Carg16374 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16374
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	transcription factor RAX3-like
Location	Carg_Chr12: 3738364 .. 3739476 (-)
RNA-Seq Expression	Carg16374
Synteny	Carg16374

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAGAGCTCCTTGCTGTGACAAAGCCAATGTCAAGAAAGGCCCATGGTCTGCTGAAGAAGACACCAAGCTCAAGTCTTACATTGAGCAACATGGAACTGGTGGGAACTGGATTGCTTTGCCTCAAAAAATTGGTAAAAATTCAATCTTTTTCATCTTGTTCTTCTTGTTTTGATCCAATTTCTTCTGGGGTTTCTGTTTTTTGGAGTTAAAATTTGGCCCTTTAAACGAAATTAGGCCTAAAGAGATGTGGAAAAAGTTGTCGATTGAGATGGCTGAATTATCTCCGTCCGAACATCAAGCATGGAGGTTTCTCCGAAGAAGAAGATAGAATCATTTGTAGTCTCTATCTTACTATTGGAAGCAGGTAATTTTTTTTTCTTCAATCAAATCCCGAATCCCAAATCGTTTCATTTTAATTAGGGTTTGAGGTTCGATAAAAAAAAAAAAAATCAATTCTAAGGGTTTGGTATGGAATAGGTGGTCTATAATTGCAGCACAGTTACCAGGAAGAACAGATAACGACATAAAGAACTACTGGAACACGAGGTTGAAGAAGAAGCTATTTGGGAAGCAAAGGAAAGATCATCATCAACAACAACAACAACAACAGGCAACTCGTCGAGGAAACGCCCTAAGGCATCACGGGACGGTGAATAAAAGCAATAGCGCCATTCCTTATTGGCCTCAGCAGCAGCAGCTCCCAGTGGCACCAAGCTACTATAACAACATGCTATCATCTGACCATATCAACCCAATTGAGAATTTGAGCAAATTTGGAGCTCAATTTATGGAACAAAGTGTGTACAACAACAACAATGCAAATGGGTATTATTTTCCATTGCTTCAAGGGCAAAGCAGCAGCCAAATGGTGGATCTTGAGAATTATGACATGGGGTTTGATGATCCAAGAAGGGTTTTGTGTGGATTTGAGTTTCTGTATGGAGATCATCATAATCAAATAATGGGTACTAGTAATAGCCATGGCTATGAAATGGGGCCTCTGATTTCTTCTTGCCCTTCAAATTACGAAGCAATGCTGCAAGATTTGTCAACCACGACTCAAGAATATGATACTCACTTGAAGATAATGGATAGCAATGCAGTATGA

mRNA sequence

ATGGGGAGAGCTCCTTGCTGTGACAAAGCCAATGTCAAGAAAGGCCCATGGTCTGCTGAAGAAGACACCAAGCTCAAGTCTTACATTGAGCAACATGGAACTGGTGGGAACTGGATTGCTTTGCCTCAAAAAATTGGCCTAAAGAGATGTGGAAAAAGTTGTCGATTGAGATGGCTGAATTATCTCCGTCCGAACATCAAGCATGGAGGTTTCTCCGAAGAAGAAGATAGAATCATTTGTAGTCTCTATCTTACTATTGGAAGCAGGTGGTCTATAATTGCAGCACAGTTACCAGGAAGAACAGATAACGACATAAAGAACTACTGGAACACGAGGTTGAAGAAGAAGCTATTTGGGAAGCAAAGGAAAGATCATCATCAACAACAACAACAACAACAGGCAACTCGTCGAGGAAACGCCCTAAGGCATCACGGGACGGTGAATAAAAGCAATAGCGCCATTCCTTATTGGCCTCAGCAGCAGCAGCTCCCAGTGGCACCAAGCTACTATAACAACATGCTATCATCTGACCATATCAACCCAATTGAGAATTTGAGCAAATTTGGAGCTCAATTTATGGAACAAAGTGTGTACAACAACAACAATGCAAATGGGTATTATTTTCCATTGCTTCAAGGGCAAAGCAGCAGCCAAATGGTGGATCTTGAGAATTATGACATGGGGTTTGATGATCCAAGAAGGGTTTTGTGTGGATTTGAGTTTCTGTATGGAGATCATCATAATCAAATAATGGGTACTAGTAATAGCCATGGCTATGAAATGGGGCCTCTGATTTCTTCTTGCCCTTCAAATTACGAAGCAATGCTGCAAGATTTGTCAACCACGACTCAAGAATATGATACTCACTTGAAGATAATGGATAGCAATGCAGTATGA

Coding sequence (CDS)

ATGGGGAGAGCTCCTTGCTGTGACAAAGCCAATGTCAAGAAAGGCCCATGGTCTGCTGAAGAAGACACCAAGCTCAAGTCTTACATTGAGCAACATGGAACTGGTGGGAACTGGATTGCTTTGCCTCAAAAAATTGGCCTAAAGAGATGTGGAAAAAGTTGTCGATTGAGATGGCTGAATTATCTCCGTCCGAACATCAAGCATGGAGGTTTCTCCGAAGAAGAAGATAGAATCATTTGTAGTCTCTATCTTACTATTGGAAGCAGGTGGTCTATAATTGCAGCACAGTTACCAGGAAGAACAGATAACGACATAAAGAACTACTGGAACACGAGGTTGAAGAAGAAGCTATTTGGGAAGCAAAGGAAAGATCATCATCAACAACAACAACAACAACAGGCAACTCGTCGAGGAAACGCCCTAAGGCATCACGGGACGGTGAATAAAAGCAATAGCGCCATTCCTTATTGGCCTCAGCAGCAGCAGCTCCCAGTGGCACCAAGCTACTATAACAACATGCTATCATCTGACCATATCAACCCAATTGAGAATTTGAGCAAATTTGGAGCTCAATTTATGGAACAAAGTGTGTACAACAACAACAATGCAAATGGGTATTATTTTCCATTGCTTCAAGGGCAAAGCAGCAGCCAAATGGTGGATCTTGAGAATTATGACATGGGGTTTGATGATCCAAGAAGGGTTTTGTGTGGATTTGAGTTTCTGTATGGAGATCATCATAATCAAATAATGGGTACTAGTAATAGCCATGGCTATGAAATGGGGCCTCTGATTTCTTCTTGCCCTTCAAATTACGAAGCAATGCTGCAAGATTTGTCAACCACGACTCAAGAATATGATACTCACTTGAAGATAATGGATAGCAATGCAGTATGA

Protein sequence

MGRAPCCDKANVKKGPWSAEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKDHHQQQQQQQATRRGNALRHHGTVNKSNSAIPYWPQQQQLPVAPSYYNNMLSSDHINPIENLSKFGAQFMEQSVYNNNNANGYYFPLLQGQSSSQMVDLENYDMGFDDPRRVLCGFEFLYGDHHNQIMGTSNSHGYEMGPLISSCPSNYEAMLQDLSTTTQEYDTHLKIMDSNAV

Homology

[Close]

BLAST of Carg16374 vs. NCBI nr
Match: KAG7020626.1 (Transcription factor RAX3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 628.6 bits (1620), Expect = 2.7e-176
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSAEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDKANVKKGPWSAEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSAEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPNIKHGGFSEEEDRIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK
Sbjct: 61  YLRPNIKHGGFSEEEDRIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120

Query: 121 QRKDHHQQQQQQQATRRGNALRHHGTVNKSNSAIPYWPQQQQLPVAPSYYNNMLSSDHIN 180
           QRKDHHQQQQQQQATRRGNALRHHGTVNKSNSAIPYWPQQQQLPVAPSYYNNMLSSDHIN
Sbjct: 121 QRKDHHQQQQQQQATRRGNALRHHGTVNKSNSAIPYWPQQQQLPVAPSYYNNMLSSDHIN 180

Query: 181 PIENLSKFGAQFMEQSVYNNNNANGYYFPLLQGQSSSQMVDLENYDMGFDDPRRVLCGFE 240
           PIENLSKFGAQFMEQSVYNNNNANGYYFPLLQGQSSSQMVDLENYDMGFDDPRRVLCGFE
Sbjct: 181 PIENLSKFGAQFMEQSVYNNNNANGYYFPLLQGQSSSQMVDLENYDMGFDDPRRVLCGFE 240

Query: 241 FLYGDHHNQIMGTSNSHGYEMGPLISSCPSNYEAMLQDLSTTTQEYDTHLKIMDSNAV 299
           FLYGDHHNQIMGTSNSHGYEMGPLISSCPSNYEAMLQDLSTTTQEYDTHLKIMDSNAV
Sbjct: 241 FLYGDHHNQIMGTSNSHGYEMGPLISSCPSNYEAMLQDLSTTTQEYDTHLKIMDSNAV 298

[Close]

BLAST of Carg16374 vs. NCBI nr
Match: XP_022951765.1 (transcription factor RAX3-like [Cucurbita moschata])

HSP 1 Score: 611.7 bits (1576), Expect = 3.4e-171
Identity = 294/302 (97.35%), Postives = 295/302 (97.68%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSAEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDKANVKKGPWSAEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSAEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPNIKHGGFSEEEDRIICSLYL+IGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK
Sbjct: 61  YLRPNIKHGGFSEEEDRIICSLYLSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120

Query: 121 QRKDHHQQQQQQQATRRGNALRHHGTVNKSNSAIPYWPQQQQLPVAPSYYNNMLSSDHIN 180
           QRKDHH  QQQQQATRRGNALRHHGTVNKSNSAIPYWPQQQQ PVAPSYYNNMLSSDHIN
Sbjct: 121 QRKDHH--QQQQQATRRGNALRHHGTVNKSNSAIPYWPQQQQFPVAPSYYNNMLSSDHIN 180

Query: 181 PIENLSKFGAQFMEQSVYNNNNA----NGYYFPLLQGQSSSQMVDLENYDMGFDDPRRVL 240
           PIENLSKFGAQFMEQSVYNNNNA    NGYYFPLLQGQSSSQMVDLENYDMGFDDPRRVL
Sbjct: 181 PIENLSKFGAQFMEQSVYNNNNANGYGNGYYFPLLQGQSSSQMVDLENYDMGFDDPRRVL 240

Query: 241 CGFEFLYGDHHNQIMGTSNSHGYEMGPLISSCPSNYEAMLQDLSTTTQEYDTHLKIMDSN 299
           CGFEFLYGDHHNQIMGTSNSHGYEMGPLISSCPSNYEAMLQDLSTTTQEYDTHLKIMDSN
Sbjct: 241 CGFEFLYGDHHNQIMGTSNSHGYEMGPLISSCPSNYEAMLQDLSTTTQEYDTHLKIMDSN 300

[Close]

BLAST of Carg16374 vs. NCBI nr
Match: KAG6585725.1 (Transcription factor RAX3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 608.6 bits (1568), Expect = 2.9e-170
Identity = 293/302 (97.02%), Postives = 294/302 (97.35%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSAEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDKANVKKGPWSAEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSAEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPNIKHGGFSEEEDRIICSLYL+IGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK
Sbjct: 61  YLRPNIKHGGFSEEEDRIICSLYLSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120

Query: 121 QRKDHHQQQQQQQATRRGNALRHHGTVNKSNSAIPYWPQQQQLPVAPSYYNNMLSSDHIN 180
           QRKDHH   QQQQATRRGNALRHHGTVNKSNSAIPYWPQQQQLPVAPSYYNNMLSSDHIN
Sbjct: 121 QRKDHH--HQQQQATRRGNALRHHGTVNKSNSAIPYWPQQQQLPVAPSYYNNMLSSDHIN 180

Query: 181 PIENLSKFGAQFMEQSVYNNNNA----NGYYFPLLQGQSSSQMVDLENYDMGFDDPRRVL 240
           PIENLSKFGAQFMEQSVYNNNNA    NGYYFPLLQGQSSSQMVDLENYDMGFDDPRRVL
Sbjct: 181 PIENLSKFGAQFMEQSVYNNNNANGYGNGYYFPLLQGQSSSQMVDLENYDMGFDDPRRVL 240

Query: 241 CGFEFLYGDHHNQIMGTSNSHGYEMGPLISSCPSNYEAMLQDLSTTTQEYDTHLKIMDSN 299
           CGFEFLYGDHHNQIMGTSNSHGYEMGPLISSCPSNYEAMLQ LSTTTQEYDTHLKIMDSN
Sbjct: 241 CGFEFLYGDHHNQIMGTSNSHGYEMGPLISSCPSNYEAMLQGLSTTTQEYDTHLKIMDSN 300

[Close]

BLAST of Carg16374 vs. NCBI nr
Match: XP_023538436.1 (transcription factor RAX3-like [Cucurbita pepo subsp. pepo] >XP_023538441.1 transcription factor RAX3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 600.5 bits (1547), Expect = 7.8e-168
Identity = 287/302 (95.03%), Postives = 294/302 (97.35%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSAEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDKANVKKGPWSAEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSAEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPNIKHGGFSEEED+IICSLYL+IGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK
Sbjct: 61  YLRPNIKHGGFSEEEDKIICSLYLSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120

Query: 121 QRKDHHQQQQQQQATRRGNALRHHGTVNKSNSAIPYWPQQQQLPVAPSYYNNMLSSDHIN 180
           QRK+ HQQQQQQQATRRGNALRHHGT+N+SNSAIPYWPQQQQLPVAPSYYNNM SSDHIN
Sbjct: 121 QRKE-HQQQQQQQATRRGNALRHHGTMNRSNSAIPYWPQQQQLPVAPSYYNNMPSSDHIN 180

Query: 181 PIENLSKFGAQFMEQSVYNNNN----ANGYYFPLLQGQSSSQMVDLENYDMGFDDPRRVL 240
           PIENLSKFGAQFMEQSVYNNNN     NGYYFPLLQGQSSSQMVDLENYDMGFDDPRRVL
Sbjct: 181 PIENLSKFGAQFMEQSVYNNNNVNGYGNGYYFPLLQGQSSSQMVDLENYDMGFDDPRRVL 240

Query: 241 CGFEFLYGDHHNQIMGTSNSHGYEMGPLISSCPSNYEAMLQDLSTTTQEYDTHLKIMDSN 299
           CGFEF+YGDHHNQ+MGTSNSHGYEMGPLISSCPSNYEAMLQDLST TQEYDTHLKIMDSN
Sbjct: 241 CGFEFVYGDHHNQLMGTSNSHGYEMGPLISSCPSNYEAMLQDLSTMTQEYDTHLKIMDSN 300

[Close]

BLAST of Carg16374 vs. NCBI nr
Match: XP_023521101.1 (transcription factor RAX3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 590.5 bits (1521), Expect = 8.1e-165
Identity = 288/331 (87.01%), Postives = 294/331 (88.82%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSAEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDKANVKKGPWSAEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSAEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPNIKHGGFSEEED+IICSLYL+IGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK
Sbjct: 61  YLRPNIKHGGFSEEEDKIICSLYLSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120

Query: 121 QRKDHHQQQQQQ-----------------------------QATRRGNALRHHGTVNKSN 180
           QRK+H QQQQQQ                             QATRRGNALRHHGT+NKSN
Sbjct: 121 QRKEHQQQQQQQATRRGNALRHHGTMNRSNSWHQATITTCXQATRRGNALRHHGTMNKSN 180

Query: 181 SAIPYWPQQQQLPVAPSYYNNMLSSDHINPIENLSKFGAQFMEQSVYNNNN----ANGYY 240
           SAIPYWPQQQQLPVAPSYYNNM SSDHINPIENLSKFGAQFMEQSVYNNNN     NGYY
Sbjct: 181 SAIPYWPQQQQLPVAPSYYNNMPSSDHINPIENLSKFGAQFMEQSVYNNNNVNGYGNGYY 240

Query: 241 FPLLQGQSSSQMVDLENYDMGFDDPRRVLCGFEFLYGDHHNQIMGTSNSHGYEMGPLISS 299
           FPLLQGQSSSQMVDLENYDMGFDDPRRVLCGFEF+YGDHHNQ+MGTSNSHGYEMGPLISS
Sbjct: 241 FPLLQGQSSSQMVDLENYDMGFDDPRRVLCGFEFVYGDHHNQLMGTSNSHGYEMGPLISS 300

[Close]

BLAST of Carg16374 vs. ExPASy Swiss-Prot
Match: Q9M2Y9 (Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 6.9e-66
Identity = 129/208 (62.02%), Postives = 148/208 (71.15%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSAEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDKANVKKGPWS EED KLKSYIE  GTGGNWIALPQKIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPNIKHGGFSEEE+ IICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKL  K
Sbjct: 61  YLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLINK 120

Query: 121 QRKDHHQQQQQQQATRRGNALRHH------GTVNKSNSAIPYWPQQQQLPVAPSYYNNML 180
           QRK+  +   +QQ        +H         + + +  +  WP        P+ + N  
Sbjct: 121 QRKELQEACMEQQEMMVMMKRQHQQQQIQTSFMMRQDQTMFTWPLHHHNVQVPALFMNQT 180

Query: 181 SS----DHINP--IENLSKFGAQFMEQS 197
           +S    + + P  I+N+ K   Q +E++
Sbjct: 181 NSFCDQEDVKPVLIKNMVKIEDQELEKT 208

[Close]

BLAST of Carg16374 vs. ExPASy Swiss-Prot
Match: Q9FKL2 (Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.7e-64
Identity = 123/187 (65.78%), Postives = 140/187 (74.87%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSAEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDKANVKKGPWS EED KLK YI+++GTGGNWIALPQKIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPNIKHGGFSEEEDRII SLY++IGSRWSIIAAQLPGRTDNDIKNYWNT+LKKKL G+
Sbjct: 61  YLRPNIKHGGFSEEEDRIILSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGR 120

Query: 121 QRKDHHQQQ-QQQQATRRGNALRHHGTVNKSNSAIPYWPQQQQL----PVAPSYYNNMLS 180
           Q++ + Q            N   +    N SNSA+       QL        S+YNN + 
Sbjct: 121 QKQMNRQDSITDSTENNLSNNNNNKSPQNLSNSALERLQLHMQLQNLQSPFSSFYNNPIL 180

Query: 181 SDHINPI 183
              ++P+
Sbjct: 181 WPKLHPL 187

[Close]

BLAST of Carg16374 vs. ExPASy Swiss-Prot
Match: F4JSU0 (Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 2.1e-62
Identity = 107/128 (83.59%), Postives = 116/128 (90.62%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSAEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDK  VKKGPWS EED  LKSYIE+HGTG NWI+LPQ+IG+KRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKMAVKKGPWSTEEDAVLKSYIEKHGTGNNWISLPQRIGIKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPN+KHGGF++EED IICSLY+TIGSRWSIIA+QLPGRTDNDIKNYWNTRLKKKL  K
Sbjct: 61  YLRPNLKHGGFTDEEDYIICSLYITIGSRWSIIASQLPGRTDNDIKNYWNTRLKKKLLSK 120

Query: 121 QRKDHHQQ 129
           Q K  HQQ
Sbjct: 121 QGKAFHQQ 128

[Close]

BLAST of Carg16374 vs. ExPASy Swiss-Prot
Match: Q9SJL7 (Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 9.9e-57
Identity = 107/165 (64.85%), Postives = 122/165 (73.94%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSAEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDKANVK+GPWS EED KLK YIE+ GTGGNWIALP K GL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPNI+HG F+EEED II SL+ +IGSRWS+IAA L GRTDNDIKNYWNT+LKKKL   
Sbjct: 61  YLRPNIRHGDFTEEEDNIIYSLFASIGSRWSVIAAHLQGRTDNDIKNYWNTKLKKKLIAT 120

Query: 121 QR--KDHHQQQQQQQATRRGNALRHHGTVNKSNSAIPYWPQQQQL 164
                 HH       ++   ++  H+   N  NS +PY P   QL
Sbjct: 121 MAPPPHHHLAIATSSSSASPSSSSHY---NMINSLLPYNPSTNQL 162

[Close]

BLAST of Carg16374 vs. ExPASy Swiss-Prot
Match: Q9FG68 (Transcription factor RAX1 OS=Arabidopsis thaliana OX=3702 GN=RAX1 PE=1 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 2.3e-53
Identity = 114/215 (53.02%), Postives = 134/215 (62.33%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSAEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDK  VK+GPWS EED+KL+ YIE++G GGNWI+ P K GL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKTKVKRGPWSPEEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPNIKHG FSEEEDRII SL+  IGSRWSIIAA LPGRTDNDIKNYWNT+L+KKL   
Sbjct: 61  YLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLPGRTDNDIKNYWNTKLRKKLLSS 120

Query: 121 QRKDHHQQQQQQQATRRGNALRH--HGTVNKSNSAIPYWPQQQQLPVAP--SYYNNMLSS 180
                               ++     T   S+S  PY     Q P     S  N   + 
Sbjct: 121 SSDSSSSAMASPYLNPISQDVKRPTSPTTIPSSSYNPYAENPNQYPTKSLISSINGFEAG 180

Query: 181 D-----HINPIENLSKFGAQFMEQSVYNNNNANGY 207
           D     +INP  N  +    ++  S  N +NANG+
Sbjct: 181 DKQIISYINP--NYPQ--DLYLSDSNNNTSNANGF 211

[Close]

BLAST of Carg16374 vs. ExPASy TrEMBL
Match: A0A6J1GJT2 (transcription factor RAX3-like OS=Cucurbita moschata OX=3662 GN=LOC111454503 PE=4 SV=1)

HSP 1 Score: 611.7 bits (1576), Expect = 1.6e-171
Identity = 294/302 (97.35%), Postives = 295/302 (97.68%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSAEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDKANVKKGPWSAEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSAEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPNIKHGGFSEEEDRIICSLYL+IGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK
Sbjct: 61  YLRPNIKHGGFSEEEDRIICSLYLSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120

Query: 121 QRKDHHQQQQQQQATRRGNALRHHGTVNKSNSAIPYWPQQQQLPVAPSYYNNMLSSDHIN 180
           QRKDHH  QQQQQATRRGNALRHHGTVNKSNSAIPYWPQQQQ PVAPSYYNNMLSSDHIN
Sbjct: 121 QRKDHH--QQQQQATRRGNALRHHGTVNKSNSAIPYWPQQQQFPVAPSYYNNMLSSDHIN 180

Query: 181 PIENLSKFGAQFMEQSVYNNNNA----NGYYFPLLQGQSSSQMVDLENYDMGFDDPRRVL 240
           PIENLSKFGAQFMEQSVYNNNNA    NGYYFPLLQGQSSSQMVDLENYDMGFDDPRRVL
Sbjct: 181 PIENLSKFGAQFMEQSVYNNNNANGYGNGYYFPLLQGQSSSQMVDLENYDMGFDDPRRVL 240

Query: 241 CGFEFLYGDHHNQIMGTSNSHGYEMGPLISSCPSNYEAMLQDLSTTTQEYDTHLKIMDSN 299
           CGFEFLYGDHHNQIMGTSNSHGYEMGPLISSCPSNYEAMLQDLSTTTQEYDTHLKIMDSN
Sbjct: 241 CGFEFLYGDHHNQIMGTSNSHGYEMGPLISSCPSNYEAMLQDLSTTTQEYDTHLKIMDSN 300

[Close]

BLAST of Carg16374 vs. ExPASy TrEMBL
Match: A0A6J1KQX4 (transcription factor RAX3-like OS=Cucurbita maxima OX=3661 GN=LOC111496413 PE=4 SV=1)

HSP 1 Score: 573.9 bits (1478), Expect = 3.8e-160
Identity = 279/305 (91.48%), Postives = 288/305 (94.43%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSAEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDKA+VKKGPWS EEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKASVKKGPWSTEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPNIKHGGFSEEEDRIICSLYL+IGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK
Sbjct: 61  YLRPNIKHGGFSEEEDRIICSLYLSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120

Query: 121 QRKDHHQQQQQQQATRRGNALRHHGTVNKSNSAIPYWP-QQQQLPVAPSYY---NNMLSS 180
           QRK   +QQQQQQA+RRGNALRHHGTVNKSNS IPYWP QQQQLPVAPSYY   NNM SS
Sbjct: 121 QRK---EQQQQQQASRRGNALRHHGTVNKSNSTIPYWPQQQQQLPVAPSYYNNNNNMASS 180

Query: 181 DHINPIENLSKFGAQFMEQSVYNNN---NANGYYFPLLQGQSSSQMVDLENYDMGFDDPR 240
           DHINPIE LSKFGAQFM++SVYNNN     N YYFPLLQGQSS+QMVDLENYDMGFDDPR
Sbjct: 181 DHINPIEKLSKFGAQFMDESVYNNNANGYGNAYYFPLLQGQSSTQMVDLENYDMGFDDPR 240

Query: 241 RVLCGFEFLYGDHHNQIMGTSNSHGYEMGPLISSCPSNYEAMLQDLSTTTQEYDTHLKIM 299
           RVLCGFEF+YGDHHNQIMGTSNSHGYEMGPLISSCPSNYEAMLQDLSTTTQEYDTHLKI+
Sbjct: 241 RVLCGFEFVYGDHHNQIMGTSNSHGYEMGPLISSCPSNYEAMLQDLSTTTQEYDTHLKIL 300

[Close]

BLAST of Carg16374 vs. ExPASy TrEMBL
Match: A0A6J1K654 (transcription factor RAX3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111492028 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 8.3e-115
Identity = 224/322 (69.57%), Postives = 256/322 (79.50%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSAEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDKANVKKGPWS EED KLKSYIE+HGTGGNWIALPQKIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPNIKHGGFSEEEDRIICSLY++IGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK
Sbjct: 61  YLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120

Query: 121 QRKDHHQQQQQQQATRRGNALR----------------HHG---------TVNKSNSAIP 180
           QRK+HH    QQQATRRGNAL+                ++G         ++N++++ IP
Sbjct: 121 QRKEHH---HQQQATRRGNALKQMQQMKRPSETNNNTTNYGAENNNIAIFSLNEAHNNIP 180

Query: 181 YWPQQQQLPVAPSYYNNML-SSDHINPIENLSKFGAQFM-EQSVYN--NNNANGY--YFP 240
           YWPQQQQLP+AP Y    L +SD INPIENLSKFG Q M E+S Y+  NNNANGY  + P
Sbjct: 181 YWPQQQQLPLAPHYNQGSLPASDPINPIENLSKFGGQSMGEESGYSNMNNNANGYGHFLP 240

Query: 241 LLQGQSSSQM--VDLENYDM-GFDDPRRVLCGFEFLYGDHHNQIMGTSNSHGYEMGPL-I 288
           ++QGQSS+QM  V++ENY+M G++DPRRVLCG EFL+ DHH QI+GT N HG EMG L  
Sbjct: 241 IMQGQSSNQMVEVEVENYNMTGYEDPRRVLCGLEFLFEDHH-QILGT-NGHGCEMGSLQS 300

[Close]

BLAST of Carg16374 vs. ExPASy TrEMBL
Match: A0A6J1HEB2 (transcription factor RAX3-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111462761 PE=4 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 5.4e-114
Identity = 222/322 (68.94%), Postives = 255/322 (79.19%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSAEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDKANVKKGPWS EED KLKSYIE+HGTGGNWIALPQKIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPNIKHGGFSEEEDRIICSLY++IGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK
Sbjct: 61  YLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120

Query: 121 QRKDHHQQQQQQQATRRGNALR----------------HHG---------TVNKSNSAIP 180
           QRK+HH    QQQATRRGNAL+                ++G         ++N++++ IP
Sbjct: 121 QRKEHH---HQQQATRRGNALKQMQQMKRPLENNNNATNYGAENNNIAIFSLNEAHNNIP 180

Query: 181 YWPQQQQLPVAPSYYNNML-SSDHINPIENLSKFGAQFM-EQSVYN--NNNANGY--YFP 240
           YWPQQQQLP+ P Y    L +SD INPIENLSKFG Q M E+S Y+  NNNANGY  + P
Sbjct: 181 YWPQQQQLPLGPHYNQGSLPASDPINPIENLSKFGGQSMGEESGYSNMNNNANGYGHFLP 240

Query: 241 LLQGQSSSQM--VDLENYDM-GFDDPRRVLCGFEFLYGDHHNQIMGTSNSHGYEMGPL-I 288
           ++QGQSS+QM  V++ENY+M G++DPRRVLCG EFL+ DHH QI+GT N HG +MG L  
Sbjct: 241 IMQGQSSNQMVEVEVENYNMTGYEDPRRVLCGLEFLFEDHH-QILGT-NGHGCDMGSLQS 300

[Close]

BLAST of Carg16374 vs. ExPASy TrEMBL
Match: A0A6J1K871 (transcription factor RAX3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492028 PE=4 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 2.0e-113
Identity = 224/323 (69.35%), Postives = 256/323 (79.26%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSAEEDTKLKSYIEQHGTGGNWIALPQKI-GLKRCGKSCRLRWL 60
           MGRAPCCDKANVKKGPWS EED KLKSYIE+HGTGGNWIALPQKI GLKRCGKSCRLRWL
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKIVGLKRCGKSCRLRWL 60

Query: 61  NYLRPNIKHGGFSEEEDRIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFG 120
           NYLRPNIKHGGFSEEEDRIICSLY++IGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFG
Sbjct: 61  NYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFG 120

Query: 121 KQRKDHHQQQQQQQATRRGNALR----------------HHG---------TVNKSNSAI 180
           KQRK+HH    QQQATRRGNAL+                ++G         ++N++++ I
Sbjct: 121 KQRKEHH---HQQQATRRGNALKQMQQMKRPSETNNNTTNYGAENNNIAIFSLNEAHNNI 180

Query: 181 PYWPQQQQLPVAPSYYNNML-SSDHINPIENLSKFGAQFM-EQSVYN--NNNANGY--YF 240
           PYWPQQQQLP+AP Y    L +SD INPIENLSKFG Q M E+S Y+  NNNANGY  + 
Sbjct: 181 PYWPQQQQLPLAPHYNQGSLPASDPINPIENLSKFGGQSMGEESGYSNMNNNANGYGHFL 240

Query: 241 PLLQGQSSSQM--VDLENYDM-GFDDPRRVLCGFEFLYGDHHNQIMGTSNSHGYEMGPL- 288
           P++QGQSS+QM  V++ENY+M G++DPRRVLCG EFL+ DHH QI+GT N HG EMG L 
Sbjct: 241 PIMQGQSSNQMVEVEVENYNMTGYEDPRRVLCGLEFLFEDHH-QILGT-NGHGCEMGSLQ 300

[Close]

BLAST of Carg16374 vs. TAIR 10
Match: AT3G49690.1 (myb domain protein 84 )

HSP 1 Score: 252.3 bits (643), Expect = 4.9e-67
Identity = 129/208 (62.02%), Postives = 148/208 (71.15%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSAEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDKANVKKGPWS EED KLKSYIE  GTGGNWIALPQKIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPNIKHGGFSEEE+ IICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKL  K
Sbjct: 61  YLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLINK 120

Query: 121 QRKDHHQQQQQQQATRRGNALRHH------GTVNKSNSAIPYWPQQQQLPVAPSYYNNML 180
           QRK+  +   +QQ        +H         + + +  +  WP        P+ + N  
Sbjct: 121 QRKELQEACMEQQEMMVMMKRQHQQQQIQTSFMMRQDQTMFTWPLHHHNVQVPALFMNQT 180

Query: 181 SS----DHINP--IENLSKFGAQFMEQS 197
           +S    + + P  I+N+ K   Q +E++
Sbjct: 181 NSFCDQEDVKPVLIKNMVKIEDQELEKT 208

[Close]

BLAST of Carg16374 vs. TAIR 10
Match: AT5G65790.1 (myb domain protein 68 )

HSP 1 Score: 251.1 bits (640), Expect = 1.1e-66
Identity = 121/173 (69.94%), Postives = 131/173 (75.72%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSAEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDKANVKKGPWS EED KLK YIE  GTGGNWIALPQKIGL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKDYIENSGTGGNWIALPQKIGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPNIKHGGFSEEED IIC+LY+TIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKL  K
Sbjct: 61  YLRPNIKHGGFSEEEDNIICNLYVTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLNK 120

Query: 121 QRKDHHQQQQQQQATRRGNALRHHGTVNKSNSAIPY---------WPQQQQLP 165
           QRK+  + + +Q+        +  G    + S   Y         WP   QLP
Sbjct: 121 QRKEFQEARMKQEMVMMKRQQQGQGQGQSNGSTDLYLNNMFGSSPWPLLPQLP 173

[Close]

BLAST of Carg16374 vs. TAIR 10
Match: AT5G57620.1 (myb domain protein 36 )

HSP 1 Score: 247.7 bits (631), Expect = 1.2e-65
Identity = 123/187 (65.78%), Postives = 140/187 (74.87%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSAEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDKANVKKGPWS EED KLK YI+++GTGGNWIALPQKIGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPNIKHGGFSEEEDRII SLY++IGSRWSIIAAQLPGRTDNDIKNYWNT+LKKKL G+
Sbjct: 61  YLRPNIKHGGFSEEEDRIILSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGR 120

Query: 121 QRKDHHQQQ-QQQQATRRGNALRHHGTVNKSNSAIPYWPQQQQL----PVAPSYYNNMLS 180
           Q++ + Q            N   +    N SNSA+       QL        S+YNN + 
Sbjct: 121 QKQMNRQDSITDSTENNLSNNNNNKSPQNLSNSALERLQLHMQLQNLQSPFSSFYNNPIL 180

Query: 181 SDHINPI 183
              ++P+
Sbjct: 181 WPKLHPL 187

[Close]

BLAST of Carg16374 vs. TAIR 10
Match: AT4G37780.1 (myb domain protein 87 )

HSP 1 Score: 240.7 bits (613), Expect = 1.5e-63
Identity = 107/128 (83.59%), Postives = 116/128 (90.62%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSAEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDK  VKKGPWS EED  LKSYIE+HGTG NWI+LPQ+IG+KRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKMAVKKGPWSTEEDAVLKSYIEKHGTGNNWISLPQRIGIKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPN+KHGGF++EED IICSLY+TIGSRWSIIA+QLPGRTDNDIKNYWNTRLKKKL  K
Sbjct: 61  YLRPNLKHGGFTDEEDYIICSLYITIGSRWSIIASQLPGRTDNDIKNYWNTRLKKKLLSK 120

Query: 121 QRKDHHQQ 129
           Q K  HQQ
Sbjct: 121 QGKAFHQQ 128

[Close]

BLAST of Carg16374 vs. TAIR 10
Match: AT2G36890.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 221.9 bits (564), Expect = 7.1e-58
Identity = 107/165 (64.85%), Postives = 122/165 (73.94%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSAEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
           MGRAPCCDKANVK+GPWS EED KLK YIE+ GTGGNWIALP K GL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFSEEEDRIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK 120
           YLRPNI+HG F+EEED II SL+ +IGSRWS+IAA L GRTDNDIKNYWNT+LKKKL   
Sbjct: 61  YLRPNIRHGDFTEEEDNIIYSLFASIGSRWSVIAAHLQGRTDNDIKNYWNTKLKKKLIAT 120

Query: 121 QR--KDHHQQQQQQQATRRGNALRHHGTVNKSNSAIPYWPQQQQL 164
                 HH       ++   ++  H+   N  NS +PY P   QL
Sbjct: 121 MAPPPHHHLAIATSSSSASPSSSSHY---NMINSLLPYNPSTNQL 162

The following BLAST results are available for this feature:

BLAST of Carg16374 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7020626.1	2.7e-176	100.00	Transcription factor RAX3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022951765.1	3.4e-171	97.35	transcription factor RAX3-like [Cucurbita moschata]	[more]
KAG6585725.1	2.9e-170	97.02	Transcription factor RAX3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023538436.1	7.8e-168	95.03	transcription factor RAX3-like [Cucurbita pepo subsp. pepo] >XP_023538441.1 tran...	[more]
XP_023521101.1	8.1e-165	87.01	transcription factor RAX3-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg16374 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2Y9	6.9e-66	62.02	Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1	[more]
Q9FKL2	1.7e-64	65.78	Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1	[more]
F4JSU0	2.1e-62	83.59	Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1	[more]
Q9SJL7	9.9e-57	64.85	Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1	[more]
Q9FG68	2.3e-53	53.02	Transcription factor RAX1 OS=Arabidopsis thaliana OX=3702 GN=RAX1 PE=1 SV=1	[more]

BLAST of Carg16374 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GJT2	1.6e-171	97.35	transcription factor RAX3-like OS=Cucurbita moschata OX=3662 GN=LOC111454503 PE=...	[more]
A0A6J1KQX4	3.8e-160	91.48	transcription factor RAX3-like OS=Cucurbita maxima OX=3661 GN=LOC111496413 PE=4 ...	[more]
A0A6J1K654	8.3e-115	69.57	transcription factor RAX3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1HEB2	5.4e-114	68.94	transcription factor RAX3-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1K871	2.0e-113	69.35	transcription factor RAX3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of Carg16374 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49690.1	4.9e-67	62.02	myb domain protein 84	[more]
AT5G65790.1	1.1e-66	69.94	myb domain protein 68	[more]
AT5G57620.1	1.2e-65	65.78	myb domain protein 36	[more]
AT4G37780.1	1.5e-63	83.59	myb domain protein 87	[more]
AT2G36890.1	7.1e-58	64.85	Duplicated homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 67..115 e-value: 5.8E-11 score: 52.4 coord: 13..64 e-value: 1.5E-12 score: 57.7
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 9..62 score: 11.253823
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 63..113 score: 9.430676
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 71..113 e-value: 3.73796E-8 score: 46.7998
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 16..62 e-value: 7.60155E-10 score: 51.8074
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 14..62 e-value: 4.2E-14 score: 52.5 coord: 69..111 e-value: 1.4E-9 score: 38.0
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 63..117 score: 21.052008
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 9..62 score: 15.517502
None	No IPR available	GENE3D	1.10.10.60		coord: 7..68 e-value: 1.3E-18 score: 68.6
None	No IPR available	GENE3D	1.10.10.60		coord: 70..143 e-value: 2.7E-21 score: 77.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..140
None	No IPR available	PANTHER	PTHR48000:SF36	OS09G0431300 PROTEIN	coord: 1..195
None	No IPR available	PANTHER	PTHR48000	OS09G0431300 PROTEIN	coord: 1..195
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 11..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16374-RA	Carg16374-RA	mRNA