Homology
BLAST of Carg15930 vs. NCBI nr
Match:
XP_023006214.1 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Cucurbita maxima])
HSP 1 Score: 260.0 bits (663), Expect = 1.9e-65
Identity = 135/205 (65.85%), Postives = 156/205 (76.10%), Query Frame = 0
Query: 34 GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVT 93
GYVKLR+L+NAR LFDKMP+RGCVS+TTMILGL+QNDCW E F VAPNEVT
Sbjct: 135 GYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDCWREAIEIFKDMRSAGVAPNEVT 194
Query: 94 MASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLLYMYCVCPSLKDARRLFRAMS 153
+ASVMS CSH+GGIWNC ML+ALV+KLHF+ VLIST LL+MYCVC SLKDARRLF M
Sbjct: 195 IASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVCSSLKDARRLFNEMP 254
Query: 154 VHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREAL---- 213
V N S WNV+LKGYVK+GLVD+A ELF+ K++ISWATMID +VQVKQLREAL
Sbjct: 255 VRNTVS-WNVMLKGYVKSGLVDKAIELFDRIPEKDVISWATMIDGFVQVKQLREALSMFS 314
Query: 214 ------------MIIDLASACGQAV 216
MI+DL SACGQ++
Sbjct: 315 AMRKSDLHPNEVMIVDLLSACGQSI 338
BLAST of Carg15930 vs. NCBI nr
Match:
XP_022959003.1 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Cucurbita moschata])
HSP 1 Score: 259.6 bits (662), Expect = 2.5e-65
Identity = 134/205 (65.37%), Postives = 157/205 (76.59%), Query Frame = 0
Query: 34 GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVT 93
GYVKLR+L+NARQLFDKMP+RGCVS+TTMILGL+QNDCW E F VAPNEVT
Sbjct: 135 GYVKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEIFKDMRSAGVAPNEVT 194
Query: 94 MASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLLYMYCVCPSLKDARRLFRAMS 153
+ASVMS CSH+GGIWNC ML+ALV+KLHF+ VLIST LL+MYCVC SLKDARRLF M
Sbjct: 195 IASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVCSSLKDARRLFNEMP 254
Query: 154 VHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREAL---- 213
+ N S WNV+LKGYVK+GLVD+A ELF+ +++ISWATMID +VQVKQLREAL
Sbjct: 255 MRNTVS-WNVMLKGYVKSGLVDKAIELFDRIPERDVISWATMIDGFVQVKQLREALSMFS 314
Query: 214 ------------MIIDLASACGQAV 216
MI+DL SACGQ++
Sbjct: 315 AMRKSDLHPNEVMIVDLLSACGQSI 338
BLAST of Carg15930 vs. NCBI nr
Match:
KAG7013592.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 257.7 bits (657), Expect = 9.5e-65
Identity = 134/205 (65.37%), Postives = 155/205 (75.61%), Query Frame = 0
Query: 34 GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVT 93
GYVKLR+L+NAR LFDKMP+RGCVS+TTMILGL+QNDCW E F VAPNEVT
Sbjct: 135 GYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDCWREAIEIFKDMRSAGVAPNEVT 194
Query: 94 MASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLLYMYCVCPSLKDARRLFRAMS 153
+ASVMS CSH+GGIWNC ML+ALV+KLHF+ VLIST LL+MYCVC S KDARRLF M
Sbjct: 195 IASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVCSSSKDARRLFNEMP 254
Query: 154 VHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREAL---- 213
V N S WNV+LKGYVK+GLVD+A ELF+ K++ISWATMID +VQVKQLREAL
Sbjct: 255 VRNTVS-WNVMLKGYVKSGLVDKAIELFDRIPEKDVISWATMIDGFVQVKQLREALLMFS 314
Query: 214 ------------MIIDLASACGQAV 216
MI+DL SACGQ++
Sbjct: 315 AMRKGDLHPNEVMIVDLLSACGQSI 338
BLAST of Carg15930 vs. NCBI nr
Match:
KAG6575019.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 257.7 bits (657), Expect = 9.5e-65
Identity = 134/205 (65.37%), Postives = 155/205 (75.61%), Query Frame = 0
Query: 34 GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVT 93
GYVKLR+L+NAR LFDKMP+RGCVS+TTMILGL+QNDCW E F VAPNEVT
Sbjct: 135 GYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDCWREAIEIFKDMRSAGVAPNEVT 194
