Carg16488 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16488
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	transcription factor UNE12-like
Location	Carg_Chr12: 7854264 .. 7859226 (+)
RNA-Seq Expression	Carg16488
Synteny	Carg16488

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGGAATCCCCTCTGAGGGGTTGGGAGATGACTTCTTCGAGCAGATTCTCGCAGTGCAGCCGGGTTACGCCGCCGGAGCAACCGGCGATGTCGTCTCTATTCCGATGGCCTTGCAACTTGGGTCTGGCGGAAGCGGCGGCGGCGGCGACGGGTTGAGAGGGATAGCTGGGCTGCAAGGAGGCGGTGGAGGAGGAGGGATGGGTATGCCGTTGGGGCTGAATTTAGAACAAGGGTTTTTGAGACAAGAGAGGTTTAGAGATGAACTTAATAACAATAATAATAACAATAATACCACTAATAATGCTTCATCTTCTTCCACTGCTTCTTCTGGAATCACTGTAAATCTCTCTTTCCTTCTCTTAATTTCTTCATTTGTTCTTCATGTTCTTCAGTGGGGAGGGAAGGGATTTTGGGTGTTTTTATATGCTCTGTTTGGATCATCTGAATGATTGCAACCCAGATTAGAACACGTTCAATTTTCCCATTTTGGGTAACAAAAAATTGATTAAATTGAAAATTGTTTGTTCTTCTTCTCCAGACTTAGGAGCAGTCTACTTCAGCTACAGAAATTTTATTCCCATTCTCATAATTTTTTTTTTTTTTTAATTATTATGATTCTTAAGGGTGTTTTCGTCATTTGACTCTTGTTTTCAGGAGAGAGATTCTTCGGTTCAGCACATGAACGCCTTGTTTCCTTCCTTTGGACATTTGCAGCAGACTCAACAACTCCGGCCACCTCCGCCGCCGTTACATCTTCACCAGGTGAATTTACATTTTTCTCCCTATATCCCTCCTTTTTTTTTTTCCTTTTCTTTTTCTAAAAATAATAATGTTATTTATTCTAATATCCATTTGGGTTTATCATAATTATTAATTAAAAGCATTCATAAATTAATCCTCGTTATAACCTATGCTTTTTTAGCACATTTAATCATAGTGACATTAAATCAAAATAAATAAATAAAGCACACGAGACAATTTTGTTAATAAAAGGGTTTTTTTAATTAATTTTTTTAATTTTTTTAAAAAAATATCACATGTGATGCTCGATACTAAATTTCAAACCAAGTACAAAAAAACGCGTTTTCTGAATTAATTTTTATTTTTTTTAATTTCCTTTTATTATTATTATTATTCTTCTTGAACCCAAACAGTTCTTGTGTTATCTTCGTTTCCAAACAGACCTTAATCTTCAATTTTTACTTTGGGGAGTGTGTATTACACGTGTCTGATTCTGATTGGTGTTTGTCTTTTATCAATTATTGATTGACGGTAAAAGACAAACAAACCATCTCTCCCACGTGTGTAAATTCTTCGTACGTGTAAGTAATCTTTGCCGTTGGATTCTGGAAGCCTAAGCATGATCATTCGCTTACGTCATTACTTAAGGAGCGTCTGAAACACGCTCCTTTTATTTTTTCCAAAGATGTCAGAGTCCATCCACGTGGTTGTGTTTTATTGGCGGAAACCAAGAACCCATGTTTTATTCTTTTAAATTAATTTTTTATATGCTAGTGCTTTTTTCTTTTAATTTTTTTTTAATTCTTTTTAACTTATGTTAATTTTTAATTAAAATAATATAAATAAAATGTCTGTTACCCACAAAAAATTTATTCTTTGTTCTAAAAATATGAATGTGGTCAGTAGGACAATAATGTAATTTCCTTCATTTTTATTTATTTATTTATTTATTTATTTATTCATAATATTTTAATTTGTGCTCCATTATTATGTGTTGGTTTTTGGAACCTTGTAGCCATCTTTAGCCAGATGCCAATTTATATATAAATAAATGAATTAAAATTTTATCTTTTTATTGCTTACAAAGAGAAAATGACAATTGAGAAATTCCCATTTTAATGGCTAATTTATTCATTATATTCTTTCTTCCATGGAAATAAGACTAAAGGAAAGCATACAAATAGTTTGACATATGATGATGTATCTTCTTTGGATTCATGTGCAGCCCTTTCACAATCAGACAAATCCCGGGATGGTTGCTGCTGTACCGCAACCTTCTCAAATTCGTCCGAGAGTTCGAGCACGACGTGGACAAGCGACTGATCCTCATAGTATTGCCGAAAGGGTAATCTCTTCTTTCGATTTTAAGAATGTTGATAAGAATGTATGGAAGTCCTCTTGTTTACTACTAGTTGACTAGGAAATGTCTTTGTTGTGTTACGCAATAGAAATGAGAAATGGGAAACGAGAAACAATACATGTTGATAGAGCGGTTTTTTTGTCTTAGTATGTCGCTCGTTTATTGTGAGATCTCATGTTGGTTGGAGAGGAGAACGAAATATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAACCGTGAGGCTGATGACGATACGTAACGGGCCAAACTAGACAATATATGTTAGCGGTGGGTTTGTTCTGTTACAAATAGTATCAGAGCCAGATACTGGGCGGTGTGTCAACGAGGACGTTGGGCTCTCAAGAGGGGTGGATTGTGAGATCCCACATCAGTTGAAGAAGGGAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCTCTAGCGGACGCATTTTAAAACCGTGAGGCTGACGGTGATACGTAACAAGCCAAAGTAGACAATATCTGTTAGCAGTGGGCTTGGGTTGTTACAAATGGTTTCAGAGCCAAACACTGGGCGGTGTGTCAGCGAGGATGCTGGGCCCTCAAGGGGGTGGATTGTGAAATCCCACATCGATTGGAGAGGGGGGAACAAAGCATTCCTTATAAGGGTTTAGAAACCTCTCCCTAGTAGACGCGTTTTAAAATCGTGAGGCTGACGGTGATACGTAACGGGCCAAAGCGAACAATATCTGTTAGCGGTGGGCTTGGGCTGTTACAAATTTTATCAGAGCCAGACACCGGGCGGTGTACCAGCCAAGACACTAGGTCCCAAGGGGGGTGGATTGTGAGATCCCACGTCGATTATAGAGGGGAATGAAGCATTTCTTATAAGGGTGTGAAAACCTCTCCCTAGTAGACGCGTTTTAAAACTGTGAGACTGACGACTATACGTAATGGACAAGCAGACAATATCTGTTAGCGGTGAGAGAGAAAGTCCATACAGAGAAAGTCCATACAGCACTTGTGCTTATTTAGGAGTTCATATAAGGAAACCCCATCATTTTAAGAGCTTTGGGAAGCCCTTAGAAAGGTCATAGATGCTAGATAGCCAAAAGAAGTGACATTCTTGACCACTTTAGAGATCACAAGGGAGGGTGTCAACCAAAAGGGTGCCCCAATGTGCCCTCCAATTTGATAACATGGCAATCTTACTCGGTCACCATCCTTGCGCACCTAAATAGAGCTTTATCCGATCGAAACCAACCGATCGAGCTGAGGTCGGTGTCCTTTAAATCAAGAGGTTTAAGGACATCGAACCAGTCATTAGGGAATAACTAGCATCAGTGAAGGAAGGAGCGGGATAGATTATCAACGTATAAAGTTAGAACGTAAAATTTTTACGTGTCCCAATAAATATTTCGTGCTTTGCCCTCCTAGAGAAGACAAGGGGACGAGAGGGGAGTAGCGGAGACGCCTTTGTAAAGAATTTTCGAAGAAAGTTTCCTAAACGAACTCTAAATGGCTTTCTTTTTTTTCACTTTTTGTGTTATCTATATCTCAATAAATCTTAGCTCGGTTCGACTGTCATGACTGCAGTTGCGTCGAGAAAGAATCGCAGAAAGAATGAAGGCCTTGCAGGAGTTGGTTCCTAGCTGCAATAAGGTTTGGTTCCACTCAAAAACCTGAATTTTCTTAACGACTCCGATTTCTCGAACACAAATTCAGTCTCGACATTAACCAATTCATTTCGTTTTGCAGACTGATAGAGCGGCAATGCTCGATGAAATTGTGGATTATGTAAAGTTTCTTAGGCTTCAAGTTAAGGTACTCATTTTCAAACTATTTTTCAGAACAATGAAAGTTCATGACCTCGTCCTTTACGAGTCACTCGAGTCTACCAAGCATGACCCCGATTTTTATATTGGTTGATTTGTTTCCTAGATGTCTCGTATCTGATTTTATTCGATATACTTTCCATAGGTTTTAAGCATGAGCAGACTAGGTGGGGCAGGAGCGGTGGCTCAACTTGTGGCTGATGTGCCCCTATCATCAGTCGAGGTACGAAAATTTGAGCTTCGACGTTCTTTATAGAAATGACCCTCTTCTCCCGGGCTTAAAGATTAGCCCGAGATCGATTAAGGAACTATAGAAATGACCCTTTATTGTCTTATTGTGTTAAACGACTATTAACTCAAAAGCTTAAACTGATAGGTTATATGGCTCTCTAATCTTTTAGGGATTAGTCCCAAACCGAAAAACGTTGCTACTAAAATGATATTACAGGAGTTCAAACACGAAACCTCGTATTTTGTCATCATGTCAAACTAGTAGTAAACTCAAAAGTTTAAGTCGACATGTCAGTATATTTTCGACATTCTCGTCGTTTTGCTTACGATTCTCGACCGGGATTTTGCATATTTATAGGGAGAAGGCATTGAGAGCGGTGCGAATCAACAAGCATGGGAGAAATGGTCAAGTGATGGCACAGAGCAACAAGTAGCAAAACTAATGGAAGAAGATGTGGGAGCTGCCATGCAATTCCTACAATCTAAAGCTCTATGCATCATGCCCATCTCATTAGCCTCAGCCATTTTCAGGACACACCAAGCCGATCCGCCGATCATGGTTAAGCCAGAAATGAACACTCCTTAGACCGACCGACCTTACGTGCCCATCTCGGACTCCAACCGTGCTAAGTTGGTTAAATCCATCCCGTTTATCGTTTCGTGATTATGGATATCATCAACATAATATATAATCTAGTGTTTTTTTGTAACTCCTTATTGAAGTGAAGTGGTGGAAAATGACCAAAATATTTTGTGATGGAAAATCTACAACTTTTGTTTCTTGTTTCTTTTTT

mRNA sequence

ATGGCCGGAATCCCCTCTGAGGGGTTGGGAGATGACTTCTTCGAGCAGATTCTCGCAGTGCAGCCGGGTTACGCCGCCGGAGCAACCGGCGATGTCGTCTCTATTCCGATGGCCTTGCAACTTGGGTCTGGCGGAAGCGGCGGCGGCGGCGACGGGTTGAGAGGGATAGCTGGGCTGCAAGGAGGCGGTGGAGGAGGAGGGATGGGTATGCCGTTGGGGCTGAATTTAGAACAAGGGTTTTTGAGACAAGAGAGGTTTAGAGATGAACTTAATAACAATAATAATAACAATAATACCACTAATAATGCTTCATCTTCTTCCACTGCTTCTTCTGGAATCACTGAGAGAGATTCTTCGGTTCAGCACATGAACGCCTTGTTTCCTTCCTTTGGACATTTGCAGCAGACTCAACAACTCCGGCCACCTCCGCCGCCGTTACATCTTCACCAGCCCTTTCACAATCAGACAAATCCCGGGATGGTTGCTGCTGTACCGCAACCTTCTCAAATTCGTCCGAGAGTTCGAGCACGACGTGGACAAGCGACTGATCCTCATAGTATTGCCGAAAGGTTGCGTCGAGAAAGAATCGCAGAAAGAATGAAGGCCTTGCAGGAGTTGGTTCCTAGCTGCAATAAGACTGATAGAGCGGCAATGCTCGATGAAATTGTGGATTATGTAAAGTTTCTTAGGCTTCAAGTTAAGGTTTTAAGCATGAGCAGACTAGGTGGGGCAGGAGCGGTGGCTCAACTTGTGGCTGATGTGCCCCTATCATCAGTCGAGGGAGAAGGCATTGAGAGCGGTGCGAATCAACAAGCATGGGAGAAATGGTCAAGTGATGGCACAGAGCAACAAGTAGCAAAACTAATGGAAGAAGATGTGGGAGCTGCCATGCAATTCCTACAATCTAAAGCTCTATGCATCATGCCCATCTCATTAGCCTCAGCCATTTTCAGGACACACCAAGCCGATCCGCCGATCATGGTTAAGCCAGAAATGAACACTCCTTAGACCGACCGACCTTACGTGCCCATCTCGGACTCCAACCGTGCTAAGTTGGTTAAATCCATCCCGTTTATCGTTTCGTGATTATGGATATCATCAACATAATATATAATCTAGTGTTTTTTTGTAACTCCTTATTGAAGTGAAGTGGTGGAAAATGACCAAAATATTTTGTGATGGAAAATCTACAACTTTTGTTTCTTGTTTCTTTTTT

Coding sequence (CDS)

ATGGCCGGAATCCCCTCTGAGGGGTTGGGAGATGACTTCTTCGAGCAGATTCTCGCAGTGCAGCCGGGTTACGCCGCCGGAGCAACCGGCGATGTCGTCTCTATTCCGATGGCCTTGCAACTTGGGTCTGGCGGAAGCGGCGGCGGCGGCGACGGGTTGAGAGGGATAGCTGGGCTGCAAGGAGGCGGTGGAGGAGGAGGGATGGGTATGCCGTTGGGGCTGAATTTAGAACAAGGGTTTTTGAGACAAGAGAGGTTTAGAGATGAACTTAATAACAATAATAATAACAATAATACCACTAATAATGCTTCATCTTCTTCCACTGCTTCTTCTGGAATCACTGAGAGAGATTCTTCGGTTCAGCACATGAACGCCTTGTTTCCTTCCTTTGGACATTTGCAGCAGACTCAACAACTCCGGCCACCTCCGCCGCCGTTACATCTTCACCAGCCCTTTCACAATCAGACAAATCCCGGGATGGTTGCTGCTGTACCGCAACCTTCTCAAATTCGTCCGAGAGTTCGAGCACGACGTGGACAAGCGACTGATCCTCATAGTATTGCCGAAAGGTTGCGTCGAGAAAGAATCGCAGAAAGAATGAAGGCCTTGCAGGAGTTGGTTCCTAGCTGCAATAAGACTGATAGAGCGGCAATGCTCGATGAAATTGTGGATTATGTAAAGTTTCTTAGGCTTCAAGTTAAGGTTTTAAGCATGAGCAGACTAGGTGGGGCAGGAGCGGTGGCTCAACTTGTGGCTGATGTGCCCCTATCATCAGTCGAGGGAGAAGGCATTGAGAGCGGTGCGAATCAACAAGCATGGGAGAAATGGTCAAGTGATGGCACAGAGCAACAAGTAGCAAAACTAATGGAAGAAGATGTGGGAGCTGCCATGCAATTCCTACAATCTAAAGCTCTATGCATCATGCCCATCTCATTAGCCTCAGCCATTTTCAGGACACACCAAGCCGATCCGCCGATCATGGTTAAGCCAGAAATGAACACTCCTTAG

Protein sequence

MAGIPSEGLGDDFFEQILAVQPGYAAGATGDVVSIPMALQLGSGGSGGGGDGLRGIAGLQGGGGGGGMGMPLGLNLEQGFLRQERFRDELNNNNNNNNTTNNASSSSTASSGITERDSSVQHMNALFPSFGHLQQTQQLRPPPPPLHLHQPFHNQTNPGMVAAVPQPSQIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLSSVEGEGIESGANQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIFRTHQADPPIMVKPEMNTP

Homology

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BLAST of Carg16488 vs. NCBI nr
Match: KAG6588321.1 (Transcription factor UNE12, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020883.1 Transcription factor UNE12, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 626.7 bits (1615), Expect = 1.1e-175
Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 0


Query: 1   MAGIPSEGLGDDFFEQILAVQPGYAAGATGDVVSIPMALQLGSGGSGGGGDGLRGIAGLQ 60
           MAGIPSEGLGDDFFEQILAVQPGYAAGATGDVVSIPMALQLGSGGSGGGGDGLRGIAGLQ
Sbjct: 1   MAGIPSEGLGDDFFEQILAVQPGYAAGATGDVVSIPMALQLGSGGSGGGGDGLRGIAGLQ 60

Query: 61  GGGGGGGMGMPLGLNLEQGFLRQERFRDELNNNNNNNNTTNNASSSSTASSGITERDSSV 120
           GGGGGGGMGMPLGLNLEQGFLRQERFRDELNNNNNNNNTTNNASSSSTASSGITERDSSV
Sbjct: 61  GGGGGGGMGMPLGLNLEQGFLRQERFRDELNNNNNNNNTTNNASSSSTASSGITERDSSV 120

Query: 121 QHMNALFPSFGHLQQTQQLRPPPPPLHLHQPFHNQTNPGMVAAVPQPSQIRPRVRARRGQ 180
           QHMNALFPSFGHLQQTQQLRPPPPPLHLHQPFHNQTNPGMVAAVPQPSQIRPRVRARRGQ
Sbjct: 121 QHMNALFPSFGHLQQTQQLRPPPPPLHLHQPFHNQTNPGMVAAVPQPSQIRPRVRARRGQ 180

Query: 181 ATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR 240
           ATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR
Sbjct: 181 ATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR 240

Query: 241 LGGAGAVAQLVADVPLSSVEGEGIESGANQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFL 300
           LGGAGAVAQLVADVPLSSVEGEGIESGANQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFL
Sbjct: 241 LGGAGAVAQLVADVPLSSVEGEGIESGANQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFL 300

Query: 301 QSKALCIMPISLASAIFRTHQADPPIMVKPEMNTP 336
           QSKALCIMPISLASAIFRTHQADPPIMVKPEMNTP
Sbjct: 301 QSKALCIMPISLASAIFRTHQADPPIMVKPEMNTP 335

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BLAST of Carg16488 vs. NCBI nr
Match: XP_022932556.1 (transcription factor UNE12-like [Cucurbita moschata])

HSP 1 Score: 620.9 bits (1600), Expect = 6.3e-174
Identity = 334/335 (99.70%), Postives = 334/335 (99.70%), Query Frame = 0


Query: 1   MAGIPSEGLGDDFFEQILAVQPGYAAGATGDVVSIPMALQLGSGGSGGGGDGLRGIAGLQ 60
           MAGIPSEGLGDDFFEQILAVQPGYAAGATGDVVSIPMALQLGSGGS GGGDGLRGIAGLQ
Sbjct: 1   MAGIPSEGLGDDFFEQILAVQPGYAAGATGDVVSIPMALQLGSGGS-GGGDGLRGIAGLQ 60

Query: 61  GGGGGGGMGMPLGLNLEQGFLRQERFRDELNNNNNNNNTTNNASSSSTASSGITERDSSV 120
           GGGGGGGMGMPLGLNLEQGFLRQERFRDELNNNNNNNNTTNNASSSSTASSGITERDSSV
Sbjct: 61  GGGGGGGMGMPLGLNLEQGFLRQERFRDELNNNNNNNNTTNNASSSSTASSGITERDSSV 120

Query: 121 QHMNALFPSFGHLQQTQQLRPPPPPLHLHQPFHNQTNPGMVAAVPQPSQIRPRVRARRGQ 180
           QHMNALFPSFGHLQQTQQLRPPPPPLHLHQPFHNQTNPGMVAAVPQPSQIRPRVRARRGQ
Sbjct: 121 QHMNALFPSFGHLQQTQQLRPPPPPLHLHQPFHNQTNPGMVAAVPQPSQIRPRVRARRGQ 180

Query: 181 ATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR 240
           ATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR
Sbjct: 181 ATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR 240

Query: 241 LGGAGAVAQLVADVPLSSVEGEGIESGANQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFL 300
           LGGAGAVAQLVADVPLSSVEGEGIESGANQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFL
Sbjct: 241 LGGAGAVAQLVADVPLSSVEGEGIESGANQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFL 300

Query: 301 QSKALCIMPISLASAIFRTHQADPPIMVKPEMNTP 336
           QSKALCIMPISLASAIFRTHQADPPIMVKPEMNTP
Sbjct: 301 QSKALCIMPISLASAIFRTHQADPPIMVKPEMNTP 334

[Close]

BLAST of Carg16488 vs. NCBI nr
Match: XP_022965926.1 (transcription factor UNE12-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 614.4 bits (1583), Expect = 5.9e-172
Identity = 333/336 (99.11%), Postives = 333/336 (99.11%), Query Frame = 0


Query: 1   MAGIPSEGLGDDFFEQILAVQPGYAAGATGDVVSIPMALQLGSGGSGGGGDGLRGIAGLQ 60
           MAGIPSEGLGDDFFEQILAVQPGYAAGATGDVVSIPM LQLGSGG GGGGDGLRGIAGLQ
Sbjct: 1   MAGIPSEGLGDDFFEQILAVQPGYAAGATGDVVSIPMGLQLGSGG-GGGGDGLRGIAGLQ 60

Query: 61  GGGGGGGMGMPLGLNLEQGFLRQERFRDELNNNNNN-NNTTNNASSSSTASSGITERDSS 120
           GGGGGGGMGMPLGLNLEQGFLRQERFRDELNNNNNN NNTTNNASSSSTASSGITERDSS
Sbjct: 61  GGGGGGGMGMPLGLNLEQGFLRQERFRDELNNNNNNSNNTTNNASSSSTASSGITERDSS 120

Query: 121 VQHMNALFPSFGHLQQTQQLRPPPPPLHLHQPFHNQTNPGMVAAVPQPSQIRPRVRARRG 180
           VQHMNALFPSFGHLQQTQQLRPPPPPLHLHQPFHNQTNPGMVAAVPQPSQIRPRVRARRG
Sbjct: 121 VQHMNALFPSFGHLQQTQQLRPPPPPLHLHQPFHNQTNPGMVAAVPQPSQIRPRVRARRG 180

Query: 181 QATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 240
           QATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS
Sbjct: 181 QATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 240

Query: 241 RLGGAGAVAQLVADVPLSSVEGEGIESGANQQAWEKWSSDGTEQQVAKLMEEDVGAAMQF 300
           RLGGAGAVAQLVADVPLSSVEGEGIESGANQQAWEKWSSDGTEQQVAKLMEEDVGAAMQF
Sbjct: 241 RLGGAGAVAQLVADVPLSSVEGEGIESGANQQAWEKWSSDGTEQQVAKLMEEDVGAAMQF 300

Query: 301 LQSKALCIMPISLASAIFRTHQADPPIMVKPEMNTP 336
           LQSKALCIMPISLASAIFRTHQADPPIMVKPEMNTP
Sbjct: 301 LQSKALCIMPISLASAIFRTHQADPPIMVKPEMNTP 335

[Close]

BLAST of Carg16488 vs. NCBI nr
Match: XP_023530730.1 (transcription factor UNE12-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 614.0 bits (1582), Expect = 7.7e-172
Identity = 330/335 (98.51%), Postives = 330/335 (98.51%), Query Frame = 0


