Carg16496 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16496
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Trafficking protein particle complex subunit
Location	Carg_Chr12: 7951191 .. 7957412 (+)
RNA-Seq Expression	Carg16496
Synteny	Carg16496

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCGGAGTTGGGAAGGTCAAGCAGTATTCTAATGTCCTCGACAGACCTCTCAGCAAGGGCAAACAGGAGGTTGTTCCCCTTATCTCTACAGACTCTTGCTTATTTTTTTCTTGTGAAAAATTTCAGCTCTATACATGTTTTACCTCTGTGTGGACCAATTTGTTTAAATAGAACTCTTTAGTTCCTTGCTGGATTTTGCAGTTGCAATCTTGATATGTATGTTTAACTAAGTGAAAACGCAAGAGCTTGGCATATTATTTCTTTGCTGAGCTTGTAAGTTTGCATTGACTTGAACTTGATTTTTTTTTCCTTCTAAATTATATATCTTTTTGTATCTGGAACAGAATCCTTACAGCAGGGCATATTATTTCTAGAGACCCCTTATTAACGGTCATTTGATAATTCCAAGTGAATTTGAGCTACAATATGCATGTGACTTCATTTTAATTTGTTTATGTGTAGGTGAGTTTGAGTGCATTTGCATTCTTGTTCTCTGAACTCGTGCAATACAATCAGACTCAGGTTGACAACATTGCTGAGTTAGAACGAAGGTGATTTTTCATTTGGAGCTATTATATCTTAACCAACAACGATTCATCATCATGGTCTTTGTTTCTGTTGGAAAGGGGGTACAAAAATTAACAGGAGATGTACGTCAATAATGGCTAATGTTGTAGATTTGAAAATTCTTATGTTCATTTGATTGCACATTCTTTTTTTATTCTTTTCCTATATATATATATATCTCCAAAGGCCTGATTTAAGGAGAGGGGTAAAGTTTCAGGTTTGTTTTAGACTTCGTAGTATTTAGGCAGTTAAATACTGCTGTCCAGAGAAGGATTTGGTCTTCTTGGGGCTATGCCCTTTTTGCGTCCATGAGGCAATTCAATGTGGGTGAATGGATTGTAAATGTGATATGTTGATGATGTTGAATTCCGTAACTTTTCAGTTTTTTTTTTTTTTTTAATTCTTATTTTCAGATCTATATATCACTTATAATAATAATGGAAACCATTCTGTCTAGGAATAAAATGAATCAGTTTTTTTTTTTAATTCTTGTTTTAGTTTTTTTTTTAATTCTTATTTTCAGATCTATATATCACTTATAATAATAATGGAAACCATTCTGTCTAGGAATAATGTCGTATGTCCTCGTTACTTTTTTCCCTTGCACATTAGAATTGTTTATCTCACAGTTTGATGGCTTTGAACTAAAATGAATCAGGTTGGAGGATGCAGGTTATGCAGTTGGTGCTCGAGTATTGGAACTGTTTTGTCATCGAGAGAAGGTATAGAATCTTATGTTAAAGCTAATTGAACATTTCGCTTTCTTTAACTGAACCAAATTGTTTTTCTTTTTCAGCTGAAGTTTGTTTTATGTTCTCAGGATTTTATTTTAAGTTTAAGTCGCAAATTTATTTTTAAAAAAGCTTTGAAATTCTTCCGAAGATTAGGGTTTTGAAATCTGGTTAAAAATGGTTGTCTAATCTTTAAAATAAAGATTTGTTTGGTGTAGATAACTTAATTGACAGTAATTTTTAAAAACAACATTCAGAACAAAAACTACCAGACGATAGAGATATATTTATTTTCTGGTCAGAATACACTTTTGGCCTTGTGTCTATTTGGTTCTTAAGGTTTGAAAATAGACATTTTTAGGCCTAGGGTTTCTAAAATAGCTCTAAATGGTCCCTAAGCCCATTTGACCATTGGTTGACTAACGGATTATGATGTTGTAATTGATGACTTGTATTATATTGACTTGGCAAAATTAAATAAAATTAATATTATTTTGCTGGTGAAGTGGCCTTTCTCTCTTTCTTTCCCTCTTCTTCTTTGTCTGTCCTATTCTCCCTGAACCTTACCACCACCATCTGCCTCTCTCCAGCCATCGATCACCGTCACTTCACTTTTGTTCTTCCCCTGCCACCTCTTCAGATCTGTAATGAAGACCTTCCTTCCAGATCAGAAGGCTCATTAGAACGAAACTTCAGATATGGGAGGAAGCTCTTCATTCCAGATCTAAAGTCTCTCTGGAGATTTATTCTGAAAAGTAGTCTGGAATGAGATAGAAATGAAGTGTTCCAGACATCTATTTTAAATTAATTAGTTTCATGGTCTTTGGAAGGATTGCAGTGATGTGGGTTTAGGAAAGGAGAAAAAGAACAGTGTTGTTAGAAATAAAGTCAGTCTTGTGTAACATTTTTCTACTTCAAGTTTTGGAATGGGATTCGAAGTCTGTATAAACAAGTGTGGTCTTGATTGGATGAAATATTAAGAAACTACAGTATAACAATAGCCTTTCAAGAGGGCTATCTCTTATCCAAAGTCCCACAATGGACACTCCATTAAAATGATTCCCACCCTCTAAGTTCCCTAACACACTTCTGTCAATAATTTCTTCATTGTTTACCCTATCTATTCTCTCCACCACCTCCACATGACACCATTTAGAACTATTTTTCAAACCTTAGGTACTAAAAGTGCCCCTTTTCAGTCCTCGCGATCAAATAGCACCAACTCCTTACCTTAGGGATCAAAAGTGTATTTTTTCCCCGCTTTTTTATTTTGGATGTGTTCTGCAGTGTTTTCCAATCAATGGTTCATTAATTATAATAAGTACTTATTTAGGTATAATCTGCTATTCAAAAGTGTATTTTTTGAACTTACAACAAGAGAAATCTATTGAAAAAGAATTAGCGTGTGAAACTATGTTCTAAAACAACTATAAAAATACTCCCAAACCACTTAGCTAATTTTATCGGCAGTTATCATTAATTCCCTTCTACTTGCAATGAAGATGGTAGATCTGTTTAACCATGAAAGTTTAGTTATTGATTAATTTTTGTTAGAGCATCAGTTATTGGGCTTGTACATGGGAGATAACTCTTGAGCATAAAGCGCAATATTTTTAGATTTGAATTGCAGATATTCATTTACATAATTTTTTCGTTCTTTTGTATTTACTCTACCTTTAAGGTAACGTGCATATCTGCTTTATGCTTGTTTGTTCTCTCAGGGAAATAGACGGGAGACACGATTGTTAGGAATTCTGTCATTTGTACACAGCACAATTTGGAAGATTTTGTTTGGAAAGGTGAATACTTGTATTTTCTTGCACAAATTGCCCTTAAAGTATGGTAGATTACACCCTCTAACTTCAAATTTTGAAAATTAAACCTTATGTTGCAAGAATAATATATATTACTCTGTTTTCTTATTATTCATTAGACAAGACCAGACAACTAATAATCTTGTGAAAAGGGAACTATACAAAAAAGGGAACAATGCAGAAAATGAAACAATAGAAAATAGGAAATAGGCTAATTAATAGGATTGCACCTATACTCCTCAAATTAAGGTTATTCCTTTTTTGACTCCTTTGAATGTAGATCTTAGAGGGTAACCCAAAGATATGACAACATGAGTGGTATTCAGGATCTCACTGCATCGATACCGTTCAATGTGCCTCCGAAGTGTCCGACTTTACTTTGCACATCTGAATCTAAAACCACATTTCTTCATTAGTTTCTTTTAATTGATGTAGATTGAAAACTATTATAAAACTGTTTTTAAATTTAACTCTCGTACATTTTCAGTTGGTTTTGGTTTGGTCTCCTGTGTCCAACTTGCTTTCCCATTCTTTAGGGTTCTCCTCTCCCTATATGGATAGGGATTTGAATATCCCTTTTGGGGTTGATTAGGGATATTCAAATCAACCATGGTAGAAAGATTCTTCGTTTTGGCTTTTGAATATTTTCTGGGGTTTTTTTTGTGTAGTGTTTTTCAATCTTTGTGACCCCATCGCGCCCAAGGCCCCCCCCCCCCCAAAAAAAAAAAAAAAAACAAAAGACTCCCGTGTTTTCCTTAAAATGCAAAAGGAGGTTAAATTTTTTTTTTCCTGTAGATTTTGCATGGTCGAAATTTTTGTCTGGTAGGTTTTGTATGGAAAAGTCAACATTCCGAATCTTGTTCAAAGGTGTTTTTCTTCGTGTTTGGGGCATCAATGGTGCATCTGGTTCACAGAAGCTTCAGAGCATATTGATCATTTGTTTTGGTCTTGCTAGTTTGTGCAGTTGACTTGAGGTTGTTTTTTGGACTTCTTTGGGCTCCCTTGTGCGTAACAGAAATTGTAGATCCATGATGGAGGACACTGTCCCTCCTTAGGAAGAGTTCTTTGGCAGACCTTTTTTTTTTTTTTTTTTTTGTGGTGTTATGGTGTGTGTACTTGGCATGAGAGAAATAATAGTATTTTTTAGAGAACAGGCATTTGTTGTGGGTGGGCTCCTCTTGTATGGAATATTCTTTCACATTTCTCAAATAAAAGCTTGGTTTCTTTTTCTTAAAAAAAAAAAAAAAAAAAAAAAAAATCAGATGCTACATGTTTAGGTTTCAAAATTGGGTCATGATTTTAAAAAATGTTCTTGAAAGTAGATTAGAAAATAAATGACAATGTCGTAAATAAGCACAATTTTTAAGAACGTAAACTAGAATAACGAACGTTAAAAAGAACTCCTAAATAATTCCTTTGAACTGTTTGGCAGAATAAGTAGAAAAAATATACTAATTTCTGCGTGCATGTTGTCAGGTTGCTGACTCACTTGAGAAAGGCACTGAGCATGAAGATGAGTACATGATCAGTGAGAAAGAGCTGCTCGTGAATAGGTAACTATTGTCCCATTCTTCGTACTTATGCTTTTTTTTTGGCATTCACTCAATAACCCAATCATTTACCGTAGATTTATTTCAATTCCAAAAGACATGGGAGCATTTAACTGCGGGGCTTTTGTAGCTGGCATTGTAAAAGTAAGTTCTGCAAGCTCTCCATGATATGGGTGGTAATCTAGTTTATGAAAGTTCTGAATTTGTTCCTATTTGCTATAAGGGTGTTCTGGACAATGCTGGGTTTCCTGCTGTTGTAACGGCACATTTTGTTCCAGTGGAGGGCCAACAAAGACCACGGACGACTATTTTGATTAAATTTGCAGAAGAGGTGAGTATCCTCCCCCCTCCCCCACCAAAAAACCAAACTTTACTCTTCTTTTCTGATTAATGCTTATTGGAGTTCCTTTTTTAAACACTCATTTGCAAATTTGTCCATGTCAGATAGCTCAATAGATATATGTTAGATATTAGCTGTACAAGGCTAATGTGGGATACCGAATACTCGTTAGGCACATACTAAACCCTTGTTAAAACATAATAAATAGATGTATAATAATTTTTTTATAACATGGTACATGAAACTCGTTTTTTAGCCTATAAATGTGTGAACTCATTGATTTTGAATTTACTTGTAAAAAATGTATAATTTAATGAACGTGTCTTTGTTGTGTTCATATCAAAGATTTCAAAAATTGTGATGTGTCTCTGTGTTTGTGTGTTATCATATCTATGTCTTATGCCTGTATCCATGCATCTTAGGAGTTATATATGCATCCGTGCTATATTATTTTGAAGGTTTAGTATCAAGTTCCCTTTCCATTTTCTCTCAAATAATTGTGTGCTCTCTTTTCATTTCCTTTTTCTTTTTTCTTCTCGACCCCCTTTTCAGGTATTAGCAAGAGAAGCTAGATTAGGTTAATATCATCTGAAGTAAGCTTTGACAGCTTTGTGATAATGGAGAATGGGGAATGGTGAATTTCTTTTTAGCCCTTGGAACAAATAAAGATTTCCACCTGCTATATCCCTGTAGTGAAGCTGTAAGGAACTTTCGCTCGTCAATTAATTTCTTTACTTGATGGCAAAATGATGGCACAATTGTGAAACTATAAGATTTAGTAGTATTATTGTAAAGGTGTTTATATGAACTTCAAATGGTTTATTCAGCCTCTTGGTGATATTTGTGAACTCTGAATGTTTGAACAGAACCACATTTTAATCTCTACCAATTCAAGCTTTTGTTGCTAATTTTGTCGGTCGTTGTGTTTATATTAAAGTTATAACGCTTTATGTTCGTTGTGTAGCTGTACATGTGGATTTTCTTAAGAACCAATAAGGGAAATTGTTTGATACCTAAAAGGAAAAGGAAATGAATTATGGCTTAAAGGAACCAATATTCGGATTGTATTCTTGGAAATAATGTCTATTTTAACAAGGTTGTTCAATTTAAACGGCCCCACTTGTCGATAAATGGTACCTTCGTGTTTTAGTATTCAACAATGGTGGGTTGTGAAGAAGTTTGCCTATGAGGAATGTTGTCTAAGAAAACCGTAGACA