Query: 94 MASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLLYMYCVCPSLKDARRLFRAMS 153
+ASVMS CSH+GGIWNC ML+ALV+KLHF+ VLIST LL+MYCVC S KDARRLF M
Sbjct: 195 IASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVCSSSKDARRLFNEMP 254
Query: 154 VHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREAL---- 213
V N S WNV+LKGYVK+GLVD+A ELF+ K++ISWATMID +VQVKQLREAL
Sbjct: 255 VRNTVS-WNVMLKGYVKSGLVDKAIELFDRIPEKDVISWATMIDGFVQVKQLREALLMFS 314
Query: 214 ------------MIIDLASACGQAV 216
MI+DL SACGQ++
Sbjct: 315 AMRKGDLHPNEVMIVDLLSACGQSI 338
BLAST of Carg15930 vs. NCBI nr
Match:
XP_023548174.1 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Cucurbita pepo subsp. pepo])
HSP 1 Score: 256.5 bits (654), Expect = 2.1e-64
Identity = 133/205 (64.88%), Postives = 156/205 (76.10%), Query Frame = 0
Query: 34 GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVT 93
GYVKLR+L+NARQLFDKMP+RGCVS+TTMILGL+QNDCW E F VAPNEVT
Sbjct: 135 GYVKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEIFKDMRSAGVAPNEVT 194
Query: 94 MASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLLYMYCVCPSLKDARRLFRAMS 153
+ASVMS CSH+GGIWNC ML+ALV+KLHF+ VLIST LL+MYCVC SLKDARRLF M
Sbjct: 195 IASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVCSSLKDARRLFNEMP 254
Query: 154 VHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREAL---- 213
V N S WNV+LKGYVK+ LVD+A ELF+ +++ISWATMID +V+VKQLREAL
Sbjct: 255 VRNTVS-WNVMLKGYVKSDLVDKAIELFDRIPERDVISWATMIDGFVRVKQLREALLMFS 314
Query: 214 ------------MIIDLASACGQAV 216
MI+DL SACGQ++
Sbjct: 315 AMRKSDLHPNEVMIVDLLSACGQSI 338
BLAST of Carg15930 vs. ExPASy Swiss-Prot
Match:
P0C8Q8 (Pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E42 PE=2 SV=1)
HSP 1 Score: 182.6 bits (462), Expect = 5.1e-45
Identity = 93/186 (50.00%), Postives = 126/186 (67.74%), Query Frame = 0
Query: 34 GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVT 93
GYV+ R L +A +LFD MP+R CVS+TT+I G +QN+ WSE F +L + NEVT
Sbjct: 116 GYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVT 175
Query: 94 MASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLLYMYCVCPSLKDARRLFRAMS 153
+A+V+S CSH+GGIW+C ML +L +KL V +ST LL+MYC+C LKDAR+LF M
Sbjct: 176 LATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMP 235
Query: 154 VHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREALMIID 213
N+ TWNV+L GY KAGL+++A ELF+ K+++SW TMID ++ QL EAL+
Sbjct: 236 ERNLV-TWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYT 295
BLAST of Carg15930 vs. ExPASy Swiss-Prot
Match:
Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)
HSP 1 Score: 90.1 bits (222), Expect = 3.4e-17
Identity = 56/177 (31.64%), Postives = 96/177 (54.24%), Query Frame = 0
Query: 34 GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSEFSHHHDLSVAPNEVTMASV 93
GYV+ R L AR+LF+ MP+R S+ TM+ G +QN C + D N+V+ ++
Sbjct: 135 GYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNAL 194
Query: 94 MSDCSHMGGIWNCWMLNALVVKLHFVSHVLIS-TTLLYMYCVCPSLKDARRLFRAMSVHN 153
+S + N M A ++ + L+S LL + + +AR+ F +M+V +
Sbjct: 195 LS-----AYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRD 254
Query: 154 VASTWNVILKGYVKAGLVDEARELFES---KEMISWATMIDEYVQVKQLREALMIID 207
V S WN I+ GY ++G +DEAR+LF+ +++ +W M+ Y+Q + + EA + D
Sbjct: 255 VVS-WNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFD 305
BLAST of Carg15930 vs. ExPASy Swiss-Prot
Match:
Q9SUH6 (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX=3702 GN=DYW9 PE=2 SV=1)
HSP 1 Score: 89.4 bits (220), Expect = 5.9e-17
Identity = 60/176 (34.09%), Postives = 90/176 (51.14%), Query Frame = 0
Query: 7 VMEVLPMAGCCL-IRVLSWILYVVTLCCGYVKLRELDNARQLFDKMPDRGCVSFTTMILG 66
+M + + G CL LS L Y KL E+++AR+LFD+ P++ S+ MI G
Sbjct: 335 LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISG 394
Query: 67 LSQN----DCWSEFSHHHDLSVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSH 126
+QN D S F +PN VT+ ++S C+ +G + ++ LV F S
Sbjct: 395 YTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESS 454
Query: 127 VLISTTLLYMYCVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELF 178
+ +ST L+ MY C S+ +ARRLF M+ N TWN ++ GY G EA +F
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDLMTKKNEV-TWNTMISGYGLHGQGQEALNIF 509
BLAST of Carg15930 vs. ExPASy Swiss-Prot
Match:
Q9ZUT4 (Pentatricopeptide repeat-containing protein At2g37320 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E50 PE=2 SV=1)
HSP 1 Score: 89.0 bits (219), Expect = 7.6e-17
Identity = 50/143 (34.97%), Postives = 82/143 (57.34%), Query Frame = 0
Query: 40 ELDNARQLFDKMPDRGCVSFTTMILGLSQ----NDCWSEFSHHHDLSVAPNEVTMASVMS 99
E++NA ++F++MP+R VS+T MI G +Q + C +S + PN+ T +++S
Sbjct: 170 EVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLS 229
Query: 100 DCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLLYMYCVCPSLKDARRLFRAMSVHNVAS 159
C+ G + ++ + + S++ IS +L+ MYC C LKDA R+F S +V S
Sbjct: 230 ACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVS 289
Query: 160 TWNVILKGYVKAGLVDEARELFE 179
WN ++ GY + GL +A ELFE
Sbjct: 290 -WNSMIAGYAQHGLAMQAIELFE 311
BLAST of Carg15930 vs. ExPASy Swiss-Prot
Match:
Q9CA54 (Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H71 PE=2 SV=1)
HSP 1 Score: 85.9 bits (211), Expect = 6.5e-16
Identity = 59/201 (29.35%), Postives = 99/201 (49.25%), Query Frame = 0
Query: 31 LCCGYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE-FSHHHDL---SVAPN 90
+ GY+K EL++A+++F +MP R VS++TMI+G++ N ++E F + +L ++PN
Sbjct: 209 MLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPN 268
Query: 91 EVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLLYMYCVCPSLKDARRLFR 150
EV++ V+S CS G +L+ V K + V ++ L+ MY C ++ AR +F
Sbjct: 269 EVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFE 328
Query: 151 AMSVHNVASTWNVILKGYVKAGLVDEARELFESKEMISWATMIDEYVQVKQLREALMIID 210
M +W ++ G G +EA LF EM ++ D + I
Sbjct: 329 GMQEKRCIVSWTSMIAGLAMHGQGEEAVRLF--NEMTAYGVTPD----------GISFIS 388
Query: 211 LASACGQAVPFYCGFLKEHND 228
L AC A G ++E D
Sbjct: 389 LLHACSHA-----GLIEEGED 392
BLAST of Carg15930 vs. ExPASy TrEMBL
Match:
A0A6J1L1I9 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111499011 PE=4 SV=1)
HSP 1 Score: 260.0 bits (663), Expect = 9.3e-66
Identity = 135/205 (65.85%), Postives = 156/205 (76.10%), Query Frame = 0
Query: 34 GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVT 93
GYVKLR+L+NAR LFDKMP+RGCVS+TTMILGL+QNDCW E F VAPNEVT
Sbjct: 135 GYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDCWREAIEIFKDMRSAGVAPNEVT 194
Query: 94 MASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLLYMYCVCPSLKDARRLFRAMS 153
+ASVMS CSH+GGIWNC ML+ALV+KLHF+ VLIST LL+MYCVC SLKDARRLF M
Sbjct: 195 IASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVCSSLKDARRLFNEMP 254
Query: 154 VHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREAL---- 213
V N S WNV+LKGYVK+GLVD+A ELF+ K++ISWATMID +VQVKQLREAL
Sbjct: 255 VRNTVS-WNVMLKGYVKSGLVDKAIELFDRIPEKDVISWATMIDGFVQVKQLREALSMFS 314
Query: 214 ------------MIIDLASACGQAV 216
MI+DL SACGQ++
Sbjct: 315 AMRKSDLHPNEVMIVDLLSACGQSI 338
BLAST of Carg15930 vs. ExPASy TrEMBL
Match:
A0A6J1H4P4 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111460125 PE=4 SV=1)
HSP 1 Score: 259.6 bits (662), Expect = 1.2e-65
Identity = 134/205 (65.37%), Postives = 157/205 (76.59%), Query Frame = 0
Query: 34 GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVT 93
GYVKLR+L+NARQLFDKMP+RGCVS+TTMILGL+QNDCW E F VAPNEVT
Sbjct: 135 GYVKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEIFKDMRSAGVAPNEVT 194
Query: 94 MASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLLYMYCVCPSLKDARRLFRAMS 153
+ASVMS CSH+GGIWNC ML+ALV+KLHF+ VLIST LL+MYCVC SLKDARRLF M
Sbjct: 195 IASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVCSSLKDARRLFNEMP 254
Query: 154 VHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREAL---- 213
+ N S WNV+LKGYVK+GLVD+A ELF+ +++ISWATMID +VQVKQLREAL
Sbjct: 255 MRNTVS-WNVMLKGYVKSGLVDKAIELFDRIPERDVISWATMIDGFVQVKQLREALSMFS 314
Query: 214 ------------MIIDLASACGQAV 216
MI+DL SACGQ++
Sbjct: 315 AMRKSDLHPNEVMIVDLLSACGQSI 338
BLAST of Carg15930 vs. ExPASy TrEMBL
Match:
A0A1S4E227 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497919 PE=4 SV=1)
HSP 1 Score: 251.9 bits (642), Expect = 2.5e-63
Identity = 131/205 (63.90%), Postives = 154/205 (75.12%), Query Frame = 0
Query: 34 GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVT 93
GY+KLR+L+NARQLF KMP+RGCVS+TTMILGL+QNDCW E F VAPNEVT
Sbjct: 136 GYIKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRSAGVAPNEVT 195
Query: 94 MASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLLYMYCVCPSLKDARRLFRAMS 153
MASVMS CSH+GGIWNC ML+ALV+KLHF VLIST LL+MYCV SLKDA+RLF M
Sbjct: 196 MASVMSACSHIGGIWNCCMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKDAKRLFNEMP 255
Query: 154 VHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREAL---- 213
V N S WNV+LKGYVK+GLVD+ARELFE +++ SWATMID +VQ+K+LREAL
Sbjct: 256 VRNTVS-WNVMLKGYVKSGLVDQARELFERIPERDVFSWATMIDGFVQMKRLREALLLYS 315
Query: 214 ------------MIIDLASACGQAV 216
+I+DL SACGQ+V
Sbjct: 316 AMRKSDFHPNEVLIVDLLSACGQSV 339
BLAST of Carg15930 vs. ExPASy TrEMBL
Match:
A0A1S4E229 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497919 PE=4 SV=1)
HSP 1 Score: 251.9 bits (642), Expect = 2.5e-63
Identity = 131/205 (63.90%), Postives = 154/205 (75.12%), Query Frame = 0
Query: 34 GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVT 93
GY+KLR+L+NARQLF KMP+RGCVS+TTMILGL+QNDCW E F VAPNEVT
Sbjct: 113 GYIKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRSAGVAPNEVT 172
Query: 94 MASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLLYMYCVCPSLKDARRLFRAMS 153
MASVMS CSH+GGIWNC ML+ALV+KLHF VLIST LL+MYCV SLKDA+RLF M
Sbjct: 173 MASVMSACSHIGGIWNCCMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKDAKRLFNEMP 232
Query: 154 VHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREAL---- 213
V N S WNV+LKGYVK+GLVD+ARELFE +++ SWATMID +VQ+K+LREAL
Sbjct: 233 VRNTVS-WNVMLKGYVKSGLVDQARELFERIPERDVFSWATMIDGFVQMKRLREALLLYS 292
Query: 214 ------------MIIDLASACGQAV 216
+I+DL SACGQ+V
Sbjct: 293 AMRKSDFHPNEVLIVDLLSACGQSV 316
BLAST of Carg15930 vs. ExPASy TrEMBL
Match:
A0A1S3C877 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial isoform X3 OS=Cucumis melo OX=3656 GN=LOC103497919 PE=4 SV=1)
HSP 1 Score: 251.9 bits (642), Expect = 2.5e-63
Identity = 131/205 (63.90%), Postives = 154/205 (75.12%), Query Frame = 0
Query: 34 GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVT 93
GY+KLR+L+NARQLF KMP+RGCVS+TTMILGL+QNDCW E F VAPNEVT
Sbjct: 136 GYIKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRSAGVAPNEVT 195
Query: 94 MASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLLYMYCVCPSLKDARRLFRAMS 153
MASVMS CSH+GGIWNC ML+ALV+KLHF VLIST LL+MYCV SLKDA+RLF M
Sbjct: 196 MASVMSACSHIGGIWNCCMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKDAKRLFNEMP 255
Query: 154 VHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREAL---- 213
V N S WNV+LKGYVK+GLVD+ARELFE +++ SWATMID +VQ+K+LREAL
Sbjct: 256 VRNTVS-WNVMLKGYVKSGLVDQARELFERIPERDVFSWATMIDGFVQMKRLREALLLYS 315
Query: 214 ------------MIIDLASACGQAV 216
+I+DL SACGQ+V
Sbjct: 316 AMRKSDFHPNEVLIVDLLSACGQSV 339
BLAST of Carg15930 vs. TAIR 10
Match:
AT5G19020.1 (mitochondrial editing factor 18 )
HSP 1 Score: 182.6 bits (462), Expect = 3.6e-46
Identity = 93/186 (50.00%), Postives = 126/186 (67.74%), Query Frame = 0
Query: 34 GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVT 93
GYV+ R L +A +LFD MP+R CVS+TT+I G +QN+ WSE F +L + NEVT
Sbjct: 116 GYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVT 175
Query: 94 MASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLLYMYCVCPSLKDARRLFRAMS 153
+A+V+S CSH+GGIW+C ML +L +KL V +ST LL+MYC+C LKDAR+LF M
Sbjct: 176 LATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMP 235
Query: 154 VHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREALMIID 213
N+ TWNV+L GY KAGL+++A ELF+ K+++SW TMID ++ QL EAL+
Sbjct: 236 ERNLV-TWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYT 295
BLAST of Carg15930 vs. TAIR 10
Match:
AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 90.1 bits (222), Expect = 2.4e-18
Identity = 56/177 (31.64%), Postives = 96/177 (54.24%), Query Frame = 0
Query: 34 GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSEFSHHHDLSVAPNEVTMASV 93
GYV+ R L AR+LF+ MP+R S+ TM+ G +QN C + D N+V+ ++
Sbjct: 135 GYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNAL 194
Query: 94 MSDCSHMGGIWNCWMLNALVVKLHFVSHVLIS-TTLLYMYCVCPSLKDARRLFRAMSVHN 153
+S + N M A ++ + L+S LL + + +AR+ F +M+V +
Sbjct: 195 LS-----AYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRD 254
Query: 154 VASTWNVILKGYVKAGLVDEARELFES---KEMISWATMIDEYVQVKQLREALMIID 207
V S WN I+ GY ++G +DEAR+LF+ +++ +W M+ Y+Q + + EA + D
Sbjct: 255 VVS-WNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFD 305
BLAST of Carg15930 vs. TAIR 10
Match:
AT4G30700.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 89.4 bits (220), Expect = 4.2e-18
Identity = 60/176 (34.09%), Postives = 90/176 (51.14%), Query Frame = 0
Query: 7 VMEVLPMAGCCL-IRVLSWILYVVTLCCGYVKLRELDNARQLFDKMPDRGCVSFTTMILG 66
+M + + G CL LS L Y KL E+++AR+LFD+ P++ S+ MI G
Sbjct: 335 LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISG 394
Query: 67 LSQN----DCWSEFSHHHDLSVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSH 126
+QN D S F +PN VT+ ++S C+ +G + ++ LV F S
Sbjct: 395 YTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESS 454
Query: 127 VLISTTLLYMYCVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELF 178
+ +ST L+ MY C S+ +ARRLF M+ N TWN ++ GY G EA +F
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDLMTKKNEV-TWNTMISGYGLHGQGQEALNIF 509
BLAST of Carg15930 vs. TAIR 10
Match:
AT2G37320.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 89.0 bits (219), Expect = 5.4e-18
Identity = 50/143 (34.97%), Postives = 82/143 (57.34%), Query Frame = 0
Query: 40 ELDNARQLFDKMPDRGCVSFTTMILGLSQ----NDCWSEFSHHHDLSVAPNEVTMASVMS 99
E++NA ++F++MP+R VS+T MI G +Q + C +S + PN+ T +++S
Sbjct: 170 EVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLS 229
Query: 100 DCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLLYMYCVCPSLKDARRLFRAMSVHNVAS 159
C+ G + ++ + + S++ IS +L+ MYC C LKDA R+F S +V S
Sbjct: 230 ACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVS 289
Query: 160 TWNVILKGYVKAGLVDEARELFE 179
WN ++ GY + GL +A ELFE
Sbjct: 290 -WNSMIAGYAQHGLAMQAIELFE 311
BLAST of Carg15930 vs. TAIR 10
Match:
AT1G74630.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 85.9 bits (211), Expect = 4.6e-17
Identity = 59/201 (29.35%), Postives = 99/201 (49.25%), Query Frame = 0
Query: 31 LCCGYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE-FSHHHDL---SVAPN 90
+ GY+K EL++A+++F +MP R VS++TMI+G++ N ++E F + +L ++PN
Sbjct: 209 MLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPN 268
Query: 91 EVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLLYMYCVCPSLKDARRLFR 150
EV++ V+S CS G +L+ V K + V ++ L+ MY C ++ AR +F
Sbjct: 269 EVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFE 328
Query: 151 AMSVHNVASTWNVILKGYVKAGLVDEARELFESKEMISWATMIDEYVQVKQLREALMIID 210
M +W ++ G G +EA LF EM ++ D + I
Sbjct: 329 GMQEKRCIVSWTSMIAGLAMHGQGEEAVRLF--NEMTAYGVTPD----------GISFIS 388
Query: 211 LASACGQAVPFYCGFLKEHND 228
L AC A G ++E D
Sbjct: 389 LLHACSHA-----GLIEEGED 392
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023006214.1 | 1.9e-65 | 65.85 | pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Cucurbita ... | [more] |
XP_022959003.1 | 2.5e-65 | 65.37 | pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Cucurbita ... | [more] |
KAG7013592.1 | 9.5e-65 | 65.37 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
KAG6575019.1 | 9.5e-65 | 65.37 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
XP_023548174.1 | 2.1e-64 | 64.88 | pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Cucurbita ... | [more] |
Match Name | E-value | Identity | Description | |
P0C8Q8 | 5.1e-45 | 50.00 | Pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Arabidop... | [more] |
Q9SY02 | 3.4e-17 | 31.64 | Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX... | [more] |
Q9SUH6 | 5.9e-17 | 34.09 | Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX... | [more] |
Q9ZUT4 | 7.6e-17 | 34.97 | Pentatricopeptide repeat-containing protein At2g37320 OS=Arabidopsis thaliana OX... | [more] |
Q9CA54 | 6.5e-16 | 29.35 | Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1L1I9 | 9.3e-66 | 65.85 | pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Cucurbit... | [more] |
A0A6J1H4P4 | 1.2e-65 | 65.37 | pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Cucurbit... | [more] |
A0A1S4E227 | 2.5e-63 | 63.90 | pentatricopeptide repeat-containing protein At5g19020, mitochondrial isoform X1 ... | [more] |
A0A1S4E229 | 2.5e-63 | 63.90 | pentatricopeptide repeat-containing protein At5g19020, mitochondrial isoform X2 ... | [more] |
A0A1S3C877 | 2.5e-63 | 63.90 | pentatricopeptide repeat-containing protein At5g19020, mitochondrial isoform X3 ... | [more] |
Match Name | E-value | Identity | Description | |
AT5G19020.1 | 3.6e-46 | 50.00 | mitochondrial editing factor 18 | [more] |
AT4G02750.1 | 2.4e-18 | 31.64 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G30700.1 | 4.2e-18 | 34.09 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT2G37320.1 | 5.4e-18 | 34.97 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G74630.1 | 4.6e-17 | 29.35 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |