Carg16158 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16158
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	transportin-1-like
Location	Carg_Chr20: 3577102 .. 3586044 (-)
RNA-Seq Expression	Carg16158
Synteny	Carg16158

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTTGTAATCTGCGTCCTGATATGTCTGACTGCACTCGCATCGACTTAGCTCTGAAAGTGCCGAATGTAAGGATCGTGATCATACTTAAATCTATTTATTTATATGTATCTGCAAAATGAAGGTCTCGGTTCCAATCTACCTCTGGCATAGGTCTTCCTCCTGTGGTGTCCTCGATTTGTATTACAGAAAAGAGACTGGCATCTATCTGACTATCACCAACTCGATAGACGCAGGTGGTAATGATTCATTTATTTTCTATACTTTAATGCGTTGATAAATCTAGAAAGTAGATGCTCCAATAGTAAAAAGCGGCCCCAATTACCACAGCTGTCTTAGCGCCACACGTTCTTGCATAGTCCATTAGGATGCGAAAATTACGTGACGGTCATTCTTTTACCGGCGTGCCCAATCTTCTATTACTTATTTCTGTCTTGGTTTTTTTTTTCACTTAGCATGAAGTATTCTTAAAAGACCCCAGGTTCTTCACATCATTGAGACAGCTCAAGATTTACTATATCGGTCAGAGTACTAACGTTGGCGCAACCACGTGCCTTGTGTGATTCGTGTTCGTTAACATATTCCTTTCCTCTAATATTGTGGGCTATTATGTTGGTTGATACCGTATACTAGACAGATAAAAGTACTTCATGTATTATGTCTATATCTACATATTTTTCCACCTTCTCAATAGTCTATAATCTAACATCTTGGTTCACCTAAATTGCGAAGGGAACATATTTAGTACCAAAATGTTTCGTCAATATTTATCACTCGCGCAGTCCCTAACGTTTAGCGTCATAATTGCCAAGTGCTTAGCAAGAACTCCTTGAATTTCTAAATGTGTTGGGGATGAGAAATTCTTTCCCCCCTAGCATCTTAGAAATGCCCAACTCTTCCTTTGTACAGTTTCAGGCAAAAAAATAAAATTCGTCGACCAAACTGTAACCGAAACTCTCGCTCCGTAAGGAAATAATTTTATCTCACCCTTCATTAAAATCTTTCTTTCTAATCGCTCATTGCAGGCTTTACAAGCTTCCTCACACCCCTAAAATCTTCGATTCTATATTTCCTAATATTTGATCTATCACTCAAAGTTTCAGGTTACAGGACATCCACTGTATTACCAATATATCTTGCTATTAATCCGTCTTCCATAGTAGTGTTTTTACGTGGGATGCCTCGCTATTAGTTCTCCTAACCCCTTTCTTGCCTCCACAGCCAAGCTAACTGTGTCCTTTTTTTAGCGAATTCTCCTCGTTCGGGTAGTCCTCCTGTCAACTGAGAGTCTATTAATGGCGAGTGATTTGTTTAGGTGGAGTGTACACTCCCATCCAACTCTTTATTAAAATAGGTAGCGTTTCTACTTCTCTCCATTCCAATCCTCAGCCTTTATGTTTCGTCGTATTCTCTACCAATTACTTCTCCCCTCAAGCCTAAGAGCGTCCTTGGTTGGCCATTGTCAGTTAAGCTTTCTTATCATCCTAATCTATTGATTGGTTTTGACCTCCACCCGTTCATATATTCCCGTGCCCATCGAGTATAAGCCCCTCCTTTAGTTGTCTTAGACGTTCTACTTCCACTCTCACTCGAGGTGTTGTGTATTCTATAGCACACCTATGAAAGCGCGTTTAACCGAGGAGCCGCTACGCTCGCTGCTATAAGTCTAGGTCCATTCTTGTCAACCTAGAAATCTTGGCAGCTTGGATAACTGAATAGCCTGGAGAAAAGACCAAGGAGAGCTATCAATGTCCCATTGCTCCCTTGGTCGCCAAGACTGATAGGTTTCGCTCATTAGTGGAACCTTTATTCACCTCCCATTTGACTGTATTTTAAGGTGATACCGCTTATGATTCTGGTCTTAGTAAATCACCAAGTTGAGTGAAGGTTTGATATCATTTACTCGACCATTTATTCATCATGAGTGTTGCTGTTTCTTATTATCTCAATCTCCTCTCCTCCCAACTCGTGATTTTTGAAGATAAGGTTATCATCCCAATTTCGTATATATGTCTATAGATATGCAAAAAATTACATATAGCAATCAATGTATGACTCATACTTGCTTATCATTTCTGAACCTTAAGATAATAAAGGTATCACATACATGAATACAATTCATAACATTCGTGTTTCTCTGGTATGACCCCTCATATAATCGAATATCTGCTGATAACGGAGAACCATCTTGTTAGATTTCGATAAATTTCCTTATCCTAAGAGAAGATACATGTCTATCTTGTTGACTACTTTTCTCTATAAGATATACTTTAATGCATTACTAAGATTGCAGGAATGATTGAAATTTGTCTTAATAATCGGCGATAATGTAGAGAAAAAAATTCCATTGACGTGTTTAGTTGAATATAATTTAATTAATTTCAATAATATTATAGCTAAATTCCTTTTAATCAAACTACTCTGTGACTACCCACACTGTAGAGGGAGGAGTAACGAACACCCTTTATAATGGTGTGGAAACCTCTCCTCTCCCTAACAGACGCGTTTTAAAAACCTTAAGGGTAAGCCGAAAAAGGACAATATCTGCTAGTGGTGGGCTTGTGCCGTTACAAATGGTATCAGAGCCAGACACTAGACGATGTGCTAGCGAGGAGGCTGTTCCCCGAAGGGGGTAGACACGAGGCGATGTGCCAGCAAGGAAGTTGGGCTTCGAAGGGGGGTGGATTTGGTGGAGGTCCCACATCGATTGGAGAAAGTAACGAGTGCCAGCAAGGACGTTAGGCCTTGAAGGGGGGTGGATTGTGATATCCCACATTAGTTGGGGAGGAGAATGAAACACCCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAAATGCGTTTTAAAAACCTTGAGGGTAAGCCCGAAAGGGAAAGCCCAAAAGGAAAATATCTGCTAGCGGTGGGCTTGGGTCGTAACACTACTATACTTATTTTTCTAAATTGTGGTAAATATTAATCGTGTGGTTTGCTTATTCCATGTCAAAATAGAAAAATTTCAGTGATATTTTTGGGGATCAAAGTTGAAATATTTAGAATGCTTAGAGAAGACTTGTGTGGCTGTGGAATTCTGCTGTTATAGTATTCAAGAATTGACAAAATTAGGCCCCTGGGAATATGAACTATTTGATAATGTTCTCATGGGACTTTTAGAAGCATGAGTTGGATGTGTATCGTATTTCACTTTTTCCCCCATCTTAGGGCATTGGAACACAGCAAGGGTACGAACAATTTGATAAAGTTCTCATGGGACTTCTACGAAGATTATTAGACAACAACAAGAGGGTGCAAGAAGCTGCTTGTTCTGCTTTTGCAACGCTGGAGGAGGTTCTTTCATTGAAACTTTATTTTACCTGCTAATGAATTATCCCTGTATAGTTCATGATGGGCCTTTAGTAACTTGCAGGAAGCTGCAGAGGAGTTGGCGCCTCATTTGAAAAATATATTACATCACCTAATATGTGCTTTTGGGAAGTATCAGGTATCCTAAGAATAGTATGATGCTCTGTTTCTTTCTGGATTGAAGGCTTTCTTCTCTTCGAGCTTGTATGTATTTGACTTGTATACGTGTTATCCAGAGACGGAATCTACGGATAGTGTATGATGCTATTGGAACCTTAGCAGATGCTGTTGGAGGGGAGCTGAATCAGGTAACACATTAATTTTGATGCATTTGTAGGCCAGCAACTTGTTGAGTGTAGTTTTGATATTCTGCATTTAGTACTTCGAAAACTGATTTCGTTTGTTTTGTCATGATTGCAGCCTGTTTATCTTGATATTCTCATGCCTCCATTAATTGCCAAATGGCAGCAACTTTCGAACTCAGATAAAGATCTTTTTCCGCTGTTGGAGTGCTTCACGTCTATAGCACAGGTCTCTATTTGTGTTTTTGGTTGATTGGCTCGTTGTTTTTTATGAGTACTTACATTTGTTTGTATTTCCCACTGTGAGATCCCACGTCGTTGGAGAGGGGAAACTTCTCCCTAGTAGACGCGTTTTAAAACCGTGAGGCTGACGGTGATACGTAATGGGCCAAAGTGGACAATATTTGCTAGCAATGGGTTTGGGCTGTTACAAATGGTATCAGAGCCAAACACTGAATAGTGTGCCAGCGAGGACGTTGGGCCTTGAAGGGGGGTGGATTGTGAGATCCCACATTGGTTGGAGAGGGGAACGAAGCATTCCTTATAAGGGTGTGGAAACATTTCCCTAGTAGACGCGTTTTAAAACCGTGAGACTAACGGTGATACGTAACAGGCCAAAGTGGACAATATTTGCTAGCGGTAAGTTTAGGCTATTACAAATGGTATCAAAGCCAGACACTGGGCGGTGTGCCAGTGAGGATGTTGGGCCCCGAAGGGAGGTGGATTGTGAGATCCCACATCGGTTGGAGAAGGGAACGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGTGTTTTAAAACCGTGAGGCTGACGACAATACGTAACGGACCAAAGCGGACAATATCTGCTAGCGGTGGGTTTGAGCCATTACACCCACAATTCTAATTTTACAAATTATTGAAACGCTTTTCAGAACAGTTGGCAAAGCTGTGCAGTACCTAATTATATTACCAAAGATCTTCTTTAATTCCTTCCCTTTTTCTAGGCTTTGGGGACTGGATTTGCCCAATTCGCTCAGCCTGTGTATCAGAGATGCATAAGCATTATTCAGACCCAACAAATGGCAAAGGTTTGCCTGATTATTGAATTTCAATCAATACTTATTTAACTCCCCTTAATGACAGCTTTCGTTTGCTCTTCGTTTCTCTGTGCTTCTTTATGATATAATATAATGAAGGTGCTTAAGCTTTATCTCATACTTGTGCTTAGCTTCTTTATTAATCGACCATGTTATCCTCTTCACCTCTTTTAAAATAATGCAAAGAAGGTCCTCAGTAGCTTGAGAAGTGCAGTAAGCATGTCTTGATCTTGATTTATTTTTCTTCTCTCTGAACTGAGTGTGCAATATGTTCACTCCCGTGTGTGTACTAAGTGTCTTAGGCTGGTTGGTCCTTGATGATATGCGCGGTTACGTTTTAACTATAGCATTTATCACTGCTAACCGCAATTCTATACTTGTTTGATTCATCTTCTTAAGATGTCGACTTGATTTTCTATTGCAGGTCGATCCTGTTTCTGCCGGGGTTCAGTACGATAAAGAGTTCATTGTATGCTGTCTTGATCTTCTTTCAGGACTTGCGGAGGGTCTTGGCAGTGGGATAGAAAGTTTGGTAATTAAATTCGAAACGAACCAGTTGCCTTTAATTAAAATCGAACTATGACAATATATTCTGAACTTGCTTGCGTGTCGCGTTTCATGGAATTTCCATCAGGTTTCTCAAAGCAACCTGAGGGACTTGCTCCTGCAATGTTGCATGGATGAGGCTTCTGATGTCCGACAGAGTGCCTTTGCATTGCTTGGGGATCTTGGAAGAGTAAGCATTGGGATGGAAAAAGTTGCTCCTTCTTCCGTTGTTGGAATTTTATTAATCTTCTGTTGTGTTCATGGCTTATTTATACTTTTGTGGTTAAGGTATGCCATGTTCATTTGCAACCACGTTTGTCGGAATTTCTAACCGCTGCAGCGAAGCAACTGGTAAGTAAAACGATTTATGGTTTTCGTTTCTGATTTGAAGTTGTTTTATTCGTCTTATACTTTGACTGCACAGGATACTCCTAAGCTGAGGGACATTGTTTCTGTGGCAAACAATGCCTGTTGGGCAATTGGAGAATTAGCTGTTAAGGTATGTGTAGACTTTGATATGCATAGTACCGGATATTGAGCTTGTATGGGTATATGTCTTCACACATCCTTCTTGTTGTGACTATTCAAGTCTATGTTTGGCATTGGGATAAAGATCATGTGTGGAAAAGGGTAGGGATCTTTTTGAAAGGAAAATAGTTTGTTGTGGGATCCCTAGTCGGTTGGAGAGGGGAACAAAGCATTCCTTACAAGGGTGTGAAAACCTATCTAGTAGATGCGTTTTAAAACCTTGAGGGGAAGCTTAGAACAAAAAGCCCAAAGAGGACAATATCTGCTAGTGGTGGGCTTGGGCTGTTACAAATTGTATCAGAGGCAGTCACTGGGCGATGTGCCAACGAGGACGCTGGGCTCCCAAGGGGGGTGGATTGTAGGATTCCACATTGGTTGGAGGGGGGATTCCTTACAAGGATGTAGAAACCTATTCCTAGCAGACTTGTTTTAAAATCTTGAGGGAAAGCCTAGAAGGGAAAGCCCAAAGAGGACAATGTTTGCCAGCGGTGGGCGGCGGGCGGCGAGCTTGGGCTGTTACAAATGGTATCAAAGTTAGTCACCGGGCGATGTGCCAGCGAGGACGTTGGCCCCCGGGATGGACTGTGGGATCCCACATTGGTTGGAGAGGGGAACGAAGCATTCTTTACAAGGGTGTGGAAACCTCTCCCTAACAGACGCGTTTTAAAACCTTGAGGGGAAGCCTAGAAGGGAAAGTCTAAAGAGGACAATGTCTGCCAGCAGTGGGCGGTAAGCGGTGGGCGGCGGGCTTGGGCTGTTACAAATGGTATCAAAGCCAGTCACCGGGCGATGTGCCAGCGAGGACGTTGGCCCCCGGGGTGGACTATGGGTTCCCACATCGGTTGGAGAGGGGAACGAAACATTCTTTACAAGTGTGTGGAAACCCCTCCCTAGCAGACACGTTTTAAAACCTTGAGGGGAAGCCTAGAAAGGAAAGTCCAAAGAGTACAATGTCTGCCAGCAGTGGGCGGTGGGCTTGGGTTGTTACAAATGGTATCAAAGCCAGTCATCGGGTGATGTGCCAGCGAGGACGCTGGCCTCCGAGTTGGATTGTGGGATCCCACATCGGTTGGAGAGGGGAACAATGCATTCTTTACAAGAGTGTGGAAACCTCTCCCTAGCAGACACGTTTTAAAACCTCGAGGGGAAGCCTAGAAAAGAAAGCCCAAAGAGGACAATATCTACTAGCGGTGGGTTTGAGTTGTTATATTTATACATGCAAGTAACTTATGTAATGCATCCGATGGTAAAAGAAAGAACTCGTTATACTAAAAGAAGGAACTCGTTATGGTGATTCAGGCATGAACAACATCAATCTTTTTCGTGGCAAATGAATTTTCAAGCAGTTATTTTACATTATTTGAAACTGTTATTGATTTAGGTACACCAAGACATTTCTCCCGTCGTTATGACCGTGATTTCAAGCTTGGTCCCGATTCTCCAACACGCACAGGTGACGGTCCTTTTCTTTTACACGCACATAGTAACATGTCTCATTATTTATGTATTATGGCACTGATAAGCCTCTTGTTCGATGGAATATGGCACTGAATGTGTGTGTGTGTGTATTTAACAGGATCATCATTGTTTAGTTTCATTTCTTTGTGCTATGCAGGAGCTAAATAAATCTCTAGTAGAAAATAGTGCAATTACTCTTGGAAGGATTGCATGGGTTTGCCCTCAGCTAGTGTCACCACATATGGAACATTTCATGCAACCATGGTGCACTGCTTTATCCATGTAAGGTTCTCTACGATATCGATGTCGTTTTAAAAGGATATAGCTACACCCAAGACACGAAACCACAACCGTTACTGAAAGTTAAAATTTACGAGACGCTGGGTTAAGATTTTCATCATATTGGCAGGATACGGGATGACGTAGAAAAGGAGGATGCTTTCCGAGGTCTTTGTGCTCTGGTAAGGCTCTCGAGTTCGTCGCAAGTAGTATATATCTTTCCGATTAATAATCATTATGCCTTTGTTACTTTCAGGCTAAATCAAATCCATCAGGAGCTCTAAGTTCACTTGCTTTCATGTGCAAAGCCATTACGAGTTGGCATGTAAGCATCGAAACTTTGTTTATCGCTATCGACATCGCTCGATCTTTTCTTCCTAAGCTGAGCTTATTACCTGCAGGAAATAAGGAGTCAAGATCTTCATAATGAAGTATGCCAAGTTCTGCAAGGCTATAAACAGGTTGGTAACTAAACCAATTCTAAGGCAAATATTGTTTATATCGTTGGTATCGAACGAAAGTTCAAATTCTGGAGTACGTTATAAACTGGTCGAGTTCGTTTATGTATGTTCGTATGAATGTCGATTTGGCAGATGCTGAGAAATGGTGGGTGGGAGCAGTGTATTTCTTCTCTAGAACCATCTGTGAAGGAGAAACTATCAAAATATCAAGTATAGGATGATGATGATGTTTATCACTCAAATATACGCTTCAAATCGTCTCGAAACCAACGGTCGTTTTGTGCGTTGTCTGTGTGTCGCTCTCGTGATTGAAGATAAAAAGTTGCACATCCTTTAAGGTTTACACAGGTTGAGACAGCACTAGGAATGAAGCAGCTGAAGTGAAGTGGGGCAATGTTGTACAGTGGTGGGATATGTTGAGATAGTGTGGTGTCCTTTTAGTGTTCTTCCCAATCCTTTCCCTTTTTTCGAGTACTCATTCTGTCTGGATTCGTTATATCGATCGATTTTGGAGCGCAACGGTTTGCATTACAGAAGTGATATGGATTGGATAGAGTCGACGAGAACGTTTTCATGTCGTTTTTAGTTTTTTTTGTGATTTTGGTCCTATTGTTTTTCCATTGATGAATAGGACTATAGGCTTTTTATGAAGAAGGATAGAGAAGAGTTGTTCTCGCTATAGATTAGCAGCAATAAGGAATACTGTGATGTACTATAAGTTTTCTTATTTAATTAAAACTATATCGTCTTTGTAATTCATCGGGATTTGCAGCAAGAGCCTTCAGGACCTAACTCGGGGCTCCCGTCTCTAACATCGGGAGCTCCTCGAGTGTGGACCTTCTTAAATTACGAGTAGCAGCCGTGGCTCATTGAGTTGGGTTGAGTTGTCAGGTTTTGTTTTTGAACTTTTAATATATTTGGTTTCTTTGTGAACTTTT

