Carg15945 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg15945
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr08: 7279735 .. 7280101 (+)
RNA-Seq ExpressionCarg15945
SyntenyCarg15945
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGATTCACGGTTATTATAACTTTAAAATACTATTATAGCTTGAGAAACGGTTATTTTGCATAATTTAGTTTTTTTTTTTTTTTTTTTAAATATAGAAAAATCCGTTGGTTGTGATTTATGCAAAGGAGATGGAAGGCTGAGATTTGGCACAAACAAAACAGGGGAATTTGAAATGCCACGTGTCAAAAACTCAAAAGACAAGAACAGATTTTCCCGGGAAAATTACAACTCCTCAAATGGTCGCCGTTGTTCATTACAGAATGACGTACAACTTGAGCGAATATGCAAATTTAAATCCGAGTATGGAGCACCAAATTTCGGAGATCAATCAAGAATACTAGCTACGTTGGAAATGGCGATTTGA

mRNA sequence

ATGAGATTCACGGTTATTATAACTTTAAAATACTATTATAGCTTGAGAAACGAAAAATCCGTTGGTTGTGATTTATGCAAAGGAGATGGAAGGCTGAGATTTGGCACAAACAAAACAGGGGAATTTGAAATGCCACGTGTCAAAAACTCAAAAGACAAGAACAGATTTTCCCGGGAAAATTACAACTCCTCAAATGGTCGCCGTTGTTCATTACAGAATGACGTACAACTTGAGCGAATATGCAAATTTAAATCCGAGTATGGAGCACCAAATTTCGGAGATCAATCAAGAATACTAGCTACGTTGGAAATGGCGATTTGA

Coding sequence (CDS)

ATGAGATTCACGGTTATTATAACTTTAAAATACTATTATAGCTTGAGAAACGAAAAATCCGTTGGTTGTGATTTATGCAAAGGAGATGGAAGGCTGAGATTTGGCACAAACAAAACAGGGGAATTTGAAATGCCACGTGTCAAAAACTCAAAAGACAAGAACAGATTTTCCCGGGAAAATTACAACTCCTCAAATGGTCGCCGTTGTTCATTACAGAATGACGTACAACTTGAGCGAATATGCAAATTTAAATCCGAGTATGGAGCACCAAATTTCGGAGATCAATCAAGAATACTAGCTACGTTGGAAATGGCGATTTGA

Protein sequence

MRFTVIITLKYYYSLRNEKSVGCDLCKGDGRLRFGTNKTGEFEMPRVKNSKDKNRFSRENYNSSNGRRCSLQNDVQLERICKFKSEYGAPNFGDQSRILATLEMAI
Homology
[Close]
BLAST of Carg15945 vs. NCBI nr
Match: KAG7026276.1 (hypothetical protein SDJN02_12776, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 218.8 bits (556), Expect = 2.3e-53
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0 

Query: 1   MRFTVIITLKYYYSLRNEKSVGCDLCKGDGRLRFGTNKTGEFEMPRVKNSKDKNRFSREN 60
           MRFTVIITLKYYYSLRNEKSVGCDLCKGDGRLRFGTNKTGEFEMPRVKNSKDKNRFSREN
Sbjct: 1   MRFTVIITLKYYYSLRNEKSVGCDLCKGDGRLRFGTNKTGEFEMPRVKNSKDKNRFSREN 60

Query: 61  YNSSNGRRCSLQNDVQLERICKFKSEYGAPNFGDQSRILATLEMAI 107
           YNSSNGRRCSLQNDVQLERICKFKSEYGAPNFGDQSRILATLEMAI
Sbjct: 61  YNSSNGRRCSLQNDVQLERICKFKSEYGAPNFGDQSRILATLEMAI 106

The following BLAST results are available for this feature:
BLAST of Carg15945 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7026276.12.3e-53100.00hypothetical protein SDJN02_12776, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Carg15945 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg15945 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg15945 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg15945-RACarg15945-RAmRNA