mRNA sequence

ATGATCGGAGTTGGGAAGGTCAAGCAGTATTCTAATGTCCTCGACAGACCTCTCAGCAAGGGCAAACAGGAGGTGAGTTTGAGTGCATTTGCATTCTTGTTCTCTGAACTCGTGCAATACAATCAGACTCAGGTTGACAACATTGCTGAGTTAGAACGAAGGTTGGAGGATGCAGGTTATGCAGTTGGTGCTCGAGTATTGGAACTGTTTTGTCATCGAGAGAAGGGAAATAGACGGGAGACACGATTGTTAGGAATTCTGTCATTTGTACACAGCACAATTTGGAAGATTTTGTTTGGAAAGGTTGCTGACTCACTTGAGAAAGGCACTGAGCATGAAGATGAGTACATGATCAGTGAGAAAGAGCTGCTCGTGAATAGATTTATTTCAATTCCAAAAGACATGGGAGCATTTAACTGCGGGGCTTTTGTAGCTGGCATTGTAAAAGGTGTTCTGGACAATGCTGGGTTTCCTGCTGTTGTAACGGCACATTTTGTTCCAGTGGAGGGCCAACAAAGACCACGGACGACTATTTTGATTAAATTTGCAGAAGAGGTATTAGCAAGAGAAGCTAGATTAGGTTAATATCATCTGAAGTAAGCTTTGACAGCTTTGTGATAATGGAGAATGGGGAATGGTGAATTTCTTTTTAGCCCTTGGAACAAATAAAGATTTCCACCTGCTATATCCCTGTAGTGAAGCTGTAAGGAACTTTCGCTCGTCAATTAATTTCTTTACTTGATGGCAAAATGATGGCACAATTGTGAAACTATAAGATTTAGTAGTATTATTGTAAAGGTGTTTATATGAACTTCAAATGGTTTATTCAGCCTCTTGGTGATATTTGTGAACTCTGAATGTTTGAACAGAACCACATTTTAATCTCTACCAATTCAAGCTTTTGTTGCTAATTTTGTCGGTCGTTGTGTTTATATTAAAGTTATAACGCTTTATGTTCGTTGTGTAGCTGTACATGTGGATTTTCTTAAGAACCAATAAGGGAAATTGTTTGATACCTAAAAGGAAAAGGAAATGAATTATGGCTTAAAGGAACCAATATTCGGATTGTATTCTTGGAAATAATGTCTATTTTAACAAGGTTGTTCAATTTAAACGGCCCCACTTGTCGATAAATGGTACCTTCGTGTTTTAGTATTCAACAATGGTGGGTTGTGAAGAAGTTTGCCTATGAGGAATGTTGTCTAAGAAAACCGTAGACA

Coding sequence (CDS)

ATGATCGGAGTTGGGAAGGTCAAGCAGTATTCTAATGTCCTCGACAGACCTCTCAGCAAGGGCAAACAGGAGGTGAGTTTGAGTGCATTTGCATTCTTGTTCTCTGAACTCGTGCAATACAATCAGACTCAGGTTGACAACATTGCTGAGTTAGAACGAAGGTTGGAGGATGCAGGTTATGCAGTTGGTGCTCGAGTATTGGAACTGTTTTGTCATCGAGAGAAGGGAAATAGACGGGAGACACGATTGTTAGGAATTCTGTCATTTGTACACAGCACAATTTGGAAGATTTTGTTTGGAAAGGTTGCTGACTCACTTGAGAAAGGCACTGAGCATGAAGATGAGTACATGATCAGTGAGAAAGAGCTGCTCGTGAATAGATTTATTTCAATTCCAAAAGACATGGGAGCATTTAACTGCGGGGCTTTTGTAGCTGGCATTGTAAAAGGTGTTCTGGACAATGCTGGGTTTCCTGCTGTTGTAACGGCACATTTTGTTCCAGTGGAGGGCCAACAAAGACCACGGACGACTATTTTGATTAAATTTGCAGAAGAGGTATTAGCAAGAGAAGCTAGATTAGGTTAA

Protein sequence

MIGVGKVKQYSNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISEKELLVNRFISIPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLAREARLG

Homology

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BLAST of Carg16496 vs. NCBI nr
Match: XP_022933069.1 (trafficking protein particle complex subunit 5 [Cucurbita moschata] >XP_022933077.1 trafficking protein particle complex subunit 5 [Cucurbita moschata] >XP_022933084.1 trafficking protein particle complex subunit 5 [Cucurbita moschata] >XP_022933085.1 trafficking protein particle complex subunit 5 [Cucurbita moschata] >XP_022933086.1 trafficking protein particle complex subunit 5 [Cucurbita moschata] >XP_022965374.1 trafficking protein particle complex subunit 5 [Cucurbita maxima] >XP_022965382.1 trafficking protein particle complex subunit 5 [Cucurbita maxima] >XP_022965388.1 trafficking protein particle complex subunit 5 [Cucurbita maxima] >XP_022965389.1 trafficking protein particle complex subunit 5 [Cucurbita maxima] >XP_022965390.1 trafficking protein particle complex subunit 5 [Cucurbita maxima] >XP_023531418.1 trafficking protein particle complex subunit 5 [Cucurbita pepo subsp. pepo] >XP_023531419.1 trafficking protein particle complex subunit 5 [Cucurbita pepo subsp. pepo] >XP_023531421.1 trafficking protein particle complex subunit 5 [Cucurbita pepo subsp. pepo] >XP_023531422.1 trafficking protein particle complex subunit 5 [Cucurbita pepo subsp. pepo] >XP_023531423.1 trafficking protein particle complex subunit 5 [Cucurbita pepo subsp. pepo] >XP_023531424.1 trafficking protein particle complex subunit 5 [Cucurbita pepo subsp. pepo] >KAG6588328.1 Trafficking protein particle complex subunit 5, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020891.1 Trafficking protein particle complex subunit 5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 383.3 bits (983), Expect = 1.3e-102
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MIGVGKVKQYSNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60
           MIGVGKVKQYSNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKVKQYSNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISE 120
           AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISE 120

