Carg16528 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16528
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	MYB transcription factor
Location	Carg_Chr14: 13245078 .. 13245987 (+)
RNA-Seq Expression	Carg16528
Synteny	Carg16528

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTAACTTGAGAGCAATGGTAGGCCATTGGAGTTGGGGTTTGGTGGAAGATGAAGTTTGGAGGAAGGGACCTTGGACTGCTGAGGAAGACAGGTTGCTTATGGAATATGTCAGGATATATGGTGAAGGAAGATGGAATTCCGTGGCTCGGCTTACAGGTAACTTTTTGTTCGTTCTTGAAAACGTCATTCTGGGTCTTGATACCCAAAACTGATCTTTTTATGGCGTTTTTACTTAGGATTGAAGAGAAATGGAAAGAGTTGCAGACTGAGATGGGTGAACTATCTAAGGCCGGACTTGAAGAGAGGACAAATAACCCCACATGAAGAGAGCGTAATTCTCGAGCTTCATGCTAGATGGGGCAACAGGTACCTTCTGAGTTCAATCTCTCGTGTCAGTAAAGATGTTCGTTTGTGTTCCTTTGAACCAATTCGACTTACTAACTATGAAACGTTTGGCTCAGATGGTCAATGATTGCTCGGAGCTTACCAGGACGAACGGATAACGAAATAAAGAATTACTGGAGGACCCATTTCAAGAAAAAGGAAAAGGACAGTTCTGATGCGAATGGGAAAGCAAAAGCTCGCCTTCTCAGAAGGCAGCAATTTCATCAGCAACAACTGCAGCAGCAGCAGCAGCAGCAATACAACCCAATGGACATGAACAAAATCATGGCTCTACTAGAAGAAGAACACGACAAAAACAACATATCAGAAGCTTTGTCTTCCTCTGCTTCAGAGACAGAGAAGAGACAAAACATCACAAATTTCCACTCACAAACAGCTAACAATGAACAGAGTCTACTCTCTGAGCTCAATACCAATGGCTTTGTTCTACCTGAGATATTGAATGAAGGGCTCGAAGTGGGATGGGCTATGGAGCTTGGTGGGTGTCCATGGCAATGGTAG

mRNA sequence

ATGTTTAACTTGAGAGCAATGGTAGGCCATTGGAGTTGGGGTTTGGTGGAAGATGAAGTTTGGAGGAAGGGACCTTGGACTGCTGAGGAAGACAGGTTGCTTATGGAATATGTCAGGATATATGGTGAAGGAAGATGGAATTCCGTGGCTCGGCTTACAGGATTGAAGAGAAATGGAAAGAGTTGCAGACTGAGATGGGTGAACTATCTAAGGCCGGACTTGAAGAGAGGACAAATAACCCCACATGAAGAGAGCGTAATTCTCGAGCTTCATGCTAGATGGGGCAACAGATGGTCAATGATTGCTCGGAGCTTACCAGGACGAACGGATAACGAAATAAAGAATTACTGGAGGACCCATTTCAAGAAAAAGGAAAAGGACAGTTCTGATGCGAATGGGAAAGCAAAAGCTCGCCTTCTCAGAAGGCAGCAATTTCATCAGCAACAACTGCAGCAGCAGCAGCAGCAGCAATACAACCCAATGGACATGAACAAAATCATGGCTCTACTAGAAGAAGAACACGACAAAAACAACATATCAGAAGCTTTGTCTTCCTCTGCTTCAGAGACAGAGAAGAGACAAAACATCACAAATTTCCACTCACAAACAGCTAACAATGAACAGAGTCTACTCTCTGAGCTCAATACCAATGGCTTTGTTCTACCTGAGATATTGAATGAAGGGCTCGAAGTGGGATGGGCTATGGAGCTTGGTGGGTGTCCATGGCAATGGTAG

Coding sequence (CDS)

ATGTTTAACTTGAGAGCAATGGTAGGCCATTGGAGTTGGGGTTTGGTGGAAGATGAAGTTTGGAGGAAGGGACCTTGGACTGCTGAGGAAGACAGGTTGCTTATGGAATATGTCAGGATATATGGTGAAGGAAGATGGAATTCCGTGGCTCGGCTTACAGGATTGAAGAGAAATGGAAAGAGTTGCAGACTGAGATGGGTGAACTATCTAAGGCCGGACTTGAAGAGAGGACAAATAACCCCACATGAAGAGAGCGTAATTCTCGAGCTTCATGCTAGATGGGGCAACAGATGGTCAATGATTGCTCGGAGCTTACCAGGACGAACGGATAACGAAATAAAGAATTACTGGAGGACCCATTTCAAGAAAAAGGAAAAGGACAGTTCTGATGCGAATGGGAAAGCAAAAGCTCGCCTTCTCAGAAGGCAGCAATTTCATCAGCAACAACTGCAGCAGCAGCAGCAGCAGCAATACAACCCAATGGACATGAACAAAATCATGGCTCTACTAGAAGAAGAACACGACAAAAACAACATATCAGAAGCTTTGTCTTCCTCTGCTTCAGAGACAGAGAAGAGACAAAACATCACAAATTTCCACTCACAAACAGCTAACAATGAACAGAGTCTACTCTCTGAGCTCAATACCAATGGCTTTGTTCTACCTGAGATATTGAATGAAGGGCTCGAAGTGGGATGGGCTATGGAGCTTGGTGGGTGTCCATGGCAATGGTAG

Protein sequence

MFNLRAMVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTHFKKKEKDSSDANGKAKARLLRRQQFHQQQLQQQQQQQYNPMDMNKIMALLEEEHDKNNISEALSSSASETEKRQNITNFHSQTANNEQSLLSELNTNGFVLPEILNEGLEVGWAMELGGCPWQW

Homology

[Close]

BLAST of Carg16528 vs. NCBI nr
Match: KAG7018824.1 (Transcription factor MYB59, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 498.4 bits (1282), Expect = 3.4e-137
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0


Query: 1   MFNLRAMVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGK 60
           MFNLRAMVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGK
Sbjct: 1   MFNLRAMVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGK 60

Query: 61  SCRLRWVNYLRPDLKRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTH 120
           SCRLRWVNYLRPDLKRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTH
Sbjct: 61  SCRLRWVNYLRPDLKRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTH 120

Query: 121 FKKKEKDSSDANGKAKARLLRRQQFHQQQLQQQQQQQYNPMDMNKIMALLEEEHDKNNIS 180
           FKKKEKDSSDANGKAKARLLRRQQFHQQQLQQQQQQQYNPMDMNKIMALLEEEHDKNNIS
Sbjct: 121 FKKKEKDSSDANGKAKARLLRRQQFHQQQLQQQQQQQYNPMDMNKIMALLEEEHDKNNIS 180

Query: 181 EALSSSASETEKRQNITNFHSQTANNEQSLLSELNTNGFVLPEILNEGLEVGWAMELGGC 240
           EALSSSASETEKRQNITNFHSQTANNEQSLLSELNTNGFVLPEILNEGLEVGWAMELGGC
Sbjct: 181 EALSSSASETEKRQNITNFHSQTANNEQSLLSELNTNGFVLPEILNEGLEVGWAMELGGC 240

Query: 241 PWQW 245
           PWQW
Sbjct: 241 PWQW 244

[Close]

BLAST of Carg16528 vs. NCBI nr
Match: XP_022924745.1 (transcription factor WER [Cucurbita moschata])

HSP 1 Score: 496.1 bits (1276), Expect = 1.7e-136
Identity = 242/244 (99.18%), Postives = 243/244 (99.59%), Query Frame = 0


Query: 1   MFNLRAMVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGK 60
           MFNLRAMVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGK
Sbjct: 1   MFNLRAMVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGK 60

Query: 61  SCRLRWVNYLRPDLKRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTH 120
           SCRLRWVNYLRPDLKRGQITPHEES+ILELHARWGNRWSMIARSLPGRTDNEIKNYWRTH
Sbjct: 61  SCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNRWSMIARSLPGRTDNEIKNYWRTH 120

Query: 121 FKKKEKDSSDANGKAKARLLRRQQFHQQQLQQQQQQQYNPMDMNKIMALLEEEHDKNNIS 180
           FKKKEKDSSDANGKAKARLLRRQQFHQQQLQQQQQQQYNPMDMNKIMALLEEEHDKNNIS
Sbjct: 121 FKKKEKDSSDANGKAKARLLRRQQFHQQQLQQQQQQQYNPMDMNKIMALLEEEHDKNNIS 180

Query: 181 EALSSSASETEKRQNITNFHSQTANNEQSLLSELNTNGFVLPEILNEGLEVGWAMELGGC 240
           EALSSSASETEKRQN TNFHSQTANNEQSLLSELNTNGFVLPEILNEGLEVGWAMELGGC
Sbjct: 181 EALSSSASETEKRQNTTNFHSQTANNEQSLLSELNTNGFVLPEILNEGLEVGWAMELGGC 240

Query: 241 PWQW 245
           PWQW
Sbjct: 241 PWQW 244

[Close]

BLAST of Carg16528 vs. NCBI nr
Match: XP_022980389.1 (transcription factor WER [Cucurbita maxima])

HSP 1 Score: 492.3 bits (1266), Expect = 2.5e-135
Identity = 242/244 (99.18%), Postives = 243/244 (99.59%), Query Frame = 0


Query: 1   MFNLRAMVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGK 60
           MFNLRAMVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGK
Sbjct: 1   MFNLRAMVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGK 60

Query: 61  SCRLRWVNYLRPDLKRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTH 120
           SCRLRWVNYLRPDLKRGQITPHEES+ILELHARWGNRWSMIARSLPGRTDNEIKNYWRTH
Sbjct: 61  SCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNRWSMIARSLPGRTDNEIKNYWRTH 120

Query: 121 FKKKEKDSSDANGKAKARLLRRQQFHQQQLQQQQQQQYNPMDMNKIMALLEEEHDKNNIS 180
           FKKKEKDSSDANGKAKARLLRRQQFHQQQL QQQQQQYNPMDMNKIMALLEEEHDKNNIS
Sbjct: 121 FKKKEKDSSDANGKAKARLLRRQQFHQQQL-QQQQQQYNPMDMNKIMALLEEEHDKNNIS 180

Query: 181 EALSSSASETEKRQNITNFHSQTANNEQSLLSELNTNGFVLPEILNEGLEVGWAMELGGC 240
           EALSSSASETEKRQNITNFHSQTANNEQSLLSELNTNGFVLPEILNEGLEVGWAMELGGC
Sbjct: 181 EALSSSASETEKRQNITNFHSQTANNEQSLLSELNTNGFVLPEILNEGLEVGWAMELGGC 240

Query: 241 PWQW 245
           PWQW
Sbjct: 241 PWQW 243

[Close]

BLAST of Carg16528 vs. NCBI nr
Match: KAG6582426.1 (Transcription factor MYB59, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 481.9 bits (1239), Expect = 3.3e-132
Identity = 238/239 (99.58%), Postives = 238/239 (99.58%), Query Frame = 0


Query: 7   MVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGKSCRLRW 66
           MVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGKSCRLRW
Sbjct: 1   MVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGKSCRLRW 60

Query: 67  VNYLRPDLKRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTHFKKKEK 126
           VNYLRPDLKRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTHFKKKEK
Sbjct: 61  VNYLRPDLKRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTHFKKKEK 120

Query: 127 DSSDANGKAKARLLRRQQFHQQQL-QQQQQQQYNPMDMNKIMALLEEEHDKNNISEALSS 186
           DSSDANGKAKARLLRRQQFHQQQL QQQQQQQYNPMDMNKIMALLEEEHDKNNISEALSS
Sbjct: 121 DSSDANGKAKARLLRRQQFHQQQLQQQQQQQQYNPMDMNKIMALLEEEHDKNNISEALSS 180

Query: 187 SASETEKRQNITNFHSQTANNEQSLLSELNTNGFVLPEILNEGLEVGWAMELGGCPWQW 245
           SASETEKRQNITNFHSQTANNEQSLLSELNTNGFVLPEILNEGLEVGWAMELGGCPWQW
Sbjct: 181 SASETEKRQNITNFHSQTANNEQSLLSELNTNGFVLPEILNEGLEVGWAMELGGCPWQW 239

[Close]

BLAST of Carg16528 vs. NCBI nr
Match: XP_023528479.1 (transcription factor WER [Cucurbita pepo subsp. pepo])

HSP 1 Score: 480.7 bits (1236), Expect = 7.4e-132
Identity = 239/244 (97.95%), Postives = 241/244 (98.77%), Query Frame = 0


Query: 1   MFNLRAMVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGK 60
           MFNLRAMVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGK
Sbjct: 1   MFNLRAMVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGK 60

Query: 61  SCRLRWVNYLRPDLKRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTH 120
           SCRLRWVNYLRPDLKRGQITPHEES+ILELHARWGNRWSMIARSLPGRTDNEIKNYWRTH
Sbjct: 61  SCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNRWSMIARSLPGRTDNEIKNYWRTH 120

Query: 121 FKKKEKDSSDANGKAKARLLRRQQFHQQQLQQQQQQQYNPMDMNKIMALLEEEHDKNNIS 180
           FKKKEKDSSDANGKAKARLLRRQQFHQQQL QQQQQQYNPMDMNKIMALL EEHDKNNIS
Sbjct: 121 FKKKEKDSSDANGKAKARLLRRQQFHQQQL-QQQQQQYNPMDMNKIMALL-EEHDKNNIS 180

Query: 181 EALSSSASETEKRQNITNFHSQTANNEQSLLSELNTNGFVLPEILNEGLEVGWAMELGGC 240
           EALSSSASETEKRQNITNFHSQTANNEQSLLSELNTNGFVLPE+LNEGLEVGWAMELGG 
Sbjct: 181 EALSSSASETEKRQNITNFHSQTANNEQSLLSELNTNGFVLPEMLNEGLEVGWAMELGGY 240