Query: 1   MAGIPSEGLGDDFFEQILAVQPGYAAGATGDVVSIPMALQLGSGGSGGGGDGLRGIAGLQ 60
           MAGIPSEGLGDDFFEQILAVQPGYA GATGDVVSIPM LQL   GSGGGGDGLRGIAGLQ
Sbjct: 1   MAGIPSEGLGDDFFEQILAVQPGYAGGATGDVVSIPMGLQL---GSGGGGDGLRGIAGLQ 60

Query: 61  GGGGGGGMGMPLGLNLEQGFLRQERFRDELNNNNNNNNTTNNASSSSTASSGITERDSSV 120
           GGGGGGGMGMPLGLNLEQGFLRQERFRDELNNNNNNNNTTNNASSSSTASSGITERDSSV
Sbjct: 61  GGGGGGGMGMPLGLNLEQGFLRQERFRDELNNNNNNNNTTNNASSSSTASSGITERDSSV 120

Query: 121 QHMNALFPSFGHLQQTQQLRPPPPPLHLHQPFHNQTNPGMVAAVPQPSQIRPRVRARRGQ 180
           QHMNALFPSFGHLQQTQQLRPPPPPLHLHQPFHNQTNPGMVAAVPQPSQIRPRVRARRGQ
Sbjct: 121 QHMNALFPSFGHLQQTQQLRPPPPPLHLHQPFHNQTNPGMVAAVPQPSQIRPRVRARRGQ 180

Query: 181 ATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR 240
           ATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR
Sbjct: 181 ATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR 240

Query: 241 LGGAGAVAQLVADVPLSSVEGEGIESGANQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFL 300
           LGGAGAVAQLVADVPLSSVEGEGIESGANQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFL
Sbjct: 241 LGGAGAVAQLVADVPLSSVEGEGIESGANQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFL 300

Query: 301 QSKALCIMPISLASAIFRTHQADPPIMVKPEMNTP 336
           QSKALCIMPISLASAIFRTHQADPPIMVKPEMNTP
Sbjct: 301 QSKALCIMPISLASAIFRTHQADPPIMVKPEMNTP 332

[Close]

BLAST of Carg16488 vs. NCBI nr
Match: XP_004135655.1 (transcription factor UNE12 [Cucumis sativus] >KGN66149.1 hypothetical protein Csa_007060 [Cucumis sativus])

HSP 1 Score: 515.8 bits (1327), Expect = 2.9e-142
Identity = 284/335 (84.78%), Postives = 299/335 (89.25%), Query Frame = 0


Query: 1   MAGIPSEGLGDDFFEQILAVQPGYAAGATGDVVSIPMALQLGSGGSGGGGDGLRGIAGLQ 60
           MAGIPSEGLGDDFFEQ+LAV P Y     GD+VS+PM LQLGSGG               
Sbjct: 1   MAGIPSEGLGDDFFEQMLAVPPSYGGAGGGDMVSLPMGLQLGSGGG-------------- 60

Query: 61  GGGGGGGMGMPLGLNLEQGFLRQERFRDELNNNNNNNNTTNNASSSSTASSGITERDSSV 120
           GGG GGGMGMPLGLNLEQGFLRQERFR+E+ +  +N+N+ NNASSSSTASSGITERDSS+
Sbjct: 61  GGGNGGGMGMPLGLNLEQGFLRQERFREEV-DGGHNSNSNNNASSSSTASSGITERDSSM 120

Query: 121 QHMNALFPSFGHLQQTQQLRPPPPPLHLHQPFHNQTNPGMVAAVPQPSQIRPRVRARRGQ 180
           QHM +LFP+FGHL QTQQLR PPPPLHLHQPFHNQTN G VAA+PQP Q+RPRVRARRGQ
Sbjct: 121 QHMTSLFPTFGHL-QTQQLR-PPPPLHLHQPFHNQTNTGTVAAIPQPPQVRPRVRARRGQ 180

Query: 181 ATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR 240
           ATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR
Sbjct: 181 ATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR 240

Query: 241 LGGAGAVAQLVADVPLSSVEGEGIESGANQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFL 300
           LGGAGAVAQLVADVPLSSVEGEGIESG NQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFL
Sbjct: 241 LGGAGAVAQLVADVPLSSVEGEGIESGNNQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFL 300

Query: 301 QSKALCIMPISLASAIFRTHQADPPIMVKPEMNTP 336
           QSKALCIMPISLASAIFRTHQADP I+VKPEMNTP
Sbjct: 301 QSKALCIMPISLASAIFRTHQADPQILVKPEMNTP 318

[Close]

BLAST of Carg16488 vs. ExPASy Swiss-Prot
Match: O22768 (Transcription factor UNE12 OS=Arabidopsis thaliana OX=3702 GN=UNE12 PE=1 SV=2)

HSP 1 Score: 246.5 bits (628), Expect = 4.2e-64
Identity = 184/340 (54.12%), Postives = 210/340 (61.76%), Query Frame = 0


Query: 11  DDFFEQILAVQPGYAAGATGDVVSI---------PMALQLGSGGSGGGGDGLRGIAGLQG 70
           DDFFEQIL + P ++A +   +  +         PM LQLGSG  G    GL G     G
Sbjct: 17  DDFFEQILGL-PNFSASSAAGLSGVDGGLGGGAPPMMLQLGSGEEGSHMGGLGG----SG 76

Query: 71  GGGGGGMGMPLGLNLEQ----GFLRQERFRDELNNNNNNNNTTNNASSSSTASSGITERD 130
             G      PLGL+L+Q    GFLR E                 + S    +   +  R 
Sbjct: 77  PTGFHNQMFPLGLSLDQGKGPGFLRPE---------------GGHGSGKRFSDDVVDNRC 136

Query: 131 SSVQHMNALFPSFGHLQQTQQLRPPPPPLHLHQPFHNQTNPGMVAAVPQPSQIRPRVRAR 190
           SS++      P F H Q  QQ  PPP   H                  QP+ IRPRVRAR
Sbjct: 137 SSMK------PVF-HGQPMQQ--PPPSAPH------------------QPTSIRPRVRAR 196

Query: 191 RGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 250
           RGQATDPHSIAERLRRERIAER++ALQELVP+ NKTDRAAM+DEIVDYVKFLRLQVKVLS
Sbjct: 197 RGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLS 256

Query: 251 MSRLGGAGAVAQLVADVPL-SSVEGEGIESGAN-QQAWEKWSSDGTEQQVAKLMEEDVGA 310
           MSRLGGAGAVA LV D+PL SSVE E  E G   Q AWEKWS+DGTE+QVAKLMEE+VGA
Sbjct: 257 MSRLGGAGAVAPLVTDMPLSSSVEDETGEGGRTPQPAWEKWSNDGTERQVAKLMEENVGA 309

Query: 311 AMQFLQSKALCIMPISLASAIFRTHQADPPIMVKPEMNTP 336
           AMQ LQSKALC+MPISLA AI+ +   D   +VKPE N P
Sbjct: 317 AMQLLQSKALCMMPISLAMAIYHSQPPDTSSVVKPENNPP 309

[Close]

BLAST of Carg16488 vs. ExPASy Swiss-Prot
Match: Q93Y00 (Transcription factor bHLH7 OS=Arabidopsis thaliana OX=3702 GN=BHLH7 PE=1 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 5.2e-62
Identity = 182/343 (53.06%), Postives = 206/343 (60.06%), Query Frame = 0


Query: 11  DDFFEQILAV-----QPGYAAGATGDVVSIPMALQLGSGGSGGGGDGLRGIAGLQGGGGG 70
           DDFFEQIL +       G      G V   PM LQLGSG  G          G  GGGG 
Sbjct: 19  DDFFEQILGLSNFSGSSGSGLSGIGGVGPPPMMLQLGSGNEGN-----HNHMGAIGGGGP 78

Query: 71  GGMG---MPLGLNLEQ----GFLRQE----RFRDELNNNNNNNNTTNNASSSSTASSGIT 130
            G      PLGL+L+Q    GFL+ +    RF+D++ +N                     
Sbjct: 79  VGFHNQMFPLGLSLDQGKGHGFLKPDETGKRFQDDVLDN--------------------- 138