Query: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180
           KELLVNRFISIPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180

Query: 181 KFAEEVLAREARLG 195
           KFAEEVLAREARLG
Sbjct: 181 KFAEEVLAREARLG 194

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BLAST of Carg16496 vs. NCBI nr
Match: XP_038874607.1 (trafficking protein particle complex subunit 5 isoform X2 [Benincasa hispida])

HSP 1 Score: 380.2 bits (975), Expect = 1.1e-101
Identity = 190/194 (97.94%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MIGVGKVKQYSNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60
           MIGVGK+KQYSNVLD+PLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKIKQYSNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISE 120
           AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWK+LFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180
           KELLVNRFISIPKDMGAFNCGAFVAGIV+GVLDNAGFPAVVTAHFVPVEGQQRPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVRGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180

Query: 181 KFAEEVLAREARLG 195
           KFAEEVLAREARLG
Sbjct: 181 KFAEEVLAREARLG 194

[Close]

BLAST of Carg16496 vs. NCBI nr
Match: XP_008460002.1 (PREDICTED: trafficking protein particle complex subunit 5 [Cucumis melo])

HSP 1 Score: 379.8 bits (974), Expect = 1.4e-101
Identity = 190/194 (97.94%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MIGVGKVKQYSNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60
           MIGVGK+KQYSNVL+RPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKIKQYSNVLERPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISE 120
           AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWK+LFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180
           KELLVNRFISIPKDMGAFNCGAFVAGIV+GVLDNAGFPAVVTAHFVPVEGQQRPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVRGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180

Query: 181 KFAEEVLAREARLG 195
           KFAEEVLAREARLG
Sbjct: 181 KFAEEVLAREARLG 194

[Close]

BLAST of Carg16496 vs. NCBI nr
Match: XP_004140592.1 (trafficking protein particle complex subunit 5 [Cucumis sativus] >KGN46343.1 hypothetical protein Csa_004872 [Cucumis sativus])

HSP 1 Score: 378.6 bits (971), Expect = 3.2e-101
Identity = 189/194 (97.42%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MIGVGKVKQYSNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60
           MIGVGK+KQYSNVL++PLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKIKQYSNVLEKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISE 120
           AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWK+LFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180
           KELLVNRFISIPKDMGAFNCGAFVAGIV+GVLDNAGFPAVVTAHFVPVEGQQRPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVRGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180

Query: 181 KFAEEVLAREARLG 195
           KFAEEVLAREARLG
Sbjct: 181 KFAEEVLAREARLG 194

[Close]

BLAST of Carg16496 vs. NCBI nr
Match: XP_022154882.1 (trafficking protein particle complex subunit 5 [Momordica charantia] >XP_022154883.1 trafficking protein particle complex subunit 5 [Momordica charantia])

HSP 1 Score: 375.6 bits (963), Expect = 2.7e-100
Identity = 187/194 (96.39%), Postives = 193/194 (99.48%), Query Frame = 0


Query: 1   MIGVGKVKQYSNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60
           MIGVGK+KQYSNVLD+PLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKMKQYSNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISE 120
           AVGARVLELFCHREKGNRRETRLLGILSFVHST+WK+LFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180
           KELLVNRFISIPKDMGAFNCGAFVAGIV+GVLD+AGFPAVVTAHFVPVEGQQRPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILI 180

Query: 181 KFAEEVLAREARLG 195
           KFAEEVL REARLG
Sbjct: 181 KFAEEVLTREARLG 194

[Close]

BLAST of Carg16496 vs. ExPASy Swiss-Prot
Match: Q54YG5 (Trafficking protein particle complex subunit 5 OS=Dictyostelium discoideum OX=44689 GN=trappc5 PE=3 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 8.2e-60
Identity = 109/180 (60.56%), Postives = 146/180 (81.11%), Query Frame = 0


Query: 12  NVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELFC 71
           N++DRPLSKGK E+++S+FAFLFSE++QY Q ++    ELE++L D GY++G R+LEL C
Sbjct: 7   NIVDRPLSKGKGEINISSFAFLFSEMIQYCQDRIKAGHELEKKLSDMGYSIGPRLLELLC 66

Query: 72  HREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISEKELLVNRFISI 131
            REK ++RET+LLGILSF+H+T+WK LFGK ADSLEK TE +DEYMIS+  ++VN+FIS+
Sbjct: 67  VREKNSKRETKLLGILSFIHTTVWKSLFGKPADSLEKSTEADDEYMISDNNMVVNKFISL 126

Query: 132 PKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLAREA 191
           PK + + NC AFVAGI++G+L +A FPA VTAH V VEG++ P+T ILIKF  EV+ R A
Sbjct: 127 PKHLSSLNCAAFVAGIIEGILCSAEFPARVTAHNVAVEGKRFPKTVILIKFNPEVIERNA 186

[Close]

BLAST of Carg16496 vs. ExPASy Swiss-Prot
Match: Q9P7N9 (Transport protein particle subunit trs31 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=trs31 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 7.4e-45
Identity = 94/184 (51.09%), Postives = 129/184 (70.11%), Query Frame = 0


Query: 12  NVLDRPLSK-GKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELF 71
           +V ++ L+K    +V+LS+FAF+FSEL+Q  Q+QV  I E E +L + GY VG +++EL 
Sbjct: 27  SVYEQNLNKIRNSDVNLSSFAFIFSELIQRIQSQVSGIQEFEEKLNEHGYRVGQKLVELV 86

Query: 72  CHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISEKELLVNRFIS 131
             RE+  +RETR+LGIL ++HS++WK LFGK ADSLEK  E  DEYMI +   L+N+FIS
Sbjct: 87  VWRERNPKRETRILGILQYIHSSVWKYLFGKHADSLEKSKEASDEYMIVDNNPLLNKFIS 146

Query: 132 IPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLARE 191
           +PK+M   NC A++AGI++G LD+A FP   +AH VP+  Q   RT ILIK    V+ARE
Sbjct: 147 VPKEMNQLNCCAYLAGIIEGFLDSAQFPCKASAHSVPL-SQYPYRTVILIKLDPSVIARE 206

Query: 192 ARLG 195
             LG
Sbjct: 207 EVLG 209

[Close]

BLAST of Carg16496 vs. ExPASy Swiss-Prot
Match: Q8IUR0 (Trafficking protein particle complex subunit 5 OS=Homo sapiens OX=9606 GN=TRAPPC5 PE=1 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 4.5e-42
Identity = 92/183 (50.27%), Postives = 124/183 (67.76%), Query Frame = 0


Query: 11  SNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELF 70
           S +L+R L++ + EVSLSAFA LFSELVQ+ Q++V ++AEL+ RL   G  VGARVL+  
Sbjct: 10  SALLERALARPRTEVSLSAFALLFSELVQHCQSRVFSVAELQSRLAALGRQVGARVLDAL 69

Query: 71  CHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISEKELLVNRFIS 130
             REKG RRET++LG L FV   +WK LFGK AD LE+  +    + I E+E L+N +IS
Sbjct: 70  VAREKGARRETKVLGALLFVKGAVWKALFGKEADKLEQANDDARTFYIIEREPLINTYIS 129

Query: 131 IPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLARE 190
           +PK+    NC +F AGIV+ VL ++GFPA VTAH+          TT++IKF E V+AR+
Sbjct: 130 VPKENSTLNCASFTAGIVEAVLTHSGFPAKVTAHW-------HKGTTLMIKFEEAVIARD 185

Query: 191 ARL 194
             L
Sbjct: 190 RAL 185

[Close]

BLAST of Carg16496 vs. ExPASy Swiss-Prot
Match: Q2NL13 (Trafficking protein particle complex subunit 5 OS=Bos taurus OX=9913 GN=TRAPPC5 PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 5.9e-42
Identity = 92/183 (50.27%), Postives = 123/183 (67.21%), Query Frame = 0


Query: 11  SNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELF 70
           S +L+R L++ + EVSLSAFA LFSELVQ+ Q++V  +AEL+ RL   G  VGARVL+  
Sbjct: 10  SALLERALARPRTEVSLSAFALLFSELVQHCQSRVFTVAELQARLAALGRQVGARVLDAL 69

Query: 71  CHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISEKELLVNRFIS 130
             REKG RRET++LG L FV   +WK LFGK AD LE+  +    + I E+E L+N +IS
Sbjct: 70  VAREKGARRETKVLGALLFVKGAVWKALFGKEADKLEQANDDARTFYIIEREPLINTYIS 129

Query: 131 IPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLARE 190
           +PK+    NC +F AGIV+ VL ++GFPA VTAH+          TT++IKF E V+AR+
Sbjct: 130 VPKENSTLNCASFTAGIVEAVLTHSGFPAKVTAHW-------HKGTTLMIKFEEAVIARD 185

Query: 191 ARL 194
             L
Sbjct: 190 RAL 185

[Close]

BLAST of Carg16496 vs. ExPASy Swiss-Prot
Match: Q9CQA1 (Trafficking protein particle complex subunit 5 OS=Mus musculus OX=10090 GN=Trappc5 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.0e-41
Identity = 92/183 (50.27%), Postives = 123/183 (67.21%), Query Frame = 0


Query: 11  SNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELF 70
           S +L+R L + + EVSLSAFA LFSELVQ+ Q++V ++AEL+ RL   G  VGARVL+  
Sbjct: 10  SALLERALVRPRTEVSLSAFALLFSELVQHCQSRVFSVAELQARLAALGRQVGARVLDAL 69

Query: 71  CHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISEKELLVNRFIS 130
             REKG RRET++LG L FV   +WK LFGK AD LE+  +    + I E+E L+N +IS
Sbjct: 70  VAREKGARRETKVLGALLFVKGAVWKALFGKEADKLEQANDDARTFYIIEREPLINTYIS 129

Query: 131 IPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLARE 190
           +PK+    NC +F AGIV+ VL ++GFPA VTAH+          TT++IKF E V+AR+
Sbjct: 130 VPKENSTLNCASFTAGIVEAVLTHSGFPAKVTAHW-------HKGTTLMIKFEEAVIARD 185

Query: 191 ARL 194
             L
Sbjct: 190 RAL 185

[Close]

BLAST of Carg16496 vs. ExPASy TrEMBL
Match: A0A6J1HQV4 (Trafficking protein particle complex subunit OS=Cucurbita maxima OX=3661 GN=LOC111465251 PE=3 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 6.2e-103
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MIGVGKVKQYSNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60
           MIGVGKVKQYSNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKVKQYSNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISE 120
           AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISE 120

Query: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180
           KELLVNRFISIPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180

Query: 181 KFAEEVLAREARLG 195
           KFAEEVLAREARLG
Sbjct: 181 KFAEEVLAREARLG 194

[Close]

BLAST of Carg16496 vs. ExPASy TrEMBL
Match: A0A6J1EYR6 (Trafficking protein particle complex subunit OS=Cucurbita moschata OX=3662 GN=LOC111439773 PE=3 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 6.2e-103
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MIGVGKVKQYSNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60
           MIGVGKVKQYSNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKVKQYSNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISE 120
           AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISE 120

Query: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180
           KELLVNRFISIPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180

Query: 181 KFAEEVLAREARLG 195
           KFAEEVLAREARLG
Sbjct: 181 KFAEEVLAREARLG 194

[Close]

BLAST of Carg16496 vs. ExPASy TrEMBL
Match: A0A1S3CCR2 (Trafficking protein particle complex subunit OS=Cucumis melo OX=3656 GN=LOC103498948 PE=3 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 6.8e-102
Identity = 190/194 (97.94%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MIGVGKVKQYSNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60
           MIGVGK+KQYSNVL+RPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKIKQYSNVLERPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISE 120
           AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWK+LFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180
           KELLVNRFISIPKDMGAFNCGAFVAGIV+GVLDNAGFPAVVTAHFVPVEGQQRPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVRGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180

Query: 181 KFAEEVLAREARLG 195
           KFAEEVLAREARLG
Sbjct: 181 KFAEEVLAREARLG 194

[Close]

BLAST of Carg16496 vs. ExPASy TrEMBL
Match: A0A0A0KA36 (Trafficking protein particle complex subunit OS=Cucumis sativus OX=3659 GN=Csa_6G087720 PE=3 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.5e-101
Identity = 189/194 (97.42%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MIGVGKVKQYSNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60
           MIGVGK+KQYSNVL++PLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKIKQYSNVLEKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISE 120
           AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWK+LFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180
           KELLVNRFISIPKDMGAFNCGAFVAGIV+GVLDNAGFPAVVTAHFVPVEGQQRPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVRGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180

Query: 181 KFAEEVLAREARLG 195
           KFAEEVLAREARLG
Sbjct: 181 KFAEEVLAREARLG 194

[Close]

BLAST of Carg16496 vs. ExPASy TrEMBL
Match: A0A6J1DMW5 (Trafficking protein particle complex subunit OS=Momordica charantia OX=3673 GN=LOC111022034 PE=3 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.3e-100
Identity = 187/194 (96.39%), Postives = 193/194 (99.48%), Query Frame = 0


Query: 1   MIGVGKVKQYSNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60
           MIGVGK+KQYSNVLD+PLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKMKQYSNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISE 120
           AVGARVLELFCHREKGNRRETRLLGILSFVHST+WK+LFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180
           KELLVNRFISIPKDMGAFNCGAFVAGIV+GVLD+AGFPAVVTAHFVPVEGQQRPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILI 180