mRNA sequence

ATGCGTTGTAATCTGCGTCCTGATATGTCTGACTGCACTCGCATCGACTTAGCTCTGAAAGTGCCGAATGGCATTGGAACACAGCAAGGGTACGAACAATTTGATAAAGTTCTCATGGGACTTCTACGAAGATTATTAGACAACAACAAGAGGGTGCAAGAAGCTGCTTGTTCTGCTTTTGCAACGCTGGAGGAGGAAGCTGCAGAGGAGTTGGCGCCTCATTTGAAAAATATATTACATCACCTAATATGTGCTTTTGGGAAGTATCAGAGACGGAATCTACGGATAGTGTATGATGCTATTGGAACCTTAGCAGATGCTGTTGGAGGGGAGCTGAATCAGGCTTTGGGGACTGGATTTGCCCAATTCGCTCAGCCTGTGTATCAGAGATGCATAAGCATTATTCAGACCCAACAAATGGCAAAGGTCGATCCTGTTTCTGCCGGGGTTCAGTACGATAAAGAGTTCATTGTATGCTGTCTTGATCTTCTTTCAGGACTTGCGGAGGGTCTTGGCAGTGGGATAGAAAGTTTGGTTTCTCAAAGCAACCTGAGGGACTTGCTCCTGCAATGTTGCATGGATGAGGCTTCTGATGTCCGACAGAGTGCCTTTGCATTGCTTGGGGATCTTGGAAGAGTATGCCATGTTCATTTGCAACCACGTTTGTCGGAATTTCTAACCGCTGCAGCGAAGCAACTGGATACTCCTAAGCTGAGGGACATTGTTTCTGTGGCAAACAATGCCTGTTGGGCAATTGGAGAATTAGCTGTTAAGGTACACCAAGACATTTCTCCCGTCGTTATGACCGTGATTTCAAGCTTGGTCCCGATTCTCCAACACGCACAGGAGCTAAATAAATCTCTAGTAGAAAATAGTGCAATTACTCTTGGAAGGATTGCATGGGTTTGCCCTCAGCTAGTGTCACCACATATGGAACATTTCATGCAACCATGGTGCACTGCTTTATCCATGATACGGGATGACGTAGAAAAGGAGGATGCTTTCCGAGGTCTTTGTGCTCTGGCTAAATCAAATCCATCAGGAGCTCTAAGTTCACTTGCTTTCATGTGCAAAGCCATTACGAGTTGGCATGAAATAAGGAGTCAAGATCTTCATAATGAAGTATGCCAAGTTCTGCAAGGCTATAAACAGATGCTGAGAAATGGTGGGTGGGAGCAGTGTATTTCTTCTCTAGAACCATCTGTGAAGGAGAAACTATCAAAATATCAAGTATAGGATGATGATGATGTTTATCACTCAAATATACGCTTCAAATCGTCTCGAAACCAACGGTCGTTTTGTGCGTTGTCTGTGTGTCGCTCTCGTGATTGAAGATAAAAAGTTGCACATCCTTTAAGGTTTACACAGGTTGAGACAGCACTAGGAATGAAGCAGCTGAAGTGAAGTGGGGCAATGTTGTACAGTGGTGGGATATGTTGAGATAGTGTGGTGTCCTTTTAGTGTTCTTCCCAATCCTTTCCCTTTTTTCGAGTACTCATTCTGTCTGGATTCGTTATATCGATCGATTTTGGAGCGCAACGGTTTGCATTACAGAAGTGATATGGATTGGATAGAGTCGACGAGAACGTTTTCATGTCGTTTTTAGTTTTTTTTGTGATTTTGGTCCTATTGTTTTTCCATTGATGAATAGGACTATAGGCTTTTTATGAAGAAGGATAGAGAAGAGTTGTTCTCGCTATAGATTAGCAGCAATAAGGAATACTGTGATGTACTATAAGTTTTCTTATTTAATTAAAACTATATCGTCTTTGTAATTCATCGGGATTTGCAGCAAGAGCCTTCAGGACCTAACTCGGGGCTCCCGTCTCTAACATCGGGAGCTCCTCGAGTGTGGACCTTCTTAAATTACGAGTAGCAGCCGTGGCTCATTGAGTTGGGTTGAGTTGTCAGGTTTTGTTTTTGAACTTTTAATATATTTGGTTTCTTTGTGAACTTTT

Coding sequence (CDS)

ATGCGTTGTAATCTGCGTCCTGATATGTCTGACTGCACTCGCATCGACTTAGCTCTGAAAGTGCCGAATGGCATTGGAACACAGCAAGGGTACGAACAATTTGATAAAGTTCTCATGGGACTTCTACGAAGATTATTAGACAACAACAAGAGGGTGCAAGAAGCTGCTTGTTCTGCTTTTGCAACGCTGGAGGAGGAAGCTGCAGAGGAGTTGGCGCCTCATTTGAAAAATATATTACATCACCTAATATGTGCTTTTGGGAAGTATCAGAGACGGAATCTACGGATAGTGTATGATGCTATTGGAACCTTAGCAGATGCTGTTGGAGGGGAGCTGAATCAGGCTTTGGGGACTGGATTTGCCCAATTCGCTCAGCCTGTGTATCAGAGATGCATAAGCATTATTCAGACCCAACAAATGGCAAAGGTCGATCCTGTTTCTGCCGGGGTTCAGTACGATAAAGAGTTCATTGTATGCTGTCTTGATCTTCTTTCAGGACTTGCGGAGGGTCTTGGCAGTGGGATAGAAAGTTTGGTTTCTCAAAGCAACCTGAGGGACTTGCTCCTGCAATGTTGCATGGATGAGGCTTCTGATGTCCGACAGAGTGCCTTTGCATTGCTTGGGGATCTTGGAAGAGTATGCCATGTTCATTTGCAACCACGTTTGTCGGAATTTCTAACCGCTGCAGCGAAGCAACTGGATACTCCTAAGCTGAGGGACATTGTTTCTGTGGCAAACAATGCCTGTTGGGCAATTGGAGAATTAGCTGTTAAGGTACACCAAGACATTTCTCCCGTCGTTATGACCGTGATTTCAAGCTTGGTCCCGATTCTCCAACACGCACAGGAGCTAAATAAATCTCTAGTAGAAAATAGTGCAATTACTCTTGGAAGGATTGCATGGGTTTGCCCTCAGCTAGTGTCACCACATATGGAACATTTCATGCAACCATGGTGCACTGCTTTATCCATGATACGGGATGACGTAGAAAAGGAGGATGCTTTCCGAGGTCTTTGTGCTCTGGCTAAATCAAATCCATCAGGAGCTCTAAGTTCACTTGCTTTCATGTGCAAAGCCATTACGAGTTGGCATGAAATAAGGAGTCAAGATCTTCATAATGAAGTATGCCAAGTTCTGCAAGGCTATAAACAGATGCTGAGAAATGGTGGGTGGGAGCAGTGTATTTCTTCTCTAGAACCATCTGTGAAGGAGAAACTATCAAAATATCAAGTATAG

Protein sequence

MRCNLRPDMSDCTRIDLALKVPNGIGTQQGYEQFDKVLMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLKNILHHLICAFGKYQRRNLRIVYDAIGTLADAVGGELNQALGTGFAQFAQPVYQRCISIIQTQQMAKVDPVSAGVQYDKEFIVCCLDLLSGLAEGLGSGIESLVSQSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLQPRLSEFLTAAAKQLDTPKLRDIVSVANNACWAIGELAVKVHQDISPVVMTVISSLVPILQHAQELNKSLVENSAITLGRIAWVCPQLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCALAKSNPSGALSSLAFMCKAITSWHEIRSQDLHNEVCQVLQGYKQMLRNGGWEQCISSLEPSVKEKLSKYQV

Homology

[Close]

BLAST of Carg16158 vs. NCBI nr
Match: KAG7010837.1 (Transportin-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 827.4 bits (2136), Expect = 5.4e-236
Identity = 411/411 (100.00%), Postives = 411/411 (100.00%), Query Frame = 0


Query: 1   MRCNLRPDMSDCTRIDLALKVPNGIGTQQGYEQFDKVLMGLLRRLLDNNKRVQEAACSAF 60
           MRCNLRPDMSDCTRIDLALKVPNGIGTQQGYEQFDKVLMGLLRRLLDNNKRVQEAACSAF
Sbjct: 1   MRCNLRPDMSDCTRIDLALKVPNGIGTQQGYEQFDKVLMGLLRRLLDNNKRVQEAACSAF 60

Query: 61  ATLEEEAAEELAPHLKNILHHLICAFGKYQRRNLRIVYDAIGTLADAVGGELNQALGTGF 120
           ATLEEEAAEELAPHLKNILHHLICAFGKYQRRNLRIVYDAIGTLADAVGGELNQALGTGF
Sbjct: 61  ATLEEEAAEELAPHLKNILHHLICAFGKYQRRNLRIVYDAIGTLADAVGGELNQALGTGF 120

Query: 121 AQFAQPVYQRCISIIQTQQMAKVDPVSAGVQYDKEFIVCCLDLLSGLAEGLGSGIESLVS 180
           AQFAQPVYQRCISIIQTQQMAKVDPVSAGVQYDKEFIVCCLDLLSGLAEGLGSGIESLVS
Sbjct: 121 AQFAQPVYQRCISIIQTQQMAKVDPVSAGVQYDKEFIVCCLDLLSGLAEGLGSGIESLVS 180

Query: 181 QSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLQPRLSEFLTAAAKQLDTPKLRD 240
           QSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLQPRLSEFLTAAAKQLDTPKLRD
Sbjct: 181 QSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLQPRLSEFLTAAAKQLDTPKLRD 240

Query: 241 IVSVANNACWAIGELAVKVHQDISPVVMTVISSLVPILQHAQELNKSLVENSAITLGRIA 300
           IVSVANNACWAIGELAVKVHQDISPVVMTVISSLVPILQHAQELNKSLVENSAITLGRIA
Sbjct: 241 IVSVANNACWAIGELAVKVHQDISPVVMTVISSLVPILQHAQELNKSLVENSAITLGRIA 300

Query: 301 WVCPQLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCALAKSNPSGALSSLAFMCKAI 360
           WVCPQLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCALAKSNPSGALSSLAFMCKAI
Sbjct: 301 WVCPQLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCALAKSNPSGALSSLAFMCKAI 360

Query: 361 TSWHEIRSQDLHNEVCQVLQGYKQMLRNGGWEQCISSLEPSVKEKLSKYQV 412
           TSWHEIRSQDLHNEVCQVLQGYKQMLRNGGWEQCISSLEPSVKEKLSKYQV
Sbjct: 361 TSWHEIRSQDLHNEVCQVLQGYKQMLRNGGWEQCISSLEPSVKEKLSKYQV 411

[Close]

BLAST of Carg16158 vs. NCBI nr
Match: XP_022944437.1 (transportin-1-like [Cucurbita moschata])

HSP 1 Score: 758.1 bits (1956), Expect = 4.0e-215
Identity = 386/428 (90.19%), Postives = 388/428 (90.65%), Query Frame = 0


Query: 21  VPNGIGTQQGYEQFDKVLMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLKNILH 80
           +  GIGTQQGYEQFDKVLMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLKNILH
Sbjct: 464 IVQGIGTQQGYEQFDKVLMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLKNILH 523

Query: 81  HLICAFGKYQRRNLRIVYDAIGTLADAVGGELN--------------------------- 140
           HLICAFGKYQRRNLRIVYDAIGTLADAVGGELN                           
Sbjct: 524 HLICAFGKYQRRNLRIVYDAIGTLADAVGGELNQPVYLDILMPPLIAKWQQLSNSDKDLF 583

Query: 141 ----------QALGTGFAQFAQPVYQRCISIIQTQQMAKVDPVSAGVQYDKEFIVCCLDL 200
                     QALGTGFAQFAQPVYQRCISI+QTQQMAKVDPVSAGVQYDKEFIVCCLDL
Sbjct: 584 PLLECFTSIAQALGTGFAQFAQPVYQRCISIVQTQQMAKVDPVSAGVQYDKEFIVCCLDL 643

Query: 201 LSGLAEGLGSGIESLVSQSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLQPRLS 260
           LSGLAEGLGSGIESLVSQSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLQPRLS
Sbjct: 644 LSGLAEGLGSGIESLVSQSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLQPRLS 703

Query: 261 EFLTAAAKQLDTPKLRDIVSVANNACWAIGELAVKVHQDISPVVMTVISSLVPILQHAQE 320
           EFLTAAAKQLDTPKLRDIVSVANNACWAIGELAVKVHQDISPVVMTVISSLVPILQHAQE
Sbjct: 704 EFLTAAAKQLDTPKLRDIVSVANNACWAIGELAVKVHQDISPVVMTVISSLVPILQHAQE 763

Query: 321 LNKSLVENSAITLGRIAWVCPQLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCALAK 380
           LNKSLVENSAITLGRIAWVCPQLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCALAK
Sbjct: 764 LNKSLVENSAITLGRIAWVCPQLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCALAK 823

Query: 381 SNPSGALSSLAFMCKAITSWHEIRSQDLHNEVCQVLQGYKQMLRNGGWEQCISSLEPSVK 412
           SNPSGALSSLAFMCKAI SWHEIRSQDLHNEVCQVLQGYKQMLRNGGWEQCISSLEPSVK
Sbjct: 824 SNPSGALSSLAFMCKAIASWHEIRSQDLHNEVCQVLQGYKQMLRNGGWEQCISSLEPSVK 883

[Close]

BLAST of Carg16158 vs. NCBI nr
Match: KAG6571007.1 (Transportin-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 757.3 bits (1954), Expect = 6.9e-215
Identity = 386/428 (90.19%), Postives = 388/428 (90.65%), Query Frame = 0


Query: 21  VPNGIGTQQGYEQFDKVLMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLKNILH 80
           +  GIGTQQGYEQFDKVLMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLKNILH
Sbjct: 464 IVQGIGTQQGYEQFDKVLMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLKNILH 523

Query: 81  HLICAFGKYQRRNLRIVYDAIGTLADAVGGELN--------------------------- 140
           HLICAFGKYQRRNLRIVYDAIGTLADAVGGELN                           
Sbjct: 524 HLICAFGKYQRRNLRIVYDAIGTLADAVGGELNQPVYLDILMPPLIAKWQQLSNSDKDLF 583

Query: 141 ----------QALGTGFAQFAQPVYQRCISIIQTQQMAKVDPVSAGVQYDKEFIVCCLDL 200
                     QALGTGFAQFAQPVYQRCISIIQTQQMAKVDPVSAGVQYDKEFIVCCLDL
Sbjct: 584 PLLECFTSIAQALGTGFAQFAQPVYQRCISIIQTQQMAKVDPVSAGVQYDKEFIVCCLDL 643

Query: 201 LSGLAEGLGSGIESLVSQSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLQPRLS 260
           LSGLAEGLGSGIESLVSQSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLQPRLS
Sbjct: 644 LSGLAEGLGSGIESLVSQSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLQPRLS 703

Query: 261 EFLTAAAKQLDTPKLRDIVSVANNACWAIGELAVKVHQDISPVVMTVISSLVPILQHAQE 320
           EFLTAAAKQLDTPKLRDIVSVANNACWAIGELAVKVHQDISPVVMTVISSLVPILQHAQE
Sbjct: 704 EFLTAAAKQLDTPKLRDIVSVANNACWAIGELAVKVHQDISPVVMTVISSLVPILQHAQE 763

Query: 321 LNKSLVENSAITLGRIAWVCPQLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCALAK 380
           LNKSLVENSAITLGRIAWVCPQLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCALAK
Sbjct: 764 LNKSLVENSAITLGRIAWVCPQLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCALAK 823

Query: 381 SNPSGALSSLAFMCKAITSWHEIRSQDLHNEVCQVLQGYKQMLRNGGWEQCISSLEPSVK 412
           SNPSGALSSLAFMCKAI SWHEIRSQDLHNEVCQVLQGYKQMLRNGGWEQCISSLEPSVK
Sbjct: 824 SNPSGALSSLAFMCKAIASWHEIRSQDLHNEVCQVLQGYKQMLRNGGWEQCISSLEPSVK 883

[Close]

BLAST of Carg16158 vs. NCBI nr
Match: XP_023512722.1 (transportin-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 753.8 bits (1945), Expect = 7.6e-214
Identity = 384/428 (89.72%), Postives = 387/428 (90.42%), Query Frame = 0


Query: 21  VPNGIGTQQGYEQFDKVLMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLKNILH 80
           +  GIGTQQGYEQFDKVLMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLKNILH
Sbjct: 464 IVQGIGTQQGYEQFDKVLMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLKNILH 523

Query: 81  HLICAFGKYQRRNLRIVYDAIGTLADAVGGELN--------------------------- 140
           HLICAFGKYQRRNLRIVYDAIGTLADAVG ELN                           
Sbjct: 524 HLICAFGKYQRRNLRIVYDAIGTLADAVGAELNQPVYLDILMPPLIAKWQQLSNSDKDLF 583

Query: 141 ----------QALGTGFAQFAQPVYQRCISIIQTQQMAKVDPVSAGVQYDKEFIVCCLDL 200
                     QALGTGFAQFAQPVYQRCISIIQTQQMAKVDPVSAGVQYDKEFIVCCLDL
Sbjct: 584 PLLECFTSIAQALGTGFAQFAQPVYQRCISIIQTQQMAKVDPVSAGVQYDKEFIVCCLDL 643

Query: 201 LSGLAEGLGSGIESLVSQSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLQPRLS 260
           LSGLAEGLGSGIESLVSQSNLRDLLLQCC+DEASDVRQSAFALLGDLGRVCHVHLQPRLS
Sbjct: 644 LSGLAEGLGSGIESLVSQSNLRDLLLQCCLDEASDVRQSAFALLGDLGRVCHVHLQPRLS 703

Query: 261 EFLTAAAKQLDTPKLRDIVSVANNACWAIGELAVKVHQDISPVVMTVISSLVPILQHAQE 320
           EFLTAAAKQLDTPKLRDIVSVANNACWAIGELAVKVHQDISPVV+TVISSLVPILQHAQE
Sbjct: 704 EFLTAAAKQLDTPKLRDIVSVANNACWAIGELAVKVHQDISPVVLTVISSLVPILQHAQE 763

Query: 321 LNKSLVENSAITLGRIAWVCPQLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCALAK 380
           LNKSLVENSAITLGRIAWVCPQLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCALAK
Sbjct: 764 LNKSLVENSAITLGRIAWVCPQLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCALAK 823

Query: 381 SNPSGALSSLAFMCKAITSWHEIRSQDLHNEVCQVLQGYKQMLRNGGWEQCISSLEPSVK 412
           SNPSGALSSLAFMCKAI SWHEIRSQDLHNEVCQVLQGYKQMLRNGGWEQCISSLEPSVK
Sbjct: 824 SNPSGALSSLAFMCKAIASWHEIRSQDLHNEVCQVLQGYKQMLRNGGWEQCISSLEPSVK 883

[Close]

BLAST of Carg16158 vs. NCBI nr
Match: XP_022985794.1 (transportin-1-like [Cucurbita maxima])

HSP 1 Score: 750.7 bits (1937), Expect = 6.5e-213
Identity = 384/428 (89.72%), Postives = 385/428 (89.95%), Query Frame = 0


Query: 21  VPNGIGTQQGYEQFDKVLMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLKNILH 80
           +  GIGTQQGYEQFDKVLMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLKNIL 
Sbjct: 464 IVQGIGTQQGYEQFDKVLMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLKNILQ 523

Query: 81  HLICAFGKYQRRNLRIVYDAIGTLADAVGGELN--------------------------- 140
           HLICAFGKYQRRNLRIVYDAIGTLADAVGGELN                           
Sbjct: 524 HLICAFGKYQRRNLRIVYDAIGTLADAVGGELNQPIYLDILMPPLIAKWQQLSNSDKDLF 583

Query: 141 ----------QALGTGFAQFAQPVYQRCISIIQTQQMAKVDPVSAGVQYDKEFIVCCLDL 200
                     QALGTGFAQFAQPVYQRCISIIQTQQMAKVDPVSAGVQYDKEFIVCCLDL
Sbjct: 584 PLLECFTSIAQALGTGFAQFAQPVYQRCISIIQTQQMAKVDPVSAGVQYDKEFIVCCLDL 643

Query: 201 LSGLAEGLGSGIESLVSQSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLQPRLS 260
           LSGLAEGLGSGIESLVSQSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLQPRLS
Sbjct: 644 LSGLAEGLGSGIESLVSQSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLQPRLS 703

Query: 261 EFLTAAAKQLDTPKLRDIVSVANNACWAIGELAVKVHQDISPVVMTVISSLVPILQHAQE 320
           EFLTAA KQLDTPKLRDIVSVANNACWAIGELAVKVHQDIS VVMTVISSLVPILQHAQE
Sbjct: 704 EFLTAAVKQLDTPKLRDIVSVANNACWAIGELAVKVHQDISSVVMTVISSLVPILQHAQE 763

Query: 321 LNKSLVENSAITLGRIAWVCPQLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCALAK 380
           LNKSLVENSAITLGRIAWVCPQLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCALAK
Sbjct: 764 LNKSLVENSAITLGRIAWVCPQLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCALAK 823

Query: 381 SNPSGALSSLAFMCKAITSWHEIRSQDLHNEVCQVLQGYKQMLRNGGWEQCISSLEPSVK 412
           SNPSGALSSLAFMCKAI SWHEIRSQDLHNEVCQVLQGYKQMLRNGGWEQCISSLEPSVK
Sbjct: 824 SNPSGALSSLAFMCKAIASWHEIRSQDLHNEVCQVLQGYKQMLRNGGWEQCISSLEPSVK 883

[Close]

BLAST of Carg16158 vs. ExPASy Swiss-Prot
Match: B8ARW2 (Transportin-1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_18044 PE=2 SV=1)

HSP 1 Score: 573.2 bits (1476), Expect = 2.4e-162
Identity = 280/419 (66.83%), Postives = 334/419 (79.71%), Query Frame = 0


Query: 30  GYEQFDKVLMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLKNILHHLICAFGKY 89
           G EQFDK+L+GLLRR+LD NKRVQEAACSAFATLEEEAAEEL PHL  IL HL+CA+GKY
Sbjct: 472 GREQFDKILLGLLRRVLDTNKRVQEAACSAFATLEEEAAEELVPHLGIILQHLMCAYGKY 531

Query: 90  QRRNLRIVYDAIGTLADAVGGELN------------------------------------ 149
           QRRNLRI+YDA+GTLADAVG ELN                                    
Sbjct: 532 QRRNLRILYDALGTLADAVGAELNQAKYLDIFMPPLITKWQQLANSDKDLFPLLECFTSI 591

Query: 150 -QALGTGFAQFAQPVYQRCISIIQTQQMAKVDPVSAGVQYDKEFIVCCLDLLSGLAEGLG 209
            QALG GF+QFA+PV+QRCI++IQ+Q +AKVDP +AG  YDKEFIVC LDLLSGLAEGLG
Sbjct: 592 AQALGPGFSQFAEPVFQRCINLIQSQHLAKVDPAAAGALYDKEFIVCALDLLSGLAEGLG 651

Query: 210 SGIESLVSQSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLQPRLSEFLTAAAKQ 269
           +GIESLVSQS+LRD+LLQCCMDEA+DVRQSA ALLGDL RVC +HL PRL EFL  AAKQ
Sbjct: 652 AGIESLVSQSSLRDILLQCCMDEAADVRQSALALLGDLSRVCPIHLHPRLQEFLNVAAKQ 711

Query: 270 LDTPKLRDIVSVANNACWAIGELAVKVHQDISPVVMTVISSLVPILQHAQELNKSLVENS 329
           L+   +++ VSVANNACWAIGELA+K+ ++ISPVV+TV+S LVPIL+  + LNKSL+ENS
Sbjct: 712 LNPQCVKEAVSVANNACWAIGELAIKIGKEISPVVITVVSCLVPILKSPEGLNKSLLENS 771

Query: 330 AITLGRIAWVCPQLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCALAKSNPSGALSS 389
           AITLGR+ WVCP +V+PHM+HFMQ WC AL MIRDD EKEDAF GLCA+  +NP+GA+ S
Sbjct: 772 AITLGRLCWVCPDIVAPHMDHFMQAWCNALCMIRDDFEKEDAFHGLCAMVAANPTGAVGS 831

Query: 390 LAFMCKAITSWHEIRSQDLHNEVCQVLQGYKQMLRNGGWEQCISSLEPSVKEKLSKYQV 412
           L F+C+A  SW+EI+S+ LHNEVCQ+L GYKQML +GGWEQC+S+LEP+V ++L +Y V
Sbjct: 832 LTFICQACASWNEIKSEGLHNEVCQILNGYKQMLGSGGWEQCMSTLEPAVVQRLGRYGV 890

[Close]

BLAST of Carg16158 vs. ExPASy Swiss-Prot
Match: B9FDR3 (Transportin-1 OS=Oryza sativa subsp. japonica OX=39947 GN=TRN1 PE=3 SV=2)

HSP 1 Score: 573.2 bits (1476), Expect = 2.4e-162
Identity = 280/419 (66.83%), Postives = 334/419 (79.71%), Query Frame = 0


Query: 30  GYEQFDKVLMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLKNILHHLICAFGKY 89
           G EQFDK+L+GLLRR+LD NKRVQEAACSAFATLEEEAAEEL PHL  IL HL+CA+GKY
Sbjct: 473 GREQFDKILLGLLRRVLDTNKRVQEAACSAFATLEEEAAEELVPHLGIILQHLMCAYGKY 532

Query: 90  QRRNLRIVYDAIGTLADAVGGELN------------------------------------ 149
           QRRNLRI+YDA+GTLADAVG ELN                                    
Sbjct: 533 QRRNLRILYDALGTLADAVGAELNQAKYLDIFMPPLITKWQQLANSDKDLFPLLECFTSI 592

Query: 150 -QALGTGFAQFAQPVYQRCISIIQTQQMAKVDPVSAGVQYDKEFIVCCLDLLSGLAEGLG 209
            QALG GF+QFA+PV+QRCI++IQ+Q +AKVDP +AG  YDKEFIVC LDLLSGLAEGLG
Sbjct: 593 AQALGPGFSQFAEPVFQRCINLIQSQHLAKVDPAAAGALYDKEFIVCALDLLSGLAEGLG 652

Query: 210 SGIESLVSQSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLQPRLSEFLTAAAKQ 269
           +GIESLVSQS+LRD+LLQCCMDEA+DVRQSA ALLGDL RVC +HL PRL EFL  AAKQ
Sbjct: 653 AGIESLVSQSSLRDILLQCCMDEAADVRQSALALLGDLSRVCPIHLHPRLQEFLNVAAKQ 712

Query: 270 LDTPKLRDIVSVANNACWAIGELAVKVHQDISPVVMTVISSLVPILQHAQELNKSLVENS 329
           L+   +++ VSVANNACWAIGELA+K+ ++ISPVV+TV+S LVPIL+  + LNKSL+ENS
Sbjct: 713 LNPQCVKEAVSVANNACWAIGELAIKIGKEISPVVITVVSCLVPILKSPEGLNKSLLENS 772

Query: 330 AITLGRIAWVCPQLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCALAKSNPSGALSS 389
           AITLGR+ WVCP +V+PHM+HFMQ WC AL MIRDD EKEDAF GLCA+  +NP+GA+ S
Sbjct: 773 AITLGRLCWVCPDIVAPHMDHFMQAWCNALCMIRDDFEKEDAFHGLCAMVAANPTGAVGS 832

Query: 390 LAFMCKAITSWHEIRSQDLHNEVCQVLQGYKQMLRNGGWEQCISSLEPSVKEKLSKYQV 412
           L F+C+A  SW+EI+S+ LHNEVCQ+L GYKQML +GGWEQC+S+LEP+V ++L +Y V
Sbjct: 833 LTFICQACASWNEIKSEGLHNEVCQILNGYKQMLGSGGWEQCMSTLEPAVVQRLGRYGV 891

[Close]

BLAST of Carg16158 vs. ExPASy Swiss-Prot
Match: Q8H0U4 (Transportin-1 OS=Arabidopsis thaliana OX=3702 GN=TRN1 PE=1 SV=1)

HSP 1 Score: 561.2 bits (1445), Expect = 9.5e-159
Identity = 284/423 (67.14%), Postives = 331/423 (78.25%), Query Frame = 0


Query: 26  GTQQGYEQFDKVLMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLKNILHHLICA 85
           G  +GYEQF+KVLMGLLRRLLD NKRVQEAACSAFAT+EE+AAEEL PHL  IL HL+CA
Sbjct: 470 GNPKGYEQFEKVLMGLLRRLLDTNKRVQEAACSAFATVEEDAAEELVPHLGVILQHLMCA 529

Query: 86  FGKYQRRNLRIVYDAIGTLADAVGGELN-------------------------------- 145
           FGKYQRRNLRIVYDAIGTLAD+V  ELN                                
Sbjct: 530 FGKYQRRNLRIVYDAIGTLADSVREELNKPAYLEILMPPLVAKWQQLSNSDKDLFPLLEC 589

Query: 146 -----QALGTGFAQFAQPVYQRCISIIQTQQMAKVDPVSAGVQYDKEFIVCCLDLLSGLA 205
                QALG GFA FAQPV+QRC+ IIQ QQ+AKV+P SAG QYD+EFIVC LDLLSGLA
Sbjct: 590 FTSISQALGVGFAPFAQPVFQRCMDIIQLQQLAKVNPASAGAQYDREFIVCSLDLLSGLA 649

Query: 206 EGLGSGIESLVSQSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLQPRLSEFLTA 265
           EGLGSGIESLV QSNLRDLLL CC+DEA+DVRQSAFAL+GDL RV  V+LQPRL +FL  
Sbjct: 650 EGLGSGIESLVQQSNLRDLLLNCCIDEAADVRQSAFALMGDLARVFPVYLQPRLLDFLEI 709

Query: 266 AAKQLDTPKLRDIVSVANNACWAIGELAVKVHQDISPVVMTVISSLVPILQHAQELNKSL 325
           A++QL     R+ +SVANNACWAIGELAVKV Q++SP+V  V+SSL  ILQH + +NK+L
Sbjct: 710 ASQQLSANLNRENLSVANNACWAIGELAVKVRQEVSPIVAKVVSSLGLILQHGEGVNKAL 769

Query: 326 VENSAITLGRIAWVCPQLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCALAKSNPSG 385
           VENSAITLGR+AW+ P LV+PHM+HFM+PWC ALSM+RDD+EKEDAFRGLCA+ K NPSG
Sbjct: 770 VENSAITLGRLAWIRPDLVAPHMDHFMKPWCMALSMVRDDIEKEDAFRGLCAVVKVNPSG 829

Query: 386 ALSSLAFMCKAITSWHEIRSQDLHNEVCQVLQGYKQMLRNGGWEQCISSLEPSVKEKLSK 412
            +SSL F+C+AI SWHEIRS+D+  EV QVL GYK ML N  W +C+S+L+P VKE+L++
Sbjct: 830 GVSSLVFICQAIASWHEIRSEDVQTEVSQVLNGYKHMLGN-SWAECLSALDPPVKERLAR 889

[Close]

BLAST of Carg16158 vs. ExPASy Swiss-Prot
Match: Q99LG2 (Transportin-2 OS=Mus musculus OX=10090 GN=Tnpo2 PE=1 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 9.4e-90
Identity = 175/409 (42.79%), Postives = 249/409 (60.88%), Query Frame = 0


Query: 41  LLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLKNILHHLICAFGKYQRRNLRIVYDA 100
           LL+R+LD NKRVQEAACSAFATLEEEA  EL P+L  IL  L+ AFGKYQ +NL I+YDA
Sbjct: 482 LLKRILDGNKRVQEAACSAFATLEEEACTELVPYLSYILDTLVFAFGKYQHKNLLILYDA 541

Query: 101 IGTLADAVGGELNQ-------------------------------------ALGTGFAQF 160
           IGTLAD+VG  LNQ                                     AL +GF  +
Sbjct: 542 IGTLADSVGHHLNQPEYIQKLMPPLIQKWNELKDEDKDLFPLLECLSSVATALQSGFLPY 601

Query: 161 AQPVYQRCISIIQTQQMAKVDPVSAGVQY---DKEFIVCCLDLLSGLAEGLGSGIESLVS 220
            +PVYQRC++++Q      +       QY   DK+F++  LDLLSGLAEGLG  +E LV+
Sbjct: 602 CEPVYQRCVTLVQKTLAQAMMYTQHPEQYEAPDKDFMIVALDLLSGLAEGLGGHVEQLVA 661

Query: 221 QSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLQPRLSEFLTAAAKQLDTPKLRD 280
           +SN+  LL QC  D   +VRQS+FALLGDL + C +H++P ++EF+      L+     +
Sbjct: 662 RSNIMTLLFQCMQDSMPEVRQSSFALLGDLTKACFIHVKPCIAEFMPILGTNLNP----E 721

Query: 281 IVSVANNACWAIGELAVKVHQDISPVVMTVISSLVPILQHAQELNKSLVENSAITLGRIA 340
            +SV NNA WAIGE+ +++  ++ P V  V+++LV I+ +     K+L+EN+AIT+GR+ 
Sbjct: 722 FISVCNNATWAIGEICMQMGAEMQPYVQMVLNNLVEII-NRPNTPKTLLENTAITIGRLG 781

Query: 341 WVCPQLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCALAKSNPSGALSSLAFMCKAI 400
           +VCPQ V+P ++ F++PWCT+L  IRD+ EK+ AFRG+C +   NP G +    F C A+
Sbjct: 782 YVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICMMIGVNPGGVVQDFIFFCDAV 841

Query: 401 TSWHEIRSQDLHNEVCQVLQGYKQMLRNGGWEQCISSLEPSVKEKLSKY 410
            SW   +  DL +   ++L G+K  +    W+Q      P +KE+L+ +
Sbjct: 842 ASWVSPK-DDLRDMFYKILHGFKDQVGEENWQQFSEQFPPLLKERLAAF 884

[Close]

BLAST of Carg16158 vs. ExPASy Swiss-Prot
Match: Q8BFY9 (Transportin-1 OS=Mus musculus OX=10090 GN=Tnpo1 PE=1 SV=2)

HSP 1 Score: 324.7 bits (831), Expect = 1.5e-87
Identity = 171/409 (41.81%), Postives = 250/409 (61.12%), Query Frame = 0


Query: 41  LLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLKNILHHLICAFGKYQRRNLRIVYDA 100
           LL+R+LD+NKRVQEAACSAFATLEEEA  EL P+L  IL  L+ AF KYQ +NL I+YDA
Sbjct: 493 LLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLILYDA 552

Query: 101 IGTLADAVGGELNQ-------------------------------------ALGTGFAQF 160
           IGTLAD+VG  LN+                                     AL +GF  +
Sbjct: 553 IGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLPY 612

Query: 161 AQPVYQRCISIIQTQQMAKVDPVSAGVQY---DKEFIVCCLDLLSGLAEGLGSGIESLVS 220
            +PVYQRC++++Q      +   +   QY   DK+F++  LDLLSGLAEGLG  IE LV+
Sbjct: 613 CEPVYQRCVNLVQKTLAQAMLNNAQPEQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVA 672

Query: 221 QSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLQPRLSEFLTAAAKQLDTPKLRD 280
           +SN+  L+ QC  D+  +VRQS+FALLGDL + C  H++P +++F+      L+     +
Sbjct: 673 RSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNP----E 732

Query: 281 IVSVANNACWAIGELAVKVHQDISPVVMTVISSLVPILQHAQELNKSLVENSAITLGRIA 340
            +SV NNA WAIGE+++++  ++ P +  V+  LV I+ +     K+L+EN+AIT+GR+ 
Sbjct: 733 FISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEII-NRPNTPKTLLENTAITIGRLG 792

Query: 341 WVCPQLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCALAKSNPSGALSSLAFMCKAI 400
           +VCPQ V+P ++ F++PWCT+L  IRD+ EK+ AFRG+C +   NPSG +    F C A+
Sbjct: 793 YVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSGVIQDFIFFCDAV 852

Query: 401 TSWHEIRSQDLHNEVCQVLQGYKQMLRNGGWEQCISSLEPSVKEKLSKY 410
            SW   +  DL +  C++L G+K  + +  W +        +KE+L+ +
Sbjct: 853 ASWINPK-DDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAF 895

[Close]

BLAST of Carg16158 vs. ExPASy TrEMBL
Match: A0A6J1FVN4 (transportin-1-like OS=Cucurbita moschata OX=3662 GN=LOC111448889 PE=4 SV=1)

HSP 1 Score: 758.1 bits (1956), Expect = 2.0e-215
Identity = 386/428 (90.19%), Postives = 388/428 (90.65%), Query Frame = 0


Query: 21  VPNGIGTQQGYEQFDKVLMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLKNILH 80
           +  GIGTQQGYEQFDKVLMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLKNILH
Sbjct: 464 IVQGIGTQQGYEQFDKVLMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLKNILH 523

Query: 81  HLICAFGKYQRRNLRIVYDAIGTLADAVGGELN--------------------------- 140
           HLICAFGKYQRRNLRIVYDAIGTLADAVGGELN                           
Sbjct: 524 HLICAFGKYQRRNLRIVYDAIGTLADAVGGELNQPVYLDILMPPLIAKWQQLSNSDKDLF 583

Query: 141 ----------QALGTGFAQFAQPVYQRCISIIQTQQMAKVDPVSAGVQYDKEFIVCCLDL 200
                     QALGTGFAQFAQPVYQRCISI+QTQQMAKVDPVSAGVQYDKEFIVCCLDL
Sbjct: 584 PLLECFTSIAQALGTGFAQFAQPVYQRCISIVQTQQMAKVDPVSAGVQYDKEFIVCCLDL 643

Query: 201 LSGLAEGLGSGIESLVSQSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLQPRLS 260
           LSGLAEGLGSGIESLVSQSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLQPRLS
Sbjct: 644 LSGLAEGLGSGIESLVSQSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLQPRLS 703

Query: 261 EFLTAAAKQLDTPKLRDIVSVANNACWAIGELAVKVHQDISPVVMTVISSLVPILQHAQE 320
           EFLTAAAKQLDTPKLRDIVSVANNACWAIGELAVKVHQDISPVVMTVISSLVPILQHAQE
Sbjct: 704 EFLTAAAKQLDTPKLRDIVSVANNACWAIGELAVKVHQDISPVVMTVISSLVPILQHAQE 763

Query: 321 LNKSLVENSAITLGRIAWVCPQLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCALAK 380
           LNKSLVENSAITLGRIAWVCPQLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCALAK
Sbjct: 764 LNKSLVENSAITLGRIAWVCPQLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCALAK 823

Query: 381 SNPSGALSSLAFMCKAITSWHEIRSQDLHNEVCQVLQGYKQMLRNGGWEQCISSLEPSVK 412
           SNPSGALSSLAFMCKAI SWHEIRSQDLHNEVCQVLQGYKQMLRNGGWEQCISSLEPSVK
Sbjct: 824 SNPSGALSSLAFMCKAIASWHEIRSQDLHNEVCQVLQGYKQMLRNGGWEQCISSLEPSVK 883

[Close]

BLAST of Carg16158 vs. ExPASy TrEMBL
Match: A0A6J1JE95 (transportin-1-like OS=Cucurbita maxima OX=3661 GN=LOC111483737 PE=4 SV=1)

HSP 1 Score: 750.7 bits (1937), Expect = 3.1e-213
Identity = 384/428 (89.72%), Postives = 385/428 (89.95%), Query Frame = 0


Query: 21  VPNGIGTQQGYEQFDKVLMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLKNILH 80
           +  GIGTQQGYEQFDKVLMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLKNIL 
Sbjct: 464 IVQGIGTQQGYEQFDKVLMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLKNILQ 523

Query: 81  HLICAFGKYQRRNLRIVYDAIGTLADAVGGELN--------------------------- 140
           HLICAFGKYQRRNLRIVYDAIGTLADAVGGELN                           
Sbjct: 524 HLICAFGKYQRRNLRIVYDAIGTLADAVGGELNQPIYLDILMPPLIAKWQQLSNSDKDLF 583

Query: 141 ----------QALGTGFAQFAQPVYQRCISIIQTQQMAKVDPVSAGVQYDKEFIVCCLDL 200
                     QALGTGFAQFAQPVYQRCISIIQTQQMAKVDPVSAGVQYDKEFIVCCLDL
Sbjct: 584 PLLECFTSIAQALGTGFAQFAQPVYQRCISIIQTQQMAKVDPVSAGVQYDKEFIVCCLDL 643

Query: 201 LSGLAEGLGSGIESLVSQSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLQPRLS 260
           LSGLAEGLGSGIESLVSQSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLQPRLS
Sbjct: 644 LSGLAEGLGSGIESLVSQSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLQPRLS 703

Query: 261 EFLTAAAKQLDTPKLRDIVSVANNACWAIGELAVKVHQDISPVVMTVISSLVPILQHAQE 320
           EFLTAA KQLDTPKLRDIVSVANNACWAIGELAVKVHQDIS VVMTVISSLVPILQHAQE
Sbjct: 704 EFLTAAVKQLDTPKLRDIVSVANNACWAIGELAVKVHQDISSVVMTVISSLVPILQHAQE 763

Query: 321 LNKSLVENSAITLGRIAWVCPQLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCALAK 380
           LNKSLVENSAITLGRIAWVCPQLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCALAK
Sbjct: 764 LNKSLVENSAITLGRIAWVCPQLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCALAK 823

Query: 381 SNPSGALSSLAFMCKAITSWHEIRSQDLHNEVCQVLQGYKQMLRNGGWEQCISSLEPSVK 412
           SNPSGALSSLAFMCKAI SWHEIRSQDLHNEVCQVLQGYKQMLRNGGWEQCISSLEPSVK
Sbjct: 824 SNPSGALSSLAFMCKAIASWHEIRSQDLHNEVCQVLQGYKQMLRNGGWEQCISSLEPSVK 883

[Close]

BLAST of Carg16158 vs. ExPASy TrEMBL
Match: A0A6J1CFY8 (transportin-1 OS=Momordica charantia OX=3673 GN=LOC111011078 PE=4 SV=1)

HSP 1 Score: 726.5 bits (1874), Expect = 6.3e-206
Identity = 370/428 (86.45%), Postives = 379/428 (88.55%), Query Frame = 0


Query: 21  VPNGIGTQQGYEQFDKVLMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLKNILH 80
           +  GIG Q+GYEQFDKVLMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHL+NIL 
Sbjct: 464 IVQGIGNQKGYEQFDKVLMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLENILQ 523

Query: 81  HLICAFGKYQRRNLRIVYDAIGTLADAVGGELN--------------------------- 140
           HLICAFGKYQRRNLRIVYDAIGTLADAVGGELN                           
Sbjct: 524 HLICAFGKYQRRNLRIVYDAIGTLADAVGGELNQPAYLDILMPPLITKWQQLSNSDKDLF 583

Query: 141 ----------QALGTGFAQFAQPVYQRCISIIQTQQMAKVDPVSAGVQYDKEFIVCCLDL 200
                     QALGTGFAQFAQPVYQRCISIIQTQQMAKVDPVSAGVQYDKEFIVCCLDL
Sbjct: 584 PLLECFTSIAQALGTGFAQFAQPVYQRCISIIQTQQMAKVDPVSAGVQYDKEFIVCCLDL 643

Query: 201 LSGLAEGLGSGIESLVSQSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLQPRLS 260
           LSGLAEGLGSGIESLVSQSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLQPRLS
Sbjct: 644 LSGLAEGLGSGIESLVSQSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLQPRLS 703

Query: 261 EFLTAAAKQLDTPKLRDIVSVANNACWAIGELAVKVHQDISPVVMTVISSLVPILQHAQE 320
           EFLTAAAKQLDTPKL++ VSVANNACWAIGELAVKVHQ+ISPVVMTVISSLVPILQHA+E
Sbjct: 704 EFLTAAAKQLDTPKLKETVSVANNACWAIGELAVKVHQEISPVVMTVISSLVPILQHAKE 763

Query: 321 LNKSLVENSAITLGRIAWVCPQLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCALAK 380
           LNKSLVENSAITLGRIAWVCPQ VSPHMEHFMQPWCTALSMI DDVEKEDAFRGLCALAK
Sbjct: 764 LNKSLVENSAITLGRIAWVCPQQVSPHMEHFMQPWCTALSMIHDDVEKEDAFRGLCALAK 823

Query: 381 SNPSGALSSLAFMCKAITSWHEIRSQDLHNEVCQVLQGYKQMLRNGGWEQCISSLEPSVK 412
           SNPSGALSSLA MCKAI SWHEIRSQDLHNEVC VLQGYKQMLRNGGW+QCISSLEP VK
Sbjct: 824 SNPSGALSSLAHMCKAIASWHEIRSQDLHNEVCLVLQGYKQMLRNGGWDQCISSLEPYVK 883

[Close]

BLAST of Carg16158 vs. ExPASy TrEMBL
Match: A0A1S3C7H5 (transportin-1 OS=Cucumis melo OX=3656 GN=LOC103497352 PE=4 SV=1)

HSP 1 Score: 723.0 bits (1865), Expect = 7.0e-205
Identity = 366/428 (85.51%), Postives = 381/428 (89.02%), Query Frame = 0


Query: 21  VPNGIGTQQGYEQFDKVLMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLKNILH 80
           +  GIGTQ+GYEQFDKVLMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLKNIL 
Sbjct: 466 IVQGIGTQKGYEQFDKVLMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLKNILQ 525

Query: 81  HLICAFGKYQRRNLRIVYDAIGTLADAVGGELN--------------------------- 140
           HLICAFGKYQRRNLRIVYDAIGTLADAVGGELN                           
Sbjct: 526 HLICAFGKYQRRNLRIVYDAIGTLADAVGGELNQPVYLDILMPPLIAKWQQLSNSDKDLF 585

Query: 141 ----------QALGTGFAQFAQPVYQRCISIIQTQQMAKVDPVSAGVQYDKEFIVCCLDL 200
                     QALGTGFAQFA PVYQRCI+IIQTQQMAKV+PVSAGVQYD+EFIVCCLDL
Sbjct: 586 PLLECFTSIAQALGTGFAQFAPPVYQRCINIIQTQQMAKVEPVSAGVQYDREFIVCCLDL 645

Query: 201 LSGLAEGLGSGIESLVSQSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLQPRLS 260
           LSGLAEGLGSGIESLVSQSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLQPRLS
Sbjct: 646 LSGLAEGLGSGIESLVSQSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLQPRLS 705

Query: 261 EFLTAAAKQLDTPKLRDIVSVANNACWAIGELAVKVHQDISPVVMTVISSLVPILQHAQE 320
           EFLTAAAKQLDTPKL++IVSVANNACWAIGELAVKV Q+ISPVVMTVISSLVPILQHAQE
Sbjct: 706 EFLTAAAKQLDTPKLKEIVSVANNACWAIGELAVKVRQEISPVVMTVISSLVPILQHAQE 765

Query: 321 LNKSLVENSAITLGRIAWVCPQLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCALAK 380
           LNKSLVENSAITLGRIAWVCPQLVSP MEHF+QPWCTALSMIRDDVEKEDAFRGLCAL K
Sbjct: 766 LNKSLVENSAITLGRIAWVCPQLVSPDMEHFIQPWCTALSMIRDDVEKEDAFRGLCALVK 825

Query: 381 SNPSGALSSLAFMCKAITSWHEIRSQDLHNEVCQVLQGYKQMLRNGGWEQCISSLEPSVK 412
           SNPSGA++SL +MC+AI SWHEIRSQDLHNEVCQVL GYKQMLRNGGW+QCISSLEPSVK
Sbjct: 826 SNPSGAVNSLPYMCRAIASWHEIRSQDLHNEVCQVLHGYKQMLRNGGWDQCISSLEPSVK 885

[Close]

BLAST of Carg16158 vs. ExPASy TrEMBL
Match: A0A6J1G8E6 (transportin-1-like OS=Cucurbita moschata OX=3662 GN=LOC111451780 PE=4 SV=1)

HSP 1 Score: 709.1 bits (1829), Expect = 1.0e-200
Identity = 362/429 (84.38%), Postives = 377/429 (87.88%), Query Frame = 0


Query: 21  VPNGIGTQQGYEQFDKVLMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLKNILH 80
           +  GI  Q+GYEQFDKVLMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHL+NIL 
Sbjct: 464 IVQGIENQKGYEQFDKVLMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLENILQ 523

Query: 81  HLICAFGKYQRRNLRIVYDAIGTLADAVGGELN--------------------------- 140
           HL+CAFGKYQRRN RIVYDAIGTLADAVG ELN                           
Sbjct: 524 HLVCAFGKYQRRNQRIVYDAIGTLADAVGAELNQPAYLDVLMPPLIAKWQQLSNSDKDLF 583

Query: 141 ----------QALGTGFAQFAQPVYQRCISIIQTQQMAKVDPVSAGVQYDKEFIVCCLDL 200
                     QALG GFAQFAQPV+QRCISIIQTQQMAKV+P SAGVQYDKEFIVCCLDL
Sbjct: 584 PLLECFTSIAQALGAGFAQFAQPVFQRCISIIQTQQMAKVNPASAGVQYDKEFIVCCLDL 643

Query: 201 LSGLAEGLGSGIESLVSQSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLQPRLS 260
           LSGLAEGLGSG+ESLVSQSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHL PRLS
Sbjct: 644 LSGLAEGLGSGVESLVSQSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLLPRLS 703

Query: 261 EFLTAAAKQLDTPKLRDIVSVANNACWAIGELAVKVHQDISPVVMTVISSLVPILQHAQE 320
           EFLTAAAKQLDTPKL++IVSVANNACWAIGELA+KVHQ+ISPVVMTVISSLVPILQHAQE
Sbjct: 704 EFLTAAAKQLDTPKLKEIVSVANNACWAIGELAIKVHQEISPVVMTVISSLVPILQHAQE 763

Query: 321 LNKSLVENSAITLGRIAWVCPQLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCALAK 380
           LNKSLVENSAITLGRIAWVCPQLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCALAK
Sbjct: 764 LNKSLVENSAITLGRIAWVCPQLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCALAK 823

Query: 381 SNPSGALSSLAFMCKAITSWHEIRSQDLHNEVCQVLQGYKQMLRN-GGWEQCISSLEPSV 412
           SNPSGALSSLA+MCKAI SWHEIRSQDLHNEVCQVL GYKQML N GGW+Q ISSLEPSV
Sbjct: 824 SNPSGALSSLAYMCKAIASWHEIRSQDLHNEVCQVLHGYKQMLINGGGWDQYISSLEPSV 883

[Close]

BLAST of Carg16158 vs. TAIR 10
Match: AT2G16950.1 (transportin 1 )

HSP 1 Score: 561.2 bits (1445), Expect = 6.8e-160
Identity = 284/423 (67.14%), Postives = 331/423 (78.25%), Query Frame = 0


Query: 26  GTQQGYEQFDKVLMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLKNILHHLICA 85
           G  +GYEQF+KVLMGLLRRLLD NKRVQEAACSAFAT+EE+AAEEL PHL  IL HL+CA
Sbjct: 474 GNPKGYEQFEKVLMGLLRRLLDTNKRVQEAACSAFATVEEDAAEELVPHLGVILQHLMCA 533

Query: 86  FGKYQRRNLRIVYDAIGTLADAVGGELN-------------------------------- 145
           FGKYQRRNLRIVYDAIGTLAD+V  ELN                                
Sbjct: 534 FGKYQRRNLRIVYDAIGTLADSVREELNKPAYLEILMPPLVAKWQQLSNSDKDLFPLLEC 593

Query: 146 -----QALGTGFAQFAQPVYQRCISIIQTQQMAKVDPVSAGVQYDKEFIVCCLDLLSGLA 205
                QALG GFA FAQPV+QRC+ IIQ QQ+AKV+P SAG QYD+EFIVC LDLLSGLA
Sbjct: 594 FTSISQALGVGFAPFAQPVFQRCMDIIQLQQLAKVNPASAGAQYDREFIVCSLDLLSGLA 653

Query: 206 EGLGSGIESLVSQSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLQPRLSEFLTA 265
           EGLGSGIESLV QSNLRDLLL CC+DEA+DVRQSAFAL+GDL RV  V+LQPRL +FL  
Sbjct: 654 EGLGSGIESLVQQSNLRDLLLNCCIDEAADVRQSAFALMGDLARVFPVYLQPRLLDFLEI 713

Query: 266 AAKQLDTPKLRDIVSVANNACWAIGELAVKVHQDISPVVMTVISSLVPILQHAQELNKSL 325
           A++QL     R+ +SVANNACWAIGELAVKV Q++SP+V  V+SSL  ILQH + +NK+L
Sbjct: 714 ASQQLSANLNRENLSVANNACWAIGELAVKVRQEVSPIVAKVVSSLGLILQHGEGVNKAL 773

Query: 326 VENSAITLGRIAWVCPQLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCALAKSNPSG 385
           VENSAITLGR+AW+ P LV+PHM+HFM+PWC ALSM+RDD+EKEDAFRGLCA+ K NPSG
Sbjct: 774 VENSAITLGRLAWIRPDLVAPHMDHFMKPWCMALSMVRDDIEKEDAFRGLCAVVKVNPSG 833

Query: 386 ALSSLAFMCKAITSWHEIRSQDLHNEVCQVLQGYKQMLRNGGWEQCISSLEPSVKEKLSK 412
            +SSL F+C+AI SWHEIRS+D+  EV QVL GYK ML N  W +C+S+L+P VKE+L++
Sbjct: 834 GVSSLVFICQAIASWHEIRSEDVQTEVSQVLNGYKHMLGN-SWAECLSALDPPVKERLAR 893

[Close]

BLAST of Carg16158 vs. TAIR 10
Match: AT2G16950.2 (transportin 1 )

HSP 1 Score: 561.2 bits (1445), Expect = 6.8e-160
Identity = 284/423 (67.14%), Postives = 331/423 (78.25%), Query Frame = 0


Query: 26  GTQQGYEQFDKVLMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLKNILHHLICA 85
           G  +GYEQF+KVLMGLLRRLLD NKRVQEAACSAFAT+EE+AAEEL PHL  IL HL+CA
Sbjct: 470 GNPKGYEQFEKVLMGLLRRLLDTNKRVQEAACSAFATVEEDAAEELVPHLGVILQHLMCA 529

Query: 86  FGKYQRRNLRIVYDAIGTLADAVGGELN-------------------------------- 145
           FGKYQRRNLRIVYDAIGTLAD+V  ELN                                
Sbjct: 530 FGKYQRRNLRIVYDAIGTLADSVREELNKPAYLEILMPPLVAKWQQLSNSDKDLFPLLEC 589

Query: 146 -----QALGTGFAQFAQPVYQRCISIIQTQQMAKVDPVSAGVQYDKEFIVCCLDLLSGLA 205
                QALG GFA FAQPV+QRC+ IIQ QQ+AKV+P SAG QYD+EFIVC LDLLSGLA
Sbjct: 590 FTSISQALGVGFAPFAQPVFQRCMDIIQLQQLAKVNPASAGAQYDREFIVCSLDLLSGLA 649

Query: 206 EGLGSGIESLVSQSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLQPRLSEFLTA 265
           EGLGSGIESLV QSNLRDLLL CC+DEA+DVRQSAFAL+GDL RV  V+LQPRL +FL  
Sbjct: 650 EGLGSGIESLVQQSNLRDLLLNCCIDEAADVRQSAFALMGDLARVFPVYLQPRLLDFLEI 709

Query: 266 AAKQLDTPKLRDIVSVANNACWAIGELAVKVHQDISPVVMTVISSLVPILQHAQELNKSL 325
           A++QL     R+ +SVANNACWAIGELAVKV Q++SP+V  V+SSL  ILQH + +NK+L
Sbjct: 710 ASQQLSANLNRENLSVANNACWAIGELAVKVRQEVSPIVAKVVSSLGLILQHGEGVNKAL 769

Query: 326 VENSAITLGRIAWVCPQLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCALAKSNPSG 385
           VENSAITLGR+AW+ P LV+PHM+HFM+PWC ALSM+RDD+EKEDAFRGLCA+ K NPSG
Sbjct: 770 VENSAITLGRLAWIRPDLVAPHMDHFMKPWCMALSMVRDDIEKEDAFRGLCAVVKVNPSG 829

Query: 386 ALSSLAFMCKAITSWHEIRSQDLHNEVCQVLQGYKQMLRNGGWEQCISSLEPSVKEKLSK 412
            +SSL F+C+AI SWHEIRS+D+  EV QVL GYK ML N  W +C+S+L+P VKE+L++
Sbjct: 830 GVSSLVFICQAIASWHEIRSEDVQTEVSQVLNGYKHMLGN-SWAECLSALDPPVKERLAR 889

[Close]

BLAST of Carg16158 vs. TAIR 10
Match: AT2G16960.1 (ARM repeat superfamily protein )

HSP 1 Score: 319.7 bits (818), Expect = 3.4e-87
Identity = 193/444 (43.47%), Postives = 259/444 (58.33%), Query Frame = 0


Query: 34  FDKVLMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLKNILHHLICAFGKYQRRN 93
           F KVL G   +LLD+N  VQEAAC A  T EE+A ++L PHL+ IL  L+ AFGKYQ+RN
Sbjct: 125 FTKVLHGFRFKLLDSNIWVQEAACLALTTFEEDAGDKLVPHLEKILQQLMRAFGKYQKRN 184

Query: 94  LRIVYDAIGTLADAVGGELN-------------------------------------QAL 153
           L+++ DAI  LAD+VG  LN                                     +AL
Sbjct: 185 LKVLLDAIRALADSVGINLNKRAYIKILIPPLVSTLEQISNSDKDVIPLLKCFTSISKAL 244

Query: 154 GTGFAQFAQPVYQRCISIIQTQQMAKVDPVSAGVQYDKEFIVCCLDLLSGLAEGLGSGIE 213
             GFA F+  V++RC+ I+Q QQ+AKVD   AGVQYD+  +VC L+  SGL++GL SGIE
Sbjct: 245 EVGFAPFSWYVFERCMDILQLQQLAKVDHDFAGVQYDQNIVVCSLEFFSGLSKGLVSGIE 304

Query: 214 SLVSQSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLQPRLSEFLTAAAKQLDTP 273
           SLVSQSNLRD+LL+C MDE  DVR+SAFAL      +CH+      S             
Sbjct: 305 SLVSQSNLRDMLLKCFMDETPDVRESAFAL------ICHLTKSANFS------------- 364

Query: 274 KLRDIVSVANNACWAIGELAVK----------------VHQDISPVVMTVISSLVPILQH 333
              + +S ANNAC AIGELAVK                  Q++SP+V  V+ SL  I+Q 
Sbjct: 365 --GENLSAANNACKAIGELAVKFLVKNKLVNDMNSMFQYPQEVSPIVTNVVYSLGMIIQL 424

Query: 334 AQELN----KSLVE--------NSAITLGRIAWVCPQLVSPHMEHFMQPWCTALSMIRDD 393
            + L      +LVE        NSAIT+G +A + P L +  +E+FM+PWC  L+ + DD
Sbjct: 425 GETLELKSLTTLVEYNAIELAMNSAITVGILARIRPDLSARSIENFMKPWCMRLATLDDD 484

Query: 394 VEKEDAFRGLCALAKSNPSGALSSLAFMCKAITSWHEIRSQDLHNEVCQVLQGYKQMLRN 412
             KE+AF+GLC + K NPS  +SS+AF+C AI SW ++ ++ + +E  +VL GYK ML  
Sbjct: 485 STKENAFQGLCEMVKVNPSRYVSSVAFICLAIASWKDMENKVIQSEFSKVLIGYKNMLGK 544

[Close]

BLAST of Carg16158 vs. TAIR 10
Match: AT2G16960.2 (ARM repeat superfamily protein )

HSP 1 Score: 287.7 bits (735), Expect = 1.4e-77
Identity = 172/391 (43.99%), Postives = 243/391 (62.15%), Query Frame = 0


Query: 34  FDKVLMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLKNILHHLICAFGKYQRRN 93
           F KVL G   +LLD+N  VQEAAC A  T EE+A ++L PHL+ IL  L+ AFGKYQ+RN
Sbjct: 142 FTKVLHGFRFKLLDSNIWVQEAACLALTTFEEDAGDKLVPHLEKILQQLMRAFGKYQKRN 201

Query: 94  LRIVYDAIGTLADAVGGELNQALGTGFAQFAQPVYQRCISIIQTQQMAKVDPVSAGVQYD 153
           L+++ DAI  LAD+VG  LN+              +  I I+    ++ ++ +S     D
Sbjct: 202 LKVLLDAIRALADSVGINLNK--------------RAYIKILIPPLVSTLEQIS---NSD 261

Query: 154 KEFIVCCLDLLSGLAEGLGSGIESLVSQSNLRDLLLQCCMDEASDVRQSAFALLGDLGRV 213
           K+ ++  L   + +         S VSQSNLRD+LL+C MDE  DVR+SAFAL+  L +V
Sbjct: 262 KD-VIPLLKCFTSI---------SKVSQSNLRDMLLKCFMDETPDVRESAFALICHLTKV 321

Query: 214 CHVHLQPRLSEFLTAAAKQLDTPKLRDIVSVANNACWAIGELAVKVHQDISPVVMTVISS 273
              +L+PRL EFL  A++QL      + +S ANNAC AIGELAVK  Q++SP+V  V+ S
Sbjct: 322 LPDYLEPRLLEFLEIASQQLSANFSGENLSAANNACKAIGELAVKYPQEVSPIVTNVVYS 381

Query: 274 LVPILQHAQELN----KSLVE--------NSAITLGRIAWVCPQLVSPHMEHFMQPWCTA 333
           L  I+Q  + L      +LVE        NSAIT+G +A + P L +  +E+FM+PWC  
Sbjct: 382 LGMIIQLGETLELKSLTTLVEYNAIELAMNSAITVGILARIRPDLSARSIENFMKPWCMR 441

Query: 334 LSMIRDDVEKEDAFRGLCALAKSNPSGALSSLAFMCKAITSWHEIRSQDLHNEVCQVLQG 393
           L+ + DD  KE+AF+GLC + K NPS  +SS+AF+C AI SW ++ ++ + +E  +VL G
Sbjct: 442 LATLDDDSTKENAFQGLCEMVKVNPSRYVSSVAFICLAIASWKDMENKVIQSEFSKVLIG 501

Query: 394 YKQMLRNGGWEQCISSLEPSVKEKL-SKYQV 412
           YK ML    WE+C+S L+P  KE+L ++YQV
Sbjct: 502 YKNMLGKNSWEECLSVLDPLAKERLAARYQV 505

The following BLAST results are available for this feature:

BLAST of Carg16158 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7010837.1	5.4e-236	100.00	Transportin-1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022944437.1	4.0e-215	90.19	transportin-1-like [Cucurbita moschata]	[more]
KAG6571007.1	6.9e-215	90.19	Transportin-1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023512722.1	7.6e-214	89.72	transportin-1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022985794.1	6.5e-213	89.72	transportin-1-like [Cucurbita maxima]	[more]

BLAST of Carg16158 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B8ARW2	2.4e-162	66.83	Transportin-1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_18044 PE=2 SV=1	[more]
B9FDR3	2.4e-162	66.83	Transportin-1 OS=Oryza sativa subsp. japonica OX=39947 GN=TRN1 PE=3 SV=2	[more]
Q8H0U4	9.5e-159	67.14	Transportin-1 OS=Arabidopsis thaliana OX=3702 GN=TRN1 PE=1 SV=1	[more]
Q99LG2	9.4e-90	42.79	Transportin-2 OS=Mus musculus OX=10090 GN=Tnpo2 PE=1 SV=1	[more]
Q8BFY9	1.5e-87	41.81	Transportin-1 OS=Mus musculus OX=10090 GN=Tnpo1 PE=1 SV=2	[more]

BLAST of Carg16158 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FVN4	2.0e-215	90.19	transportin-1-like OS=Cucurbita moschata OX=3662 GN=LOC111448889 PE=4 SV=1	[more]
A0A6J1JE95	3.1e-213	89.72	transportin-1-like OS=Cucurbita maxima OX=3661 GN=LOC111483737 PE=4 SV=1	[more]
A0A6J1CFY8	6.3e-206	86.45	transportin-1 OS=Momordica charantia OX=3673 GN=LOC111011078 PE=4 SV=1	[more]
A0A1S3C7H5	7.0e-205	85.51	transportin-1 OS=Cucumis melo OX=3656 GN=LOC103497352 PE=4 SV=1	[more]
A0A6J1G8E6	1.0e-200	84.38	transportin-1-like OS=Cucurbita moschata OX=3662 GN=LOC111451780 PE=4 SV=1	[more]

BLAST of Carg16158 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G16950.1	6.8e-160	67.14	transportin 1	[more]
AT2G16950.2	6.8e-160	67.14	transportin 1	[more]
AT2G16960.1	3.4e-87	43.47	ARM repeat superfamily protein	[more]
AT2G16960.2	1.4e-77	43.99	ARM repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 22..411 e-value: 1.9E-152 score: 511.4
IPR000357	HEAT repeat	PFAM	PF02985	HEAT	coord: 186..214 e-value: 4.9E-4 score: 20.1
None	No IPR available	PANTHER	PTHR10527:SF65	TRANSPORTIN 1 ISOFORM 1	coord: 23..115
None	No IPR available	PANTHER	PTHR10527:SF65	TRANSPORTIN 1 ISOFORM 1	coord: 114..409
IPR040122	Importin beta family	PANTHER	PTHR10527	IMPORTIN BETA	coord: 114..409 coord: 23..115
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 32..403

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16158-RA	Carg16158-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006606	protein import into nucleus
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0031267	small GTPase binding
molecular_function	GO:0005515	protein binding