTCATCTTTCAAGTTTCTAATGATTCTGATGCCCAAAAGTGCTTTTAGCCTTTGAGCTTGGAGCAGCCTGCAGCCATTTTAAGTTCCCTCTTTGTTTGAGTATGCTTAGGTTCATTGTTTTACAACGAAAAATCGAAAATTGCAGCGACACGGATTCTTCTATACTGCAAATGAACATTCTGTGTTCCTTGTTTCTCTGATTTTCTTGAGTGGTATACAGTTCACTTTCACAGGTTTAAGCTTAAGACTCCCAATGAAATAGTTTGCATAATGTTTGAAGTCGTTCAATCAATGCTTCTTATGTGAGATCCTATATTGGTTGGGGAGGAGAACTAAACATTCTTTATAAGGGTGTGAAAACCTCTCTCTAGAAGATGCATTTTGAAAACCTTGAGGGAAAACCCGAAAGATAAAGTCCAAAGAGGACAATATCTGTTAGCAGTGGGCTTGGACTGATGTTTTGCCTTTTGTCTTTCTACCTTCAATGGAAACATTAAGATAATGCCTTAATGCAGAAGGATTGACAAATCTAGAACCGTTAATGAGAAGTTTTTGATTGAAGAGATTCTGAAAACATCTCATCTAAGCTACCAAACGGTGTGCCCTTCTCCAAAGGGACATCATTTTGGACATAAGACACATTGAAGCAAGATATAACCAATTTTTCCTTGTAATTGTATGCACAAACTTGTGCTTGCTTTGGATATATCACCCATTTTTTGAATTCATTACAAATGAGCATACTTCACGGGTCGTTGTCACCTGTTAATTTTCCATGGATTGGGTGACCATGTAAACGGAAGAGCTGTCTGGTTCAAACTAAATGCTTTCATTGAAGCTTAAACTGCAGTAGAATGCAACATATTTTTACAAGTGGAGTTTCCAGCTGCAAGAAGTAGAACAAGAAGATGAATTCATTTATTTTCTAACGTAACAAACAAGTTGATTATCGAACTTCTCTGATAAGTCAGTTTTAATTTTATGTAGAAGATGATTCCTGCAACCTATCATCCTACCCACAGTAGGACCCTTCCGCCACCAGATCAGGGTAAGCAAGAACATTTGTTTCTTCATTGCTCTTCTAAGGCCATGATTTTACCAACCATACTGATAACTTTGAATCTTGATCAGCAAACTGCTATCATATTCACAAAAGATCTTGGTTGTTGATACCATGTCATTGATTTTTACTGCAGTTATAGATACTGATGCCAAAAATATACTCATACGCCACATTTATCAGCTTACAGAAGAGAAGGTTAGTATGCTTTGATATGAAAAACAATGTATATATGGGGTGAGGTTGTGAGAGCACTCACACATTCCTTGTGGACTTTTCCCTAATCTTTGTAATGGCAGTCAAGAACAAAGAGACCTGCAGCTGAACATCCCGTGCCGGAGCATGGAAGCAAGCAACCAAGAGCATCATCTACTACCAACGCTTCAAATTGAGGTTAGGCGGACATTTTCTTCCAACAATGTAGAATCTGTTGTACGTTGTGAAAGATGTGTCCTGTATAATGCAAGCGAATTGCCTGCTCACTGAAGAACAAACAGGTCGGCCCCGACATTTAAATGCTGTATATAGATTTTACTCCTACTAAGATTGTCCTAAACTCAGCCACTGCATATTGTTCTCAATATCATAAACTTGGTTCAAGTATTGTAACTATTTTGTCTCTAAATTTTCGAGTTTGATCTATATTGGTTATTGAGTTTTCAAATTTGTTTTGTTTCTGTTCTTGAACTTCAAAATATTTTAGTTTAATTGTTGACTTTATAAAAAATAGTTGACTTGAATCATGGGCTTACCATTTAGTAGAGGCATAATGCCTCTGTCTAACAGCC