Query: 181 KFAEEVLAREARLG 195
           KFAEEVL REARLG
Sbjct: 181 KFAEEVLTREARLG 194

[Close]

BLAST of Carg16496 vs. TAIR 10
Match: AT5G58030.1 (Transport protein particle (TRAPP) component )

HSP 1 Score: 365.2 bits (936), Expect = 3.4e-101
Identity = 181/193 (93.78%), Postives = 190/193 (98.45%), Query Frame = 0


Query: 1   MIGVGKVKQYSNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60
           MIGVGK+KQYSNVLD+PLSKGKQEVSL+AFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKMKQYSNVLDKPLSKGKQEVSLTAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISE 120
           AVG+RVLEL C+REKGNRRETRLLGILSFVHST+WK+LFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGSRVLELLCNREKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180
           KELLVNRFISIPKDMG FNCGAFVAGIVKGVLDNAGFPAVVTAHFVP+EGQQRPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGTFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPIEGQQRPRTTILI 180

Query: 181 KFAEEVLAREARL 194
           KFA+EVL REARL
Sbjct: 181 KFADEVLKREARL 193

The following BLAST results are available for this feature:

BLAST of Carg16496 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933069.1	1.3e-102	100.00	trafficking protein particle complex subunit 5 [Cucurbita moschata] >XP_02293307...	[more]
XP_038874607.1	1.1e-101	97.94	trafficking protein particle complex subunit 5 isoform X2 [Benincasa hispida]	[more]
XP_008460002.1	1.4e-101	97.94	PREDICTED: trafficking protein particle complex subunit 5 [Cucumis melo]	[more]
XP_004140592.1	3.2e-101	97.42	trafficking protein particle complex subunit 5 [Cucumis sativus] >KGN46343.1 hyp...	[more]
XP_022154882.1	2.7e-100	96.39	trafficking protein particle complex subunit 5 [Momordica charantia] >XP_0221548...	[more]

BLAST of Carg16496 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54YG5	8.2e-60	60.56	Trafficking protein particle complex subunit 5 OS=Dictyostelium discoideum OX=44...	[more]
Q9P7N9	7.4e-45	51.09	Transport protein particle subunit trs31 OS=Schizosaccharomyces pombe (strain 97...	[more]
Q8IUR0	4.5e-42	50.27	Trafficking protein particle complex subunit 5 OS=Homo sapiens OX=9606 GN=TRAPPC...	[more]
Q2NL13	5.9e-42	50.27	Trafficking protein particle complex subunit 5 OS=Bos taurus OX=9913 GN=TRAPPC5 ...	[more]
Q9CQA1	1.0e-41	50.27	Trafficking protein particle complex subunit 5 OS=Mus musculus OX=10090 GN=Trapp...	[more]

BLAST of Carg16496 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HQV4	6.2e-103	100.00	Trafficking protein particle complex subunit OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1EYR6	6.2e-103	100.00	Trafficking protein particle complex subunit OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A1S3CCR2	6.8e-102	97.94	Trafficking protein particle complex subunit OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A0A0KA36	1.5e-101	97.42	Trafficking protein particle complex subunit OS=Cucumis sativus OX=3659 GN=Csa_6...	[more]
A0A6J1DMW5	1.3e-100	96.39	Trafficking protein particle complex subunit OS=Momordica charantia OX=3673 GN=L...	[more]

BLAST of Carg16496 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58030.1	3.4e-101	93.78	Transport protein particle (TRAPP) component	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016696	TRAPP I complex, subunit 5	PIRSF	PIRSF017479	TRAPP_1_Trs31	coord: 3..194 e-value: 1.1E-77 score: 258.3
IPR016696	TRAPP I complex, subunit 5	PANTHER	PTHR20902	41-2 PROTEIN ANTIGEN-RELATED	coord: 1..188
IPR016696	TRAPP I complex, subunit 5	CDD	cd14943	TRAPPC5_Trs31	coord: 25..182 e-value: 2.40026E-97 score: 277.108
None	No IPR available	GENE3D	3.30.1380.20	Trafficking protein particle complex subunit 3	coord: 23..194 e-value: 9.8E-64 score: 215.7
None	No IPR available	PANTHER	PTHR20902:SF1	TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT	coord: 1..188
IPR007194	Transport protein particle (TRAPP) component	PFAM	PF04051	TRAPP	coord: 30..182 e-value: 3.8E-44 score: 150.1
IPR024096	NO signalling/Golgi transport ligand-binding domain superfamily	SUPERFAMILY	111126	Ligand-binding domain in the NO signalling and Golgi transport	coord: 23..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16496-RA	Carg16496-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0048193	Golgi vesicle transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:1990072	TRAPPIII protein complex
cellular_component	GO:1990071	TRAPPII protein complex
cellular_component	GO:1990070	TRAPPI protein complex
cellular_component	GO:0030008	TRAPP complex