
Carg16120 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGGTACGTACTCAGTTGAAAACATTACTGTTATCGATGAGTTAACTGTTTTCATGTCAAATTTTAACGTTGGTTTTTGCAGCAAAAGATAGCGATTAAAGTATCGATGAAGGAGGGGGCTAAGTATCGTAGCAAAGCCTTGAAGATTGTAGCATCTGTCTCGGGTAAATTATGCATACATATAATATAATCTATTTGAATTTCAATGAATTAAAAGAAATATTATTGAAAAATTATGCAAATTACAGGGAATATTGAGACGATCGGCTTGGTGGGCGATAACAAGGATAAATTAGAGATAGTTGGAGATCTTGACCCGATCAAACTCATCGAGGTGCTCCGAAAGAAATTTAGTTACGCGCAGTTGGAGTCTGTGAGCATAGTTGAAGTCAAGGACAAAGACAAGGACAAAGACGAAGACAAAAATGAACCTGAAATAACTTGGACGTGCTCATGTGGGGTGCCTCATCAAACTCCGTATAGCCATTGTTACCTTAGCCCCTACCCGACCTATGGCATATGGTAA ATGAAGCAAAAGATAGCGATTAAAGTATCGATGAAGGAGGGGGCTAAGTATCGTAGCAAAGCCTTGAAGATTGTAGCATCTGTCTCGGGGAATATTGAGACGATCGGCTTGGTGGGCGATAACAAGGATAAATTAGAGATAGTTGGAGATCTTGACCCGATCAAACTCATCGAGGTGCTCCGAAAGAAATTTAGTTACGCGCAGTTGGAGTCTGTGAGCATAGTTGAAGTCAAGGACAAAGACAAGGACAAAGACGAAGACAAAAATGAACCTGAAATAACTTGGACGTGCTCATGTGGGGTGCCTCATCAAACTCCGTATAGCCATTGTTACCTTAGCCCCTACCCGACCTATGGCATATGGTAA ATGAAGCAAAAGATAGCGATTAAAGTATCGATGAAGGAGGGGGCTAAGTATCGTAGCAAAGCCTTGAAGATTGTAGCATCTGTCTCGGGGAATATTGAGACGATCGGCTTGGTGGGCGATAACAAGGATAAATTAGAGATAGTTGGAGATCTTGACCCGATCAAACTCATCGAGGTGCTCCGAAAGAAATTTAGTTACGCGCAGTTGGAGTCTGTGAGCATAGTTGAAGTCAAGGACAAAGACAAGGACAAAGACGAAGACAAAAATGAACCTGAAATAACTTGGACGTGCTCATGTGGGGTGCCTCATCAAACTCCGTATAGCCATTGTTACCTTAGCCCCTACCCGACCTATGGCATATGGTAA MKQKIAIKVSMKEGAKYRSKALKIVASVSGNIETIGLVGDNKDKLEIVGDLDPIKLIEVLRKKFSYAQLESVSIVEVKDKDKDKDEDKNEPEITWTCSCGVPHQTPYSHCYLSPYPTYGIW Homology
BLAST of Carg16120 vs. NCBI nr
Match: KAG7010799.1 (Heavy metal-associated isoprenylated plant protein 16, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 242.3 bits (617), Expect = 2.2e-60 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
BLAST of Carg16120 vs. NCBI nr
Match: XP_022944684.1 (uncharacterized protein LOC111449070 [Cucurbita moschata]) HSP 1 Score: 231.5 bits (589), Expect = 3.9e-57 Identity = 116/121 (95.87%), Postives = 118/121 (97.52%), Query Frame = 0
BLAST of Carg16120 vs. NCBI nr
Match: XP_022987042.1 (uncharacterized protein LOC111484603 [Cucurbita maxima]) HSP 1 Score: 184.1 bits (466), Expect = 7.1e-43 Identity = 91/125 (72.80%), Postives = 109/125 (87.20%), Query Frame = 0
BLAST of Carg16120 vs. NCBI nr
Match: KAG7010798.1 (Heavy metal-associated isoprenylated plant protein 46, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 181.0 bits (458), Expect = 6.0e-42 Identity = 90/123 (73.17%), Postives = 106/123 (86.18%), Query Frame = 0
BLAST of Carg16120 vs. NCBI nr
Match: XP_022944683.1 (uncharacterized protein LOC111449069 [Cucurbita moschata]) HSP 1 Score: 180.3 bits (456), Expect = 1.0e-41 Identity = 89/123 (72.36%), Postives = 106/123 (86.18%), Query Frame = 0
BLAST of Carg16120 vs. ExPASy Swiss-Prot
Match: Q9SSF0 (Heavy metal-associated isoprenylated plant protein 16 OS=Arabidopsis thaliana OX=3702 GN=HIPP16 PE=2 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.3e-07 Identity = 47/132 (35.61%), Postives = 73/132 (55.30%), Query Frame = 0
BLAST of Carg16120 vs. ExPASy Swiss-Prot
Match: F7J0N2 (Disease resistance protein RGA5 OS=Oryza sativa subsp. japonica OX=39947 GN=RGA5 PE=1 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 1.9e-06 Identity = 31/76 (40.79%), Postives = 54/76 (71.05%), Query Frame = 0
BLAST of Carg16120 vs. ExPASy Swiss-Prot
Match: Q5PNZ7 (Heavy metal-associated isoprenylated plant protein 46 OS=Arabidopsis thaliana OX=3702 GN=HIPP46 PE=2 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 3.2e-06 Identity = 33/85 (38.82%), Postives = 57/85 (67.06%), Query Frame = 0
BLAST of Carg16120 vs. ExPASy TrEMBL
Match: A0A6J1FX50 (uncharacterized protein LOC111449070 OS=Cucurbita moschata OX=3662 GN=LOC111449070 PE=4 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 1.9e-57 Identity = 116/121 (95.87%), Postives = 118/121 (97.52%), Query Frame = 0
BLAST of Carg16120 vs. ExPASy TrEMBL
Match: A0A6J1J992 (uncharacterized protein LOC111484603 OS=Cucurbita maxima OX=3661 GN=LOC111484603 PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 3.4e-43 Identity = 91/125 (72.80%), Postives = 109/125 (87.20%), Query Frame = 0
BLAST of Carg16120 vs. ExPASy TrEMBL
Match: A0A6J1FYA9 (uncharacterized protein LOC111449069 OS=Cucurbita moschata OX=3662 GN=LOC111449069 PE=4 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 5.0e-42 Identity = 89/123 (72.36%), Postives = 106/123 (86.18%), Query Frame = 0
BLAST of Carg16120 vs. ExPASy TrEMBL
Match: A0A1S3BIE5 (uncharacterized protein LOC103490424 OS=Cucumis melo OX=3656 GN=LOC103490424 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 4.5e-35 Identity = 82/121 (67.77%), Postives = 99/121 (81.82%), Query Frame = 0
BLAST of Carg16120 vs. ExPASy TrEMBL
Match: A0A0A0KAU7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G113600 PE=4 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 1.0e-34 Identity = 83/122 (68.03%), Postives = 96/122 (78.69%), Query Frame = 0
BLAST of Carg16120 vs. TAIR 10
Match: AT3G07600.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 57.4 bits (137), Expect = 9.3e-09 Identity = 47/132 (35.61%), Postives = 73/132 (55.30%), Query Frame = 0
BLAST of Carg16120 vs. TAIR 10
Match: AT5G48290.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 52.8 bits (125), Expect = 2.3e-07 Identity = 33/85 (38.82%), Postives = 57/85 (67.06%), Query Frame = 0
BLAST of Carg16120 vs. TAIR 10
Match: AT5G48290.2 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 44.3 bits (103), Expect = 8.2e-05 Identity = 25/70 (35.71%), Postives = 46/70 (65.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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