Query: 241 PWQW 245
           PWQW
Sbjct: 241 PWQW 242

[Close]

BLAST of Carg16528 vs. ExPASy Swiss-Prot
Match: Q4JL84 (Transcription factor MYB59 OS=Arabidopsis thaliana OX=3702 GN=MYB59 PE=2 SV=2)

HSP 1 Score: 174.5 bits (441), Expect = 1.5e-42
Identity = 75/113 (66.37%), Postives = 96/113 (84.96%), Query Frame = 0


Query: 15  LVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGKSCRLRWVNYLRPDL 74
           LV++E +RKGPWT +ED LL+ +V ++G+ RW+ VA+++GL R GKSCRLRWVNYL P L
Sbjct: 3   LVQEE-YRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGL 62

Query: 75  KRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTHFKKKEKD 128
           KRG++TP EE ++LELHA+WGNRWS IAR LPGRTDNEIKNYWRTH +KK ++
Sbjct: 63  KRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQE 114

[Close]

BLAST of Carg16528 vs. ExPASy Swiss-Prot
Match: Q9LX82 (Transcription factor MYB48 OS=Arabidopsis thaliana OX=3702 GN=MYB48 PE=2 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 3.3e-42
Identity = 72/113 (63.72%), Postives = 95/113 (84.07%), Query Frame = 0


Query: 15  LVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGKSCRLRWVNYLRPDL 74
           ++++E  RKGPWT +ED LL+ +V ++G+ RW+ +A+++GL R GKSCRLRWVNYL P L
Sbjct: 1   MMQEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 60

Query: 75  KRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTHFKKKEKD 128
           KRG++TP EE ++LELHA+WGNRWS IAR LPGRTDNEIKNYWRTH +KK ++
Sbjct: 61  KRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQE 113

[Close]

BLAST of Carg16528 vs. ExPASy Swiss-Prot
Match: P81391 (Myb-related protein 305 OS=Antirrhinum majus OX=4151 GN=MYB305 PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.6e-41
Identity = 73/107 (68.22%), Postives = 89/107 (83.18%), Query Frame = 0


Query: 17  EDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGKSCRLRWVNYLRPDLKR 76
           +D   RKGPWT EED +L+ Y+  +GEG WNS+AR  GLKR GKSCRLRW+NYLRPD++R
Sbjct: 9   QDVEVRKGPWTMEEDLILINYIANHGEGVWNSLARSAGLKRTGKSCRLRWLNYLRPDVRR 68

Query: 77  GQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTHFKK 124
           G ITP E+ +I+ELHA+WGNRWS IA++LPGRTDNEIKNYWRT  +K
Sbjct: 69  GNITPEEQLLIMELHAKWGNRWSKIAKTLPGRTDNEIKNYWRTRIQK 115

[Close]

BLAST of Carg16528 vs. ExPASy Swiss-Prot
Match: Q4JL76 (Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS2 PE=2 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 2.1e-41
Identity = 80/134 (59.70%), Postives = 103/134 (76.87%), Query Frame = 0


Query: 16  VEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGKSCRLRWVNYLRPDLK 75
           V +E+ RKGPWT +ED  L+  VR++GE RW+ +A+++GL R GKSCRLRWVNYL P LK
Sbjct: 4   VREEI-RKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLK 63

Query: 76  RGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTHFKKKEKD-SSDANGK 135
           RG+++PHEE +ILELHARWGNRWS IAR LPGRTDNEIKNYWRTH +KK ++  S+ +  
Sbjct: 64  RGRMSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERKSNMSPS 123

Query: 136 AKARLLRRQQFHQQ 149
           + +  L  Q  H +
Sbjct: 124 SSSSSLTYQSCHPE 136

[Close]

BLAST of Carg16528 vs. ExPASy Swiss-Prot
Match: Q10MB4 (Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.8e-41
Identity = 86/144 (59.72%), Postives = 101/144 (70.14%), Query Frame = 0


Query: 22  RKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGKSCRLRWVNYLRPDLKRGQITP 81
           R+GPWT EED LL+ Y+  +GEGRWNS+AR  GLKR GKSCRLRW+NYLRPDL+RG ITP
Sbjct: 21  RRGPWTVEEDLLLVNYIAAHGEGRWNSLARSAGLKRTGKSCRLRWLNYLRPDLRRGNITP 80

Query: 82  HEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTHFKKKEKD-SSDANGKA----- 141
            E+ +ILELH+RWGNRWS IA+ LPGRTDNEIKNYWRT  +K  K    D N +      
Sbjct: 81  QEQLLILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSQQFKDVM 140

Query: 142 ----KARLLRRQQFHQQQLQQQQQ 156
                 RL+ R Q      QQQQ+
Sbjct: 141 RYLWMPRLVERIQAAAAGQQQQQE 164

[Close]