mRNA sequence

TCCTCCTCCTCCTCCTCCTCCTCCTCGTTCTTGTAACACAAATTTCCCTCTGTAGATTTCGAACAATCAAAATATATTCAGCGGCGTTTTGATGGGGTCTATGCTCGGTGACCTGCCGTCATATGACCCTCACAACTTCAGCCAACTCCGACCCTCCGATCCTTCAACTCCTTCTAAGATGATTCCTGCAACCTATCATCCTACCCACAGTAGGACCCTTCCGCCACCAGATCAGGTTATAGATACTGATGCCAAAAATATACTCATACGCCACATTTATCAGCTTACAGAAGAGAAGTCAAGAACAAAGAGACCTGCAGCTGAACATCCCGTGCCGGAGCATGGAAGCAAGCAACCAAGAGCATCATCTACTACCAACGCTTCAAATTGAGGTTAGGCGGACATTTTCTTCCAACAATGTAGAATCTGTTGTACGTTGTGAAAGATGTGTCCTGTATAATGCAAGCGAATTGCCTGCTCACTGAAGAACAAACAGGTCGGCCCCGACATTTAAATGCTGTATATAGATTTTACTCCTACTAAGATTGTCCTAAACTCAGCCACTGCATATTGTTCTCAATATCATAAACTTGGTTCAAGTATTGTAACTATTTTGTCTCTAAATTTTCGAGTTTGATCTATATTGGTTATTGAGTTTTCAAATTTGTTTTGTTTCTGTTCTTGAACTTCAAAATATTTTAGTTTAATTGTTGACTTTATAAAAAATAGTTGACTTGAATCATGGGCTTACCATTTAGTAGAGGCATAATGCCTCTGTCTAACAGCC

Coding sequence (CDS)

ATGGGGTCTATGCTCGGTGACCTGCCGTCATATGACCCTCACAACTTCAGCCAACTCCGACCCTCCGATCCTTCAACTCCTTCTAAGATGATTCCTGCAACCTATCATCCTACCCACAGTAGGACCCTTCCGCCACCAGATCAGGTTATAGATACTGATGCCAAAAATATACTCATACGCCACATTTATCAGCTTACAGAAGAGAAGTCAAGAACAAAGAGACCTGCAGCTGAACATCCCGTGCCGGAGCATGGAAGCAAGCAACCAAGAGCATCATCTACTACCAACGCTTCAAATTGA

Protein sequence

MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIRHIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN
Homology
[Close]
BLAST of Carg16612 vs. NCBI nr
Match: XP_022928761.1 (DET1- and DDB1-associated protein 1-like [Cucurbita moschata] >XP_022970118.1 DET1- and DDB1-associated protein 1-like [Cucurbita maxima] >XP_023549696.1 DET1- and DDB1-associated protein 1-like [Cucurbita pepo subsp. pepo] >KAG7016992.1 DET1- and DDB1-associated protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 201.4 bits (511), Expect = 3.5e-48
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0 

Query: 1   MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIR 60
           MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIR
Sbjct: 1   MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIR 60

Query: 61  HIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN 100
           HIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN
Sbjct: 61  HIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN 99

[Close]
BLAST of Carg16612 vs. NCBI nr
Match: KAG6579532.1 (DET1- and DDB1-associated protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 195.7 bits (496), Expect = 1.9e-46
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0 

Query: 4   MLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIRHIY 63
           MLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIRHIY
Sbjct: 1   MLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIRHIY 60

Query: 64  QLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN 100
           QLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN
Sbjct: 61  QLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN 96

[Close]
BLAST of Carg16612 vs. NCBI nr
Match: XP_004143885.1 (DET1- and DDB1-associated protein 1 isoform X1 [Cucumis sativus] >XP_008437335.1 PREDICTED: DET1- and DDB1-associated protein 1 isoform X1 [Cucumis melo] >KGN50058.1 hypothetical protein Csa_000605 [Cucumis sativus])

HSP 1 Score: 186.4 bits (472), Expect = 1.2e-43
Identity = 93/99 (93.94%), Postives = 96/99 (96.97%), Query Frame = 0 

Query: 1   MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIR 60
           MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVI+T+AKNILIR
Sbjct: 1   MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIR 60

Query: 61  HIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN 100
           HIYQ TEEKSRTKRPAAEHP+PEHGSKQPRA STTN SN
Sbjct: 61  HIYQHTEEKSRTKRPAAEHPMPEHGSKQPRA-STTNTSN 98

[Close]
BLAST of Carg16612 vs. NCBI nr
Match: XP_038906812.1 (DET1- and DDB1-associated protein 1 isoform X1 [Benincasa hispida])

HSP 1 Score: 185.7 bits (470), Expect = 2.0e-43
Identity = 93/99 (93.94%), Postives = 95/99 (95.96%), Query Frame = 0 

Query: 1   MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIR 60
           MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVI+T+AKNILIR
Sbjct: 1   MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIR 60

Query: 61  HIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN 100
           HIYQ TEEKSRTKRPAAEHP PEHGSKQPRASS TN SN
Sbjct: 61  HIYQHTEEKSRTKRPAAEHPAPEHGSKQPRASS-TNTSN 98

[Close]
BLAST of Carg16612 vs. NCBI nr
Match: XP_022157123.1 (DET1- and DDB1-associated protein 1 isoform X1 [Momordica charantia])

HSP 1 Score: 184.9 bits (468), Expect = 3.4e-43
Identity = 93/99 (93.94%), Postives = 95/99 (95.96%), Query Frame = 0 

Query: 1   MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIR 60
           MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVI+T+AKNILIR
Sbjct: 1   MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIR 60

Query: 61  HIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN 100
           HIYQ T EKSRTKRPAAEHPVPEHGSKQPRA STTN SN
Sbjct: 61  HIYQHTGEKSRTKRPAAEHPVPEHGSKQPRA-STTNTSN 98

[Close]
BLAST of Carg16612 vs. ExPASy Swiss-Prot
Match: Q9FFS4 (DET1- and DDB1-associated protein 1 OS=Arabidopsis thaliana OX=3702 GN=DDA1 PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.0e-30
Identity = 65/98 (66.33%), Postives = 78/98 (79.59%), Query Frame = 0 

Query: 1  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIR 60
          M S+LGDLPS+DPHNFSQ RPSDPS PSKM+P TY PTH+RTLPPPDQVI T+ KNILIR
Sbjct: 1  MASILGDLPSFDPHNFSQHRPSDPSNPSKMVPTTYRPTHNRTLPPPDQVITTEVKNILIR 60

Query: 61 HIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNAS 99
            YQ  EEK R KRPA +H   EH +K  RA+S+++++
Sbjct: 61 SFYQRAEEKLRPKRPATDHLAAEHVNKHFRAASSSSST 98

[Close]
BLAST of Carg16612 vs. ExPASy TrEMBL
Match: A0A6J1I2X6 (DET1- and DDB1-associated protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111469107 PE=3 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.7e-48
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0 

Query: 1   MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIR 60
           MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIR
Sbjct: 1   MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIR 60

Query: 61  HIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN 100
           HIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN
Sbjct: 61  HIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN 99

[Close]
BLAST of Carg16612 vs. ExPASy TrEMBL
Match: A0A6J1EL76 (DET1- and DDB1-associated protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111435586 PE=3 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.7e-48
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0 

Query: 1   MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIR 60
           MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIR
Sbjct: 1   MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIR 60

Query: 61  HIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN 100
           HIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN
Sbjct: 61  HIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN 99

[Close]
BLAST of Carg16612 vs. ExPASy TrEMBL
Match: A0A0A0KKG6 (DET1- and DDB1-associated protein 1 OS=Cucumis sativus OX=3659 GN=Csa_5G152230 PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 5.7e-44
Identity = 93/99 (93.94%), Postives = 96/99 (96.97%), Query Frame = 0 

Query: 1   MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIR 60
           MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVI+T+AKNILIR
Sbjct: 1   MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIR 60

Query: 61  HIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN 100
           HIYQ TEEKSRTKRPAAEHP+PEHGSKQPRA STTN SN
Sbjct: 61  HIYQHTEEKSRTKRPAAEHPMPEHGSKQPRA-STTNTSN 98

[Close]
BLAST of Carg16612 vs. ExPASy TrEMBL
Match: A0A1S3AUC0 (DET1- and DDB1-associated protein 1 OS=Cucumis melo OX=3656 GN=LOC103482787 PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 5.7e-44
Identity = 93/99 (93.94%), Postives = 96/99 (96.97%), Query Frame = 0 

Query: 1   MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIR 60
           MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVI+T+AKNILIR
Sbjct: 1   MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIR 60

Query: 61  HIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN 100
           HIYQ TEEKSRTKRPAAEHP+PEHGSKQPRA STTN SN
Sbjct: 61  HIYQHTEEKSRTKRPAAEHPMPEHGSKQPRA-STTNTSN 98

[Close]
BLAST of Carg16612 vs. ExPASy TrEMBL
Match: A0A6J1DSK3 (DET1- and DDB1-associated protein 1 OS=Momordica charantia OX=3673 GN=LOC111023922 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.6e-43
Identity = 93/99 (93.94%), Postives = 95/99 (95.96%), Query Frame = 0 

Query: 1   MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIR 60
           MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVI+T+AKNILIR
Sbjct: 1   MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIR 60

Query: 61  HIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN 100
           HIYQ T EKSRTKRPAAEHPVPEHGSKQPRA STTN SN
Sbjct: 61  HIYQHTGEKSRTKRPAAEHPVPEHGSKQPRA-STTNTSN 98

[Close]
BLAST of Carg16612 vs. TAIR 10
Match: AT5G41560.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin ligase, Det1/DDB1-complexing (InterPro:IPR018276); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 132.9 bits (333), Expect = 1.4e-31
Identity = 65/98 (66.33%), Postives = 78/98 (79.59%), Query Frame = 0 

Query: 1  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIR 60
          M S+LGDLPS+DPHNFSQ RPSDPS PSKM+P TY PTH+RTLPPPDQVI T+ KNILIR
Sbjct: 1  MASILGDLPSFDPHNFSQHRPSDPSNPSKMVPTTYRPTHNRTLPPPDQVITTEVKNILIR 60

Query: 61 HIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNAS 99
            YQ  EEK R KRPA +H   EH +K  RA+S+++++
Sbjct: 61 SFYQRAEEKLRPKRPATDHLAAEHVNKHFRAASSSSST 98

The following BLAST results are available for this feature:
BLAST of Carg16612 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022928761.13.5e-48100.00DET1- and DDB1-associated protein 1-like [Cucurbita moschata] >XP_022970118.1 DE... [more]
KAG6579532.11.9e-46100.00DET1- and DDB1-associated protein 1, partial [Cucurbita argyrosperma subsp. soro... [more]
XP_004143885.11.2e-4393.94DET1- and DDB1-associated protein 1 isoform X1 [Cucumis sativus] >XP_008437335.1... [more]
XP_038906812.12.0e-4393.94DET1- and DDB1-associated protein 1 isoform X1 [Benincasa hispida][more]
XP_022157123.13.4e-4393.94DET1- and DDB1-associated protein 1 isoform X1 [Momordica charantia][more]
BLAST of Carg16612 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FFS42.0e-3066.33DET1- and DDB1-associated protein 1 OS=Arabidopsis thaliana OX=3702 GN=DDA1 PE=1... [more]
BLAST of Carg16612 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1I2X61.7e-48100.00DET1- and DDB1-associated protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111469107 ... [more]
A0A6J1EL761.7e-48100.00DET1- and DDB1-associated protein 1 OS=Cucurbita moschata OX=3662 GN=LOC11143558... [more]
A0A0A0KKG65.7e-4493.94DET1- and DDB1-associated protein 1 OS=Cucumis sativus OX=3659 GN=Csa_5G152230 P... [more]
A0A1S3AUC05.7e-4493.94DET1- and DDB1-associated protein 1 OS=Cucumis melo OX=3656 GN=LOC103482787 PE=3... [more]
A0A6J1DSK31.6e-4393.94DET1- and DDB1-associated protein 1 OS=Momordica charantia OX=3673 GN=LOC1110239... [more]
BLAST of Carg16612 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G41560.11.4e-3166.33FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018276DET1- and DDB1-associated protein 1, N-terminalPFAMPF10172DDA1coord: 3..67
e-value: 3.7E-28
score: 97.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..99
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..35
NoneNo IPR availablePANTHERPTHR31879:SF8DET1- AND DDB1-ASSOCIATED PROTEIN 1coord: 1..94
IPR033575DET1- and DDB1-associated protein 1PANTHERPTHR31879DET1- AND DDB1-ASSOCIATED PROTEIN 1coord: 1..94

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg16612-RACarg16612-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009788 negative regulation of abscisic acid-activated signaling pathway
biological_process GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process
biological_process GO:0032434 regulation of proteasomal ubiquitin-dependent protein catabolic process
cellular_component GO:0080008 Cul4-RING E3 ubiquitin ligase complex
cellular_component GO:0005634 nucleus