Query: 131 ERDSSVQHMNALFPSFGHLQQTQQLRPPPPPLHLHQPFHNQTNPGMVAAVPQPSQIRPRV 190
            R SS++      P F H Q   Q  PP P                     Q S IRPRV
Sbjct: 139 -RCSSMK------PIF-HGQPMSQPAPPMP--------------------HQQSTIRPRV 198

Query: 191 RARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVK 250
           RARRGQATDPHSIAERLRRERIAER+++LQELVP+ NKTDRAAM+DEIVDYVKFLRLQVK
Sbjct: 199 RARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLRLQVK 258

Query: 251 VLSMSRLGGAGAVAQLVADVPL-SSVEGEGIESGANQQAWEKWSSDGTEQQVAKLMEEDV 310
           VLSMSRLGGAGAVA LV ++PL SSVE E       Q  WEKWS+DGTE+QVAKLMEE+V
Sbjct: 259 VLSMSRLGGAGAVAPLVTEMPLSSSVEDE------TQAVWEKWSNDGTERQVAKLMEENV 301

Query: 311 GAAMQFLQSKALCIMPISLASAIFRTHQAD-PPIMVKPEMNTP 336
           GAAMQ LQSKALCIMPISLA AI+ +   D    +VKPEMN P
Sbjct: 319 GAAMQLLQSKALCIMPISLAMAIYHSQPPDTSSSIVKPEMNPP 301

[Close]

BLAST of Carg16488 vs. ExPASy Swiss-Prot
Match: D0PX88 (bHLH transcription factor RHL1 OS=Lotus japonicus OX=34305 GN=RHL1 PE=2 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 4.9e-44
Identity = 123/223 (55.16%), Postives = 143/223 (64.13%), Query Frame = 0


Query: 115 ERDSSVQHMNALFPSFGHLQQTQQLRPPPPPLHLHQ------PFHNQTNP--GMVAAVPQ 174
           E  +SVQ +   F    +  Q QQ    PP  + +Q         NQ  P  G       
Sbjct: 107 EASASVQALYNGFTGSLNGTQPQQHFQHPPQGNSNQIQGQNFGATNQAPPASGSAGGGGN 166

Query: 175 PSQIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYV 234
             Q +PRVRARRGQATDPHSIAERLRRERIAERMKALQELVP+ NKTD+A+MLDEI+DYV
Sbjct: 167 QGQAKPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYV 226

Query: 235 KFLRLQVKVLSMSRLGGAGAVAQLVADVPLSSVEGEG----IESGA---------NQQAW 294
           KFL+LQVKVLSMSRLGGA AVA LVAD+      G G    + +GA            + 
Sbjct: 227 KFLQLQVKVLSMSRLGGAAAVAPLVADISSEGGGGGGGGDCVTNGAGGVLPRSTTTAAST 286

Query: 295 EKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAI 317
              S   TE QVAKLMEED+G+AMQ+LQ K LC+MPISLA+AI
Sbjct: 287 TNDSLTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAI 329

[Close]

BLAST of Carg16488 vs. ExPASy Swiss-Prot
Match: Q9ZUG9 (Transcription factor LRL1 OS=Arabidopsis thaliana OX=3702 GN=LRL1 PE=1 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 6.4e-44
Identity = 105/159 (66.04%), Postives = 123/159 (77.36%), Query Frame = 0


Query: 159 GMVAAVPQPSQIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAM 218
           G VAA   P Q R ++RARRGQATDPHSIAERLRRERIAERMKALQELVP+ NKTD+A+M
Sbjct: 126 GTVAA---PPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASM 185

Query: 219 LDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLSSVEGEGIESGANQQAWEKWSS 278
           LDEI+DYVKFL+LQVKVLSMSRLGGA +V+  +++   S         G +Q A     S
Sbjct: 186 LDEIIDYVKFLQLQVKVLSMSRLGGAASVSSQISEAGGSHGNASSAMVGGSQTAGNSNDS 245

Query: 279 -DGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAI 317
              TE QVAKLMEED+G+AMQ+LQ K LC+MPISLA+AI
Sbjct: 246 VTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAI 281

[Close]

BLAST of Carg16488 vs. ExPASy Swiss-Prot
Match: Q9LSQ3 (Transcription factor LRL3 OS=Arabidopsis thaliana OX=3702 GN=LRL3 PE=2 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.6e-42
Identity = 99/159 (62.26%), Postives = 122/159 (76.73%), Query Frame = 0


Query: 171 RPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLR 230
           +PRVRARRGQATDPHSIAERLRRERIAERMK+LQELVP+ NKTD+A+MLDEI++YV+FL+
Sbjct: 96  KPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQ 155

Query: 231 LQVKVLSMSRLGGAGAVAQLV-------------ADVPLSSVEGEGIESGANQQAWEKWS 290
           LQVKVLSMSRLGGAG+V   +                P + + G G  +G++ +     S
Sbjct: 156 LQVKVLSMSRLGGAGSVGPRLNGLSAEAGGRLNALTAPCNGLNGNGNATGSSNE-----S 215

Query: 291 SDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAI 317
              TEQ+VAKLMEED+G+AMQ+LQ K LC+MPISLA+AI
Sbjct: 216 LRSTEQRVAKLMEEDMGSAMQYLQGKGLCLMPISLATAI 249

[Close]

BLAST of Carg16488 vs. ExPASy TrEMBL
Match: A0A6J1EWN8 (transcription factor UNE12-like OS=Cucurbita moschata OX=3662 GN=LOC111439044 PE=4 SV=1)

HSP 1 Score: 620.9 bits (1600), Expect = 3.0e-174
Identity = 334/335 (99.70%), Postives = 334/335 (99.70%), Query Frame = 0


Query: 1   MAGIPSEGLGDDFFEQILAVQPGYAAGATGDVVSIPMALQLGSGGSGGGGDGLRGIAGLQ 60
           MAGIPSEGLGDDFFEQILAVQPGYAAGATGDVVSIPMALQLGSGGS GGGDGLRGIAGLQ
Sbjct: 1   MAGIPSEGLGDDFFEQILAVQPGYAAGATGDVVSIPMALQLGSGGS-GGGDGLRGIAGLQ 60

Query: 61  GGGGGGGMGMPLGLNLEQGFLRQERFRDELNNNNNNNNTTNNASSSSTASSGITERDSSV 120
           GGGGGGGMGMPLGLNLEQGFLRQERFRDELNNNNNNNNTTNNASSSSTASSGITERDSSV
Sbjct: 61  GGGGGGGMGMPLGLNLEQGFLRQERFRDELNNNNNNNNTTNNASSSSTASSGITERDSSV 120

Query: 121 QHMNALFPSFGHLQQTQQLRPPPPPLHLHQPFHNQTNPGMVAAVPQPSQIRPRVRARRGQ 180
           QHMNALFPSFGHLQQTQQLRPPPPPLHLHQPFHNQTNPGMVAAVPQPSQIRPRVRARRGQ
Sbjct: 121 QHMNALFPSFGHLQQTQQLRPPPPPLHLHQPFHNQTNPGMVAAVPQPSQIRPRVRARRGQ 180

Query: 181 ATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR 240
           ATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR
Sbjct: 181 ATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR 240

Query: 241 LGGAGAVAQLVADVPLSSVEGEGIESGANQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFL 300
           LGGAGAVAQLVADVPLSSVEGEGIESGANQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFL
Sbjct: 241 LGGAGAVAQLVADVPLSSVEGEGIESGANQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFL 300

Query: 301 QSKALCIMPISLASAIFRTHQADPPIMVKPEMNTP 336
           QSKALCIMPISLASAIFRTHQADPPIMVKPEMNTP
Sbjct: 301 QSKALCIMPISLASAIFRTHQADPPIMVKPEMNTP 334

[Close]

BLAST of Carg16488 vs. ExPASy TrEMBL
Match: A0A6J1HMZ7 (transcription factor UNE12-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465659 PE=4 SV=1)

HSP 1 Score: 614.4 bits (1583), Expect = 2.9e-172
Identity = 333/336 (99.11%), Postives = 333/336 (99.11%), Query Frame = 0


Query: 1   MAGIPSEGLGDDFFEQILAVQPGYAAGATGDVVSIPMALQLGSGGSGGGGDGLRGIAGLQ 60
           MAGIPSEGLGDDFFEQILAVQPGYAAGATGDVVSIPM LQLGSGG GGGGDGLRGIAGLQ
Sbjct: 1   MAGIPSEGLGDDFFEQILAVQPGYAAGATGDVVSIPMGLQLGSGG-GGGGDGLRGIAGLQ 60

Query: 61  GGGGGGGMGMPLGLNLEQGFLRQERFRDELNNNNNN-NNTTNNASSSSTASSGITERDSS 120
           GGGGGGGMGMPLGLNLEQGFLRQERFRDELNNNNNN NNTTNNASSSSTASSGITERDSS
Sbjct: 61  GGGGGGGMGMPLGLNLEQGFLRQERFRDELNNNNNNSNNTTNNASSSSTASSGITERDSS 120

Query: 121 VQHMNALFPSFGHLQQTQQLRPPPPPLHLHQPFHNQTNPGMVAAVPQPSQIRPRVRARRG 180
           VQHMNALFPSFGHLQQTQQLRPPPPPLHLHQPFHNQTNPGMVAAVPQPSQIRPRVRARRG
Sbjct: 121 VQHMNALFPSFGHLQQTQQLRPPPPPLHLHQPFHNQTNPGMVAAVPQPSQIRPRVRARRG 180

Query: 181 QATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 240
           QATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS
Sbjct: 181 QATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 240

Query: 241 RLGGAGAVAQLVADVPLSSVEGEGIESGANQQAWEKWSSDGTEQQVAKLMEEDVGAAMQF 300
           RLGGAGAVAQLVADVPLSSVEGEGIESGANQQAWEKWSSDGTEQQVAKLMEEDVGAAMQF
Sbjct: 241 RLGGAGAVAQLVADVPLSSVEGEGIESGANQQAWEKWSSDGTEQQVAKLMEEDVGAAMQF 300

Query: 301 LQSKALCIMPISLASAIFRTHQADPPIMVKPEMNTP 336
           LQSKALCIMPISLASAIFRTHQADPPIMVKPEMNTP
Sbjct: 301 LQSKALCIMPISLASAIFRTHQADPPIMVKPEMNTP 335

[Close]

BLAST of Carg16488 vs. ExPASy TrEMBL
Match: A0A0A0LYN0 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G573680 PE=4 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 1.4e-142
Identity = 284/335 (84.78%), Postives = 299/335 (89.25%), Query Frame = 0


Query: 1   MAGIPSEGLGDDFFEQILAVQPGYAAGATGDVVSIPMALQLGSGGSGGGGDGLRGIAGLQ 60
           MAGIPSEGLGDDFFEQ+LAV P Y     GD+VS+PM LQLGSGG               
Sbjct: 1   MAGIPSEGLGDDFFEQMLAVPPSYGGAGGGDMVSLPMGLQLGSGGG-------------- 60

Query: 61  GGGGGGGMGMPLGLNLEQGFLRQERFRDELNNNNNNNNTTNNASSSSTASSGITERDSSV 120
           GGG GGGMGMPLGLNLEQGFLRQERFR+E+ +  +N+N+ NNASSSSTASSGITERDSS+
Sbjct: 61  GGGNGGGMGMPLGLNLEQGFLRQERFREEV-DGGHNSNSNNNASSSSTASSGITERDSSM 120

Query: 121 QHMNALFPSFGHLQQTQQLRPPPPPLHLHQPFHNQTNPGMVAAVPQPSQIRPRVRARRGQ 180
           QHM +LFP+FGHL QTQQLR PPPPLHLHQPFHNQTN G VAA+PQP Q+RPRVRARRGQ
Sbjct: 121 QHMTSLFPTFGHL-QTQQLR-PPPPLHLHQPFHNQTNTGTVAAIPQPPQVRPRVRARRGQ 180

Query: 181 ATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR 240
           ATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR
Sbjct: 181 ATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR 240

Query: 241 LGGAGAVAQLVADVPLSSVEGEGIESGANQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFL 300
           LGGAGAVAQLVADVPLSSVEGEGIESG NQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFL
Sbjct: 241 LGGAGAVAQLVADVPLSSVEGEGIESGNNQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFL 300

Query: 301 QSKALCIMPISLASAIFRTHQADPPIMVKPEMNTP 336
           QSKALCIMPISLASAIFRTHQADP I+VKPEMNTP
Sbjct: 301 QSKALCIMPISLASAIFRTHQADPQILVKPEMNTP 318

[Close]

BLAST of Carg16488 vs. ExPASy TrEMBL
Match: A0A5D3CG28 (Transcription factor UNE12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003230 PE=4 SV=1)

HSP 1 Score: 515.0 bits (1325), Expect = 2.4e-142
Identity = 285/335 (85.07%), Postives = 298/335 (88.96%), Query Frame = 0


Query: 1   MAGIPSEGLGDDFFEQILAVQPGYAAGATGDVVSIPMALQLGSGGSGGGGDGLRGIAGLQ 60
           MAGIPSEGLGDDFFEQ+LAV P Y     GD+VS+PM LQLGSGG               
Sbjct: 1   MAGIPSEGLGDDFFEQMLAVPPSYGGAGGGDMVSLPMGLQLGSGGG-------------- 60

Query: 61  GGGGGGGMGMPLGLNLEQGFLRQERFRDELNNNNNNNNTTNNASSSSTASSGITERDSSV 120
           GGG GGGMGMPLGLNLEQGFLRQERFR+E+ +  +N+N+ NNASSSSTASSGITERDSS+
Sbjct: 61  GGGNGGGMGMPLGLNLEQGFLRQERFREEV-DGGHNSNSNNNASSSSTASSGITERDSSM 120

Query: 121 QHMNALFPSFGHLQQTQQLRPPPPPLHLHQPFHNQTNPGMVAAVPQPSQIRPRVRARRGQ 180
           QHM  LFP+FGHL QTQQLR PPPPLHLHQPFHNQTN G VAAVPQP Q+RPRVRARRGQ
Sbjct: 121 QHMTNLFPTFGHL-QTQQLR-PPPPLHLHQPFHNQTNTGTVAAVPQPPQVRPRVRARRGQ 180

Query: 181 ATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR 240
           ATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR
Sbjct: 181 ATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR 240

Query: 241 LGGAGAVAQLVADVPLSSVEGEGIESGANQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFL 300
           LGGAGAVAQLVADVPLSSVEGEGIESG NQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFL
Sbjct: 241 LGGAGAVAQLVADVPLSSVEGEGIESGNNQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFL 300

Query: 301 QSKALCIMPISLASAIFRTHQADPPIMVKPEMNTP 336
           QSKALCIMPISLASAIFRTHQADP I+VKPEMNTP
Sbjct: 301 QSKALCIMPISLASAIFRTHQADPQILVKPEMNTP 318

[Close]

BLAST of Carg16488 vs. ExPASy TrEMBL
Match: A0A1S3BPY4 (transcription factor UNE12-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492234 PE=4 SV=1)

HSP 1 Score: 515.0 bits (1325), Expect = 2.4e-142
Identity = 285/335 (85.07%), Postives = 298/335 (88.96%), Query Frame = 0


Query: 1   MAGIPSEGLGDDFFEQILAVQPGYAAGATGDVVSIPMALQLGSGGSGGGGDGLRGIAGLQ 60
           MAGIPSEGLGDDFFEQ+LAV P Y     GD+VS+PM LQLGSGG               
Sbjct: 1   MAGIPSEGLGDDFFEQMLAVPPSYGGAGGGDMVSLPMGLQLGSGGG-------------- 60

Query: 61  GGGGGGGMGMPLGLNLEQGFLRQERFRDELNNNNNNNNTTNNASSSSTASSGITERDSSV 120
           GGG GGGMGMPLGLNLEQGFLRQERFR+E+ +  +N+N+ NNASSSSTASSGITERDSS+
Sbjct: 61  GGGNGGGMGMPLGLNLEQGFLRQERFREEV-DGGHNSNSNNNASSSSTASSGITERDSSM 120

Query: 121 QHMNALFPSFGHLQQTQQLRPPPPPLHLHQPFHNQTNPGMVAAVPQPSQIRPRVRARRGQ 180
           QHM  LFP+FGHL QTQQLR PPPPLHLHQPFHNQTN G VAAVPQP Q+RPRVRARRGQ
Sbjct: 121 QHMTNLFPTFGHL-QTQQLR-PPPPLHLHQPFHNQTNTGTVAAVPQPPQVRPRVRARRGQ 180

Query: 181 ATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR 240
           ATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR
Sbjct: 181 ATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR 240

Query: 241 LGGAGAVAQLVADVPLSSVEGEGIESGANQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFL 300
           LGGAGAVAQLVADVPLSSVEGEGIESG NQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFL
Sbjct: 241 LGGAGAVAQLVADVPLSSVEGEGIESGNNQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFL 300

Query: 301 QSKALCIMPISLASAIFRTHQADPPIMVKPEMNTP 336
           QSKALCIMPISLASAIFRTHQADP I+VKPEMNTP
Sbjct: 301 QSKALCIMPISLASAIFRTHQADPQILVKPEMNTP 318

[Close]

BLAST of Carg16488 vs. TAIR 10
Match: AT4G02590.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 246.5 bits (628), Expect = 3.0e-65
Identity = 184/340 (54.12%), Postives = 210/340 (61.76%), Query Frame = 0


Query: 11  DDFFEQILAVQPGYAAGATGDVVSI---------PMALQLGSGGSGGGGDGLRGIAGLQG 70
           DDFFEQIL + P ++A +   +  +         PM LQLGSG  G    GL G     G
Sbjct: 17  DDFFEQILGL-PNFSASSAAGLSGVDGGLGGGAPPMMLQLGSGEEGSHMGGLGG----SG 76

Query: 71  GGGGGGMGMPLGLNLEQ----GFLRQERFRDELNNNNNNNNTTNNASSSSTASSGITERD 130
             G      PLGL+L+Q    GFLR E                 + S    +   +  R 
Sbjct: 77  PTGFHNQMFPLGLSLDQGKGPGFLRPE---------------GGHGSGKRFSDDVVDNRC 136

Query: 131 SSVQHMNALFPSFGHLQQTQQLRPPPPPLHLHQPFHNQTNPGMVAAVPQPSQIRPRVRAR 190
           SS++      P F H Q  QQ  PPP   H                  QP+ IRPRVRAR
Sbjct: 137 SSMK------PVF-HGQPMQQ--PPPSAPH------------------QPTSIRPRVRAR 196

Query: 191 RGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 250
           RGQATDPHSIAERLRRERIAER++ALQELVP+ NKTDRAAM+DEIVDYVKFLRLQVKVLS
Sbjct: 197 RGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLS 256

Query: 251 MSRLGGAGAVAQLVADVPL-SSVEGEGIESGAN-QQAWEKWSSDGTEQQVAKLMEEDVGA 310
           MSRLGGAGAVA LV D+PL SSVE E  E G   Q AWEKWS+DGTE+QVAKLMEE+VGA
Sbjct: 257 MSRLGGAGAVAPLVTDMPLSSSVEDETGEGGRTPQPAWEKWSNDGTERQVAKLMEENVGA 309

Query: 311 AMQFLQSKALCIMPISLASAIFRTHQADPPIMVKPEMNTP 336
           AMQ LQSKALC+MPISLA AI+ +   D   +VKPE N P
Sbjct: 317 AMQLLQSKALCMMPISLAMAIYHSQPPDTSSVVKPENNPP 309

[Close]

BLAST of Carg16488 vs. TAIR 10
Match: AT4G02590.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 246.5 bits (628), Expect = 3.0e-65
Identity = 184/340 (54.12%), Postives = 210/340 (61.76%), Query Frame = 0


Query: 11  DDFFEQILAVQPGYAAGATGDVVSI---------PMALQLGSGGSGGGGDGLRGIAGLQG 70
           DDFFEQIL + P ++A +   +  +         PM LQLGSG  G    GL G     G
Sbjct: 17  DDFFEQILGL-PNFSASSAAGLSGVDGGLGGGAPPMMLQLGSGEEGSHMGGLGG----SG 76

Query: 71  GGGGGGMGMPLGLNLEQ----GFLRQERFRDELNNNNNNNNTTNNASSSSTASSGITERD 130
             G      PLGL+L+Q    GFLR E                 + S    +   +  R 
Sbjct: 77  PTGFHNQMFPLGLSLDQGKGPGFLRPE---------------GGHGSGKRFSDDVVDNRC 136

Query: 131 SSVQHMNALFPSFGHLQQTQQLRPPPPPLHLHQPFHNQTNPGMVAAVPQPSQIRPRVRAR 190
           SS++      P F H Q  QQ  PPP   H                  QP+ IRPRVRAR
Sbjct: 137 SSMK------PVF-HGQPMQQ--PPPSAPH------------------QPTSIRPRVRAR 196

Query: 191 RGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLS 250
           RGQATDPHSIAERLRRERIAER++ALQELVP+ NKTDRAAM+DEIVDYVKFLRLQVKVLS
Sbjct: 197 RGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLS 256

Query: 251 MSRLGGAGAVAQLVADVPL-SSVEGEGIESGAN-QQAWEKWSSDGTEQQVAKLMEEDVGA 310
           MSRLGGAGAVA LV D+PL SSVE E  E G   Q AWEKWS+DGTE+QVAKLMEE+VGA
Sbjct: 257 MSRLGGAGAVAPLVTDMPLSSSVEDETGEGGRTPQPAWEKWSNDGTERQVAKLMEENVGA 309

Query: 311 AMQFLQSKALCIMPISLASAIFRTHQADPPIMVKPEMNTP 336
           AMQ LQSKALC+MPISLA AI+ +   D   +VKPE N P
Sbjct: 317 AMQLLQSKALCMMPISLAMAIYHSQPPDTSSVVKPENNPP 309

[Close]

BLAST of Carg16488 vs. TAIR 10
Match: AT1G03040.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 239.6 bits (610), Expect = 3.7e-63
Identity = 182/343 (53.06%), Postives = 206/343 (60.06%), Query Frame = 0


Query: 11  DDFFEQILAV-----QPGYAAGATGDVVSIPMALQLGSGGSGGGGDGLRGIAGLQGGGGG 70
           DDFFEQIL +       G      G V   PM LQLGSG  G          G  GGGG 
Sbjct: 19  DDFFEQILGLSNFSGSSGSGLSGIGGVGPPPMMLQLGSGNEGN-----HNHMGAIGGGGP 78

Query: 71  GGMG---MPLGLNLEQ----GFLRQE----RFRDELNNNNNNNNTTNNASSSSTASSGIT 130
            G      PLGL+L+Q    GFL+ +    RF+D++ +N                     
Sbjct: 79  VGFHNQMFPLGLSLDQGKGHGFLKPDETGKRFQDDVLDN--------------------- 138

Query: 131 ERDSSVQHMNALFPSFGHLQQTQQLRPPPPPLHLHQPFHNQTNPGMVAAVPQPSQIRPRV 190
            R SS++      P F H Q   Q  PP P                     Q S IRPRV
Sbjct: 139 -RCSSMK------PIF-HGQPMSQPAPPMP--------------------HQQSTIRPRV 198

Query: 191 RARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVK 250
           RARRGQATDPHSIAERLRRERIAER+++LQELVP+ NKTDRAAM+DEIVDYVKFLRLQVK
Sbjct: 199 RARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLRLQVK 258