BLAST of Carg16528 vs. ExPASy TrEMBL
Match: A0A6J1EFX6 (transcription factor WER OS=Cucurbita moschata OX=3662 GN=LOC111432153 PE=4 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 8.2e-137
Identity = 242/244 (99.18%), Postives = 243/244 (99.59%), Query Frame = 0


Query: 1   MFNLRAMVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGK 60
           MFNLRAMVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGK
Sbjct: 1   MFNLRAMVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGK 60

Query: 61  SCRLRWVNYLRPDLKRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTH 120
           SCRLRWVNYLRPDLKRGQITPHEES+ILELHARWGNRWSMIARSLPGRTDNEIKNYWRTH
Sbjct: 61  SCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNRWSMIARSLPGRTDNEIKNYWRTH 120

Query: 121 FKKKEKDSSDANGKAKARLLRRQQFHQQQLQQQQQQQYNPMDMNKIMALLEEEHDKNNIS 180
           FKKKEKDSSDANGKAKARLLRRQQFHQQQLQQQQQQQYNPMDMNKIMALLEEEHDKNNIS
Sbjct: 121 FKKKEKDSSDANGKAKARLLRRQQFHQQQLQQQQQQQYNPMDMNKIMALLEEEHDKNNIS 180

Query: 181 EALSSSASETEKRQNITNFHSQTANNEQSLLSELNTNGFVLPEILNEGLEVGWAMELGGC 240
           EALSSSASETEKRQN TNFHSQTANNEQSLLSELNTNGFVLPEILNEGLEVGWAMELGGC
Sbjct: 181 EALSSSASETEKRQNTTNFHSQTANNEQSLLSELNTNGFVLPEILNEGLEVGWAMELGGC 240

Query: 241 PWQW 245
           PWQW
Sbjct: 241 PWQW 244

[Close]

BLAST of Carg16528 vs. ExPASy TrEMBL
Match: A0A6J1IZ55 (transcription factor WER OS=Cucurbita maxima OX=3661 GN=LOC111479769 PE=4 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 1.2e-135
Identity = 242/244 (99.18%), Postives = 243/244 (99.59%), Query Frame = 0


Query: 1   MFNLRAMVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGK 60
           MFNLRAMVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGK
Sbjct: 1   MFNLRAMVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGK 60

Query: 61  SCRLRWVNYLRPDLKRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTH 120
           SCRLRWVNYLRPDLKRGQITPHEES+ILELHARWGNRWSMIARSLPGRTDNEIKNYWRTH
Sbjct: 61  SCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNRWSMIARSLPGRTDNEIKNYWRTH 120

Query: 121 FKKKEKDSSDANGKAKARLLRRQQFHQQQLQQQQQQQYNPMDMNKIMALLEEEHDKNNIS 180
           FKKKEKDSSDANGKAKARLLRRQQFHQQQL QQQQQQYNPMDMNKIMALLEEEHDKNNIS
Sbjct: 121 FKKKEKDSSDANGKAKARLLRRQQFHQQQL-QQQQQQYNPMDMNKIMALLEEEHDKNNIS 180

Query: 181 EALSSSASETEKRQNITNFHSQTANNEQSLLSELNTNGFVLPEILNEGLEVGWAMELGGC 240
           EALSSSASETEKRQNITNFHSQTANNEQSLLSELNTNGFVLPEILNEGLEVGWAMELGGC
Sbjct: 181 EALSSSASETEKRQNITNFHSQTANNEQSLLSELNTNGFVLPEILNEGLEVGWAMELGGC 240

Query: 241 PWQW 245
           PWQW
Sbjct: 241 PWQW 243

[Close]

BLAST of Carg16528 vs. ExPASy TrEMBL
Match: A0A1S3AW20 (transcription factor MYB24-like OS=Cucumis melo OX=3656 GN=LOC103483536 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 6.3e-121
Identity = 221/250 (88.40%), Postives = 233/250 (93.20%), Query Frame = 0


Query: 1   MFNLRAMVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGK 60
           MFNLR MVGHWSWGL+EDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARL GLKRNGK
Sbjct: 45  MFNLRTMVGHWSWGLMEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLAGLKRNGK 104

Query: 61  SCRLRWVNYLRPDLKRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTH 120
           SCRLRWVNYLRPDLKRGQITPHEES+ILELHARWGNRWS IARSLPGRTDNEIKNYWRTH
Sbjct: 105 SCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTH 164

Query: 121 FKKKEKDSSDANGKAKARLLRRQQFHQQQL---QQQQQQQYNPMDMNKIMALLEEEH-DK 180
           FKKK KDSSDANGKAKARLLRRQQFHQQQL   QQQQQQQ+NPM+MNKIMALLEE+H DK
Sbjct: 165 FKKKVKDSSDANGKAKARLLRRQQFHQQQLQQQQQQQQQQFNPMEMNKIMALLEEQHDDK 224

Query: 181 NNISEAL--SSSASETEKRQNITNFHSQTANNEQSLLSELNTNGFVLPEILNEGLEVGWA 240
           NN  E L  SSSASE EK+QNITNF++QT +NEQSL+SELN NGFVLPE+LNEGL+VGWA
Sbjct: 225 NNKLETLSSSSSASEAEKKQNITNFYTQTTDNEQSLISELNNNGFVLPEMLNEGLDVGWA 284

Query: 241 MELGGCPWQW 245
           MELGG PWQW
Sbjct: 285 MELGGYPWQW 294

[Close]

BLAST of Carg16528 vs. ExPASy TrEMBL
Match: A0A5D3D065 (Transcription factor MYB24-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002140 PE=4 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 8.6e-118
Identity = 216/244 (88.52%), Postives = 228/244 (93.44%), Query Frame = 0


Query: 7   MVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGKSCRLRW 66
           MVGHWSWGL+EDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARL GLKRNGKSCRLRW
Sbjct: 1   MVGHWSWGLMEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLAGLKRNGKSCRLRW 60

Query: 67  VNYLRPDLKRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTHFKKKEK 126
           VNYLRPDLKRGQITPHEES+ILELHARWGNRWS IARSLPGRTDNEIKNYWRTHFKKK K
Sbjct: 61  VNYLRPDLKRGQITPHEESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKVK 120

Query: 127 DSSDANGKAKARLLRRQQFHQQQL---QQQQQQQYNPMDMNKIMALLEEEH-DKNNISEA 186
           DSSDANGKAKARLLRRQQFHQQQL   QQQQQQQ+NPM+MNKIMALLEE+H DKNN  E 
Sbjct: 121 DSSDANGKAKARLLRRQQFHQQQLQQQQQQQQQQFNPMEMNKIMALLEEQHDDKNNKLET 180

Query: 187 L--SSSASETEKRQNITNFHSQTANNEQSLLSELNTNGFVLPEILNEGLEVGWAMELGGC 245
           L  SSSASE EK+QNITNF++QT +NEQSL+SELN NGFVLPE+LNEGL+VGWAMELGG 
Sbjct: 181 LSSSSSASEAEKKQNITNFYTQTTDNEQSLISELNNNGFVLPEMLNEGLDVGWAMELGGY 240

[Close]

BLAST of Carg16528 vs. ExPASy TrEMBL
Match: A0A6J1DZP3 (transcription factor MYB57-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024574 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.8e-92
Identity = 177/240 (73.75%), Postives = 205/240 (85.42%), Query Frame = 0


Query: 1   MFNLRAMVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGK 60
           MFNL  MVGHW WG++EDEVWRKGPWTAEED+LL EYVRIYGEGRWNSVARL GLKRNGK
Sbjct: 1   MFNLGTMVGHWGWGVMEDEVWRKGPWTAEEDKLLTEYVRIYGEGRWNSVARLAGLKRNGK 60

Query: 61  SCRLRWVNYLRPDLKRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTH 120
           SCRLRWVNYLRPDLKRGQITPHEE++IL+LHARWGNRWS IARSLPGRTDNEIKNYWRTH
Sbjct: 61  SCRLRWVNYLRPDLKRGQITPHEETIILQLHARWGNRWSTIARSLPGRTDNEIKNYWRTH 120

Query: 121 FKKKEKDSSDANGKAKARLLRRQQFHQQQLQQQQQQQYNPMDMNKIMALLEEEHDKNNIS 180
           FKKK KD  D NGKAK+RLLRRQQFHQQQL  QQQQQ+N ++ +K  A+L EEHD NN  
Sbjct: 121 FKKKAKDPCDVNGKAKSRLLRRQQFHQQQL--QQQQQFNALETSKFKAVL-EEHD-NNKE 180

Query: 181 EALSSSASETE-KRQNITNFHSQTANN-EQSLLSELNTNGFVLPEILNEGL--EVGWAME 237
            + SSSASE E  +  +TNFHSQ ++  E+SL+SELN++GF+LPE+L++G   +  W++E
Sbjct: 181 ASTSSSASEAEIMKPELTNFHSQASDQYEESLVSELNSHGFLLPEVLSDGFLWDGLWSLE 236

[Close]

BLAST of Carg16528 vs. TAIR 10
Match: AT3G24310.1 (myb domain protein 305 )

HSP 1 Score: 255.4 bits (651), Expect = 4.7e-68
Identity = 141/223 (63.23%), Postives = 170/223 (76.23%), Query Frame = 0


Query: 13  WGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGKSCRLRWVNYLRP 72
           WG+VE E WRKGPWTAEEDRLL++YV+++GEGRWNSVARL GLKRNGKSCRLRWVNYLRP
Sbjct: 11  WGMVE-EGWRKGPWTAEEDRLLIDYVQLHGEGRWNSVARLAGLKRNGKSCRLRWVNYLRP 70

Query: 73  DLKRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTHFKKKEKDSSDAN 132
           DLKRGQITPHEE++ILELHA+WGNRWS IARSLPGRTDNEIKNYWRTHFKKK K  +++ 
Sbjct: 71  DLKRGQITPHEETIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKTKSPTNSA 130

Query: 133 GKAKARLLRRQQFHQQ---QLQQQQQ-QQYNPMDMNKIMALLEEEHDKNNISEALSSSAS 192
            K K R+L+RQQF QQ   +LQQ+QQ  Q+N +DM KIM+LL++  D NN     SSS+S
Sbjct: 131 EKTKNRILKRQQFQQQRQMELQQEQQLLQFNQIDMKKIMSLLDD--DNNNGDNTFSSSSS 190

Query: 193 ETEKRQNITN--FHSQTANNEQSLLSELNTNGF--VLPEILNE 228
                  + +   HS T +       E N+NG+  V+P  + E
Sbjct: 191 GESGALYVPHQITHSTTTSG-----CEPNSNGYYPVVPVTIPE 225

[Close]

BLAST of Carg16528 vs. TAIR 10
Match: AT4G13480.1 (myb domain protein 79 )

HSP 1 Score: 243.0 bits (619), Expect = 2.4e-64
Identity = 129/201 (64.18%), Postives = 153/201 (76.12%), Query Frame = 0


Query: 18  DEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGKSCRLRWVNYLRPDLKRG 77
           +EVWRKGPWTAEEDRLL+EYVR++GEGRWNSV++L GLKRNGKSCRLRWVNYLRPDLKRG
Sbjct: 3   EEVWRKGPWTAEEDRLLIEYVRVHGEGRWNSVSKLAGLKRNGKSCRLRWVNYLRPDLKRG 62

Query: 78  QITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTHFKKKEKDSSDANGKAKA 137
           QITPHEES+ILELHA+WGNRWS IARSLPGRTDNEIKNYWRTHFKKK K +++   K K+
Sbjct: 63  QITPHEESIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAKPTTNNAEKIKS 122

Query: 138 RLLRRQQFHQQ---QLQQQQQQ-QYNPMDMNKIMALLEEEHDKNNISEALSSSASETEKR 197
           RLL+RQ F +Q   +LQQ+QQ  Q++ + M KI++LLEE    NN S +           
Sbjct: 123 RLLKRQHFKEQREIELQQEQQLFQFDQLGMKKIISLLEE----NNSSSSSDGGGDVFYYP 182

Query: 198 QNITNFHSQTANNEQSLLSEL 215
             IT+       N  SL  +L
Sbjct: 183 DQITHSSKPFGYNSNSLEEQL 199

[Close]

BLAST of Carg16528 vs. TAIR 10
Match: AT3G30210.1 (myb domain protein 121 )

HSP 1 Score: 183.7 bits (465), Expect = 1.7e-46
Identity = 99/166 (59.64%), Postives = 120/166 (72.29%), Query Frame = 0


Query: 22  RKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGKSCRLRWVNYLRPDLKRGQITP 81
           RKGPWT EED+LL EYV  +GEGRW++VA+  GL R+GKSCRLRWVNYLRP LKRGQITP
Sbjct: 28  RKGPWTLEEDKLLAEYVTSHGEGRWSTVAKCAGLNRSGKSCRLRWVNYLRPGLKRGQITP 87

Query: 82  HEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTHFKKKEKDSSDANGKAKARLLR 141
            EE +ILELH+ WGN+WS IAR LPGRTDNEIKNYWRTH+KK +K SS  + K K  L R
Sbjct: 88  QEEGIILELHSLWGNKWSTIARYLPGRTDNEIKNYWRTHYKKNQKSSSKQD-KVKKSLSR 147

Query: 142 RQQFHQQQLQQQQQQQYNPMDMNKIMALLEEEH----DKNNISEAL 184
           +QQ  Q  L+ Q Q Q      N    L+ ++H    + +NI+ +L
Sbjct: 148 KQQ--QVDLKPQPQAQ----SENHQSQLVSQDHMNIDNDHNIASSL 186

[Close]

BLAST of Carg16528 vs. TAIR 10
Match: AT5G59780.3 (myb domain protein 59 )

HSP 1 Score: 174.5 bits (441), Expect = 1.1e-43
Identity = 75/113 (66.37%), Postives = 96/113 (84.96%), Query Frame = 0


Query: 15  LVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGKSCRLRWVNYLRPDL 74
           LV++E +RKGPWT +ED LL+ +V ++G+ RW+ VA+++GL R GKSCRLRWVNYL P L
Sbjct: 3   LVQEE-YRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGL 62

Query: 75  KRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTHFKKKEKD 128
           KRG++TP EE ++LELHA+WGNRWS IAR LPGRTDNEIKNYWRTH +KK ++
Sbjct: 63  KRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQE 114

[Close]

BLAST of Carg16528 vs. TAIR 10
Match: AT3G46130.1 (myb domain protein 48 )

HSP 1 Score: 173.3 bits (438), Expect = 2.4e-43
Identity = 72/113 (63.72%), Postives = 95/113 (84.07%), Query Frame = 0


Query: 15  LVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGKSCRLRWVNYLRPDL 74
           ++++E  RKGPWT +ED LL+ +V ++G+ RW+ +A+++GL R GKSCRLRWVNYL P L
Sbjct: 1   MMQEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 60

Query: 75  KRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTHFKKKEKD 128
           KRG++TP EE ++LELHA+WGNRWS IAR LPGRTDNEIKNYWRTH +KK ++
Sbjct: 61  KRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQE 113

The following BLAST results are available for this feature:

BLAST of Carg16528 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7018824.1	3.4e-137	100.00	Transcription factor MYB59, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022924745.1	1.7e-136	99.18	transcription factor WER [Cucurbita moschata]	[more]
XP_022980389.1	2.5e-135	99.18	transcription factor WER [Cucurbita maxima]	[more]
KAG6582426.1	3.3e-132	99.58	Transcription factor MYB59, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023528479.1	7.4e-132	97.95	transcription factor WER [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg16528 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4JL84	1.5e-42	66.37	Transcription factor MYB59 OS=Arabidopsis thaliana OX=3702 GN=MYB59 PE=2 SV=2	[more]
Q9LX82	3.3e-42	63.72	Transcription factor MYB48 OS=Arabidopsis thaliana OX=3702 GN=MYB48 PE=2 SV=1	[more]
P81391	1.6e-41	68.22	Myb-related protein 305 OS=Antirrhinum majus OX=4151 GN=MYB305 PE=2 SV=1	[more]
Q4JL76	2.1e-41	59.70	Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS2 PE...	[more]
Q10MB4	2.8e-41	59.72	Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 ...	[more]

BLAST of Carg16528 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EFX6	8.2e-137	99.18	transcription factor WER OS=Cucurbita moschata OX=3662 GN=LOC111432153 PE=4 SV=1	[more]
A0A6J1IZ55	1.2e-135	99.18	transcription factor WER OS=Cucurbita maxima OX=3661 GN=LOC111479769 PE=4 SV=1	[more]
A0A1S3AW20	6.3e-121	88.40	transcription factor MYB24-like OS=Cucumis melo OX=3656 GN=LOC103483536 PE=4 SV=...	[more]
A0A5D3D065	8.6e-118	88.52	Transcription factor MYB24-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1DZP3	2.8e-92	73.75	transcription factor MYB57-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC...	[more]

BLAST of Carg16528 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24310.1	4.7e-68	63.23	myb domain protein 305	[more]
AT4G13480.1	2.4e-64	64.18	myb domain protein 79	[more]
AT3G30210.1	1.7e-46	59.64	myb domain protein 121	[more]
AT5G59780.3	1.1e-43	66.37	myb domain protein 59	[more]
AT3G46130.1	2.4e-43	63.72	myb domain protein 48	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 136..156
None	No IPR available	GENE3D	1.10.10.60		coord: 80..124 e-value: 6.0E-19 score: 69.7
None	No IPR available	GENE3D	1.10.10.60		coord: 23..75 e-value: 9.7E-20 score: 72.3
None	No IPR available	PANTHER	PTHR45675:SF3	MYB-LIKE DNA-BINDING DOMAIN PROTEIN	coord: 14..198
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 75..123 e-value: 2.6E-13 score: 60.2 coord: 22..72 e-value: 9.2E-16 score: 68.4
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 71..121 score: 9.779049
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 22..70 score: 11.590583
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 25..70 e-value: 1.67173E-10 score: 52.963
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 80..121 e-value: 1.62804E-8 score: 47.5702
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 76..120 e-value: 1.2E-11 score: 44.6 coord: 23..70 e-value: 1.2E-15 score: 57.4
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 18..74 score: 24.910631
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 75..125 score: 20.623966
IPR044676	MYB-like transcription factor EOBI/EOBII-like, plant	PANTHER	PTHR45675	MYB TRANSCRIPTION FACTOR-RELATED-RELATED	coord: 14..198
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 22..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16528-RA	Carg16528-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding