Carg16350 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg16350
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionzinc finger protein 4-like
LocationCarg_Chr19: 6077023 .. 6083575 (-)
RNA-Seq ExpressionCarg16350
SyntenyCarg16350
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TATATATAAGGAGTGCAAACCATCTACAAATAATCTAACGGTCAACAATTGAGGGCACAGGATAACTATCGTACGCCGGCAGCACAATATCTCGAAAGAGAATTTCTGAATGCCGCGAAACTAAAACCGACGTGAAGTCCCAACACCGTTAGCATCCTCAAAACAGTCACAGCGTAGAATCTGAGAAGACGATGGCTTGGCCTTTCTCCGACGCTAATGTCCACCGCCCGCTCTTCATCTTCCCGGTTAACTTCATCGGCTCTTCAACTCCTGCCGCCGCCGGTCTCTGCTCCTCGGCGCCTGCCGGCCCGCTAATTCTCTGCGGCTTCCAGGTTCCCTTCGCCAAAACCCGCTATCATTGCTTCTTTGTGTTGCTTAACTGAAAACGCTATCCACGAATGTTTTCACTTAGCGCCTGGTTGTTCCGTTACCTTTTTTCATGGTTTATTGATACTTAACTGGCTGAGAATTATTTTTGCAGATTTGGAATCTTGAGAATTTTTTCTTTTGTTTTTTAGTTTAATTAGCTGATAAAAAATTGGAGAGAATAATCAGAGCAAAGATGTATTCGATATACGGATGGTTCTTGTTTATAGATTTGTTGGCCTTCCATTTCATAATTTAACGCTTGTTTTTTTGCGGTTACTTGTAGAAAGTAGATGAAAAAGGAAGTGGACCACTTCTACTCTCTTTTCCTGCATCATGACCCCGGAATATATTATTGACTGGAACTGTTTGCATATGATATGAGGAAATTGGCGTCAGAATCTCAAACGTGGAAAGTTATTTTACTGCAAAATTGTAAGTGTGTGCCTTCCTTAAACTTAGTGTTGTGTCTATAATAATCTACGAACTCTTAACTGTGTCTAATAAGAATTTGGATTTAGGTCTTTGATTTGTCAATTTTGTGTTTAATAAAACTCCAATTTACTAACTTCTTGATACAAAATTGAAAGTTTAAAGACATGTAGTGTATTGTTTTAAATTGTACAACCTATGTCCAAAACTTGATATATACCACAAACTTGTAACTCTACGTTTATTTGGCATTATTTATTTTTGGCTCTATTCCATATTGGACATCTTTCTTTCTTTGTCGTATATGATATGTGTTTTTCCAATTTATTCATATAAAGAAGATATCATTTCTCTATTCTCTAGGTAATAATGGATGTCGCTGAATTTTTGGGTGATCTGTTTGATATTATATGTAATTCTGTGTTTCTTCTTTCGTTTACTGTTTTTTTTTTTTTTTTCTTCTTCTTCATACTCTAGGAGATTGGGAGAATTGGGATGAATACAATCCTTTATGCCAACTTGTAGCATGACAGCAACTCCCTGCCTGACATCCACCTCACTGTCAATGTTAGGGCTTTTTACGAGCTGTCTCATGGTACCTTCTGCCGTCCCTGTCAATATCGCTAGTGGTTGCTTTGTGAGTCTTGCTTGTTCTAGGACACATTATATGCACAGTCAGTAGATTTTCACTCTCTTATTGTTATTTATCTGTGGCCTAGATCCTAGGGTCGCATTTCAATAGTTACGTTTGCACAACAATGGTTTCTGTTTATGGAATGGAAGGTAAAATTAGTCAAGAACACCAAGTCTAGGTGATTAGTTTCTTCCGCAGATTGCATTTGTGTTTGGTTGATAAGATCTTAAGAAGGATTTGGAAATGAATTGAGAAGCGGGAGTGGGGAAGATGGATTGTGCTCAAGGATATTCACTCATCCTGTGCTGGAGACTGATACAACGTTGTCGATTTTTTTGTCCTCTTGTGCTTTTGATTTTGAATAATACATTGGATCCTAGTATTTTCCAACTTATATTTAGACTGGGAACCAGGAAATGAATTGAGAAGCGGGAGTGGGGAAGATGGATTGTGCTGAAGGATATTCACTCATCCTGAGCTGGAGTGTGATACAATGTTGTCGATTTTTTTTGTCCTGTTGTGCTTTTGATTTTGAATAATACATTGGATCCTAGTATTTTCCAACTTATGTTTAGACTGGGAACCAGGAAATCTAGCTGCTGGATCCTTGATGGCGATTGGCAGATAGGTTGCAATGCTAGTGTTAACTTATAGACAAATTTAAATAGTATTTTGTGCCATCATAATTTTGAGAATATAAACATAATGATTCAAGCAATGGAAATGGAGTGAAAACTTTTGGACCACTTAGAAAGTGTCTTTTTTTTCTTTCCTTTTTTATGGGAGGGTCTCGAAGTTGTCTTTAAAAATTACCTTTAAGACTAAATTTGAACTATGAGTTGTATGTGCAATTTTCCATACATCTTAAACTCCTTTAATTTAATGGAATTTATTTTGCCACACGTTTTCTATTTGCTGTGAGTTTCTCCACTTTAATATTTTGGATCAGACTTGCAGAAGGATAAGTCATAATAAATGCTAGTAAAATTGGAAAATGTGATCATGTAAAGAAATTGCTAGAGATATCGGCTACCTCAACTCAACTAGAAGTTTCTGCATTTTCGTATTATTGCCTCATTCTCTGTTTAGATAAAATAGTGAGAATGTCGTGCATTTATCGCTTACTTATAACCGAACATTGTGTGTAATTCTTTTCTCCATTTGGCTGATAAATCATGACATCACGTTAGGTGTTAGGTGTTAGGTGTCCGTTTCATGGGTTCAATCAATATCGTTACCTTGTATTTTGGCAGAGAAACACTTGGAAGATAAAGTGATGACTTTGTTTGTTAACTTTTTTTATTGCTTCTCACAGCTGCCGTTGGCCCTTTCAGGTACTTATGTTAAATGGGATTAAACATGGCCATGTGCGGCAATACGCGGGCGCAGGGGACTCGTGAAGAGTTGTTACTTCAGGAACTAATGCTTTGGAAATACGATAAAAGCGTTCTTAATTATATTATTGATCAGAGCAGGGATTAAAGCATTTGCTAGATTCTTGTGTCATCTAGCTGTTGCTTCTCATTCATCATTACTTACTATGTCATCATTGATTTACTATTGAAAAAAGAACAAAAAAAAAAAAAAAATTGTTTTCCGAAGTCAATCAAACAGCCATCGAGAATTGGATGGATGTTAAATTTGAATTTGCGCTAACACTTGCTAATTTGCAGAGGTTGACCAGGTTGCAAGGAAACTTTGGTCTCAGTAGCCTTCTGAACTTTTGGATCCGCCGACACTTTATTCCCACGTCATTATGTGAGTATTGCTGATGTTTGTTGAATTCCAAATTGAAACTTTATTCTTCTTCTTTTTGGATGGGAAAAAAACGTATATTAACAAAAGGCCCTACAAAAAGGGCAGATAAAATGTCAAATGAGATTACGTAGAAGACTCCTAATTGGCAAAATATTTGCTGCATCAAGTCACCATTACAAAAATCCTTTGGTAAGGGACACCAAGTAGATGAGAAATCTAACTGGATCCTAGAAAAATTCATCCCGACCACTTGAAATTCATGGATTTCTCTTAAAATCTAGATCCACTGCTACATTAGTTTAGATGGTTCTGCCCATTGAAACAAATCCTCACCCTACAATTCCGGAGAACATACCAGCCAATATCCAAAATTTGGAGGAGCTTATTCTAGCACAAGACTGCAAACCGGCAGTGGATAAAAGAGATGGGACTAATCCTCTTCATCCTTAACCAACTAGGGAGATAACATGCTAGTTCGGCAACCTCTTTTGAACTCTACAACAAGTTCTCAACCTTTTTAAACAAAGACCCTAAGAAAAGTTCACTCCTTAGGAACATCACCTTCCAAATGAGACGGCCTACCAAACTGCAAGCTTGTAACAATCACGAGCTCCCATCAAACCAGTGTGCAAAAAAGGATAGAAGTTTCTGGTTGCAATTACAGGAGAATAGACCAGGTGTGGGGAAGAGTTTCTGTGATTTGTTAGTTCTAAACCGGCTGCATGGTGATTATCCCTTGAAACTAGTTAGATAAAAATGGAGTAGGGTAATTATCGTAGAGTTAAAAACACTGATTAGACAGTCGGTATCAAAAGGTGAATGAGATTGCCAGACAGAAATCTCATTCTCTCGAAGCAAATATTAGTTTTGTTCGACGGAGTGGGTTTTCTTGTGGATGGAAATATTAGATCGTACATAAGTTTTTGTTGAGAAAGAGAGAATCCTCTAATGGATTCCCTTACTATTACAGGAAAGTGGGAATTTGTAGCCCTGAGAGGTCATTCTATCAAAAGCCAAAGGTCAATAGAATAAGTGGTTTCATAATGCTTCTCCAACTGTGTTTTCACAGGGTCTACCATTATATATATTGTCTTGAAAAAGGAAAAAGAAAGCTTAGCTACGCACCAGAAACTAAGATTTCTTATTATTTGATGTGAAGTTTATATTGGATTAAGAATATTAATAGGTAAACATATTTAGTAAGCTGAGTTGTTTCAAAGAATTCTTATTTAAGAAAAGGGGAACTGAGGGAAGGTGTCGAAGTTGTATCTCGATATGGACCTGTATGGCTACTGATTATTCCCTGCGTTGATGATTATAAATAAGCCTAAGGTCCTAAAGTGAAATAAGTGCCTTAGATCCCAAATCCAATCAAATCAGTGACAGGACAATCATTTGGATGAGTTATTGTTAACTGTTGAACTGGCTGATAATGTAGTATAGTGGCTTCTTGTCTTGTAGTGTTTTATCTTGGTGATGCCCATTTTTCACCAATAATGTGCTGATGATGCAGCCAGATTGGGTAGGAATAAAGCACCAACATAAAGAAAAGCCCATTTTACACACTTCCTTATAAAGAGAAACCAAATGCATTTTAACCCTTATTCCTTCCATTGTTACTATTCTCCAATACTCTTGTCTGTAAGCCCATTTTCACCCCCAACAAAATATCAAATCAAAAAAGCACTAAGAAATACCACCACCACACCCACTTCTCAGTTGTCACTAGGATTATTGCTATGCTGCATATGACATTGGTGAAGCCTGTTTCTTTCAAGTGGGATTTTTTTAGCACCAAGTTATTCTATCAATGATAGATTTCCCCCCTTTTTTTGGTGCTATCCACACATCTTTAAATGGGGTAAAGAAAAACTGTAAATATTTGGGTATTGTCCTCTAAAACTTATTCTTGTTTTGTTTTTGTTTCAGTTTATTAAATGAATTGCTTTTAAAAATAAATCATCTTTCTTACAAGTTACAGGATTGGTTAGATACTTCTTATGAATTATGGACATGTTGTGATTATGGACATCTTGCTTCACACGGATAGACATATTTGAGCTGAGCTCGAATTTGTTTGTATTGAATTAGCTTAGTAACCAGGTAGTGGGTTAAAATTGATAGCTTAGTCGCCCCTCCCAGCTGCCTATTTCATGCTTGATAAAACTCAAAAGATCGTTCGTATCTGTAATGATTTTGTGAGATTCTTCCACGAGAAGTTTCTAATACAATAAGCAATACAATTTTAGAGAAAACCAATCTCTTTAGCTTCTCAAAAGCAAGACCAAAATGATTTGTTAACTTGGTGGGTAAGAATCAGAAATGGCAGGCAACTGAAACAGATTCTAAGATCATGATTTGACCATTATTGGCATATTATTTGGGATTGTCAACTGTAGGTGTTTCTGAGAGTTACTTCAAAAAGGAGACATCCATCTATAAAGTTATTGAGGCTAAGTTTGGAAAGAATATGGACAGGAGGGAAAAGATAGAGAAAAGAAACCAAAGCTACAAACGTTAATTATATGATCCAATGTCTCCTCAGCACCAAGCCTGACTAAGTGGGGCAAAACCAAATAGGAAAGAAGACAAAAGCCATGTTTTGTAGGTAACAAACAACTCTCTGAGGTCTCTCTGAGGTCTCTCTGAGGTCTGATAATATCTCTCTTTTTCTACAGGTTCTCAACCAGACAGCCATAGCCCTGAAAAGTTATGGAAGATAGAGAAGAAGCAGCAGAACTAACAGCTACTACCCAAAAGCCAGGTGAATCAAGTCCCACAAGAATCAACAGAAATGAATCAACAGCAAATGAAAATCCTGCAAGAGGGTGGCTGAATTTGAGCTTGGGTGGGAATTTGCAGCCCTCCAATGGCACAGATGATTCTGATTCCCAGCCATTGATGAACAAGCCAAGCAGCAGTTCAGCTGCTGCAACTGCCAAGATGTTTTCATGTAACTACTGTATGAGGAAATTCTACAGCTCACAAGCATTGGGAGGCCACCAAAATGCCCACAAAAGGGAGAGGGGAGCAGCAAGAAGATACCAATTTCAAAAAATAATGGCGATGATGGGTCTGCCTCCATTAATGAATAATGCTGCTAATTTTATGGTTCGATCTTTGGGTGTAAGGCCTCATTCCCTTCTTCTGCAGAGACCAAACAGAGAACCCCTTGGCCATGGAGGATCTTCTGCAACTGTCGCAAGGTTCTACGGCGCCGCCACCTCCGCCGCTGCCGCCTGCACTTTGGAGGATGATTTCATGGACATAACTTGGCCTGGAAGCTTCCGATTGAACACACAACAGCAAACAGAGCCACCGATGAGCGAACCGCTGAAGCTTGATTTGAATTTAAAGCTTTAG

mRNA sequence

TATATATAAGGAGTGCAAACCATCTACAAATAATCTAACGGTCAACAATTGAGGGCACAGGATAACTATCGTACGCCGGCAGCACAATATCTCGAAAGAGAATTTCTGAATGCCGCGAAACTAAAACCGACGTGAAGTCCCAACACCGTTAGCATCCTCAAAACAGTCACAGCGTAGAATCTGAGAAGACGATGGCTTGGCCTTTCTCCGACGCTAATGTCCACCGCCCGCTCTTCATCTTCCCGGTTAACTTCATCGGCTCTTCAACTCCTGCCGCCGCCGGTCTCTGCTCCTCGGCGCCTGCCGGCCCGCTAATTCTCTGCGGCTTCCAGCATGACAGCAACTCCCTGCCTGACATCCACCTCACTGTCAATGTTAGGGCTTTTTACGAGCTGTCTCATGGTGTTTCTGAGAGTTACTTCAAAAAGGAGACATCCATCTATAAAGTTATTGAGGCTAAGTTTGGAAAGAATATGGACAGGAGGGAAAAGATAGAGAAAAGAAACCAAAGCTACAAACATAGAGAAGAAGCAGCAGAACTAACAGCTACTACCCAAAAGCCAGGTGAATCAAGTCCCACAAGAATCAACAGAAATGAATCAACAGCAAATGAAAATCCTGCAAGAGGGTGGCTGAATTTGAGCTTGGGTGGGAATTTGCAGCCCTCCAATGGCACAGATGATTCTGATTCCCAGCCATTGATGAACAAGCCAAGCAGCAGTTCAGCTGCTGCAACTGCCAAGATGTTTTCATGTAACTACTGTATGAGGAAATTCTACAGCTCACAAGCATTGGGAGGCCACCAAAATGCCCACAAAAGGGAGAGGGGAGCAGCAAGAAGATACCAATTTCAAAAAATAATGGCGATGATGGGTCTGCCTCCATTAATGAATAATGCTGCTAATTTTATGGTTCGATCTTTGGGTGTAAGGCCTCATTCCCTTCTTCTGCAGAGACCAAACAGAGAACCCCTTGGCCATGGAGGATCTTCTGCAACTGTCGCAAGGTTCTACGGCGCCGCCACCTCCGCCGCTGCCGCCTGCACTTTGGAGGATGATTTCATGGACATAACTTGGCCTGGAAGCTTCCGATTGAACACACAACAGCAAACAGAGCCACCGATGAGCGAACCGCTGAAGCTTGATTTGAATTTAAAGCTTTAG

Coding sequence (CDS)

ATGGCTTGGCCTTTCTCCGACGCTAATGTCCACCGCCCGCTCTTCATCTTCCCGGTTAACTTCATCGGCTCTTCAACTCCTGCCGCCGCCGGTCTCTGCTCCTCGGCGCCTGCCGGCCCGCTAATTCTCTGCGGCTTCCAGCATGACAGCAACTCCCTGCCTGACATCCACCTCACTGTCAATGTTAGGGCTTTTTACGAGCTGTCTCATGGTGTTTCTGAGAGTTACTTCAAAAAGGAGACATCCATCTATAAAGTTATTGAGGCTAAGTTTGGAAAGAATATGGACAGGAGGGAAAAGATAGAGAAAAGAAACCAAAGCTACAAACATAGAGAAGAAGCAGCAGAACTAACAGCTACTACCCAAAAGCCAGGTGAATCAAGTCCCACAAGAATCAACAGAAATGAATCAACAGCAAATGAAAATCCTGCAAGAGGGTGGCTGAATTTGAGCTTGGGTGGGAATTTGCAGCCCTCCAATGGCACAGATGATTCTGATTCCCAGCCATTGATGAACAAGCCAAGCAGCAGTTCAGCTGCTGCAACTGCCAAGATGTTTTCATGTAACTACTGTATGAGGAAATTCTACAGCTCACAAGCATTGGGAGGCCACCAAAATGCCCACAAAAGGGAGAGGGGAGCAGCAAGAAGATACCAATTTCAAAAAATAATGGCGATGATGGGTCTGCCTCCATTAATGAATAATGCTGCTAATTTTATGGTTCGATCTTTGGGTGTAAGGCCTCATTCCCTTCTTCTGCAGAGACCAAACAGAGAACCCCTTGGCCATGGAGGATCTTCTGCAACTGTCGCAAGGTTCTACGGCGCCGCCACCTCCGCCGCTGCCGCCTGCACTTTGGAGGATGATTTCATGGACATAACTTGGCCTGGAAGCTTCCGATTGAACACACAACAGCAAACAGAGCCACCGATGAGCGAACCGCTGAAGCTTGATTTGAATTTAAAGCTTTAG

Protein sequence

MAWPFSDANVHRPLFIFPVNFIGSSTPAAAGLCSSAPAGPLILCGFQHDSNSLPDIHLTVNVRAFYELSHGVSESYFKKETSIYKVIEAKFGKNMDRREKIEKRNQSYKHREEAAELTATTQKPGESSPTRINRNESTANENPARGWLNLSLGGNLQPSNGTDDSDSQPLMNKPSSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLPPLMNNAANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAATSAAAACTLEDDFMDITWPGSFRLNTQQQTEPPMSEPLKLDLNLKL
Homology
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BLAST of Carg16350 vs. NCBI nr
Match: KAG7011625.1 (Zinc finger protein 7 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 641.0 bits (1652), Expect = 5.7e-180
Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 0 

Query: 1   MAWPFSDANVHRPLFIFPVNFIGSSTPAAAGLCSSAPAGPLILCGFQHDSNSLPDIHLTV 60
           MAWPFSDANVHRPLFIFPVNFIGSSTPAAAGLCSSAPAGPLILCGFQHDSNSLPDIHLTV
Sbjct: 1   MAWPFSDANVHRPLFIFPVNFIGSSTPAAAGLCSSAPAGPLILCGFQHDSNSLPDIHLTV 60

Query: 61  NVRAFYELSHGVSESYFKKETSIYKVIEAKFGKNMDRREKIEKRNQSYKHREEAAELTAT 120
           NVRAFYELSHGVSESYFKKETSIYKVIEAKFGKNMDRREKIEKRNQSYKHREEAAELTAT
Sbjct: 61  NVRAFYELSHGVSESYFKKETSIYKVIEAKFGKNMDRREKIEKRNQSYKHREEAAELTAT 120

Query: 121 TQKPGESSPTRINRNESTANENPARGWLNLSLGGNLQPSNGTDDSDSQPLMNKPSSSSAA 180
           TQKPGESSPTRINRNESTANENPARGWLNLSLGGNLQPSNGTDDSDSQPLMNKPSSSSAA
Sbjct: 121 TQKPGESSPTRINRNESTANENPARGWLNLSLGGNLQPSNGTDDSDSQPLMNKPSSSSAA 180

Query: 181 ATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLPPLMNNAANFM 240
           ATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLPPLMNNAANFM
Sbjct: 181 ATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLPPLMNNAANFM 240

Query: 241 VRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAATSAAAACTLEDDFMDITWPGSFR 300
           VRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAATSAAAACTLEDDFMDITWPGSFR
Sbjct: 241 VRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAATSAAAACTLEDDFMDITWPGSFR 300

Query: 301 LNTQQQTEPPMSEPLKLDLNLKL 324
           LNTQQQTEPPMSEPLKLDLNLKL
Sbjct: 301 LNTQQQTEPPMSEPLKLDLNLKL 323

[Close]
BLAST of Carg16350 vs. NCBI nr
Match: KAG6571937.1 (Zinc finger protein 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 419.1 bits (1076), Expect = 3.5e-113
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0 

Query: 111 REEAAELTATTQKPGESSPTRINRNESTANENPARGWLNLSLGGNLQPSNGTDDSDSQPL 170
           REEAAELTATTQKPGESSPTRINRNESTANENPARGWLNLSLGGNLQPSNGTDDSDSQPL
Sbjct: 4   REEAAELTATTQKPGESSPTRINRNESTANENPARGWLNLSLGGNLQPSNGTDDSDSQPL 63

Query: 171 MNKPSSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLP 230
           MNKPSSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLP
Sbjct: 64  MNKPSSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLP 123

Query: 231 PLMNNAANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAATSAAAACTLEDDF 290
           PLMNNAANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAATSAAAACTLEDDF
Sbjct: 124 PLMNNAANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAATSAAAACTLEDDF 183

Query: 291 MDITWPGSFRLNTQQQTEPPMSEPLKLDLNLKL 324
           MDITWPGSFRLNTQQQTEPPMSEPLKLDLNLKL
Sbjct: 184 MDITWPGSFRLNTQQQTEPPMSEPLKLDLNLKL 216

[Close]
BLAST of Carg16350 vs. NCBI nr
Match: XP_022952416.1 (zinc finger protein 4-like [Cucurbita moschata] >XP_022952417.1 zinc finger protein 4-like [Cucurbita moschata] >XP_022952418.1 zinc finger protein 4-like [Cucurbita moschata])

HSP 1 Score: 411.4 bits (1056), Expect = 7.3e-111
Identity = 212/217 (97.70%), Postives = 212/217 (97.70%), Query Frame = 0 

Query: 111 REEAAELTATTQKPGESSPTRINRNESTANENPARGWLNLSLGGNLQPSNGTDDSDSQPL 170
           REEAAELTATTQKPGESSPTRINRNESTANENPARGWLNLSLGGNLQP NGTDDSDSQPL
Sbjct: 4   REEAAELTATTQKPGESSPTRINRNESTANENPARGWLNLSLGGNLQPCNGTDDSDSQPL 63

Query: 171 MNKPSSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLP 230
           MNKPSSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLP
Sbjct: 64  MNKPSSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLP 123

Query: 231 PLMNNAANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAAT----SAAAACTL 290
           PLMNNAANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAAT    SAAAACTL
Sbjct: 124 PLMNNAANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAATSASASAAAACTL 183

Query: 291 EDDFMDITWPGSFRLNTQQQTEPPMSEPLKLDLNLKL 324
           EDDFMDITWPGSFRLNTQQQTEPPMSEPLKLDLNLKL
Sbjct: 184 EDDFMDITWPGSFRLNTQQQTEPPMSEPLKLDLNLKL 220

[Close]
BLAST of Carg16350 vs. NCBI nr
Match: XP_022972416.1 (zinc finger protein 4-like [Cucurbita maxima] >XP_022972417.1 zinc finger protein 4-like [Cucurbita maxima] >XP_022972418.1 zinc finger protein 4-like [Cucurbita maxima] >XP_022972419.1 zinc finger protein 4-like [Cucurbita maxima] >XP_022972420.1 zinc finger protein 4-like [Cucurbita maxima])

HSP 1 Score: 407.9 bits (1047), Expect = 8.1e-110
Identity = 210/217 (96.77%), Postives = 212/217 (97.70%), Query Frame = 0 

Query: 111 REEAAELTATTQKPGESSPTRINRNESTANENPARGWLNLSLGGNLQPSNGTDDSDSQPL 170
           REEAAELTATTQKP ESSPTRINRNESTANENPARGWLNLSLGGNLQPSNGT+DSDSQPL
Sbjct: 4   REEAAELTATTQKPSESSPTRINRNESTANENPARGWLNLSLGGNLQPSNGTNDSDSQPL 63

Query: 171 MNKPSSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLP 230
           MNKPSSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLP
Sbjct: 64  MNKPSSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLP 123

Query: 231 PLMNNAANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYG----AATSAAAACTL 290
           PLMNNAANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYG    AATSAAAACTL
Sbjct: 124 PLMNNAANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAATSAATSAAAACTL 183

Query: 291 EDDFMDITWPGSFRLNTQQQTEPPMSEPLKLDLNLKL 324
           EDDFMDITWPGSFRLNTQQQT+PPMSEPLKLDLNLKL
Sbjct: 184 EDDFMDITWPGSFRLNTQQQTDPPMSEPLKLDLNLKL 220

[Close]
BLAST of Carg16350 vs. NCBI nr
Match: XP_023553849.1 (zinc finger protein 4-like [Cucurbita pepo subsp. pepo] >XP_023553850.1 zinc finger protein 4-like [Cucurbita pepo subsp. pepo] >XP_023553851.1 zinc finger protein 4-like [Cucurbita pepo subsp. pepo] >XP_023553852.1 zinc finger protein 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 407.5 bits (1046), Expect = 1.1e-109
Identity = 210/213 (98.59%), Postives = 210/213 (98.59%), Query Frame = 0 

Query: 112 EEAAELTATTQKPGESSPTRINRNESTANENPARGWLNLSLGGNLQPSNGTDDSDSQPLM 171
           EEAAELTATTQKPGESSPTRI  NESTANENPARGWLNLSLGGNLQPSNGTDDSDSQPLM
Sbjct: 6   EEAAELTATTQKPGESSPTRIKINESTANENPARGWLNLSLGGNLQPSNGTDDSDSQPLM 65

Query: 172 NKP-SSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLP 231
           NKP SSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLP
Sbjct: 66  NKPSSSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLP 125

Query: 232 PLMNNAANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAATSAAAACTLEDDF 291
           PLMNNAANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAATSAAAACTLEDDF
Sbjct: 126 PLMNNAANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAATSAAAACTLEDDF 185

Query: 292 MDITWPGSFRLNTQQQTEPPMSEPLKLDLNLKL 324
           MDITWPGSFRLNTQQQTEPPMSEPLKLDLNLKL
Sbjct: 186 MDITWPGSFRLNTQQQTEPPMSEPLKLDLNLKL 218

[Close]
BLAST of Carg16350 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 3.9e-14
Identity = 73/212 (34.43%), Postives = 95/212 (44.81%), Query Frame = 0 

Query: 127 SSPTRINRNESTANENPARGWLNLSLGGNLQPSNGTDDSDSQ---PLMNKPSSSS----- 186
           SS +++  N S   E+     LNLSL  N   +N  D   S    PL +   SS+     
Sbjct: 15  SSSSQVASNLSPVGEDYKPISLNLSLSFNNNNNNNLDLESSSLTLPLSSTSESSNPEQQQ 74

Query: 187 ---AAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARR------------------ 246
               + + ++FSCNYC RKFYSSQALGGHQNAHKRER  A+R                  
Sbjct: 75  QQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSN 134

Query: 247 YQFQKIMAMMGLPPLMNNAANFMV--RSLGVRPHS----LLLQRPNREPLGHGGSSATVA 304
           Y      A +   PL  +    M   R+LG+R HS    + + R   E L        +A
Sbjct: 135 YAAAATAAALSCLPLHGSGNGNMTSFRTLGIRAHSSAHDVSMTRQTPETL-----IRNIA 194

[Close]
BLAST of Carg16350 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 5.6e-13
Identity = 57/151 (37.75%), Postives = 74/151 (49.01%), Query Frame = 0 

Query: 176 SSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLPPLMNN 235
           S+   A  ++FSCNYC RKFYSSQALGGHQNAHKRER  A+R      M M  +    + 
Sbjct: 49  STKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR-----AMHMGRMFGHHHR 108

Query: 236 AANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGA---ATSAAAACTLEDDFMD 295
              +   SLG++ HS LL     +P         V+RF+       +       +D   D
Sbjct: 109 PYTYTSSSLGMQAHSGLLHHTLSQP------QPLVSRFHHQGYFGNTVPLFFDYDDGGSD 168

Query: 296 ITWPGSFRLNTQQQTEPPM---SEPLKLDLN 321
             WPGSFR   ++   P +   S    LDLN
Sbjct: 169 FFWPGSFRQVVEEAEAPVVVVASTESGLDLN 188

[Close]
BLAST of Carg16350 vs. ExPASy Swiss-Prot
Match: Q39262 (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 5.2e-11
Identity = 40/82 (48.78%), Postives = 49/82 (59.76%), Query Frame = 0 

Query: 175 SSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAM-----MGL 234
           + S+ +   K+FSCNYC R FYSSQALGGHQNAHKRER  A+R Q     A       G 
Sbjct: 50  NESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGF 109

Query: 235 PPLMNNAANFMVRSLGVRPHSL 252
            PL  +      RSLG++ HS+
Sbjct: 110 SPLPFHGQYNNHRSLGIQAHSI 131

[Close]
BLAST of Carg16350 vs. ExPASy Swiss-Prot
Match: Q9FFX4 (Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 6.8e-11
Identity = 38/82 (46.34%), Postives = 51/82 (62.20%), Query Frame = 0 

Query: 175 SSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLPPLMN 234
           SSS+  A+ ++F C YC RKFY+SQALGGHQNAHKRER AARR     +  +   PP+++
Sbjct: 27  SSSAHPASHRLFPCQYCPRKFYTSQALGGHQNAHKRERAAARR----NLGVLANSPPILD 86

Query: 235 NAANFMVRSLGVRPHSLLLQRP 257
           +   F+      RP+    Q P
Sbjct: 87  DNNTFL------RPYPCFYQNP 98

[Close]
BLAST of Carg16350 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.2e-10
Identity = 49/97 (50.52%), Postives = 59/97 (60.82%), Query Frame = 0 

Query: 145 RGWLNLSLGGNLQPSNGTDDSDSQPLMN--KPSSSSAA---------ATAKMFSCNYCMR 204
           +G  +L LG  L  S GT  S    L++  K SSSS +         A  ++FSCNYC R
Sbjct: 17  QGHQDLELGLTLL-SRGTATSSELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQR 76

Query: 205 KFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLP 231
           KFYSSQALGGHQNAHKRER  A+R Q+ K M +  LP
Sbjct: 77  KFYSSQALGGHQNAHKRERTLAKRGQYYK-MTLSSLP 111

[Close]
BLAST of Carg16350 vs. ExPASy TrEMBL
Match: A0A6J1GK61 (zinc finger protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111455111 PE=4 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 3.5e-111
Identity = 212/217 (97.70%), Postives = 212/217 (97.70%), Query Frame = 0 

Query: 111 REEAAELTATTQKPGESSPTRINRNESTANENPARGWLNLSLGGNLQPSNGTDDSDSQPL 170
           REEAAELTATTQKPGESSPTRINRNESTANENPARGWLNLSLGGNLQP NGTDDSDSQPL
Sbjct: 4   REEAAELTATTQKPGESSPTRINRNESTANENPARGWLNLSLGGNLQPCNGTDDSDSQPL 63

Query: 171 MNKPSSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLP 230
           MNKPSSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLP
Sbjct: 64  MNKPSSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLP 123

Query: 231 PLMNNAANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAAT----SAAAACTL 290
           PLMNNAANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAAT    SAAAACTL
Sbjct: 124 PLMNNAANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAATSASASAAAACTL 183

Query: 291 EDDFMDITWPGSFRLNTQQQTEPPMSEPLKLDLNLKL 324
           EDDFMDITWPGSFRLNTQQQTEPPMSEPLKLDLNLKL
Sbjct: 184 EDDFMDITWPGSFRLNTQQQTEPPMSEPLKLDLNLKL 220

[Close]
BLAST of Carg16350 vs. ExPASy TrEMBL
Match: A0A6J1I5X1 (zinc finger protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111470983 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 3.9e-110
Identity = 210/217 (96.77%), Postives = 212/217 (97.70%), Query Frame = 0 

Query: 111 REEAAELTATTQKPGESSPTRINRNESTANENPARGWLNLSLGGNLQPSNGTDDSDSQPL 170
           REEAAELTATTQKP ESSPTRINRNESTANENPARGWLNLSLGGNLQPSNGT+DSDSQPL
Sbjct: 4   REEAAELTATTQKPSESSPTRINRNESTANENPARGWLNLSLGGNLQPSNGTNDSDSQPL 63

Query: 171 MNKPSSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLP 230
           MNKPSSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLP
Sbjct: 64  MNKPSSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLP 123

Query: 231 PLMNNAANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYG----AATSAAAACTL 290
           PLMNNAANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYG    AATSAAAACTL
Sbjct: 124 PLMNNAANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAATSAATSAAAACTL 183

Query: 291 EDDFMDITWPGSFRLNTQQQTEPPMSEPLKLDLNLKL 324
           EDDFMDITWPGSFRLNTQQQT+PPMSEPLKLDLNLKL
Sbjct: 184 EDDFMDITWPGSFRLNTQQQTDPPMSEPLKLDLNLKL 220

[Close]
BLAST of Carg16350 vs. ExPASy TrEMBL
Match: A0A5A7SMP7 (Zinc finger protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001010 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 3.4e-61
Identity = 146/219 (66.67%), Postives = 163/219 (74.43%), Query Frame = 0 

Query: 111 REEAAELTATTQKPGESSPTRINRNESTANENPARGWLNLSLGGNLQPSNGTDDSDSQPL 170
           REE  +L    QK  ES+ TRINRN+S ANEN A+GWLNLSLGGN Q SN  D SDSQPL
Sbjct: 4   REETTKL-RDIQKADESNSTRINRNDSIANENLAKGWLNLSLGGNFQTSNDKDYSDSQPL 63

Query: 171 MNKPSSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLP 230
           MNK ++SSA    KMFSC++CMRKFYSSQALGGHQNAHKRERGAARRYQFQ+IM MMGLP
Sbjct: 64  MNKANNSSA---TKMFSCHFCMRKFYSSQALGGHQNAHKRERGAARRYQFQRIMTMMGLP 123

Query: 231 PLMNNAAN-FMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAATS----AAAACT 290
           P MNNAAN  M+RSLGVRPHSL L         HG S+ATVARF  A  +      A C+
Sbjct: 124 PSMNNAANSIMLRSLGVRPHSLRLH-------SHGESAATVARFENATATIGRGTTAFCS 183

Query: 291 LEDD-FMDITWPGSFRLNTQQQTEPPMSEPLKLDLNLKL 324
           LED+  M ITWPGSFRLNTQ++TEP  +    LDLNLKL
Sbjct: 184 LEDESLMHITWPGSFRLNTQRKTEPSTT----LDLNLKL 207

[Close]
BLAST of Carg16350 vs. ExPASy TrEMBL
Match: A0A1S3C0M2 (zinc finger protein 4-like OS=Cucumis melo OX=3656 GN=LOC103495286 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 3.4e-61
Identity = 146/219 (66.67%), Postives = 163/219 (74.43%), Query Frame = 0 

Query: 111 REEAAELTATTQKPGESSPTRINRNESTANENPARGWLNLSLGGNLQPSNGTDDSDSQPL 170
           REE  +L    QK  ES+ TRINRN+S ANEN A+GWLNLSLGGN Q SN  D SDSQPL
Sbjct: 4   REETTKL-RDIQKADESNSTRINRNDSIANENLAKGWLNLSLGGNFQTSNDKDYSDSQPL 63

Query: 171 MNKPSSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLP 230
           MNK ++SSA    KMFSC++CMRKFYSSQALGGHQNAHKRERGAARRYQFQ+IM MMGLP
Sbjct: 64  MNKANNSSA---TKMFSCHFCMRKFYSSQALGGHQNAHKRERGAARRYQFQRIMTMMGLP 123

Query: 231 PLMNNAAN-FMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAATS----AAAACT 290
           P MNNAAN  M+RSLGVRPHSL L         HG S+ATVARF  A  +      A C+
Sbjct: 124 PSMNNAANSIMLRSLGVRPHSLRLH-------SHGESAATVARFENATATIGRGTTAFCS 183

Query: 291 LEDD-FMDITWPGSFRLNTQQQTEPPMSEPLKLDLNLKL 324
           LED+  M ITWPGSFRLNTQ++TEP  +    LDLNLKL
Sbjct: 184 LEDESLMHITWPGSFRLNTQRKTEPSTT----LDLNLKL 207

[Close]
BLAST of Carg16350 vs. ExPASy TrEMBL
Match: A0A6J1D3Z2 (zinc finger protein 4-like OS=Momordica charantia OX=3673 GN=LOC111017369 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 7.0e-59
Identity = 144/221 (65.16%), Postives = 160/221 (72.40%), Query Frame = 0 

Query: 112 EEAAELTATTQKPGESSPTRINRNESTANENPARGWLNLSLGGNLQPSNGTDDSDSQPLM 171
           EE AELTA TQKPGES+ T+ NRNES   E+PA GWL+LSLGGNLQ  NG  DS+ QPLM
Sbjct: 6   EETAELTA-TQKPGESNSTKNNRNESMECESPAEGWLDLSLGGNLQAPNGA-DSEPQPLM 65

Query: 172 NKPSSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLP- 231
           NKPS+       K+FSCN+CMRKFYSSQALGGHQNAHKRERGA RRY+FQ+IMAMMGLP 
Sbjct: 66  NKPSN----LAPKVFSCNFCMRKFYSSQALGGHQNAHKRERGAVRRYKFQRIMAMMGLPL 125

Query: 232 PLMNNAANFMVRSLGVRPHSLLLQRPNREPLGHGGSSA---TVARF-----YGAATSAAA 291
           PLMNNAAN MVRSL VRPHSL           HGGSSA   T ARF      G     AA
Sbjct: 126 PLMNNAANLMVRSLSVRPHSL--------GHSHGGSSAAATTAARFDGDGGGGKRLKMAA 185

Query: 292 ACTLEDDFMDITWPGSFRLNTQQQTEPPMSEPLKLDLNLKL 324
           A  L ++ MD+ WPGSFR N+QQ+T     EPLKLDLNL+L
Sbjct: 186 AAILGEELMDMGWPGSFRFNSQQET-----EPLKLDLNLRL 207

[Close]
BLAST of Carg16350 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 )

HSP 1 Score: 80.5 bits (197), Expect = 2.8e-15
Identity = 73/212 (34.43%), Postives = 95/212 (44.81%), Query Frame = 0 

Query: 127 SSPTRINRNESTANENPARGWLNLSLGGNLQPSNGTDDSDSQ---PLMNKPSSSS----- 186
           SS +++  N S   E+     LNLSL  N   +N  D   S    PL +   SS+     
Sbjct: 15  SSSSQVASNLSPVGEDYKPISLNLSLSFNNNNNNNLDLESSSLTLPLSSTSESSNPEQQQ 74

Query: 187 ---AAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARR------------------ 246
               + + ++FSCNYC RKFYSSQALGGHQNAHKRER  A+R                  
Sbjct: 75  QQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSN 134

Query: 247 YQFQKIMAMMGLPPLMNNAANFMV--RSLGVRPHS----LLLQRPNREPLGHGGSSATVA 304
           Y      A +   PL  +    M   R+LG+R HS    + + R   E L        +A
Sbjct: 135 YAAAATAAALSCLPLHGSGNGNMTSFRTLGIRAHSSAHDVSMTRQTPETL-----IRNIA 194

[Close]
BLAST of Carg16350 vs. TAIR 10
Match: AT1G24625.1 (zinc finger protein 7 )

HSP 1 Score: 76.6 bits (187), Expect = 4.0e-14
Identity = 57/151 (37.75%), Postives = 74/151 (49.01%), Query Frame = 0 

Query: 176 SSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLPPLMNN 235
           S+   A  ++FSCNYC RKFYSSQALGGHQNAHKRER  A+R      M M  +    + 
Sbjct: 49  STKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR-----AMHMGRMFGHHHR 108

Query: 236 AANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGA---ATSAAAACTLEDDFMD 295
              +   SLG++ HS LL     +P         V+RF+       +       +D   D
Sbjct: 109 PYTYTSSSLGMQAHSGLLHHTLSQP------QPLVSRFHHQGYFGNTVPLFFDYDDGGSD 168

Query: 296 ITWPGSFRLNTQQQTEPPM---SEPLKLDLN 321
             WPGSFR   ++   P +   S    LDLN
Sbjct: 169 FFWPGSFRQVVEEAEAPVVVVASTESGLDLN 188

[Close]
BLAST of Carg16350 vs. TAIR 10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 70.5 bits (171), Expect = 2.8e-12
Identity = 40/82 (48.78%), Postives = 49/82 (59.76%), Query Frame = 0 

Query: 176 SSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLP----- 235
           + S +   K+FSCNYC R FYSSQALGGHQNAHKRER  A+R Q     A  G P     
Sbjct: 94  NGSTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMASAAAFGHPYGFAP 153

Query: 236 -PLMNNAANFMVRSLGVRPHSL 252
            P     +N   R+LG++ HS+
Sbjct: 154 VPFHGQYSN---RTLGIQAHSM 172

[Close]
BLAST of Carg16350 vs. TAIR 10
Match: AT5G25160.1 (zinc finger protein 3 )

HSP 1 Score: 70.1 bits (170), Expect = 3.7e-12
Identity = 40/82 (48.78%), Postives = 49/82 (59.76%), Query Frame = 0 

Query: 175 SSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAM-----MGL 234
           + S+ +   K+FSCNYC R FYSSQALGGHQNAHKRER  A+R Q     A       G 
Sbjct: 50  NESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGF 109

Query: 235 PPLMNNAANFMVRSLGVRPHSL 252
            PL  +      RSLG++ HS+
Sbjct: 110 SPLPFHGQYNNHRSLGIQAHSI 131

[Close]
BLAST of Carg16350 vs. TAIR 10
Match: AT5G14010.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 69.7 bits (169), Expect = 4.9e-12
Identity = 38/82 (46.34%), Postives = 51/82 (62.20%), Query Frame = 0 

Query: 175 SSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLPPLMN 234
           SSS+  A+ ++F C YC RKFY+SQALGGHQNAHKRER AARR     +  +   PP+++
Sbjct: 27  SSSAHPASHRLFPCQYCPRKFYTSQALGGHQNAHKRERAAARR----NLGVLANSPPILD 86

Query: 235 NAANFMVRSLGVRPHSLLLQRP 257
           +   F+      RP+    Q P
Sbjct: 87  DNNTFL------RPYPCFYQNP 98

The following BLAST results are available for this feature:
BLAST of Carg16350 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7011625.15.7e-180100.00Zinc finger protein 7 [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6571937.13.5e-113100.00Zinc finger protein 7, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022952416.17.3e-11197.70zinc finger protein 4-like [Cucurbita moschata] >XP_022952417.1 zinc finger prot... [more]
XP_022972416.18.1e-11096.77zinc finger protein 4-like [Cucurbita maxima] >XP_022972417.1 zinc finger protei... [more]
XP_023553849.11.1e-10998.59zinc finger protein 4-like [Cucurbita pepo subsp. pepo] >XP_023553850.1 zinc fin... [more]
BLAST of Carg16350 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q392633.9e-1434.43Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2[more]
Q392665.6e-1337.75Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1[more]
Q392625.2e-1148.78Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1[more]
Q9FFX46.8e-1146.34Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1[more]
Q424851.2e-1050.52Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1[more]
BLAST of Carg16350 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GK613.5e-11197.70zinc finger protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111455111 PE=4 SV... [more]
A0A6J1I5X13.9e-11096.77zinc finger protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111470983 PE=4 SV=1[more]
A0A5A7SMP73.4e-6166.67Zinc finger protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... [more]
A0A1S3C0M23.4e-6166.67zinc finger protein 4-like OS=Cucumis melo OX=3656 GN=LOC103495286 PE=4 SV=1[more]
A0A6J1D3Z27.0e-5965.16zinc finger protein 4-like OS=Momordica charantia OX=3673 GN=LOC111017369 PE=4 S... [more]
BLAST of Carg16350 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G66140.12.8e-1534.43zinc finger protein 4 [more]
AT1G24625.14.0e-1437.75zinc finger protein 7 [more]
AT5G10970.12.8e-1248.78C2H2 and C2HC zinc fingers superfamily protein [more]
AT5G25160.13.7e-1248.78zinc finger protein 3 [more]
AT5G14010.14.9e-1246.34C2H2 and C2HC zinc fingers superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 98..118
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 165..227
e-value: 4.4E-6
score: 28.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..145
NoneNo IPR availablePANTHERPTHR47593ZINC FINGER PROTEIN 4-LIKEcoord: 108..323
NoneNo IPR availablePANTHERPTHR47593:SF8ZINC FINGER PROTEIN 4-LIKEcoord: 108..323
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 188..208
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 186..213
score: 11.031986
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 183..212

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg16350-RACarg16350-RAmRNA