Query: 251 VLSMSRLGGAGAVAQLVADVPL-SSVEGEGIESGANQQAWEKWSSDGTEQQVAKLMEEDV 310
           VLSMSRLGGAGAVA LV ++PL SSVE E       Q  WEKWS+DGTE+QVAKLMEE+V
Sbjct: 259 VLSMSRLGGAGAVAPLVTEMPLSSSVEDE------TQAVWEKWSNDGTERQVAKLMEENV 301

Query: 311 GAAMQFLQSKALCIMPISLASAIFRTHQAD-PPIMVKPEMNTP 336
           GAAMQ LQSKALCIMPISLA AI+ +   D    +VKPEMN P
Sbjct: 319 GAAMQLLQSKALCIMPISLAMAIYHSQPPDTSSSIVKPEMNPP 301

[Close]

BLAST of Carg16488 vs. TAIR 10
Match: AT4G02590.3 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 232.6 bits (592), Expect = 4.5e-61
Identity = 165/288 (57.29%), Postives = 186/288 (64.58%), Query Frame = 0


Query: 56  IAGLQGGGGGG--GMGMPLGLNLEQ----GFLRQERFRDELNNNNNNNNTTNNASSSSTA 115
           + GL G G  G      PLGL+L+Q    GFLR E                 + S    +
Sbjct: 1   MGGLGGSGPTGFHNQMFPLGLSLDQGKGPGFLRPE---------------GGHGSGKRFS 60

Query: 116 SSGITERDSSVQHMNALFPSFGHLQQTQQLRPPPPPLHLHQPFHNQTNPGMVAAVPQPSQ 175
              +  R SS++      P F H Q  QQ  PPP   H                  QP+ 
Sbjct: 61  DDVVDNRCSSMK------PVF-HGQPMQQ--PPPSAPH------------------QPTS 120

Query: 176 IRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFL 235
           IRPRVRARRGQATDPHSIAERLRRERIAER++ALQELVP+ NKTDRAAM+DEIVDYVKFL
Sbjct: 121 IRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFL 180

Query: 236 RLQVKVLSMSRLGGAGAVAQLVADVPL-SSVEGEGIESGAN-QQAWEKWSSDGTEQQVAK 295
           RLQVKVLSMSRLGGAGAVA LV D+PL SSVE E  E G   Q AWEKWS+DGTE+QVAK
Sbjct: 181 RLQVKVLSMSRLGGAGAVAPLVTDMPLSSSVEDETGEGGRTPQPAWEKWSNDGTERQVAK 240

Query: 296 LMEEDVGAAMQFLQSKALCIMPISLASAIFRTHQADPPIMVKPEMNTP 336
           LMEE+VGAAMQ LQSKALC+MPISLA AI+ +   D   +VKPE N P
Sbjct: 241 LMEENVGAAMQLLQSKALCMMPISLAMAIYHSQPPDTSSVVKPENNPP 246

[Close]

BLAST of Carg16488 vs. TAIR 10
Match: AT1G03040.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 229.6 bits (584), Expect = 3.8e-60
Identity = 175/335 (52.24%), Postives = 194/335 (57.91%), Query Frame = 0


Query: 11  DDFFEQILAV-----QPGYAAGATGDVVSIPMALQLGSGGSGGGGDGLRGIAGLQGGGGG 70
           DDFFEQIL +       G      G V   PM LQLGSG  G          G  GGGG 
Sbjct: 19  DDFFEQILGLSNFSGSSGSGLSGIGGVGPPPMMLQLGSGNEGN-----HNHMGAIGGGGP 78

Query: 71  GGMG---MPLGLNLEQGFLRQERFRDELNNNNNNNNTTNNASSSSTASSGITERDSSVQH 130
            G      PLGL+L+QG        DE      ++   N  SS     S           
Sbjct: 79  VGFHNQMFPLGLSLDQGKGHGFLKPDETGKRFQDDVLDNRCSSMKPPMS----------- 138

Query: 131 MNALFPSFGHLQQTQQLRPPPPPLHLHQPFHNQTNPGMVAAVPQPSQIRPRVRARRGQAT 190
                            +P PP  H                  Q S IRPRVRARRGQAT
Sbjct: 139 -----------------QPAPPMPH------------------QQSTIRPRVRARRGQAT 198

Query: 191 DPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLG 250
           DPHSIAERLRRERIAER+++LQELVP+ NKTDRAAM+DEIVDYVKFLRLQVKVLSMSRLG
Sbjct: 199 DPHSIAERLRRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLG 258

Query: 251 GAGAVAQLVADVPL-SSVEGEGIESGANQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFLQ 310
           GAGAVA LV ++PL SSVE E       Q  WEKWS+DGTE+QVAKLMEE+VGAAMQ LQ
Sbjct: 259 GAGAVAPLVTEMPLSSSVEDE------TQAVWEKWSNDGTERQVAKLMEENVGAAMQLLQ 296

Query: 311 SKALCIMPISLASAIFRTHQAD-PPIMVKPEMNTP 336
           SKALCIMPISLA AI+ +   D    +VKPEMN P
Sbjct: 319 SKALCIMPISLAMAIYHSQPPDTSSSIVKPEMNPP 296

The following BLAST results are available for this feature:

BLAST of Carg16488 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6588321.1	1.1e-175	100.00	Transcription factor UNE12, partial [Cucurbita argyrosperma subsp. sororia] >KAG...	[more]
XP_022932556.1	6.3e-174	99.70	transcription factor UNE12-like [Cucurbita moschata]	[more]
XP_022965926.1	5.9e-172	99.11	transcription factor UNE12-like isoform X1 [Cucurbita maxima]	[more]
XP_023530730.1	7.7e-172	98.51	transcription factor UNE12-like [Cucurbita pepo subsp. pepo]	[more]
XP_004135655.1	2.9e-142	84.78	transcription factor UNE12 [Cucumis sativus] >KGN66149.1 hypothetical protein Cs...	[more]

BLAST of Carg16488 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22768	4.2e-64	54.12	Transcription factor UNE12 OS=Arabidopsis thaliana OX=3702 GN=UNE12 PE=1 SV=2	[more]
Q93Y00	5.2e-62	53.06	Transcription factor bHLH7 OS=Arabidopsis thaliana OX=3702 GN=BHLH7 PE=1 SV=1	[more]
D0PX88	4.9e-44	55.16	bHLH transcription factor RHL1 OS=Lotus japonicus OX=34305 GN=RHL1 PE=2 SV=1	[more]
Q9ZUG9	6.4e-44	66.04	Transcription factor LRL1 OS=Arabidopsis thaliana OX=3702 GN=LRL1 PE=1 SV=1	[more]
Q9LSQ3	1.6e-42	62.26	Transcription factor LRL3 OS=Arabidopsis thaliana OX=3702 GN=LRL3 PE=2 SV=1	[more]

BLAST of Carg16488 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EWN8	3.0e-174	99.70	transcription factor UNE12-like OS=Cucurbita moschata OX=3662 GN=LOC111439044 PE...	[more]
A0A6J1HMZ7	2.9e-172	99.11	transcription factor UNE12-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A0A0LYN0	1.4e-142	84.78	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G573680 PE=4 S...	[more]
A0A5D3CG28	2.4e-142	85.07	Transcription factor UNE12-like isoform X1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3BPY4	2.4e-142	85.07	transcription factor UNE12-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034922...	[more]

BLAST of Carg16488 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02590.1	3.0e-65	54.12	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G02590.2	3.0e-65	54.12	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G03040.1	3.7e-63	53.06	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G02590.3	4.5e-61	57.29	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G03040.2	3.8e-60	52.24	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 186..235 e-value: 6.6E-12 score: 55.6
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 185..229 e-value: 7.4E-8 score: 32.3
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 180..229 score: 16.526237
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 173..230 e-value: 3.4E-14 score: 54.4
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 178..239
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..117
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 7..324
None	No IPR available	PANTHER	PTHR16223:SF198	DEHYDROGENASE, PUTATIVE, EXPRESSED-RELATED	coord: 7..324

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16488-RA	Carg16488-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding