Carg15936 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTGTGCCAATGAGCTAAGCAGTATTAACAAGACAGTAAGCACACATCATGAACAACAACTTAGTCTCACGCATAAGGACACACAACTTTTTTACGGCTTTACAACATTACAAGGATTAAAGCTAACAAACATACGGTTTGGACAGTTAGCTTGCGAGTTAAACAACTGAGAGATGGATAAAAATCACGTATAAAGTACATCAAGATAAATATGATATTATAAACAAAGACACTAGACTGATTATAATCTACGCTCAGTCATAAAGATATTTTAATTGTTGATTAATAAGAGGAGAGTAGTGCACTTATTGACAGAGAGAAGGATTATGTGCATTCCTGAAAGCACTAATTTTGACCTCAGCTGTTGTTTCTTCCTTAACTGGGTACACATTCTGGGCCTCAAAGAAGGGCAAAGATTTCAGCTATCTTGGACCGTTTTTGTTTACCGCACTAATGATCCTCCTCCTCACTAGCTTCATTCAGGTCATTTACTGCCCCTTCACTACTACTTCATAGTCAACAGTGGTTCTAGTGACTCTACTTCTATATTTTTTACTAGCACCTTGTCAATGCCAGGAGGGGATCCAGAAAATTTTATATGGAGGGGTAGAAATTTTACAATTTAGCTTAGCTTAATCTAGTGGGAAAAGTTGAGAGAACTTTAAAATCTTATGTTCCGTTCGATAACCATATGTTTAGTTTTTGGACTTCGAAAATTAAGCTTATAAACACGAGCACTACTCGTGTTTGTTTGTTCTGCTACTTTTTACAAGGGTTTCTAAAGTTCATGTTAAAGTTTTGAAATCTAAAGAACTAGTTCTTAAGAACTTGTTTTTGTTTTTCAAATGTTTCGTTTAAAAACGATGAAAACCTCAGTAAACGAACGACATAATTTTCAAAAACTAAATGGTTATAGAACAGAACTATTTTATATAATTTTCTTAACCAATTGTCCTTCTTCCTTTGCTTGGAATTTGTTCTAACAGAACATCGATTGAATCATTAACAACATTATCTTAATAACTCAAAAGTGTATGCTATGTTGTTTTGTATCGTAGGCATTCTTCCCTCTGGGTCCTACTTCCACAGCAGTTTACGGTGGAATTGGTGCGATAATTTTCTCGGGTTACATTATATATGATACGGACAATCTGATCAAGCGTTTTACATATGATGATTACATATGGGCTGCAGTCACTCTGTATCTAGATATCCTGAACTTGTTCCTGACCATTTTGCGGATGCTGAGACAGGGAGACAACTAG ATGGATTGTGCCAATGAGCTAAGCAGTATTAACAAGACAAGAGAAGGATTATGTGCATTCCTGAAAGCACTAATTTTGACCTCAGCTGTTGTTTCTTCCTTAACTGGGTACACATTCTGGGCCTCAAAGAAGGGCAAAGATTTCAGCTATCTTGGACCGTTTTTGTTTACCGCACTAATGATCCTCCTCCTCACTAGCTTCATTCAGGCATTCTTCCCTCTGGGTCCTACTTCCACAGCAGTTTACGGTGGAATTGGTGCGATAATTTTCTCGGGTTACATTATATATGATACGGACAATCTGATCAAGCGTTTTACATATGATGATTACATATGGGCTGCAGTCACTCTGTATCTAGATATCCTGAACTTGTTCCTGACCATTTTGCGGATGCTGAGACAGGGAGACAACTAG ATGGATTGTGCCAATGAGCTAAGCAGTATTAACAAGACAAGAGAAGGATTATGTGCATTCCTGAAAGCACTAATTTTGACCTCAGCTGTTGTTTCTTCCTTAACTGGGTACACATTCTGGGCCTCAAAGAAGGGCAAAGATTTCAGCTATCTTGGACCGTTTTTGTTTACCGCACTAATGATCCTCCTCCTCACTAGCTTCATTCAGGCATTCTTCCCTCTGGGTCCTACTTCCACAGCAGTTTACGGTGGAATTGGTGCGATAATTTTCTCGGGTTACATTATATATGATACGGACAATCTGATCAAGCGTTTTACATATGATGATTACATATGGGCTGCAGTCACTCTGTATCTAGATATCCTGAACTTGTTCCTGACCATTTTGCGGATGCTGAGACAGGGAGACAACTAG MDCANELSSINKTREGLCAFLKALILTSAVVSSLTGYTFWASKKGKDFSYLGPFLFTALMILLLTSFIQAFFPLGPTSTAVYGGIGAIIFSGYIIYDTDNLIKRFTYDDYIWAAVTLYLDILNLFLTILRMLRQGDN Homology
BLAST of Carg15936 vs. NCBI nr
Match: KAG7026267.1 (BI1-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 270.0 bits (689), Expect = 1.1e-68 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0
BLAST of Carg15936 vs. NCBI nr
Match: XP_022930516.1 (BI1-like protein [Cucurbita moschata] >XP_023515113.1 BI1-like protein [Cucurbita pepo subsp. pepo] >KAG6593926.1 BI1-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 227.6 bits (579), Expect = 6.3e-56 Identity = 116/117 (99.15%), Postives = 117/117 (100.00%), Query Frame = 0
BLAST of Carg15936 vs. NCBI nr
Match: XP_023000165.1 (BI1-like protein [Cucurbita maxima]) HSP 1 Score: 227.6 bits (579), Expect = 6.3e-56 Identity = 116/117 (99.15%), Postives = 117/117 (100.00%), Query Frame = 0
BLAST of Carg15936 vs. NCBI nr
Match: XP_038875969.1 (BI1-like protein [Benincasa hispida]) HSP 1 Score: 227.3 bits (578), Expect = 8.3e-56 Identity = 115/117 (98.29%), Postives = 117/117 (100.00%), Query Frame = 0
BLAST of Carg15936 vs. NCBI nr
Match: XP_004153426.1 (BI1-like protein [Cucumis sativus] >XP_008458536.1 PREDICTED: BI1-like protein [Cucumis melo] >KGN46165.1 hypothetical protein Csa_005017 [Cucumis sativus]) HSP 1 Score: 227.3 bits (578), Expect = 8.3e-56 Identity = 115/117 (98.29%), Postives = 117/117 (100.00%), Query Frame = 0
BLAST of Carg15936 vs. ExPASy Swiss-Prot
Match: Q94A20 (BI1-like protein OS=Arabidopsis thaliana OX=3702 GN=LFG5 PE=2 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 7.3e-47 Identity = 92/117 (78.63%), Postives = 106/117 (90.60%), Query Frame = 0
BLAST of Carg15936 vs. ExPASy Swiss-Prot
Match: Q9SA63 (Protein LIFEGUARD 4 OS=Arabidopsis thaliana OX=3702 GN=LFG4 PE=2 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 8.9e-37 Identity = 77/125 (61.60%), Postives = 98/125 (78.40%), Query Frame = 0
BLAST of Carg15936 vs. ExPASy Swiss-Prot
Match: Q9M1V9 (Protein LIFEGUARD 2 OS=Arabidopsis thaliana OX=3702 GN=LFG2 PE=2 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 2.0e-36 Identity = 75/126 (59.52%), Postives = 101/126 (80.16%), Query Frame = 0
BLAST of Carg15936 vs. ExPASy Swiss-Prot
Match: Q9ZQX7 (Protein LIFEGUARD 3 OS=Arabidopsis thaliana OX=3702 GN=LFG3 PE=2 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 1.1e-34 Identity = 76/122 (62.30%), Postives = 95/122 (77.87%), Query Frame = 0
BLAST of Carg15936 vs. ExPASy Swiss-Prot
Match: F4JIE8 (Protein LIFEGUARD 1 OS=Arabidopsis thaliana OX=3702 GN=LFG1 PE=2 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 2.4e-29 Identity = 62/112 (55.36%), Postives = 88/112 (78.57%), Query Frame = 0
BLAST of Carg15936 vs. ExPASy TrEMBL
Match: A0A6J1KHK7 (BI1-like protein OS=Cucurbita maxima OX=3661 GN=LOC111494450 PE=3 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 3.1e-56 Identity = 116/117 (99.15%), Postives = 117/117 (100.00%), Query Frame = 0
BLAST of Carg15936 vs. ExPASy TrEMBL
Match: A0A6J1ER46 (BI1-like protein OS=Cucurbita moschata OX=3662 GN=LOC111436947 PE=3 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 3.1e-56 Identity = 116/117 (99.15%), Postives = 117/117 (100.00%), Query Frame = 0
BLAST of Carg15936 vs. ExPASy TrEMBL
Match: A0A5A7SW80 (BI1-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00940 PE=3 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 4.0e-56 Identity = 115/117 (98.29%), Postives = 117/117 (100.00%), Query Frame = 0
BLAST of Carg15936 vs. ExPASy TrEMBL
Match: A0A0A0K8T5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G061760 PE=3 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 4.0e-56 Identity = 115/117 (98.29%), Postives = 117/117 (100.00%), Query Frame = 0
BLAST of Carg15936 vs. ExPASy TrEMBL
Match: A0A1S3C867 (BI1-like protein OS=Cucumis melo OX=3656 GN=LOC103497913 PE=3 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 4.0e-56 Identity = 115/117 (98.29%), Postives = 117/117 (100.00%), Query Frame = 0
BLAST of Carg15936 vs. TAIR 10
Match: AT4G15470.1 (Bax inhibitor-1 family protein ) HSP 1 Score: 188.0 bits (476), Expect = 5.2e-48 Identity = 92/117 (78.63%), Postives = 106/117 (90.60%), Query Frame = 0
BLAST of Carg15936 vs. TAIR 10
Match: AT1G03070.1 (Bax inhibitor-1 family protein ) HSP 1 Score: 154.5 bits (389), Expect = 6.4e-38 Identity = 77/125 (61.60%), Postives = 98/125 (78.40%), Query Frame = 0
BLAST of Carg15936 vs. TAIR 10
Match: AT1G03070.2 (Bax inhibitor-1 family protein ) HSP 1 Score: 154.5 bits (389), Expect = 6.4e-38 Identity = 77/125 (61.60%), Postives = 98/125 (78.40%), Query Frame = 0
BLAST of Carg15936 vs. TAIR 10
Match: AT3G63310.1 (Bax inhibitor-1 family protein ) HSP 1 Score: 153.3 bits (386), Expect = 1.4e-37 Identity = 75/126 (59.52%), Postives = 101/126 (80.16%), Query Frame = 0
BLAST of Carg15936 vs. TAIR 10
Match: AT4G02690.1 (Bax inhibitor-1 family protein ) HSP 1 Score: 147.5 bits (371), Expect = 7.8e-36 Identity = 76/122 (62.30%), Postives = 95/122 (77.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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